Lsi03G022430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G022430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein TIC 56, chloroplastic
Location	chr03: 33428928 .. 33433425 (+)
RNA-Seq Expression	Lsi03G022430
Synteny	Lsi03G022430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCTCCTTCACTCTTCATGTTCTGTCCCCGACTCCTCCGCCAGACCTCCATTTTCAGCCGGGTCGATCAGCTTATGCTTCGGTCCGAAACCCTACTCGAATCGCCTGAAGTCTTAGCATTTTACTATCCGATTGACCTTCTTGAAGCCAGAGTTTTGTCTCAGTTATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATTCCTCCCCACAATCTCATCGCATTTAGAGACTCGTTATCTCAAAAATCCTCAACATCCCCAAATTTTGCTTCAACGAGCCTCTCAAATGTCTTCAAGAAGCCGCAGAAACCAGAGAAAGCATCCGATGAACCAGGGTATTACGGCAAAATGCTAGAACAATTCTACTGGGAATGCGACAATTTACCCGACTACAGACACGCTCCCGAGGTTGAGAAAATATTGAGCGAAGATCCTGTTTTTGAGAACAAAGAGAATCCTACCCAAGAGGAGCTCGAAAAGAACGAGAAGCTCTGGAAAGCGGTGCGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGCAGCCAAGTACAATGAACTGGAGCTCAAAGAAAACGAGAATCCATACAGAGATGAGGACAAGAAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGCCCTATGCCGAGGAAAGCAATAAAGACGAAAAGAGAATCCGATGACAAGTTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGGCAAAGACCTTATCCACCTGGTCGCCCGATTGATGTTGCTCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTGTAAGTCTTAATTGGTGTGGTTATTTGAAGAATGTGGTCTGATTTTCCATTTACCCAATTTTGCCTTAAGCTAAATTGAGCTGCGGAAGCCACATTGACATGGGCTATCTCAGTTTCATCACGATACGGGCTCATATTAGAACTGTTATGTTCTTCTGTCCAAGTTTCTTAGATCTTCACTTCATCACTTTGGTGCTAAATCGTAAAAAGTATTAGACAGGCACTTTGGTTTTACTTTTACACTGTTTGATATACCTGTATGATCTACGTTTCAATCTTCTTTGATCAGCATCATGAAGTTGCTTCGTCATTCGAAAGCGCTTTCCTAGTCTTGTCTTGTATTCATGGTTTTTAGTATGATTGGTCTGACTATGCAGTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTACTCTGAAAACAGCATGGGGAGGTGGGATTATTGACAAGGATACATTTATATGGGGGGAGGACATGGACGAATGGGCACCAATTCATATGGTTTACGGATTGGAGCGTGCAATTGCCACTTGGGAAGGTCAGTCAAGCTTCCATGTTTATCTTTTCATTTGTTTTGGCAGGTATGAAGTTGAAGGTTACCATTATACTGGGTACCAAGAAATTTACCCTGAAGTTGTAGCATCAATTATTGTATGCTCAGTGTTTTAAGAAGCCCTCCGGGCGTGCTCCTAGGCTCAAGGCCCTGGTCCGGCGCCTCGCCTTGAAAAGGCAAGGCTCACAAAGGAGCGCGCCTAAAGTCTTGGGGCTTTTTTATTATTTTAAAAATAAAGTAATAATTAGAGGGTTCCTTCTTTATTAAATATAAAATATCAGAATTACTATGCCTAAATGCAAAATTTCTTGTATTTAGGGTTTTTTTTTTCTCCTCATATTTCCACTTCAACTATGCCTTCTCTTTTTTATGTATTACTTTTATATATAGAATGTCTCACGGAAAAAAAGCCGTTTTTTTTTGCGCCTTGCGCTTAAGTCCCAAAAGACTATTGCACTTTATTGTGCCTTGAGCTTTAAAAAACACTTTGTATGCTTAATTTGAGCCCTACTTATTATTAATCTTTAAGTAGATGAACACATGACATGACAGTTCAAGATGGAGCTTTCCTTTTAGTTTATTGAAGATATATCCCGAATCAAATTAGGACATGCTTCCTTTCCTTCAAGTTTATTATAGCTACATCGTGACAATCAAACTTTAAACATAACATGTGATGAGCAAACATTTGCAGTGCATCTAGATGCTCATTTTGGCGGACACAACAGCCTCTAATTGGTTGCTTCCTGCTCTGATGATTGATGTAGGAGTTTATTATCATCTGGGTTTCCAGCAGAGAGGAACAAAAGATCATTTATTCACGTGTTCTTAAACTGTAGTTGGAATTAGTAAAGATAAATAAGCTCCCGAATACACCTGCTTACATTCTAGAATGTGGTGTACAGCACCAGTAGAGTTTAGAACGAGTTCAAATGACACCGTATCCTAATCACTGTCCAGTTATAGCCATGTTTCATTAAGTTGTTAGCACTATAGAAGCTCAGTGAGGGCGGATTGGATAGCACAAATACTTTTTGTGCCTTTTCTCATCTCTACAAACATTTGGAAAACTCGCTAAGCTAGACGCCATATATAGAAAAACATTAAATCCACAGTCAATATCACTCAAATTGGTACTTACTTTATTTGTGATTAGCTGCCTTCTTTAACGCAGTTCCTATTTTTGTATGTTACATCTCATTTATTGTTCCCGCCATCCCCTGTTCGACTTCGGCCCATCTAGTTGATTTATAAACAGATGGCATGTTGACGATCTTGTTCCAAAGTGGTTTACTGGCTCACGGTTGTTTATACAGTTAGACTTGGTGCTGCTGCCACTGCTCTTCTTCACAAATTGCAGAAGGGCATACCTCCATGGGTTCCTCTTAAGGGACAAGAGAAGAAAACCTACAAGCAACTGCAACAGGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGTGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGATCTGAGCTGACATCTACTTTGGAGGCAGATCACATGCCAAATAAGTACATCCCTAGGGATCTAAGGTATGTGCCTAAACTCCACATTCTATTCATTAAGTCTCTATTGTCTTAAGTACAACCACTGTAGTCGTCAATTATAAGTCCATGGTGGTCATTTTAAGACAATGACACTTGAGAGACTCGTGGTAAAGTCACCGATGATTAAAAATCAAGTTGGTTGGCAAATGTATATTCTATACACTTTAAATAAGACCGTACCGTCACAGTCTAGTAAAAGCTGAGGATGTCCTCAGGCTAGTTATTTGTTTTTCATCTATGGAGGAAATATGGAGGAAATAAGAAAGTTCATTTCCCATGAATAGTTCATTTCCCATTAATAGTTCATTCCATTGCCGAGGAAGTGCCCTTAACATTGGCCGTTACAGTAACCTTTTTGGATATATAATCTAACTTTGGAGATCTCTTCTTTATTAGATTCGGATATTTATGTTGTGGTTGTTGCCTGTGGTATGACAGGTATAAATTAGCTAAAATTATACCTGGGTTAAGACCATGGGAGGTTCTAAGCGTTGAGCAAGCAATGGAACAGATAACATATAATGGCGAATGGCAACGCGAACCTCTTGGGACATACACAACTGGTCCTCCCTACATCAGGCATTGGAATAAAGATGTCAAGGTACAGTACTTACTACGTACACATCCTTACAAGTTTGCTGATCTTGAATTGGCCCCTGAAAATAGGAAAAAAGAGAAACCATATAGATATATGTTTATGATGTTGTTATGAAACTTTTGCAATTTTCTATTTGCTATAGTTGCATAAAAATCCTCTACTCACTTTGCTTCAGTTTAATTTTGAATCTGGACAAGGGTAATCATGTTGAGTAACGAAACCTCGGTCCCTTTCTTGCAGAGAATGTTTAGGATATTCTTCAACCTCAGCACTAGAGTTTACAATAAAATGGAGCGGACTATTCCTGGTTTCCGTAAAATAATGGAGAAGGTTCAGGCTGATGCTGCCGCCAGAGATGCTAGGCGGAAGGATAGGAGGGAGGCGATGAACCGAGCTGAATACGAGAGAAAGATCTTCGGCGGGGTCAGAACCGATCGATAGATTATTATTCTCTAATAGCGTTGCTAGTTAAGAAGTGATTAAGGGAGTGATTTTTGTGTAAACTTGATTGTAGTTTTCACATGTAGGTGAGTGGCCTTCCTCTTCTGAATTGGATTAGGAAACTCAGATCCTTACCGGCAAAAAAAACACCATTTTGGGTTCTTTTTGTAACATTTGAGTAGAGTTTTTCAAGGATAATTGTAAAGTAAATCATCATTAGTTTCACATAAAGACAATGGCCATTAAGTTTGCACAAAATGCTTTGGATAGCTGAGAATCTCACACTGACCTGCATACCACAATGTGAAGTGGTTATCTAATATTTCAAGTTTCAAGGACAACTAACATGTAAATTATTAGTGGTTATAAATTTGAAATTCATTTTTGGTCTCTGT

mRNA sequence

CGCCTCCTTCACTCTTCATGTTCTGTCCCCGACTCCTCCGCCAGACCTCCATTTTCAGCCGGGTCGATCAGCTTATGCTTCGGTCCGAAACCCTACTCGAATCGCCTGAAGTCTTAGCATTTTACTATCCGATTGACCTTCTTGAAGCCAGAGTTTTGTCTCAGTTATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATTCCTCCCCACAATCTCATCGCATTTAGAGACTCGTTATCTCAAAAATCCTCAACATCCCCAAATTTTGCTTCAACGAGCCTCTCAAATGTCTTCAAGAAGCCGCAGAAACCAGAGAAAGCATCCGATGAACCAGGGTATTACGGCAAAATGCTAGAACAATTCTACTGGGAATGCGACAATTTACCCGACTACAGACACGCTCCCGAGGTTGAGAAAATATTGAGCGAAGATCCTGTTTTTGAGAACAAAGAGAATCCTACCCAAGAGGAGCTCGAAAAGAACGAGAAGCTCTGGAAAGCGGTGCGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGCAGCCAAGTACAATGAACTGGAGCTCAAAGAAAACGAGAATCCATACAGAGATGAGGACAAGAAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGCCCTATGCCGAGGAAAGCAATAAAGACGAAAAGAGAATCCGATGACAAGTTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGGCAAAGACCTTATCCACCTGGTCGCCCGATTGATGTTGCTCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTACTCTGAAAACAGCATGGGGAGGTGGGATTATTGACAAGGATACATTTATATGGGGGGAGGACATGGACGAATGGGCACCAATTCATATGGTTTACGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTAGACTTGGTGCTGCTGCCACTGCTCTTCTTCACAAATTGCAGAAGGGCATACCTCCATGGGTTCCTCTTAAGGGACAAGAGAAGAAAACCTACAAGCAACTGCAACAGGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGTGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGATCTGAGCTGACATCTACTTTGGAGGCAGATCACATGCCAAATAAGTACATCCCTAGGGATCTAAGGTATAAATTAGCTAAAATTATACCTGGGTTAAGACCATGGGAGGTTCTAAGCGTTGAGCAAGCAATGGAACAGATAACATATAATGGCGAATGGCAACGCGAACCTCTTGGGACATACACAACTGGTCCTCCCTACATCAGGCATTGGAATAAAGATGTCAAGAGAATGTTTAGGATATTCTTCAACCTCAGCACTAGAGTTTACAATAAAATGGAGCGGACTATTCCTGGTTTCCGTAAAATAATGGAGAAGGTTCAGGCTGATGCTGCCGCCAGAGATGCTAGGCGGAAGGATAGGAGGGAGGCGATGAACCGAGCTGAATACGAGAGAAAGATCTTCGGCGGGGTCAGAACCGATCGATAGATTATTATTCTCTAATAGCGTTGCTAGTTAAGAAGTGATTAAGGGAGTGATTTTTGTGTAAACTTGATTGTAGTTTTCACATGTAGGTGAGTGGCCTTCCTCTTCTGAATTGGATTAGGAAACTCAGATCCTTACCGGCAAAAAAAACACCATTTTGGGTTCTTTTTGTAACATTTGAGTAGAGTTTTTCAAGGATAATTGTAAAGTAAATCATCATTAGTTTCACATAAAGACAATGGCCATTAAGTTTGCACAAAATGCTTTGGATAGCTGAGAATCTCACACTGACCTGCATACCACAATGTGAAGTGGTTATCTAATATTTCAAGTTTCAAGGACAACTAACATGTAAATTATTAGTGGTTATAAATTTGAAATTCATTTTTGGTCTCTGT

Coding sequence (CDS)

ATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATTCCTCCCCACAATCTCATCGCATTTAGAGACTCGTTATCTCAAAAATCCTCAACATCCCCAAATTTTGCTTCAACGAGCCTCTCAAATGTCTTCAAGAAGCCGCAGAAACCAGAGAAAGCATCCGATGAACCAGGGTATTACGGCAAAATGCTAGAACAATTCTACTGGGAATGCGACAATTTACCCGACTACAGACACGCTCCCGAGGTTGAGAAAATATTGAGCGAAGATCCTGTTTTTGAGAACAAAGAGAATCCTACCCAAGAGGAGCTCGAAAAGAACGAGAAGCTCTGGAAAGCGGTGCGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGCAGCCAAGTACAATGAACTGGAGCTCAAAGAAAACGAGAATCCATACAGAGATGAGGACAAGAAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGCCCTATGCCGAGGAAAGCAATAAAGACGAAAAGAGAATCCGATGACAAGTTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGGCAAAGACCTTATCCACCTGGTCGCCCGATTGATGTTGCTCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTACTCTGAAAACAGCATGGGGAGGTGGGATTATTGACAAGGATACATTTATATGGGGGGAGGACATGGACGAATGGGCACCAATTCATATGGTTTACGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTAGACTTGGTGCTGCTGCCACTGCTCTTCTTCACAAATTGCAGAAGGGCATACCTCCATGGGTTCCTCTTAAGGGACAAGAGAAGAAAACCTACAAGCAACTGCAACAGGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGTGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGATCTGAGCTGACATCTACTTTGGAGGCAGATCACATGCCAAATAAGTACATCCCTAGGGATCTAAGGTATAAATTAGCTAAAATTATACCTGGGTTAAGACCATGGGAGGTTCTAAGCGTTGAGCAAGCAATGGAACAGATAACATATAATGGCGAATGGCAACGCGAACCTCTTGGGACATACACAACTGGTCCTCCCTACATCAGGCATTGGAATAAAGATGTCAAGAGAATGTTTAGGATATTCTTCAACCTCAGCACTAGAGTTTACAATAAAATGGAGCGGACTATTCCTGGTTTCCGTAAAATAATGGAGAAGGTTCAGGCTGATGCTGCCGCCAGAGATGCTAGGCGGAAGGATAGGAGGGAGGCGATGAACCGAGCTGAATACGAGAGAAAGATCTTCGGCGGGGTCAGAACCGATCGATAG

Protein sequence

MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKASDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKAVRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIKTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYNGEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQADAAARDARRKDRREAMNRAEYERKIFGGVRTDR

Homology

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BLAST of Lsi03G022430 vs. ExPASy Swiss-Prot
Match: Q7Y1W1 (Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 5.6e-225
Identity = 371/512 (72.46%), Postives = 429/512 (83.79%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M+S+NFNPF+NWF + PNP+P  N ++  DS   KS  SPNFAS  L    KK  KPE A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60

Query: 61  -SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWK 120
            +DEPG Y ++ EQF WEC+N+PDYRH PEV+K+L+EDPVFE KENP+ EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 AVRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAI 180
           + R SPVVQF+ RAEEIA   N++EL++N+ PYR EDK  WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGW 240
           K+K ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
           LGAAATA LHKLQKGIPPWVPLKG+E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITY 420
           PSHALFLWASGSELT+ LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAM+QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQA 480
            GEW REPLGTYTTGPPYIR WN+ V R+FRIF+NLS RV  K+ERT+PGF  IM+KVQ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DAAARDARRKDRREAMNRAEYERKIFGGVRTD 512
           D   R ARR  RRE   R E + K + G RTD
Sbjct: 481 DYDKRIARRMKRREEELREE-DLKHYSG-RTD 509

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BLAST of Lsi03G022430 vs. ExPASy TrEMBL
Match: A0A6J1CXB7 (protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 1.1e-289
Identity = 480/512 (93.75%), Postives = 496/512 (96.88%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           MASINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFASTSLSN FKK QKP+KA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           SDEPGYYGKMLEQF+WECDNLPDYRH PEVEKIL+EDPV +NKENP++EE+EKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTS LEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW REPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGF KIM+KVQAD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTDR 513
           AAARDARRK+RREA+ RAE+ER IFG V+ D+
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKDQ 512

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BLAST of Lsi03G022430 vs. ExPASy TrEMBL
Match: A0A5D3DMT8 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500 PE=4 SV=1)

HSP 1 Score: 938.7 bits (2425), Expect = 1.0e-269
Identity = 444/511 (86.89%), Postives = 475/511 (92.95%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++RR+A  RAE +RKIF  +R D
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRND 625

[Close]

BLAST of Lsi03G022430 vs. ExPASy TrEMBL
Match: A0A1S3B5J8 (protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1)

HSP 1 Score: 938.7 bits (2425), Expect = 1.0e-269
Identity = 444/511 (86.89%), Postives = 475/511 (92.95%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 1   MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 61  TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++RR+A  RAE +RKIF  +R D
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRND 511

[Close]

BLAST of Lsi03G022430 vs. ExPASy TrEMBL
Match: A0A5A7TQS2 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005560 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 5.0e-269
Identity = 443/511 (86.69%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++R +A  RAE +RKIF  +R D
Sbjct: 595 RNARYRRRRERSKARRRAELKRKIFVKLRND 625

[Close]

BLAST of Lsi03G022430 vs. ExPASy TrEMBL
Match: A0A6J1J5K7 (protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.4e-265
Identity = 433/503 (86.08%), Postives = 475/503 (94.43%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           MASINFNPFENWFSRRPNPI P NLIAFRDSLSQKSSTSPNFAS +LSNVFKK +KPE+A
Sbjct: 1   MASINFNPFENWFSRRPNPISPLNLIAFRDSLSQKSSTSPNFASITLSNVFKKQKKPEEA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
            ++PGYY +ML+QFYWEC+NLPDYRH PEVEKILSEDPVFE KENPT+EELEKNEKLWKA
Sbjct: 61  PEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEKNEKLWKA 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAE+IAAKYNE+ELKENENPYR ED+KLWRAIPHV GLDGRPMPRKAIK
Sbjct: 121 IRDSPVVQFLERAEKIAAKYNEIELKENENPYRREDRKLWRAIPHVTGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T++ESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYKRLE+RYYDFIM+SGGWY
Sbjct: 181 TRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWG GIIDKDTFIWGEDMDEWAPIHMVYG+ERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGSGIIDKDTFIWGEDMDEWAPIHMVYGMERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA +HKLQ+GIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVR P
Sbjct: 301 GAAATAFIHKLQRGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRTP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG+ELT+ LEADHMPNKYIPRDLRYKLAKI+PGLRPWEVLSVEQAM+QITY+
Sbjct: 361 SHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQAMDQITYS 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           G+W RE LG+YTTGPPYIRHWN DVKR+ R+F NLS RVY+++ER IPGF K++EK QAD
Sbjct: 421 GKWHRERLGSYTTGPPYIRHWNDDVKRLLRLFSNLSARVYSRLERRIPGFDKVVEKAQAD 480

Query: 481 AAARDARRKDRREAMNRAEYERK 504
           AAAR A R ++R+A+ R++YER+
Sbjct: 481 AAARRAARLEKRKALKRSKYERR 503

[Close]

BLAST of Lsi03G022430 vs. NCBI nr
Match: XP_038905710.1 (protein TIC 56, chloroplastic [Benincasa hispida])

HSP 1 Score: 1024.6 bits (2648), Expect = 2.9e-295
Identity = 492/512 (96.09%), Postives = 499/512 (97.46%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           MASINFNPFENWFSRRPNPIP HNLIAFRDSLSQKSS SPNFAS SLSNVFKK QKPEKA
Sbjct: 1   MASINFNPFENWFSRRPNPIPSHNLIAFRDSLSQKSSPSPNFASRSLSNVFKKRQKPEKA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           SDEPGYYGKMLEQFYWEC+NLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWK 
Sbjct: 61  SDEPGYYGKMLEQFYWECENLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKG 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVV+FLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVKFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW REPLGTYTTGPPYIRHWNKDVKRMFR FF+LSTRVYNKMERTIPGF KIMEKVQ D
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRTFFSLSTRVYNKMERTIPGFSKIMEKVQGD 480

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTDR 513
           AAAR+ARRK+RREAM RAE+ERKIFG VR DR
Sbjct: 481 AAARNARRKERREAMKRAEFERKIFGEVRNDR 512

[Close]

BLAST of Lsi03G022430 vs. NCBI nr
Match: XP_022145657.1 (protein TIC 56, chloroplastic [Momordica charantia])

HSP 1 Score: 1005.0 bits (2597), Expect = 2.4e-289
Identity = 480/512 (93.75%), Postives = 496/512 (96.88%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           MASINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFASTSLSN FKK QKP+KA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           SDEPGYYGKMLEQF+WECDNLPDYRH PEVEKIL+EDPV +NKENP++EE+EKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTS LEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW REPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGF KIM+KVQAD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTDR 513
           AAARDARRK+RREA+ RAE+ER IFG V+ D+
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKDQ 512

[Close]

BLAST of Lsi03G022430 vs. NCBI nr
Match: TYK24935.1 (protein TIC 56 [Cucumis melo var. makuwa])

HSP 1 Score: 938.7 bits (2425), Expect = 2.1e-269
Identity = 444/511 (86.89%), Postives = 475/511 (92.95%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++RR+A  RAE +RKIF  +R D
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRND 625

[Close]

BLAST of Lsi03G022430 vs. NCBI nr
Match: XP_008442373.1 (PREDICTED: protein TIC 56, chloroplastic [Cucumis melo])

HSP 1 Score: 938.7 bits (2425), Expect = 2.1e-269
Identity = 444/511 (86.89%), Postives = 475/511 (92.95%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 1   MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 61  TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++RR+A  RAE +RKIF  +R D
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRND 511

[Close]

BLAST of Lsi03G022430 vs. NCBI nr
Match: KAA0044197.1 (protein TIC 56 [Cucumis melo var. makuwa])

HSP 1 Score: 936.4 bits (2419), Expect = 1.0e-268
Identity = 443/511 (86.69%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M SINFNPFENWFSRRPNPIPP NL AFRDSLSQKSSTSPNFAS SLSN+FK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKA 120
           +DEPGYYGKMLEQFYWECDNLPDYRH PEVEKILSEDPVFENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 VRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +RDSPVVQFLERAEEIAAKYNELELK NENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATA LHKLQKGIPPWVPLKG+EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQAD 480
           GEW RE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+MEK++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKDRREAMNRAEYERKIFGGVRTD 512
             AR  RR++R +A  RAE +RKIF  +R D
Sbjct: 595 RNARYRRRRERSKARRRAELKRKIFVKLRND 625

[Close]

BLAST of Lsi03G022430 vs. TAIR 10
Match: AT5G01590.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 781.6 bits (2017), Expect = 4.0e-226
Identity = 371/512 (72.46%), Postives = 429/512 (83.79%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPHNLIAFRDSLSQKSSTSPNFASTSLSNVFKKPQKPEKA 60
           M+S+NFNPF+NWF + PNP+P  N ++  DS   KS  SPNFAS  L    KK  KPE A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60

Query: 61  -SDEPGYYGKMLEQFYWECDNLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWK 120
            +DEPG Y ++ EQF WEC+N+PDYRH PEV+K+L+EDPVFE KENP+ EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 AVRDSPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAI 180
           + R SPVVQF+ RAEEIA   N++EL++N+ PYR EDK  WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGW 240
           K+K ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATALLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
           LGAAATA LHKLQKGIPPWVPLKG+E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITY 420
           PSHALFLWASGSELT+ LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAM+QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWQREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFRKIMEKVQA 480
            GEW REPLGTYTTGPPYIR WN+ V R+FRIF+NLS RV  K+ERT+PGF  IM+KVQ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DAAARDARRKDRREAMNRAEYERKIFGGVRTD 512
           D   R ARR  RRE   R E + K + G RTD
Sbjct: 481 DYDKRIARRMKRREEELREE-DLKHYSG-RTD 509

The following BLAST results are available for this feature:

BLAST of Lsi03G022430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y1W1	5.6e-225	72.46	Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1	[more]

BLAST of Lsi03G022430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB7	1.1e-289	93.75	protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=...	[more]
A0A5D3DMT8	1.0e-269	86.89	Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500...	[more]
A0A1S3B5J8	1.0e-269	86.89	protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1	[more]
A0A5A7TQS2	5.0e-269	86.69	Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00556...	[more]
A0A6J1J5K7	3.4e-265	86.08	protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 S...	[more]

BLAST of Lsi03G022430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905710.1	2.9e-295	96.09	protein TIC 56, chloroplastic [Benincasa hispida]	[more]
XP_022145657.1	2.4e-289	93.75	protein TIC 56, chloroplastic [Momordica charantia]	[more]
TYK24935.1	2.1e-269	86.89	protein TIC 56 [Cucumis melo var. makuwa]	[more]
XP_008442373.1	2.1e-269	86.89	PREDICTED: protein TIC 56, chloroplastic [Cucumis melo]	[more]
KAA0044197.1	1.0e-268	86.69	protein TIC 56 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi03G022430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01590.1	4.0e-226	72.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..64
IPR025640	GYF domain 2	PFAM	PF14237	GYF_2	coord: 239..289 e-value: 1.3E-10 score: 40.9
IPR037471	Protein TIC56	PANTHER	PTHR37755	PROTEIN TIC 56, CHLOROPLASTIC	coord: 1..510

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022430.1	Lsi03G022430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
molecular_function	GO:0008320	protein transmembrane transporter activity