
Lsi03G022060 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCCATTTGGTATGCTTTGGTGATGGCAAACCGAAATTTAGTGTGGAACGTTGCGAAGAAATGCTTCACATTTGGAATCATAGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTAATTTTCTATACGCGGCATGTTTGTTGTAGCGAGATGATACCATCTGATGCTTGGATTTGGTTTCAGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGGTTAGTTTCCCTTCATCGCTGCTAATATAGTTATCTGTGTTGTCTTGTTCTGGACGTTTATTTTGTGTATTGTGGTAATACCTTGAATTAATTTCTCTTTTATGGGATGATCCAGTGCATTGTATATGGATAGTCTTGCTGAATTGCTCAAGGTTCGAATCTTAAAAAGAGCAGGCTAGATAATTTAATATTTGGATTGGCTCTTCTTAGTGGAGAAATCACGTTTGGCCTCCAATTTATTAACTTCCCGAAGAACTGAAAATTAAGATAAGCTTAACTCCATGACCTGCAATTTGCATAGAATGAAATGGTTACTCTTCGGCAACCGGATTTTTGTTTTAGGGATTGGATTTTGTGGTAGGATAGTATTTGGATCAAGAGGAACAAGACTTTTTAGAGATTGGGAGAGACATTGGGAAAAGGTATGGTTGATTTATTTGGACCGATTTTCAGGGATTTTTTAAAAAAATTATCCGATTGGTGTTATTATTTTGAACTGAAGATCTTTTTTTGTATAGCCATAGCTAGTTGGTTAGCTTCTCTTAGTGGGCGGTCCTTTTCCATGCACTTCGGTATTCTTTTATTTTGTCTCAATGAAAACTCGGTTTCTCATAAAAATATTTTTATGAAAGAAATGCATAAGAAGTATATTTACTTAGTCACATTAAGTCATCCGAATTAATGGGTAGCACAGTGATCCATCTTTCTCTTGAAGTATTTTAGTACTGATGATGTATTTGAAGTGACTGAAAACATGTTAAGAGAGTATCAGATAGATAGAAAGCTCATTCCTATCATTTCATGCAGTGTTAAAAGATTAGAAAAGTAAGGATTAAATGTAAAAAATAATTCAGGACCTACTGAGCAGAAGATGTGTGTTTATCCCTTTCCTCTTGGATAAAGCTTTGCTTGAGTGTAGAGATGAAGACCTAGCAAGATTCTTGAGGTTAATAAAGGCTGGAGCCTAGTTTGAACTTTGGTGGATGTTCCATCTCATGGAGGGTGGTTTAAGATTAGGAGTCTTCCTCTTATGTTTCCTTGGTTTCTTTTTGTACTTTGAATATCATCCTTGAAAAGCTTAGTCTCTCAAAATTATTTTATCGGTCTATCTCAAACCATACGTAAATTGCTTATACTTTCCTGAACTTGAAGCAAGGTTGAGATAAAAAATATTTTCATTTCATGTAGGTCATATGTTTAACTGGAGAAAGGCAGAACCTTGTCACTTTTGCATCCTCTTTTCTTATATGAAATGTGCGAAATGTTTTTGATCCACACTTAGTGAACATGCTGTGATCACACTTCCCAATTTGTCACAACTTTACTCTCCGCGACTTGCACAATTTATATAAAATTTCCCTCCCGAAATTGTTGACCTGTTGCAGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGGTAAGATACCGTCTGTACTATAATAAACATCTATTTCTTTTGGGGTATGCTATTAGTTTTGAGATGCAACCAGAGTCTCTATGGATGAGCAGCCTCAATCGGATCTCTAAATATTCTTGCAACTGTTTCTGGGACTTGAAAAACACAGTTGAAAATACCATCATTTTTTTTTGAGTTTAAAACTAAGTTATCGTAGAGGGCTCCACTTGTAAGTCTTTAGGATTTTATTGGATCCCTTTCCTGTTTTGGAGATGGTCTTTGATGTTTTATAGAAAATTAAGATACCAAAGAAAGTTAAGTTCTTTTCTTAGCAAGTTTTACTTAGTTGTGTGAACACGATGGATAGGCTTTTGAGAAAGATGCCTTCATTAATGGGTCCTTTTTGTTGTATCCTTTGTCGGTAGGCAGATGGAAACCTAGATCACCTTCTTTGGGGGTGTCAGTTTGTGAGTTTTGTGTGGAATTACTTCTTTTAGAAGTTTCATTTTGTGTTAGCTCACCAAAGGGATGGTTGTTTGATGATCGGGGAGTTCCTCCTTCATCTGCTTTTCAAAGAGAAAGGCCATTTTCTGTGGTTTGTGGGGGTGTGTGCTTTGTTGTGGGATCTTTGGGGAGAAAGAAATAATAGTGTTTAAAGGTGTGGATAGGGATCCTACTAAGGTTTGGTCCTTGGTGATGTTCCATATTTCTCTTTGGGCTTCGGTTTCAATTTTTTTTTTAATTATTCTCTAGGTACATCTTTTTGGGACATGGTTTTTTTGTATGCCCTTGTTTTCTTTCATTTTTTATCAATGAAAGAATTAGTTTTTTTTTTTAAATTAGTTTCTTTAAAACTAAGTTTTCATATGAAGTAGCATTTTAAGAAAATATATTTGTTAATTTACTTGTGCCATAGACATTTCTTGAAATATTTTACTGTAAGTATCTGATATATGTGAGTGCAATTTCTGTTTTATTTTTTTCACTCGAAAGACATGCCTAGTCCAGGCTGACTAAAGTAATTCTTTTGGTGGCAGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAATTCTACTTAAAACTAAACTTAGAAAGATAACCAATTTTCCATGATCGACCCGACCTGGGCCTTTTGCTTAGGTACAAGATTTTGAAACTTGAGGCCTTTCTTGTACTGATTTTTATCTATCACCTTCTTCAATGTTATTTTATAACCTATTACCATACATTATTTACCATTCTTGGGGTATTTCAATGTATAATACCCATATTCCAGGATTGATTCAGTCCACTTTGGAAGATTCCTATAGTTTCTTTTTAGCAATTCTTTATGGTTAAAATCTTCTTTGGTAATTGGTAATTATAGACATATATAATAATTTTGTGTTTTGCTACGTTCTTCCTGTAGAAACTCCTTTACCCTCATTGAACAATCTCATTTGAAGAGAGAAGCTGTAAATTTGAATAGAGGAGACTATATATGTATGAATGGCCATCAACTATGTAGCTCGATGTGCTGCTGGGTTTGCTAT ATGCATCCATTTGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGTGCATTGTATATGGATAGTCTTGCTGAATTGCTCAAGGACCTACTGAGCAGAAGATGTGTGTTTATCCCTTTCCTCTTGGATAAAGCTTTGCTTGAGTGTAGAGATGAAGACCTAGCAAGATTCTTGAGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAATTCTACTTAAAACTAAACTTAGAAAGATAACCAATTTTCCATGATCGACCCGACCTGGGCCTTTTGCTTAGGTACAAGATTTTGAAACTTGAGGCCTTTCTTGTACTGATTTTTATCTATCACCTTCTTCAATGTTATTTTATAACCTATTACCATACATTATTTACCATTCTTGGGGTATTTCAATGTATAATACCCATATTCCAGGATTGATTCAGTCCACTTTGGAAGATTCCTATAGTTTCTTTTTAGCAATTCTTTATGGTTAAAATCTTCTTTGGTAATTGGTAATTATAGACATATATAATAATTTTGTGTTTTGCTACGTTCTTCCTGTAGAAACTCCTTTACCCTCATTGAACAATCTCATTTGAAGAGAGAAGCTGTAAATTTGAATAGAGGAGACTATATATGTATGAATGGCCATCAACTATGTAGCTCGATGTGCTGCTGGGTTTGCTAT ATGCATCCATTTGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGTGCATTGTATATGGATAGTCTTGCTGAATTGCTCAAGGACCTACTGAGCAGAAGATGTGTGTTTATCCCTTTCCTCTTGGATAAAGCTTTGCTTGAGTGTAGAGATGAAGACCTAGCAAGATTCTTGAGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAA MHPFGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRALYMDSLAELLKDLLSRRCVFIPFLLDKALLECRDEDLARFLSSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY Homology
BLAST of Lsi03G022060 vs. ExPASy Swiss-Prot
Match: Q6AZD4 (Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22 Identity = 62/194 (31.96%), Postives = 90/194 (46.39%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy Swiss-Prot
Match: Q2KI92 (Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21 Identity = 64/195 (32.82%), Postives = 89/195 (45.64%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy Swiss-Prot
Match: Q96T52 (Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2L PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21 Identity = 63/195 (32.31%), Postives = 89/195 (45.64%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy Swiss-Prot
Match: Q8BPT6 (Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp2l PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.4e-21 Identity = 62/192 (32.29%), Postives = 87/192 (45.31%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy Swiss-Prot
Match: Q5PQ63 (Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=immp2l PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 9.3e-19 Identity = 59/182 (32.42%), Postives = 79/182 (43.41%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy TrEMBL
Match: A0A6J1CW41 (Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 GN=LOC111014939 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 8.0e-74 Identity = 142/192 (73.96%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy TrEMBL
Match: A0A6J1I8V8 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111470229 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.6e-72 Identity = 138/193 (71.50%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy TrEMBL
Match: A0A6J1GA60 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452339 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 9.8e-72 Identity = 136/193 (70.47%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy TrEMBL
Match: A0A0A0LFB4 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G731770 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71 Identity = 138/188 (73.40%), Postives = 140/188 (74.47%), Query Frame = 0
BLAST of Lsi03G022060 vs. ExPASy TrEMBL
Match: A0A1S3B5N7 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486302 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71 Identity = 138/188 (73.40%), Postives = 140/188 (74.47%), Query Frame = 0
BLAST of Lsi03G022060 vs. NCBI nr
Match: XP_038887833.1 (LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 2-like [Benincasa hispida]) HSP 1 Score: 287.3 bits (734), Expect = 9.7e-74 Identity = 142/188 (75.53%), Postives = 143/188 (76.06%), Query Frame = 0
BLAST of Lsi03G022060 vs. NCBI nr
Match: XP_022145503.1 (mitochondrial inner membrane protease subunit 2 [Momordica charantia]) HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73 Identity = 142/192 (73.96%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of Lsi03G022060 vs. NCBI nr
Match: XP_022971541.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita maxima] >XP_022971544.1 mitochondrial inner membrane protease subunit 2 [Cucurbita maxima]) HSP 1 Score: 281.6 bits (719), Expect = 5.3e-72 Identity = 138/193 (71.50%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of Lsi03G022060 vs. NCBI nr
Match: KAG7027898.1 (Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.8 bits (717), Expect = 9.1e-72 Identity = 137/193 (70.98%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of Lsi03G022060 vs. NCBI nr
Match: XP_023538829.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >XP_023538830.1 mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >KAG6596348.1 Mitochondrial inner membrane protease subunit 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 280.8 bits (717), Expect = 9.1e-72 Identity = 137/193 (70.98%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of Lsi03G022060 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42 Identity = 82/181 (45.30%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of Lsi03G022060 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 78.6 bits (192), Expect = 6.4e-15 Identity = 57/189 (30.16%), Postives = 75/189 (39.68%), Query Frame = 0
BLAST of Lsi03G022060 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 72.0 bits (175), Expect = 6.0e-13 Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of Lsi03G022060 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12 Identity = 50/170 (29.41%), Postives = 73/170 (42.94%), Query Frame = 0
BLAST of Lsi03G022060 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.6e-10 Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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