Lsi03G021730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G021730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Reticulon-like protein
Location	chr03: 32803494 .. 32806176 (-)
RNA-Seq Expression	Lsi03G021730
Synteny	Lsi03G021730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTAATTCTTATGGGGTCCCCAAATAATATAAAAAGATTAATCTTATAATGTTCATGTGCAATAATTCATTTGATCAGAGGGTAATACAAAGAAGAGAGTATCCATCCACTGCCTCTCTCTTTCTAACCAGTAAAAAGAAAAAAGAAAGACAGAAAATCAATGTCAATAGTCAATACCAATTCCAATGGGGGAAATGAAGGAGAAGAAGAATAAAAAGCCACGAGGGGCATGACGCTTTTGACCTGTCAGCTGGCCCAATCCCCATTTTATTTCTTACAATTCCAACTAGTCTGCCCTCAAGACTCTCAACAGAGAGTGGACAACAAAAAAAGCTAAACACAAACTCCTGTTTTTCCTTTTCTGCTGGCTGCCTGCTTCAGAGTTCTCTGTTTCTGTTTCTTTAGGATATTTTGAAAGCTCAACTGGAATCAAGATCCTCTCTTTTCACTTCTTTTGATGGGTTCATCGGATCGTTTATTTTGTAGGCAGCGGACTCTTCACGAAATTGTTGGCGGCGGTATTGGTATGTCAAGATCTTCTGATTTCTGGGTTTTTTTCCATTGTTTTTCTTGATGGATCCTCTTTAAATTTCTATTGGATTGCTCTGTTTCGGTTCTCTATTGAGTTTGCTGTTGAATTTCGAAGCAGTGATTGTTTGTTTGGGAAAATTTTAATCCATGAACTATTTTCTTCTTTTCTGCATCGCTAATGCAAATATATTCTTGCTGTGTATTCTGCTTTTCACTGCAGCTGCTAGAGTTCTAGGATCCATAAATTTCTCTTGCTATAAAATAATTAAGGATTGGGTTTAATTCTTAGTTTTTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAGCGCTGGTGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAGATTGCCTCTTGACTTGCCTGTTATAAGCCATGTCTTCAATTTGAATATGTTGAAGAATGCTAAACTGATATATAAGTTTGAGAATGCTAAACTGATATATAAGTTTGAGAATGCACGATCTTTAAAAGATAAGAGGCATTTCCCTATCGAATTTGACAATAGTCTTGAATGATGATTAAGTCCTGATTCAAATTCTCTAGTTTTTCAACTACGTGATCTATTCATTTGTCCTTGCTTTCTTTTACATTTGATAAACATCTTGGGATTTTTACTTCCATGAGTTCCATTAGTATTTCATGTCCATGTGTGCTTTTAAGTTCCAATCACTTAGTAGTGTTTGTTGTTTTAAATGTATGAGATATATAAATGCATTTGGGAAAGATGATGGACATGAGTTCCATCAGTATTGTTAGATCTTCACATGTTCTTCTAAGCCTTAATAAGCTAGAGATGAAACGATTTGGTAGTTTTTGAGCATTCTAAAATTTATCAATGTAGAGTTTGGTTTTTGTTCAACTGCTGTCTCCTGAGTTGTGAACTTAGCTTCCTGGCAAAGCATTGATGCATTTCAGAAGTGAAAAATTGTCATTCTGAAATTTCTCTATGTATTTCCTAGCTTCCTTATTTCCAGTCAAATCAAGTCTAGCTTAACTTCTAAGTACTTGGATTAAGGTTACTTGTGAATTTGCTACCTTTCTTCTTGAACAGACCAGCGCCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTTCTGTCTGTTTCACAAGATATTGCAATGGGAAAAAACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTATGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACTTTGGGTTACACCAGTAAGTTTCAATCTTCAGTTTCCATAATTCTTTGTGTAATGCTCAATCCTTGGAGATAAAAAAAACAAGCGATGATTGATTGATTTCATGGACATTTTTTTTCTCTCAATGACAGGCCTTTTACTCGTGCTTACGATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCTGCAATCTCTCTTATTCATGGCTTCCTCTCTCTCTCTCTTGCCTTTTCTTCTTATTTCATTTTGGATGTGTTTATGGCGTTCTTTCAACACCTCGTCAGTGACAGAAGCGTGAGAGAAATGATTGTATTTTGTTCATAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAAATGTATTTAGAAACGGCATATTACGAATTTTGAATTTTCATTTTTCTTTTTCCCTCATTTGGGTGATTGGGGGTTTACAGGCAAGTTGATAATATATTTTATATATGCAGCCTTAACAGCAGCAGCTATAATTGATGCTTCCTTACCATCAAATGTTCTAGTTGTTTCATTGTGATTGTGAATGATGGTAAATACAATTGTATTTCCAAATAATGATCGCAACAATTTCGTATAAATCTTATTCAACAAGCAATGTCAGAATTGAT

mRNA sequence

ATGAAGGATATTTTGAAAGCTCAACTGGAATCAAGATCCTCTCTTTTCACTTCTTTTGATGGGTTCATCGGATCGCAGCGGACTCTTCACGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAGCGCTGGTGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTTCTGTCTGTTTCACAAGATATTGCAATGGGAAAAAACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTATGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACTTTGGGTTACACCAGCCTTTTACTCGTGCTTACGATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCTGCAATCTCTCTTATTCATGGCTTCCTCTCTCTCTCTCTTGCCTTTTCTTCTTATTTCATTTTGGATGTGTTTATGGCGTTCTTTCAACACCTCGTCAGTGACAGAAGCGTGAGAGAAATGATTGTATTTTGTTCATAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAAATGTATTTAGAAACGGCATATTACGAATTTTGAATTTTCATTTTTCTTTTTCCCTCATTTGGGTGATTGGGGGTTTACAGGCAAGTTGATAATATATTTTATATATGCAGCCTTAACAGCAGCAGCTATAATTGATGCTTCCTTACCATCAAATGTTCTAGTTGTTTCATTGTGATTGTGAATGATGGTAAATACAATTGTATTTCCAAATAATGATCGCAACAATTTCGTATAAATCTTATTCAACAAGCAATGTCAGAATTGAT

Coding sequence (CDS)

ATGAAGGATATTTTGAAAGCTCAACTGGAATCAAGATCCTCTCTTTTCACTTCTTTTGATGGGTTCATCGGATCGCAGCGGACTCTTCACGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAGCGCTGGTGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTTCTGTCTGTTTCACAAGATATTGCAATGGGAAAAAACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTATGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACTTTGGGTTACACCAGCCTTTTACTCGTGCTTACGATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Protein sequence

MKDILKAQLESRSSLFTSFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRKLYQFYVKLDEKRVLTYQQWILEKEKLS

Homology

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BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.8e-49
Identity = 99/190 (52.11%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 17  TSFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLIS 76
           +S D      RT+HEI+GGGIVADV+LWR+KN++VGI+ + + +W+VFE   YT+ +LIS
Sbjct: 3   SSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLIS 62

Query: 77  SVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAM 136
           SVLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R  VN  L VS DIAM
Sbjct: 63  SVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAM 122

Query: 137 GKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYR 196
            ++  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+   +  +  
Sbjct: 123 ARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICN 182

Query: 197 KLYQFYVKLD 207
           K  + Y++L+
Sbjct: 183 KTRELYLRLE 192

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BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-37
Identity = 91/225 (40.44%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 9   LESRSSLFTSFDG-----------FIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIA 68
           ++S S +   FDG            +G Q T+H+ +GGG  AD++LWRR++L++G+++I+
Sbjct: 1   MDSLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIIS 60

Query: 69  LVTWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAA 128
            V WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA
Sbjct: 61  TVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAA 120

Query: 129 SFIRSRVNTFLSVSQDIAMGKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIP 188
           +  R ++N  L ++ D+ +G + RLFFKV  CLWL+S I     L TL Y   +L +TIP
Sbjct: 121 ASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIP 180

Query: 189 ALYEKYEDYVDRHVILMYRKLYQFYVKLDEKRVLTYQQWILEKEK 223
           ALY KY+  VD+    ++R+L   Y K+ ++ V++   W L K+K
Sbjct: 181 ALYSKYQSKVDKCCGTIHRRLSHHY-KIVDENVISRLSWSLSKDK 224

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BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 76/167 (45.51%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 25  SQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVT 84
           S+ ++H+ +G G VAD++LWR +   V +L+ +   W +FER GY LLS +S+VLLLLV 
Sbjct: 9   SRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVA 68

Query: 85  IIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFF 144
           I FLWAKSA++LNRP PP+P + + E+  N+AA  +R  +N  LS++ DI + +NP    
Sbjct: 69  IFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLL 128

Query: 145 KVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHV 192
           +V+  LW IS +  L + LTL Y  +LL L+ P +YEKY+D++D  V
Sbjct: 129 QVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKV 175

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BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot
Match: Q6NPD8 (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 73/185 (39.46%), Postives = 115/185 (62.16%), Query Frame = 0


Query: 26  QRTLHEIVGGGIVADVILWRRKNLTVGILLIALVT--WLVFERCGYTLLSLISSVLLLLV 85
           + ++H+ +  G VAD+I+W  KN   G LL+   T  W +FE+CGY+    + +  LL V
Sbjct: 2   EESVHQSIRFGSVADLIMW--KNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSV 61

Query: 86  TIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLF 145
            I+FLWAKSA + NRP P LP L ++E+ V   A  IR  +NT L+V+++I +G+N +  
Sbjct: 62  VILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQL 121

Query: 146 FKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRKLYQFYV 205
           F+V+  LW +S +    + LT+ Y  ++L L IP LYE+Y+D +D  + L +R +   Y 
Sbjct: 122 FRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYR 181

Query: 206 KLDEK 209
           K+DE+
Sbjct: 182 KIDER 184

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BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-30
Identity = 73/199 (36.68%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 10  ESRSSLFTSFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGY 69
           ++ +SL T      G ++ LH++ GGG  AD+ LWR K ++ G+L  A V+W++FE   Y
Sbjct: 36  KNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEY 95

Query: 70  TLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLS 129
            LL+L   + +L + ++FLW+ +++ +++    +PE+H+ ED+V + AS +R  +N   +
Sbjct: 96  NLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFT 155

Query: 130 VSQDIAMGKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDR 189
           V +DIA G++ + F  V A LW++S +    + LTL Y + +L+ TIP LYEKYED VD 
Sbjct: 156 VLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDD 215

Query: 190 HVILMYRKLYQFYVKLDEK 209
                 R++ + YV+ D K
Sbjct: 216 FGEKAMREIKKQYVEFDVK 234

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BLAST of Lsi03G021730 vs. ExPASy TrEMBL
Match: A0A6J1CWE2 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111015006 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 185/199 (92.96%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 26  QRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVTI 85
           QRTLHEI+GGG+VADVILWRRKNLTVGILL+ L TWLVFERCGYTLLSLISSVLLLLVTI
Sbjct: 11  QRTLHEIIGGGLVADVILWRRKNLTVGILLLMLATWLVFERCGYTLLSLISSVLLLLVTI 70

Query: 86  IFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFFK 145
           +FLWAKSASILNRPAPPLPELHLSEDMVNEAA+FIRSRVNT LSVSQDIAMGK+PRLFFK
Sbjct: 71  LFLWAKSASILNRPAPPLPELHLSEDMVNEAATFIRSRVNTLLSVSQDIAMGKDPRLFFK 130

Query: 146 VAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRKLYQFYVKL 205
           VAACLWLIS ISGLTDLLTLGYTSL LVLTIPALYEKYEDYVDRHVIL+YR+L+QFYVKL
Sbjct: 131 VAACLWLISFISGLTDLLTLGYTSLFLVLTIPALYEKYEDYVDRHVILIYRRLHQFYVKL 190

Query: 206 DEKRVLTYQQWILEKEKLS 225
           DEKRVLTYQQWILEKEKLS
Sbjct: 191 DEKRVLTYQQWILEKEKLS 209

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BLAST of Lsi03G021730 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 188/207 (90.82%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT+GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRSRVN FLSV+QDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+PRLFFKVAACLWLISVISGLTD++TL YTSLLLVLTIPALYEKYEDYVDRH ILMY+K
Sbjct: 123 KDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           LYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRS VNT LSVSQDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+P+LFFKVAACLWLISVISGLTD++TLGYTSLLLVLTIPALYEKYEDYVD+H ILMYRK
Sbjct: 123 KDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           LYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRS VNT LSVSQDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+P+LFFKVAACLWLISVISGLTD++TLGYTSLLLVLTIPALYEKYEDYVD+H ILMYRK
Sbjct: 123 KDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           LYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93
Identity = 188/208 (90.38%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILN-RPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAM 137
           VLLLLVTIIFLWAKSASILN RPAPPLPEL+LSEDMVNEAASFIRS VNT LSVSQDIAM
Sbjct: 63  VLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAM 122

Query: 138 GKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYR 197
           GK+P+LFFKVAACLWLISVISGLTD++TLGYTSLLLVLTIPALYEKYEDYVD+H ILMYR
Sbjct: 123 GKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYR 182

Query: 198 KLYQFYVKLDEKRVLTYQQWILEKEKLS 225
           KLYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 KLYQFYVKLDEMRVLTYQQWILEKEKLS 210

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BLAST of Lsi03G021730 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-97
Identity = 194/207 (93.72%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLTVGILLI L TWLVFERCGYTLLSL+SS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLITLATWLVFERCGYTLLSLVSS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNT LSVSQDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTLLSVSQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+PRLFFKVAACLWLISVISGLTDL+TLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK
Sbjct: 123 KDPRLFFKVAACLWLISVISGLTDLITLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           L+QFYVKLDEKRVLTYQQWILEKEKLS
Sbjct: 183 LHQFYVKLDEKRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 188/207 (90.82%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT+GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRSRVN FLSV+QDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+PRLFFKVAACLWLISVISGLTD++TL YTSLLLVLTIPALYEKYEDYVDRH ILMY+K
Sbjct: 123 KDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           LYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. NCBI nr
Match: XP_022145597.1 (reticulon-like protein B12 [Momordica charantia] >XP_022145598.1 reticulon-like protein B12 [Momordica charantia])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 185/199 (92.96%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 26  QRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVTI 85
           QRTLHEI+GGG+VADVILWRRKNLTVGILL+ L TWLVFERCGYTLLSLISSVLLLLVTI
Sbjct: 11  QRTLHEIIGGGLVADVILWRRKNLTVGILLLMLATWLVFERCGYTLLSLISSVLLLLVTI 70

Query: 86  IFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFFK 145
           +FLWAKSASILNRPAPPLPELHLSEDMVNEAA+FIRSRVNT LSVSQDIAMGK+PRLFFK
Sbjct: 71  LFLWAKSASILNRPAPPLPELHLSEDMVNEAATFIRSRVNTLLSVSQDIAMGKDPRLFFK 130

Query: 146 VAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRKLYQFYVKL 205
           VAACLWLIS ISGLTDLLTLGYTSL LVLTIPALYEKYEDYVDRHVIL+YR+L+QFYVKL
Sbjct: 131 VAACLWLISFISGLTDLLTLGYTSLFLVLTIPALYEKYEDYVDRHVILIYRRLHQFYVKL 190

Query: 206 DEKRVLTYQQWILEKEKLS 225
           DEKRVLTYQQWILEKEKLS
Sbjct: 191 DEKRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 4.3e-94
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMG 137
           VLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRS VNT LSVSQDIAMG
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMG 122

Query: 138 KNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRK 197
           K+P+LFFKVAACLWLISVISGLTD++TLGYTSLLLVLTIPALYEKYEDYVD+H ILMYRK
Sbjct: 123 KDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRK 182

Query: 198 LYQFYVKLDEKRVLTYQQWILEKEKLS 225
           LYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of Lsi03G021730 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 350.5 bits (898), Expect = 1.1e-92
Identity = 188/208 (90.38%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 18  SFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISS 77
           S D     QRTLHEIVGGGIVADVILWRRKNLT GILLI L TWLVFERCGYTLLSLISS
Sbjct: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISS 62

Query: 78  VLLLLVTIIFLWAKSASILN-RPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAM 137
           VLLLLVTIIFLWAKSASILN RPAPPLPEL+LSEDMVNEAASFIRS VNT LSVSQDIAM
Sbjct: 63  VLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAM 122

Query: 138 GKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYR 197
           GK+P+LFFKVAACLWLISVISGLTD++TLGYTSLLLVLTIPALYEKYEDYVD+H ILMYR
Sbjct: 123 GKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYR 182

Query: 198 KLYQFYVKLDEKRVLTYQQWILEKEKLS 225
           KLYQFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 183 KLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of Lsi03G021730 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein )

HSP 1 Score: 194.9 bits (494), Expect = 6.9e-50
Identity = 99/190 (52.11%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 17  TSFDGFIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLIS 76
           +S D      RT+HEI+GGGIVADV+LWR+KN++VGI+ + + +W+VFE   YT+ +LIS
Sbjct: 3   SSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLIS 62

Query: 77  SVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAM 136
           SVLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R  VN  L VS DIAM
Sbjct: 63  SVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAM 122

Query: 137 GKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYR 196
            ++  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+   +  +  
Sbjct: 123 ARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICN 182

Query: 197 KLYQFYVKLD 207
           K  + Y++L+
Sbjct: 183 KTRELYLRLE 192

[Close]

BLAST of Lsi03G021730 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 91/225 (40.44%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 9   LESRSSLFTSFDG-----------FIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIA 68
           ++S S +   FDG            +G Q T+H+ +GGG  AD++LWRR++L++G+++I+
Sbjct: 1   MDSLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIIS 60

Query: 69  LVTWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAA 128
            V WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA
Sbjct: 61  TVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAA 120

Query: 129 SFIRSRVNTFLSVSQDIAMGKNPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIP 188
           +  R ++N  L ++ D+ +G + RLFFKV  CLWL+S I     L TL Y   +L +TIP
Sbjct: 121 ASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIP 180

Query: 189 ALYEKYEDYVDRHVILMYRKLYQFYVKLDEKRVLTYQQWILEKEK 223
           ALY KY+  VD+    ++R+L   Y K+ ++ V++   W L K+K
Sbjct: 181 ALYSKYQSKVDKCCGTIHRRLSHHY-KIVDENVISRLSWSLSKDK 224

[Close]

BLAST of Lsi03G021730 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-37
Identity = 91/226 (40.27%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 9   LESRSSLFTSFDG-----------FIGSQRTLHEIVGGGIVADVILWRRKNLTVGILLIA 68
           ++S S +   FDG            +G Q T+H+ +GGG  AD++LWRR++L++G+++I+
Sbjct: 1   MDSLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIIS 60

Query: 69  LVTWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAA 128
            V WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA
Sbjct: 61  TVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAA 120

Query: 129 SFIRSRVNTFLSVSQDIAMGKNPRLFFK-VAACLWLISVISGLTDLLTLGYTSLLLVLTI 188
           +  R ++N  L ++ D+ +G + RLFFK V  CLWL+S I     L TL Y   +L +TI
Sbjct: 121 ASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTI 180

Query: 189 PALYEKYEDYVDRHVILMYRKLYQFYVKLDEKRVLTYQQWILEKEK 223
           PALY KY+  VD+    ++R+L   Y K+ ++ V++   W L K+K
Sbjct: 181 PALYSKYQSKVDKCCGTIHRRLSHHY-KIVDENVISRLSWSLSKDK 225

[Close]

BLAST of Lsi03G021730 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36
Identity = 76/167 (45.51%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 25  SQRTLHEIVGGGIVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVT 84
           S+ ++H+ +G G VAD++LWR +   V +L+ +   W +FER GY LLS +S+VLLLLV 
Sbjct: 9   SRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVA 68

Query: 85  IIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFF 144
           I FLWAKSA++LNRP PP+P + + E+  N+AA  +R  +N  LS++ DI + +NP    
Sbjct: 69  IFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLL 128

Query: 145 KVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHV 192
           +V+  LW IS +  L + LTL Y  +LL L+ P +YEKY+D++D  V
Sbjct: 129 QVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKV 175

[Close]

BLAST of Lsi03G021730 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 92/248 (37.10%), Postives = 141/248 (56.85%), Query Frame = 0


Query: 9   LESRSSLFTSFDG-----------FIGSQRTLHEIVGGG--------------------- 68
           ++S S +   FDG            +G Q T+H+ +GGG                     
Sbjct: 1   MDSLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQ 60

Query: 69  -IVADVILWRRKNLTVGILLIALVTWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASI 128
            I AD++LWRR++L++G+++I+ V WL+FE  G   LS+ S VLL+++ I F+ A+ ++ 
Sbjct: 61  FIAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAF 120

Query: 129 LNRPAPPLPELHLSEDMVNEAASFIRSRVNTFLSVSQDIAMGKNPRLFFK-VAACLWLIS 188
            NR    LPEL LSE+MVN AA+  R ++N  L ++ D+ +G + RLFFK V  CLWL+S
Sbjct: 121 RNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLS 180

Query: 189 VISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVILMYRKLYQFYVKLDEKRVLTYQ 223
            I     L TL Y   +L +TIPALY KY+  VD+    ++R+L   Y K+ ++ V++  
Sbjct: 181 AIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHY-KIVDENVISRL 240

The following BLAST results are available for this feature:

BLAST of Lsi03G021730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M392	9.8e-49	52.11	Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1	[more]
Q8GYH6	1.7e-37	40.44	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9LT71	3.6e-35	45.51	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q6NPD8	2.0e-30	39.46	Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1	[more]
Q9SH59	3.5e-30	36.68	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of Lsi03G021730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWE2	1.2e-94	92.96	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111015006 PE=4 SV=1	[more]
A0A0A0LFE7	1.2e-94	90.82	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1	[more]
A0A5D3DMY4	2.1e-94	90.82	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3B6E8	2.1e-94	90.82	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]
A0A5A7TLS2	5.1e-93	90.38	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]

BLAST of Lsi03G021730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904646.1	3.2e-97	93.72	reticulon-like protein B12 [Benincasa hispida]	[more]
XP_004137740.1	2.5e-94	90.82	reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Cs...	[more]
XP_022145597.1	2.5e-94	92.96	reticulon-like protein B12 [Momordica charantia] >XP_022145598.1 reticulon-like ...	[more]
XP_008442476.1	4.3e-94	90.82	PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reti...	[more]
KAA0044144.1	1.1e-92	90.38	reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi03G021730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54120.1	6.9e-50	52.11	Reticulon family protein	[more]
AT3G10915.2	1.2e-38	40.44	Reticulon family protein	[more]
AT3G10915.4	3.0e-37	40.27	Reticulon family protein	[more]
AT3G19460.1	2.6e-36	45.51	Reticulon family protein	[more]
AT3G10915.5	3.1e-34	37.10	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 38..191 e-value: 1.8E-49 score: 167.7
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 38..224 score: 30.366785
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 20..222
None	No IPR available	PANTHER	PTHR10994:SF65	RETICULON-LIKE PROTEIN B12	coord: 20..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G021730.1	Lsi03G021730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane