Lsi03G020880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G020880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	BRI1-KD interacting protein
Location	chr03: 32160026 .. 32162678 (+)
RNA-Seq Expression	Lsi03G020880
Synteny	Lsi03G020880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGATTGGGCGTTTCAGCTATATCTTCGCGACCGATTCATTTTCCTTGACCCAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACTATTTTCGACCTCATCCTCCCAAAATTATCCGATCTACCTCCGCCTCCGCCGCCGCTGCGTCTCCGCCGATCTTTTTCATCATGTTACGGATCAGATGATTTCCGGTTTATCCTTTTGACTCAGCGATTTCAGGTTCTCATGTTCTCAACCTTTGTGTTTTAATTGCTTCGCCCATTTTCGATTTCTTTGCAAAGTTTTCTTCAAGCTTTTGGCTAGCAAATCTGAAGTTTTGTTAGACCCTACGAAAATTAGGGTTTCGAAGAGCATTCAATATGCCTTCGGTACCTATTGATCTCTTCCTTGGCCCTCTGCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCTTCCTCGCATCGTCTGAAGCGGCTCGAAAAGGGTGACCGGCGTGGTAATCTTAGTTAACATGGGCTTCTTTTAGTGCATTTTGTGCTCTATTCGTATTCTTCAATCTTCTCTTTCCTCCTCCTTGCTCTTTGGTCCGTTCGAGGTTTGGAATTCCTAGAGAAATTATAGTTGTACGGTAAGGGTTTATTGTTTTGATCTTGATCTTGAGGTTTTTTTTGGCGGTCGAAGCCTCTGAAAGCGAGTCACTGGCAATTGGCTACTCGTTGAGAGGGTTTTTGCATTCCTGATTATTGTGCGAGGTTTGTGCTTATTCTTTTTAAGAATTTTACGGGCATGATATAGCTTCATGTTTCTTTCTGAGCACCTGGATTGTTTTTCTTTCCGGGCATGTTTTACAATCTCTTGAATATATGTGCAGGTTCTAGCAGATTTCTTGTGTCTTACATAAGCCTGAATGGACATTCCTTCGGTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGTGGATGATCTGCAGTCGTCTTTGAAAGAAATTGATGCCGCATTGTTTAATGATGTTGATGGATTTTTTAAGAAGTCTTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACGTAATGTGAATTACAGCGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACTTCCAACGAAGAAATCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCTTCCCTGTTGTAGCATCCCCTCCAAATGATTCTTCAGACAATGATAAGAAACCACAAACAGCGATGGGTGATGTGTCCTGTAATGAGTCTGTGCATCATGCCTTTTCACGATCCATATCTTTACCAGTAAGTTTTCTTCTCGTCAAAATTAAAAAGGGAAAAAAATTGCAGTTGTGTCCTGTGTTTATGAATTTTTGTATTCAGTAAAGTAGTTTTGCTATCTCTATCTCTACCCTTTTCTTTTTTTTTCATAAAAACTATTAATATCATAATTATTCTTTTGTTACAAAGGCAAATATGGTGTGGGCACTGGAACTTCTATGGACAAACTTTACAAGTTTGGCTGACATGATTGATGATCCTAGAGATTATATAGAAAACCCAATTTTTTTAATATAGTGACTTAGCATCTATTTGTTTCCTTAATGAAAATATGTTCTTTCTTAGTATGTCATGTTTTTTTGTTCATGTGGAAGCAGTTCTGCTGTTGCCAGTATGCTTTGCCTTTAAGTTGTGGCATTGTGCAATATGATGTATGTACTTAATTTTTTTCGTGGTTTTCTCATTGTCTTTTCATGAGCAGCATAACTGAAAGATGATTTTCTCTTTTATCTCCAAATGCAAATTTGAGTTTGTTTCTGATAAAACAGCACATTATCAGAAGTTACTTGTGGTTATATTCAATTATAGATAATGAATTAGTGAAAAGTAAATGTTAGTGAAGCCATTGCATATTTGCATTTTGTCTTGCCCCTTCTGTTTGCTGACTTAACTTCTGACATCCAGGCTCCTGCGAAGCTCGTTTCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCACCTAAGATGACTGTAACATGGGCTCCTGATGTCTACGACCCTCCTCAGACATCGTTGTGCCATTGTGCCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAAAAAGGACAGAAAGGCAGCAACTCTTCACGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGCAAATCTGTTGGTAGTTCTGATCGGTATCAAAGATCATTTAACTCTCACGAAAGTTTGGTTACTACACTCAATGAGTTTGAGAGTTTCGACGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGATCGTTACTTGTCCAAGTTTTCATCTTCTCTCACAGTTTCTGTAAATAAATAAATTGTTGTTTTGGTTTCTTTTGTAATTGTGGATGACAGAGATGCTTGGACCAAAAAATTGTATGACGTTAACTCGTTTGTTGTTTGTTTGTACAAGAGATTTTGAGGATTTATAGACCTTTTTGTTATATGATAAGATGTTTGTTGAAATTCGCTTTTTACTAAGCCGAACTGAAATGGTATGATACTATGTTTATGGATAATGATTGTGACTGCTTCTTGGACGTTTTTAT

mRNA sequence

TGTGATTGGGCGTTTCAGCTATATCTTCGCGACCGATTCATTTTCCTTGACCCAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACTATTTTCGACCTCATCCTCCCAAAATTATCCGATCTACCTCCGCCTCCGCCGCCGCTGCGTCTCCGCCGATCTTTTTCATCATGTTACGGATCAGATGATTTCCGGTTTATCCTTTTGACTCAGCGATTTCAGGTTCTCATGTTCTCAACCTTTGTGTTTTAATTGCTTCGCCCATTTTCGATTTCTTTGCAAAGTTTTCTTCAAGCTTTTGGCTAGCAAATCTGAAGTTTTGTTAGACCCTACGAAAATTAGGGTTTCGAAGAGCATTCAATATGCCTTCGGTACCTATTGATCTCTTCCTTGGCCCTCTGCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCTTCCTCGCATCGTCTGAAGCGGCTCGAAAAGGGTGACCGGCGTGGTAATCTTAGTTAACATGGGCTTCTTTTAGTGCATTTTGTGCTCTATTCGTATTCTTCAATCTTCTCTTTCCTCCTCCTTGCTCTTTGGTCCGTTCGAGGTTTGGAATTCCTAGAGAAATTATAGTTGTACGGTAAGGGTTTATTGTTTTGATCTTGATCTTGAGGTTTTTTTTGGCGGTCGAAGCCTCTGAAAGCGAGTCACTGGCAATTGGCTACTCGTTGAGAGGGTTTTTGCATTCCTGATTATTGTGCGAGGTTCTAGCAGATTTCTTGTGTCTTACATAAGCCTGAATGGACATTCCTTCGGTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGTGGATGATCTGCAGTCGTCTTTGAAAGAAATTGATGCCGCATTGTTTAATGATGTTGATGGATTTTTTAAGAAGTCTTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACGTAATGTGAATTACAGCGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACTTCCAACGAAGAAATCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCTTCCCTGTTGTAGCATCCCCTCCAAATGATTCTTCAGACAATGATAAGAAACCACAAACAGCGATGGGTGATGTGTCCTGTAATGAGTCTGTGCATCATGCCTTTTCACGATCCATATCTTTACCAGCTCCTGCGAAGCTCGTTTCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCACCTAAGATGACTGTAACATGGGCTCCTGATGTCTACGACCCTCCTCAGACATCGTTGTGCCATTGTGCCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAAAAAGGACAGAAAGGCAGCAACTCTTCACGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGCAAATCTGTTGGTAGTTCTGATCGGTATCAAAGATCATTTAACTCTCACGAAAGTTTGGTTACTACACTCAATGAGTTTGAGAGTTTCGACGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGATCGTTACTTGTCCAAGTTTTCATCTTCTCTCACAGTTTCTGTAAATAAATAAATTGTTGTTTTGGTTTCTTTTGTAATTGTGGATGACAGAGATGCTTGGACCAAAAAATTGTATGACGTTAACTCGTTTGTTGTTTGTTTGTACAAGAGATTTTGAGGATTTATAGACCTTTTTGTTATATGATAAGATGTTTGTTGAAATTCGCTTTTTACTAAGCCGAACTGAAATGGTATGATACTATGTTTATGGATAATGATTGTGACTGCTTCTTGGACGTTTTTAT

Coding sequence (CDS)

ATGGACATTCCTTCGGTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGTGGATGATCTGCAGTCGTCTTTGAAAGAAATTGATGCCGCATTGTTTAATGATGTTGATGGATTTTTTAAGAAGTCTTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACGTAATGTGAATTACAGCGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACTTCCAACGAAGAAATCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCTTCCCTGTTGTAGCATCCCCTCCAAATGATTCTTCAGACAATGATAAGAAACCACAAACAGCGATGGGTGATGTGTCCTGTAATGAGTCTGTGCATCATGCCTTTTCACGATCCATATCTTTACCAGCTCCTGCGAAGCTCGTTTCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCACCTAAGATGACTGTAACATGGGCTCCTGATGTCTACGACCCTCCTCAGACATCGTTGTGCCATTGTGCCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAAAAAGGACAGAAAGGCAGCAACTCTTCACGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGCAAATCTGTTGGTAGTTCTGATCGGTATCAAAGATCATTTAACTCTCACGAAAGTTTGGTTACTACACTCAATGAGTTTGAGAGTTTCGACGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA

Protein sequence

MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVNYSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSCNESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKNNKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL

Homology

[Close]

BLAST of Lsi03G020880 vs. ExPASy TrEMBL
Match: A0A1S3B607 (uncharacterized protein LOC103486407 OS=Cucumis melo OX=3656 GN=LOC103486407 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.1e-129
Identity = 250/273 (91.58%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPS+HQKLA+  VDGLVDDLQSSLKEIDAALFND+DGFFKKSLSIEDTQSSE KR+VN
Sbjct: 1   MDIPSIHQKLAV-GVDGLVDDLQSSLKEIDAALFNDLDGFFKKSLSIEDTQSSEFKRDVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
            SDNSNDRNKQKELE+P+  SSKKCLSKSKSFP PVV SPPNDS DNDK+ QTAMGDVSC
Sbjct: 61  CSDNSNDRNKQKELEIPSSNSSKKCLSKSKSFPLPVVTSPPNDSLDNDKERQTAMGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NES+H AFSRSISLP PAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHC KN
Sbjct: 121 NESMHQAFSRSISLPVPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNE 240
           NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS ESLV TLNE
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSQESLVNTLNE 240

Query: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL
Sbjct: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 272

[Close]

BLAST of Lsi03G020880 vs. ExPASy TrEMBL
Match: A0A5D3DN94 (BRI1-KD interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001860 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.0e-123
Identity = 239/258 (92.64%), Postives = 245/258 (94.96%), Query Frame = 0


Query: 16  DGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVNYSDNSNDRNKQKELE 75
           DGLVDDLQSSLKEIDAALFND+DGFFKKSLSIEDTQSSE KR+VN SDNSNDRNKQKELE
Sbjct: 83  DGLVDDLQSSLKEIDAALFNDLDGFFKKSLSIEDTQSSEFKRDVNCSDNSNDRNKQKELE 142

Query: 76  LPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSCNESVHHAFSRSISLP 135
           +P+  SSKKCLSKSKSFP PVV SPPNDS DNDK+ QTAMGDVSCNES+H AFSRSISLP
Sbjct: 143 IPSSNSSKKCLSKSKSFPLPVVTSPPNDSLDNDKERQTAMGDVSCNESMHQAFSRSISLP 202

Query: 136 APAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKNNKKQQKSKNRKNGKK 195
            PAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHC KNNKKQQKSKNRKNGKK
Sbjct: 203 VPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCVKNNKKQQKSKNRKNGKK 262

Query: 196 GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNEFESFDDGSSDSHCGS 255
           GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS ESLV TLNEFESFDDGSSDSHCGS
Sbjct: 263 GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSQESLVNTLNEFESFDDGSSDSHCGS 322

Query: 256 IFLKTSVTKVHYSVTEAL 274
           IFLKTSVTKVHYSVTEAL
Sbjct: 323 IFLKTSVTKVHYSVTEAL 340

[Close]

BLAST of Lsi03G020880 vs. ExPASy TrEMBL
Match: A0A0A0LFL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734920 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-123
Identity = 241/273 (88.28%), Postives = 254/273 (93.04%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPS+HQKLA+  VDGLVDDLQSSLKEIDAALF+D+DGFFKKSLSIEDTQSSE KR+VN
Sbjct: 1   MDIPSIHQKLAV-GVDGLVDDLQSSLKEIDAALFSDLDGFFKKSLSIEDTQSSEFKRDVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
            SDNSN +NKQKELE+P+   SKKCL KSKSFP PVV SPPND+S+NDK+ QTAMGDVSC
Sbjct: 61  CSDNSNVKNKQKELEIPS-NLSKKCLRKSKSFPLPVVTSPPNDTSENDKERQTAMGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NE  H AFSRSISLP P KL+SAMKGSRAQHYGESPKM+VTWAPDVYDPPQTSLCHC KN
Sbjct: 121 NEFNHQAFSRSISLPVPGKLLSAMKGSRAQHYGESPKMSVTWAPDVYDPPQTSLCHCVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNE 240
           NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLV TLNE
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVNTLNE 240

Query: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL
Sbjct: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 271

[Close]

BLAST of Lsi03G020880 vs. ExPASy TrEMBL
Match: A0A6J1J4W0 (uncharacterized protein LOC111481389 OS=Cucurbita maxima OX=3661 GN=LOC111481389 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 231/276 (83.70%), Postives = 247/276 (89.49%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPSVHQKLAL DVDGL DDLQSSLKEID  LF+D+DGFFKKSLS+EDTQSSECK +VN
Sbjct: 1   MDIPSVHQKLALLDVDGL-DDLQSSLKEIDGTLFSDLDGFFKKSLSLEDTQSSECKLSVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
              NSNDRNKQK LELP   S+ KCLSKSKSFP P V SPP +SSDN+KKPQ A GDVSC
Sbjct: 61  CCYNSNDRNKQKGLELPELNSANKCLSKSKSFPIPAVTSPPKESSDNEKKPQVATGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NES+H AF+RSISLPAP +LVSAMKGSR QHYGESPKMTVTWAPDVYDPPQTSLCH  KN
Sbjct: 121 NESMHQAFARSISLPAPVRLVSAMKGSRVQHYGESPKMTVTWAPDVYDPPQTSLCHSVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGS---GGRDKRQARKSVGSSDRYQRSFNSHESLVTT 240
           NKKQQKSKNRKNGKKGQKGSNSSRGS   GGRDKRQARK+V SSDRYQ+SFN HESLV+T
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGGGGRDKRQARKAVASSDRYQKSFNPHESLVST 240

Query: 241 LNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           LNE+E+FDDGSSDSHCGSIFLKTS+TKVHYSVTEAL
Sbjct: 241 LNEYENFDDGSSDSHCGSIFLKTSLTKVHYSVTEAL 275

[Close]

BLAST of Lsi03G020880 vs. ExPASy TrEMBL
Match: A0A6J1F8B3 (uncharacterized protein LOC111441794 OS=Cucurbita moschata OX=3662 GN=LOC111441794 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.0e-115
Identity = 231/276 (83.70%), Postives = 247/276 (89.49%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPSVHQKLAL DVDGL DDLQSSLKEIDAALF+D+DGFFKKSLSIEDTQSSECK +VN
Sbjct: 1   MDIPSVHQKLALLDVDGL-DDLQSSLKEIDAALFSDLDGFFKKSLSIEDTQSSECKLSVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
              +SNDR KQK LELP   S+ KCLSKSKSFP P V SPP +SSDN+KKPQ A GDVSC
Sbjct: 61  CCYDSNDRYKQKGLELPENNSANKCLSKSKSFPIPAVTSPPKESSDNEKKPQVATGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NES+H AF+RSISLPAP +LVSAMKGSR QHYGESPKMTVTWAPDVYDPPQTSLCH  KN
Sbjct: 121 NESMHQAFARSISLPAPVRLVSAMKGSRVQHYGESPKMTVTWAPDVYDPPQTSLCHSVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGS---GGRDKRQARKSVGSSDRYQRSFNSHESLVTT 240
           NKKQQKSKNRKNGKKGQKGSNSSRGS   GGRDKRQARK+  SSDRYQ+SFN HESLV+T
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGGGGRDKRQARKA-ASSDRYQKSFNPHESLVST 240

Query: 241 LNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           LNE+E+FDDGSSDSHCGSIFLKTS+TKVHYSVTEAL
Sbjct: 241 LNEYENFDDGSSDSHCGSIFLKTSLTKVHYSVTEAL 274

[Close]

BLAST of Lsi03G020880 vs. NCBI nr
Match: XP_008442574.1 (PREDICTED: uncharacterized protein LOC103486407 [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-128
Identity = 250/273 (91.58%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPS+HQKLA+  VDGLVDDLQSSLKEIDAALFND+DGFFKKSLSIEDTQSSE KR+VN
Sbjct: 1   MDIPSIHQKLAV-GVDGLVDDLQSSLKEIDAALFNDLDGFFKKSLSIEDTQSSEFKRDVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
            SDNSNDRNKQKELE+P+  SSKKCLSKSKSFP PVV SPPNDS DNDK+ QTAMGDVSC
Sbjct: 61  CSDNSNDRNKQKELEIPSSNSSKKCLSKSKSFPLPVVTSPPNDSLDNDKERQTAMGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NES+H AFSRSISLP PAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHC KN
Sbjct: 121 NESMHQAFSRSISLPVPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNE 240
           NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS ESLV TLNE
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSQESLVNTLNE 240

Query: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL
Sbjct: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 272

[Close]

BLAST of Lsi03G020880 vs. NCBI nr
Match: KAA0044073.1 (BRI1-KD interacting protein [Cucumis melo var. makuwa] >TYK25064.1 BRI1-KD interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 451.8 bits (1161), Expect = 4.1e-123
Identity = 239/258 (92.64%), Postives = 245/258 (94.96%), Query Frame = 0


Query: 16  DGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVNYSDNSNDRNKQKELE 75
           DGLVDDLQSSLKEIDAALFND+DGFFKKSLSIEDTQSSE KR+VN SDNSNDRNKQKELE
Sbjct: 83  DGLVDDLQSSLKEIDAALFNDLDGFFKKSLSIEDTQSSEFKRDVNCSDNSNDRNKQKELE 142

Query: 76  LPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSCNESVHHAFSRSISLP 135
           +P+  SSKKCLSKSKSFP PVV SPPNDS DNDK+ QTAMGDVSCNES+H AFSRSISLP
Sbjct: 143 IPSSNSSKKCLSKSKSFPLPVVTSPPNDSLDNDKERQTAMGDVSCNESMHQAFSRSISLP 202

Query: 136 APAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKNNKKQQKSKNRKNGKK 195
            PAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHC KNNKKQQKSKNRKNGKK
Sbjct: 203 VPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCVKNNKKQQKSKNRKNGKK 262

Query: 196 GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNEFESFDDGSSDSHCGS 255
           GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS ESLV TLNEFESFDDGSSDSHCGS
Sbjct: 263 GQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSQESLVNTLNEFESFDDGSSDSHCGS 322

Query: 256 IFLKTSVTKVHYSVTEAL 274
           IFLKTSVTKVHYSVTEAL
Sbjct: 323 IFLKTSVTKVHYSVTEAL 340

[Close]

BLAST of Lsi03G020880 vs. NCBI nr
Match: XP_004137784.1 (uncharacterized protein LOC101207898 [Cucumis sativus] >KGN58891.1 hypothetical protein Csa_001192 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122
Identity = 241/273 (88.28%), Postives = 254/273 (93.04%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPS+HQKLA+  VDGLVDDLQSSLKEIDAALF+D+DGFFKKSLSIEDTQSSE KR+VN
Sbjct: 1   MDIPSIHQKLAV-GVDGLVDDLQSSLKEIDAALFSDLDGFFKKSLSIEDTQSSEFKRDVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
            SDNSN +NKQKELE+P+   SKKCL KSKSFP PVV SPPND+S+NDK+ QTAMGDVSC
Sbjct: 61  CSDNSNVKNKQKELEIPS-NLSKKCLRKSKSFPLPVVTSPPNDTSENDKERQTAMGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NE  H AFSRSISLP P KL+SAMKGSRAQHYGESPKM+VTWAPDVYDPPQTSLCHC KN
Sbjct: 121 NEFNHQAFSRSISLPVPGKLLSAMKGSRAQHYGESPKMSVTWAPDVYDPPQTSLCHCVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNE 240
           NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLV TLNE
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVNTLNE 240

Query: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL
Sbjct: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 271

[Close]

BLAST of Lsi03G020880 vs. NCBI nr
Match: XP_038903853.1 (uncharacterized protein LOC120090339 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.5e-122
Identity = 238/273 (87.18%), Postives = 251/273 (91.94%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDI S+HQKL LQDVD +VDDLQSSLK+IDAALFND+DGFFKKSLSIEDT SS+CKRNVN
Sbjct: 1   MDIASIHQKL-LQDVDVVVDDLQSSLKDIDAALFNDLDGFFKKSLSIEDTHSSKCKRNVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
             DNSND NKQKELE+P   SSKKCLSKSKSFP PV  SPP D  DNDKKP+T +GDVSC
Sbjct: 61  CRDNSNDENKQKELEIPKNNSSKKCLSKSKSFPLPVTTSPPKDYPDNDKKPKTTVGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NE++H AFSRSISLPAPAKL+SAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHC KN
Sbjct: 121 NETMHQAFSRSISLPAPAKLISAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNSHESLVTTLNE 240
           NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS  S+V TLNE
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKSVGSSDRYQRSFNS-PSVVNTLNE 240

Query: 241 FESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           F+SFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL
Sbjct: 241 FDSFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 271

[Close]

BLAST of Lsi03G020880 vs. NCBI nr
Match: XP_022982544.1 (uncharacterized protein LOC111481389 [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 3.4e-117
Identity = 231/276 (83.70%), Postives = 247/276 (89.49%), Query Frame = 0


Query: 1   MDIPSVHQKLALQDVDGLVDDLQSSLKEIDAALFNDVDGFFKKSLSIEDTQSSECKRNVN 60
           MDIPSVHQKLAL DVDGL DDLQSSLKEID  LF+D+DGFFKKSLS+EDTQSSECK +VN
Sbjct: 1   MDIPSVHQKLALLDVDGL-DDLQSSLKEIDGTLFSDLDGFFKKSLSLEDTQSSECKLSVN 60

Query: 61  YSDNSNDRNKQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSC 120
              NSNDRNKQK LELP   S+ KCLSKSKSFP P V SPP +SSDN+KKPQ A GDVSC
Sbjct: 61  CCYNSNDRNKQKGLELPELNSANKCLSKSKSFPIPAVTSPPKESSDNEKKPQVATGDVSC 120

Query: 121 NESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKN 180
           NES+H AF+RSISLPAP +LVSAMKGSR QHYGESPKMTVTWAPDVYDPPQTSLCH  KN
Sbjct: 121 NESMHQAFARSISLPAPVRLVSAMKGSRVQHYGESPKMTVTWAPDVYDPPQTSLCHSVKN 180

Query: 181 NKKQQKSKNRKNGKKGQKGSNSSRGS---GGRDKRQARKSVGSSDRYQRSFNSHESLVTT 240
           NKKQQKSKNRKNGKKGQKGSNSSRGS   GGRDKRQARK+V SSDRYQ+SFN HESLV+T
Sbjct: 181 NKKQQKSKNRKNGKKGQKGSNSSRGSGGGGGRDKRQARKAVASSDRYQKSFNPHESLVST 240

Query: 241 LNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL 274
           LNE+E+FDDGSSDSHCGSIFLKTS+TKVHYSVTEAL
Sbjct: 241 LNEYENFDDGSSDSHCGSIFLKTSLTKVHYSVTEAL 275

[Close]

BLAST of Lsi03G020880 vs. TAIR 10
Match: AT3G53670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 87  SKSKSFPFPVVASPPNDSSDN---DKKPQTAMGDVSCNESVHHAFSRSISLPAPAKLVSA 146
           SK K+   P+  S P +S D+   DK   TA+ D+         FS S+S+     L+ A
Sbjct: 58  SKDKAISEPIPESLPLNSLDDESEDKNLATALQDM---------FSESMSV---VTLIPA 117

Query: 147 MKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKNNKKQQKSKN----RKNGKKGQKG 206
           +KG R +H     K++V+WA DVYDPP + + H     ++ QKSK+    +KNGKKGQKG
Sbjct: 118 IKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQKSKSKDNLKKNGKKGQKG 177

Query: 207 SNSSRGSGGRDKRQARKSVGSSDRY 225
           S++SR S  + +  +R S  S D++
Sbjct: 178 SSNSRSSKDKKQISSRSSKYSRDKF 190

[Close]

BLAST of Lsi03G020880 vs. TAIR 10
Match: AT3G53670.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). )

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 87  SKSKSFPFPVVASPPNDSSDN---DKKPQTAMGDVSCNESVHHAFSRSISLPAPAKLVSA 146
           SK K+   P+  S P +S D+   DK   TA+ D+         FS S+S+     L+ A
Sbjct: 58  SKDKAISEPIPESLPLNSLDDESEDKNLATALQDM---------FSESMSV---VTLIPA 117

Query: 147 MKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCHCAKNNKKQQKSKN----RKNGKKGQKG 206
           +KG R +H     K++V+WA DVYDPP + + H     ++ QKSK+    +KNGKKGQKG
Sbjct: 118 IKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQKSKSKDNLKKNGKKGQKG 177

Query: 207 SNSSRGSGGRDKRQARKSVGSSDRY 225
           S++SR S  + +  +R S  S D++
Sbjct: 178 SSNSRSSKDKKQISSRSSKYSRDKF 190

[Close]

BLAST of Lsi03G020880 vs. TAIR 10
Match: AT2G37480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 54/167 (32.34%), Postives = 80/167 (47.90%), Query Frame = 0


Query: 70  KQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDK--------KPQTAMGD---- 129
           K  + ++ T  S  +C   S+   F    S  +  SD D+          +TA+ D    
Sbjct: 11  KDADFDIST-SSPTQCSKGSEHTSF--TGSEDSQESDGDETGYIDPTVNDETAVQDFGKS 70

Query: 130 -VSCNESVHHAFSRSISLPAPAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSLCH 189
            +S N S       ++    P  L+ A+KGSR ++     K +V+W  DVYDPP +   H
Sbjct: 71  VLSPNSSDDEDKDENLMTQTPIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIASH 130

Query: 190 CAKNNKKQQ-----KSKNRKNGKKGQKG--SNSSRGSGGRDKRQARK 217
               +KKQQ     K  +RK GKKGQK   ++SSRG   +DK+QA +
Sbjct: 131 TVTRSKKQQQKSKSKDNHRKTGKKGQKSKDNSSSRGGSSKDKKQASR 174

[Close]

BLAST of Lsi03G020880 vs. TAIR 10
Match: AT2G37480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06
Identity = 55/169 (32.54%), Postives = 80/169 (47.34%), Query Frame = 0


Query: 70  KQKELELPTKKSSKKCLSKSKSFPFPVVASPPNDSSDNDKKPQTAMGDVSCN-ESVHHAF 129
           K  + ++ T  S  +C   S+   F    S  +  SD D   +T   D + N E+    F
Sbjct: 11  KDADFDIST-SSPTQCSKGSEHTSF--TGSEDSQESDGD---ETGYIDPTVNDETAVQDF 70

Query: 130 SRSISLP--------------APAKLVSAMKGSRAQHYGESPKMTVTWAPDVYDPPQTSL 189
            +S+  P               P  L+ A+KGSR ++     K +V+W  DVYDPP +  
Sbjct: 71  GKSVLSPNSSDDEDKDENLMTTPIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIA 130

Query: 190 CHCAKNNKKQQ-----KSKNRKNGKKGQKG--SNSSRGSGGRDKRQARK 217
            H    +KKQQ     K  +RK GKKGQK   ++SSRG   +DK+QA +
Sbjct: 131 SHTVTRSKKQQQKSKSKDNHRKTGKKGQKSKDNSSSRGGSSKDKKQASR 173

The following BLAST results are available for this feature:

BLAST of Lsi03G020880 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G020880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B607	7.1e-129	91.58	uncharacterized protein LOC103486407 OS=Cucumis melo OX=3656 GN=LOC103486407 PE=...	[more]
A0A5D3DN94	2.0e-123	92.64	BRI1-KD interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LFL9	9.9e-123	88.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734920 PE=4 SV=1	[more]
A0A6J1J4W0	1.6e-117	83.70	uncharacterized protein LOC111481389 OS=Cucurbita maxima OX=3661 GN=LOC111481389...	[more]
A0A6J1F8B3	2.0e-115	83.70	uncharacterized protein LOC111441794 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of Lsi03G020880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442574.1	1.5e-128	91.58	PREDICTED: uncharacterized protein LOC103486407 [Cucumis melo]	[more]
KAA0044073.1	4.1e-123	92.64	BRI1-KD interacting protein [Cucumis melo var. makuwa] >TYK25064.1 BRI1-KD inter...	[more]
XP_004137784.1	2.0e-122	88.28	uncharacterized protein LOC101207898 [Cucumis sativus] >KGN58891.1 hypothetical ...	[more]
XP_038903853.1	3.5e-122	87.18	uncharacterized protein LOC120090339 [Benincasa hispida]	[more]
XP_022982544.1	3.4e-117	83.70	uncharacterized protein LOC111481389 [Cucurbita maxima]	[more]

BLAST of Lsi03G020880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53670.1	2.7e-11	37.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G53670.2	2.7e-11	37.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G37480.1	1.2e-06	32.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G37480.2	2.6e-06	32.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..228
None	No IPR available	PANTHER	PTHR34952	OS05G0113500 PROTEIN	coord: 1..273
None	No IPR available	PANTHER	PTHR34952:SF2	OS05G0113500 PROTEIN	coord: 1..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G020880.1	Lsi03G020880.1	mRNA