Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGCAATAAATGGATGTAATAAATGAGAAGGTTTAAACATGGAGGTAGATGAATCAGGTCAGAGTTACAAAACAGCTGCCACTTTTGCACAGTATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTCCCAAAAAAATAAAATTGTTAAAGAGTTCATCTTTCCACTTTTTCTGACTATTTGTATTCTAATCCAAGCAATTGTGCTCAGGCCAAGAAAATGGCACCCACTACCAAGGTGGACATCAAATGGAGGTCTCTCTCTCTCTCTTTCACTTTAAAATGTGAAGTGGGTTTGTTCTATCTATCTCTCTTTCTAAATTTTGATGCGGGTTTTGTATGGCAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGGTATTACCAATGCCAAAACTCTCCTCATTTTTACCCTAATTTGAACTTGGTTCATTTTCCCTATTGTGTTCCTTTCAAGCATTTTATCGAACATGTTGCAGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGAACTCAAATGTGTGTGAGAGAGAGATTGGATTTGGAAATGGGCCTGATTGAAAAGCCCATCAGACCCAGCCCACTTAAGACTTACAAAATGGATATTATTTCAAAATACCATTTTCGTCCCTA
mRNA sequence
AGAGCAATAAATGGATGTAATAAATGAGAAGGTTTAAACATGGAGGTAGATGAATCAGGTCAGAGTTACAAAACAGCTGCCACTTTTGCACAGTATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTCCCAAAAAAATAAAATTGTTAAAGAGTTCATCTTTCCACTTTTTCTGACTATTTGTATTCTAATCCAAGCAATTGTGCTCAGGCCAAGAAAATGGCACCCACTACCAAGGTGGACATCAAATGGAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGAACTCAAATGTGTGTGAGAGAGAGATTGGATTTGGAAATGGGCCTGATTGAAAAGCCCATCAGACCCAGCCCACTTAAGACTTACAAAATGGATATTATTTCAAAATACCATTTTCGTCCCTA
Coding sequence (CDS)
ATGGCACCCACTACCAAGGTGGACATCAAATGGAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGA
Protein sequence
MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV
Homology
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match:
A0A1S3B6U8 (uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=4 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
M+P TK+DIKWSGNKM EGGEV TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQ
Sbjct: 67 MSPYTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQ 126
Query: 61 ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RN
Sbjct: 127 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRN 186
Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
SK I EISHSEEENRNA GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+
Sbjct: 187 SKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVD 246
Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
PEKSETG++L P ISERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 247 SPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match:
A0A0A0LDB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 5.8e-84
Identity = 183/230 (79.57%), Postives = 201/230 (87.39%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
MAP TK+DIKWSGNKM EGGEV TMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQ
Sbjct: 1 MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQ 60
Query: 61 ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEAS+SSEI +E+EPKT IEV PL +
Sbjct: 61 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSH 120
Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
SK I EI HSEEENRNA GSTSSN SAS+I SD+P KTKIGNCGKE DSVDDSLAIVAV+
Sbjct: 121 SKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVD 180
Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
P KSET ++L P ISERIIEVLNDLK ARERIQ SMK+C+ +MI+V P+
Sbjct: 181 SPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match:
A0A5A7TKN7 (Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002050 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 178/214 (83.18%), Postives = 192/214 (89.72%), Query Frame = 0
Query: 16 MEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQ 75
+EGGEV TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQITKQIQMK +AEKKLQ
Sbjct: 2 VEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQIQMKARAEKKLQ 61
Query: 76 LLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRN 135
LLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RNSK I EISHSEEENRN
Sbjct: 62 LLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGINEISHSEEENRN 121
Query: 136 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAIS 195
A GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+ PEKSETG++L P IS
Sbjct: 122 ARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEKSETGEQLKPVIS 181
Query: 196 ERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
ERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 182 ERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 214
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match:
A0A6J1L305 (uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 2.3e-80
Identity = 178/229 (77.73%), Postives = 196/229 (85.59%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
MA +TKVDIKWSGN MEG EVL TMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1 MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
Query: 61 TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
T+Q QM+TKAEKKLQLLKKKLESL+LS TM+NSE SISSEI DEDEPKTL L NS
Sbjct: 61 TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
+ IGEISHS+EEN NA G+TSS+SS SEI S+E K KI N G+EF+SVDDSLA VAVN
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
PE++ETG E+ ISER+IEVLNDLK ARERIQRSMKICELNM+KV PV
Sbjct: 181 PEETETG-EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match:
A0A6J1CXG5 (uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015099 PE=4 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71
Identity = 164/229 (71.62%), Postives = 181/229 (79.04%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
MAP K DIKWSGNKMEG EVL TMECLRRRLLAERQAS LAKE+AELM KRS ELEKQI
Sbjct: 1 MAPNAKEDIKWSGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQI 60
Query: 61 TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
T+QI M+TKAEKKL+LL+KKLESLNL ST V SE S+SSEI D ++PKTLI L N+
Sbjct: 61 TEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNA 120
Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
+A GEISHSEE N NA G + +SSASEIC D+ K KI N G EF S DS A+VAVN
Sbjct: 121 QATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNS 180
Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
PE S+TG E PAI+E IIEVLNDLKHARERIQ SM+I ELNMIKV PV
Sbjct: 181 PENSKTG-EWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228
BLAST of Lsi03G020700 vs. NCBI nr
Match:
XP_038906280.1 (uncharacterized protein LOC120092141 [Benincasa hispida])
HSP 1 Score: 354.8 bits (909), Expect = 5.8e-94
Identity = 200/229 (87.34%), Postives = 206/229 (89.96%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
MAP +IKWSGNKMEGGEV TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 15 MAP----NIKWSGNKMEGGEVSKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 74
Query: 61 TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
TKQIQMKTKAEKKLQLLKKKL SLNLS+TMVNSEAS+SSEI DEDEPKTLIEVP L NS
Sbjct: 75 TKQIQMKTKAEKKLQLLKKKLGSLNLSTTMVNSEASVSSEICDEDEPKTLIEVPSLLSNS 134
Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
KAIGEISH EEENRNA GSTSSNSSASEICSDEP KTKIG C KEFDSVDDSLAIVAVN
Sbjct: 135 KAIGEISHLEEENRNARGSTSSNSSASEICSDEPSKTKIGKCEKEFDSVDDSLAIVAVNS 194
Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
P KSETGDEL P ISERIIEVLNDLKHARE I+ SMKICE+NMI+V PV
Sbjct: 195 PGKSETGDELKPLISERIIEVLNDLKHARETIRSSMKICEVNMIEVSPV 239
BLAST of Lsi03G020700 vs. NCBI nr
Match:
XP_008442604.2 (PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo])
HSP 1 Score: 336.3 bits (861), Expect = 2.1e-88
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
M+P TK+DIKWSGNKM EGGEV TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQ
Sbjct: 67 MSPYTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQ 126
Query: 61 ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RN
Sbjct: 127 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRN 186
Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
SK I EISHSEEENRNA GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+
Sbjct: 187 SKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVD 246
Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
PEKSETG++L P ISERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 247 SPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295
BLAST of Lsi03G020700 vs. NCBI nr
Match:
XP_011651920.1 (uncharacterized protein LOC105434957 [Cucumis sativus] >KGN58914.1 hypothetical protein Csa_001220 [Cucumis sativus])
HSP 1 Score: 320.5 bits (820), Expect = 1.2e-83
Identity = 183/230 (79.57%), Postives = 201/230 (87.39%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
MAP TK+DIKWSGNKM EGGEV TMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQ
Sbjct: 1 MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQ 60
Query: 61 ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEAS+SSEI +E+EPKT IEV PL +
Sbjct: 61 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSH 120
Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
SK I EI HSEEENRNA GSTSSN SAS+I SD+P KTKIGNCGKE DSVDDSLAIVAV+
Sbjct: 121 SKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVD 180
Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
P KSET ++L P ISERIIEVLNDLK ARERIQ SMK+C+ +MI+V P+
Sbjct: 181 SPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229
BLAST of Lsi03G020700 vs. NCBI nr
Match:
XP_023538931.1 (uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 313.9 bits (803), Expect = 1.1e-81
Identity = 179/229 (78.17%), Postives = 197/229 (86.03%), Query Frame = 0
Query: 1 MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
MA +TK+DIKWSGN MEG EVL TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 1 MAHSTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
Query: 61 TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
T+Q QM+TKAEKKLQLLKKKLESLNLS TM+NSE SISSEI D+DEPKTL L NS
Sbjct: 61 TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDDDEPKTLTTATSLPSNS 120
Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
+ IGEISHS+EEN NA GSTSS+SS SEICS+E K KI N G EF+SV+DSLA+VAVN
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSSSGSEICSNESSKEKIENSGDEFNSVNDSLALVAVNS 180
Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
PE++ETG E+ ISER+IEVLNDLK ARERIQRSMKICELNM+KV PV
Sbjct: 181 PEEAETG-EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228
BLAST of Lsi03G020700 vs. NCBI nr
Match:
KAA0044053.1 (suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa] >TYK25082.1 suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 311.6 bits (797), Expect = 5.6e-81
Identity = 178/214 (83.18%), Postives = 192/214 (89.72%), Query Frame = 0
Query: 16 MEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQ 75
+EGGEV TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQITKQIQMK +AEKKLQ
Sbjct: 2 VEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQIQMKARAEKKLQ 61
Query: 76 LLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRN 135
LLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RNSK I EISHSEEENRN
Sbjct: 62 LLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGINEISHSEEENRN 121
Query: 136 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAIS 195
A GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+ PEKSETG++L P IS
Sbjct: 122 ARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEKSETGEQLKPVIS 181
Query: 196 ERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
ERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 182 ERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 214
BLAST of Lsi03G020700 vs. TAIR 10
Match:
AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )
HSP 1 Score: 59.7 bits (143), Expect = 3.6e-09
Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 0
Query: 5 TKVDIKWSGNKMEGGEV----LITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 64
TK ++ KME E T+ECLR RLLAERQ S AKEEAEL+ ++ ELE+ +
Sbjct: 69 TKCRTNFASKKMEEEEEKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNL 128
Query: 65 TKQIQMKTKAEKKLQLLKKKLE-------SLNLSSTMVNSEASISSEILDEDEPKTLIE- 124
++I+++ KAEK+L+LL KKLE S SS+ V+ +S+ + E+E +T
Sbjct: 129 KEEIRLREKAEKRLKLLMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSG 188
Query: 125 VPPLRRNSKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDS 173
+ A ++ +EE + ++ S+ AS + S K + G EF D+
Sbjct: 189 AVDEGKTDHATENVASTEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 247
BLAST of Lsi03G020700 vs. TAIR 10
Match:
AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )
HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 55/157 (35.03%), Postives = 86/157 (54.78%), Query Frame = 0
Query: 24 TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQLLKKKLE- 83
T+ECLR RLLAERQ S AKEEAEL+ ++ ELE+ + ++I+++ KAEK+L+LL KKLE
Sbjct: 13 TVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKLLMKKLEF 72
Query: 84 ------SLNLSSTMVNSEASISSEILDEDEPKTLIE-VPPLRRNSKAIGEISHSEEENRN 143
S SS+ V+ +S+ + E+E +T + A ++ +EE + +
Sbjct: 73 IKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVASTEEADSS 132
Query: 144 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDS 173
+ S+ AS + S K + G EF D+
Sbjct: 133 SKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 168
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3B6U8 | 1.0e-88 | 83.04 | uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=... | [more] |
| A0A0A0LDB5 | 5.8e-84 | 79.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1 | [more] |
| A0A5A7TKN7 | 2.7e-81 | 83.18 | Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A6J1L305 | 2.3e-80 | 77.73 | uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645... | [more] |
| A0A6J1CXG5 | 2.5e-71 | 71.62 | uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038906280.1 | 5.8e-94 | 87.34 | uncharacterized protein LOC120092141 [Benincasa hispida] | [more] |
| XP_008442604.2 | 2.1e-88 | 83.04 | PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo] | [more] |
| XP_011651920.1 | 1.2e-83 | 79.57 | uncharacterized protein LOC105434957 [Cucumis sativus] >KGN58914.1 hypothetical ... | [more] |
| XP_023538931.1 | 1.1e-81 | 78.17 | uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo] | [more] |
| KAA0044053.1 | 5.6e-81 | 83.18 | suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa] >TYK25082.1 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G37300.2 | 3.6e-09 | 33.89 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT2G37300.1 | 1.0e-08 | 35.03 | unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac... | [more] |
