Lsi03G020620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G020620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr03: 31946997 .. 31949381 (+)
RNA-Seq ExpressionLsi03G020620
SyntenyLsi03G020620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATTCTGAGGCTTGCAAAAGTTCGCCGGATACGAATATCAGAAGGAATGAACTGAGGGGGCCAGTGAAGTGAATCGGTGGATGCAGACCAGGGAACGAATTCTTTGCTTCAATCTGGAACTGGAATCTTTGCCGCGATGCTAATCGGAACCATAATCGCACCTCGTAGTTTTTTCTCGAGAAACAAACAAAAATCATCTTCTTCCTCATCGTCATCGTCTTCTTCTTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAAGCCTAAAGATCCACGAAAAGATGACGATAATGATGATCAGACACGTATGGCATCGGTATCCTTTTCTCTCTTTTGCTGATTTTAAGTTTGATCGTGAGTTCTGCTTCGTTGATGACCTCTCTAGCTACTCTGGATTTTAGTTTGAGCTGTTAGGGAGAGAGGCAAGAATCAACTGGAAACTTTGTTTTAAGAAACTACTCGAGATGGCTTAGAGGCCTTAATATGCTTAATATTATACCATTGTGAATAATGCTCTTGATCGAATGAAGGACGGTTACTTCCAATTTGCCTGCTCTAACTTTAGAGAAGTTGCTCATTCTCCTTAGTATGTCTTAACACGATGCACAACAACATCTGTCTTGTCTCCTTGTTTCTGAACTGAGTGTCGCCCTTGTATTCTTTTATTGAAAGTGGTTGATTTCATAAAATAAAAAGAAGAAAAAAAAAGTTGCATGCCTAGGTATCTCAAGCAAGTTGATAGGTTCTCAAGAGAAGAGACAGAACCAGGTGTTATTTTTAGTATCATCAGCTTGCTTTTGAAGCACTAGGTTCTCAAGAGAAGTTGAGGATTCAACTCTAAAGTGTTAGGTGTGTAAATAAAGTCCCACGTTATGTTGCCCAGAAATGGAAGAAATTCCTTGCCACAGTCATAATGGTATCAGCCCTCAACCACCGTTCCCAGGTTCGATCCCTGACATATGCATTTAAGTATGAGATACCTTTGTAAAAAATTAAAAAGAAAATCACGAGGGCTTATGACTAAAGTGGACAATATTATAGCATTGTGAATATATGTAGAGGTTCCATGTCCTCGGTGTAAGTCGGTTTATACATAACAAACTTTAAATCTTTTTTTTTCCTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGACTTGGAAATAATTGCATTCCTGCTGCCTCTCAGTTTTCGCCTATTTTCTTTTGCATTGTTTTTTTAATAACCATCTGTAATCTTAATTTCCTTTCTATAATTTTATTTTTTTTTGTAGCTCTTCTTCAGTGGTTGGACCAATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTGGGGGGGGGGGGGGGGGGGGGTTGGTTCTTGGAGGTTTGTCCTTTCTAAGTTTAATTTGAAGAGACAACAAGAGTTCTAATTATACTAAGTTGTCAATTGAGAGAATTGAATTCAAGTCTTGAAGGGTATGTTTGAACATCCCAAGCCCTTACATTAGGCCACCATTGGCAGTAACTCGAGTGCTTCTAGTTTGTAAGCTAATTATTTGAATTTTTCAATATCAAATGCTGTAGGATCAATTGATGTTTATTGCTTGAAAATAACTTAACATAAAGTACATGTTTCCCATGTTACTTCACATTGGCCTGGCCTTTTTTGGAGCTAGTGAGTCCACTGTCTGAAGATTCATTAGGGGAATGATAAGGATATTGCTAGGCTTGAATTTGAATCACAATTTGTTGAATTACCAATTATGTCAATCAGGTGATAAGCTCTCAACAGATTGGGACAAGGCTTGGTCCAAGTTCAGAAAGCGAGGAAAAAAGATGATCTTCTCTGATTTCTCTCCAAACAAATACGTAAGCTGGAATCCGCGAAGGTCAGATTATCCATTGTCTGAAGAAGTAGATCCCATAAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTGTCACATTTCTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGATTTTTTCTGGTGTATTGAACTTCCTGGTCTAGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAT

mRNA sequence

AGATTCTGAGGCTTGCAAAAGTTCGCCGGATACGAATATCAGAAGGAATGAACTGAGGGGGCCAGTGAAGTGAATCGGTGGATGCAGACCAGGGAACGAATTCTTTGCTTCAATCTGGAACTGGAATCTTTGCCGCGATGCTAATCGGAACCATAATCGCACCTCGTAGTTTTTTCTCGAGAAACAAACAAAAATCATCTTCTTCCTCATCGTCATCGTCTTCTTCTTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAAGCCTAAAGATCCACGAAAAGATGACGATAATGATGATCAGACACGTGATAAGCTCTCAACAGATTGGGACAAGGCTTGGTCCAAGTTCAGAAAGCGAGGAAAAAAGATGATCTTCTCTGATTTCTCTCCAAACAAATACGTAAGCTGGAATCCGCGAAGGTCAGATTATCCATTGTCTGAAGAAGTAGATCCCATAAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTGTCACATTTCTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGATTTTTTCTGGTGTATTGAACTTCCTGGTCTAGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAT

Coding sequence (CDS)

ATGCTAATCGGAACCATAATCGCACCTCGTAGTTTTTTCTCGAGAAACAAACAAAAATCATCTTCTTCCTCATCGTCATCGTCTTCTTCTTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAAGCCTAAAGATCCACGAAAAGATGACGATAATGATGATCAGACACGTGATAAGCTCTCAACAGATTGGGACAAGGCTTGGTCCAAGTTCAGAAAGCGAGGAAAAAAGATGATCTTCTCTGATTTCTCTCCAAACAAATACGTAAGCTGGAATCCGCGAAGGTCAGATTATCCATTGTCTGAAGAAGTAGATCCCATAAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTGTCACATTTCTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGA

Protein sequence

MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLSTDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK
Homology
[Close]
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match: A0A0A0LAB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           ML+GTIIAPRSFFSRNKQKS SS SSSSSSSPVIPLCSGR+PKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKK +FSDFSPNKYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVI+TFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIITFLLVYTILAPINK 145

[Close]
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match: A0A1S3B6W3 (uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67
Identity = 134/145 (92.41%), Postives = 141/145 (97.24%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           ML+GTIIAPRSFFS NK+KSSSSSSS SSSSPVIPLCSGR+PKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKK IFSDFSP+KYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIIIFLLVYTILAPINK 145

[Close]
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match: A0A6J1J3V4 (uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 131/145 (90.34%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           MLIGT+IAPR FFSRNKQK  SS+SS  SSSPV+PLCSGR+P+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKQK--SSASSPFSSSPVVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFRKRGKK IFSDFSPNKYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match: A0A6J1F162 (uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441439 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 131/145 (90.34%), Postives = 136/145 (93.79%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           MLIGT+IAPR FFSRNK K  SS+SS SSSSP +PLCSGR+P+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKLK--SSASSPSSSSPAVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFRKRGKK IFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match: A0A6J1CVE7 (uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014931 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.2e-64
Identity = 133/150 (88.67%), Postives = 137/150 (91.33%), Query Frame = 0 

Query: 3   IGTIIAPRSFFSRNKQKSSSSSSSSSSS-------SPVIPLCSGRKPKDPRKDDDNDDQT 62
           IGTIIAP SFFSRNKQKSSSS SSSSSS       SPV+PLC GR+PKDP KDDDNDDQT
Sbjct: 9   IGTIIAPHSFFSRNKQKSSSSPSSSSSSSSSVYNCSPVVPLCLGRRPKDPPKDDDNDDQT 68

Query: 63  RDKLSTDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLM 122
           RDK STDWDKAWSKFRKRGKK IFSDFSP+KYVSWNPRRS+YPLSEEVDPIKRTERSNLM
Sbjct: 69  RDKFSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM 128

Query: 123 LWTSPRFTLAGAIVIVTFLLVYTILAPINK 146
           LWTSPRFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 129 LWTSPRFTLAGAIVIVTFLLVYTILAPINK 158

[Close]
BLAST of Lsi03G020620 vs. NCBI nr
Match: XP_038906326.1 (uncharacterized protein LOC120092168 [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 5.7e-71
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGR+PKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFRKRGKK IFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 145

[Close]
BLAST of Lsi03G020620 vs. NCBI nr
Match: XP_004137799.1 (uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical protein Csa_002393 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           ML+GTIIAPRSFFSRNKQKS SS SSSSSSSPVIPLCSGR+PKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKK +FSDFSPNKYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVI+TFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIITFLLVYTILAPINK 145

[Close]
BLAST of Lsi03G020620 vs. NCBI nr
Match: XP_008442626.1 (PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 134/145 (92.41%), Postives = 141/145 (97.24%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           ML+GTIIAPRSFFS NK+KSSSSSSS SSSSPVIPLCSGR+PKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKK IFSDFSP+KYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIIIFLLVYTILAPINK 145

[Close]
BLAST of Lsi03G020620 vs. NCBI nr
Match: KAG7017332.1 (hypothetical protein SDJN02_19196 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           MLIGT+IAPR FFSRNKQK  SS+SS SSSSP +PLCSGR+P+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKQK--SSASSPSSSSPAVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFRKRGKK IFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]
BLAST of Lsi03G020620 vs. NCBI nr
Match: XP_022983966.1 (uncharacterized protein LOC111482428 [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 6.7e-64
Identity = 131/145 (90.34%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRKPKDPRKDDDNDDQTRDKLS 60
           MLIGT+IAPR FFSRNKQK  SS+SS  SSSPV+PLCSGR+P+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKQK--SSASSPFSSSPVVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFRKRGKK IFSDFSPNKYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIVTFLLVYTILAPINK 146
           RFTLAGAIVIVTFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]
BLAST of Lsi03G020620 vs. TAIR 10
Match: AT3G53470.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 9.1e-35
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 37  CSGRKPKDPRKDDDNDDQTRDKLSTDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRSD 96
           CS  +P  PRK ++++    DK STDWDKAW  F+K+ KK +FS F+ +KYV+WNP RS+
Sbjct: 30  CSNNEP--PRKGNESNGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSE 89

Query: 97  YPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPI 144
           + LSEEVDPIKRTERSNLMLWTSPRFTL GAIVIV+FLL+YTILAP+
Sbjct: 90  FDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSFLLLYTILAPV 134

[Close]
BLAST of Lsi03G020620 vs. TAIR 10
Match: AT3G53470.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33
Identity = 73/108 (67.59%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 37  CSGRKPKDPRK-DDDNDDQTRDKLSTDWDKAWSKFRKRGKKMIFSDFSPNKYVSWNPRRS 96
           CS  +P  PRK ++ N     DK STDWDKAW  F+K+ KK +FS F+ +KYV+WNP RS
Sbjct: 30  CSNNEP--PRKGNESNAGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRS 89

Query: 97  DYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPI 144
           ++ LSEEVDPIKRTERSNLMLWTSPRFTL GAIVIV+FLL+YTILAP+
Sbjct: 90  EFDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSFLLLYTILAPV 135

The following BLAST results are available for this feature:
BLAST of Lsi03G020620 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi03G020620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAB41.3e-6893.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1[more]
A0A1S3B6W35.3e-6792.41uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=... [more]
A0A6J1J3V43.2e-6490.34uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428... [more]
A0A6J1F1624.2e-6490.34uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1CVE77.2e-6488.67uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
BLAST of Lsi03G020620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906326.15.7e-7198.62uncharacterized protein LOC120092168 [Benincasa hispida][more]
XP_004137799.12.6e-6893.79uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical ... [more]
XP_008442626.11.1e-6692.41PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo][more]
KAG7017332.11.3e-6491.03hypothetical protein SDJN02_19196 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022983966.16.7e-6490.34uncharacterized protein LOC111482428 [Cucurbita maxima][more]
BLAST of Lsi03G020620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53470.19.1e-3567.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G53470.21.0e-3367.59unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..59
NoneNo IPR availablePANTHERPTHR360432,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASEcoord: 6..143
NoneNo IPR availablePANTHERPTHR36043:SF12,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASEcoord: 6..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G020620.1Lsi03G020620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane