
Lsi03G020090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCATTCCATTGCTGTAGATAAGCAGATAGAACGACAAACCAGAAAGAAGCAGTGCTTTCTGAGAAGCCAAAGCGAGAGGGACGAAGAAATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACGCCGACCCAGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTTCTCACATGGTTCAATCCTTACATGTGGCAACTCTCCAATCAGTTCAAGTACTCGTTTCTTTCTTTCTCAGGGAAATGTTTGAATTCGTGTTCTGCTCTGCAATTCGCCTTCCTGCTTCATTACTCTGTTGTTATAGTACTGATGTTCAATTTCTGTAGCAATAGCTTCACATTCTTTTTGGTGGGTCGGTTTTGAAATCAATTTTTACTGGAGTTCGACTTTGATAAGGAAATGTTTTAGGGTTTTACGAACCCAGTTGACCTTATCGCTCTAGAAGTTTGAGTGACTGTAGATGATTCAGTTTCATTGCCTGTATAGTGATAATCTCATCGCTTATTATTCAAGTAGCTGTGAAATTCGAAATTTATATTGTATAGTGATAATCTTTTACTTATTATTCCTTGCCTGTATAGGAAAGAACATCTTCTGTTCTGAAGAGTTGCTTCTGTTATTGGAATTTATTTTCTTTTTACATTAGAATTTATGCGATCCTCCAGAAAACAATTTTCGCCAACGCTTCTACCTGTACTGAAAAGAGACAAGAATATAAATTGTTTTTCCTTCTGGCAAGTATATGAACTATCATAATTATATATGATTTTCTTCTTATGTTGTTCAATTCTAATCATGTTTTTCGGATTCTGCTTCTTTTAGTCTTGAGAAACACTCTCGTAAATGAATCTGATATAGTGGATTTTTAGGACATGTTGATGCCTTATGTTATCACTTGGTTCATTAATGTTGTCTTATTACTTAGAAGTGAACTAGAAGCACTAGTCTAAATTTGATGAAATGTACATGCGGGTTTTCTGATAAAGGTGTGATATTGGCATCGTTTTTTGTTGTTTTTTTGTACACTTATTCTTTCCATTATTCCCATTAGAGATCGTGGGCATGGGCTGTGATTCTTTATCTTGTTTTTGCTGTTACTGTTTTGCAATTGTAATCTTTATTCTCAGTTCATATTTGAACTATGAATTCTCAATTTGTAATTTGTAGTTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCACGTCAAAAGAATCAGCCATACCAATTCAAGGTACAATGTTCTACTCCAGTTTATATGGAAGCAAACAAACATTTATTATTGCATTTGAACAACGTTATACTTTTAATATCTCATGGAATGGCTATGTTGTTCTTATAAAAACTTCATTGCTGCAGTGGAATCAGTACATGGACAAGTACCACCGGGATTCCTATTATTATAACTGGCCTGTGTACTTTCCTTAGGCTCTCTGATTATGTAAGAAAACCGTTGCTTGACTGCTTAGTTATTTGGCTTGTTTCGGTGGCAAACAGAGATTACTATTACACTAAGGCTCGAAGGTCTATGGATGTGTAGAATCATATTTCTTTTGACCAGTTTGGATAACGGTTTTGTCGTGTGGTCGCCCTATACTGTAGTAATGATATTGAGAATGGATGAATTGTACCAGGTACCATTTGCAATTATATGATAAAGATCTGAAAGGGCATTTTATATCATACTGATATGGAACATAGAAACTGAAACAAGTGCTAAAACTGGGTGGTCAGATGCTCAAATGAGATTTTAACTTCCTCTCTCATAATCAATAGATAATATAACATACCCTTTGGCTTTGATCTATGAACATTTTCATAATTTTTTTCTTTTAACAATACATGGGGTGGGGGAATTAAACCTCTAACCTTGAGGTTGAAAGCACATGCCTTATGCCCGTTGAGCTATGTTCTTTTTGGCACATTTTCATCATTTTGCTGGGGTATTGTATAGAGCTTAGATCTTGATTTCTTCTTGCTTATCTTTTACGATATACCTCTTTACATATAATTCCTGGATCGTTCGAAAATTCTTAGATCTGATAGAAACGATCAAATTATTATCATTCTCAGTCTCTTACAGGTGGGGTGTTCTGATTCTAAGATGAAGCAGAAACCCAATTTTCTCATTTATGGATATGGGTTTCTTAGCACAGCTTCACCATTGCTGTACTGTATTAGTCAAGGCCCAAAGTGGAATACTATGGGCCTTAAAGCTCTATCTGTTGCCATGTTTTGAAGAACTGTAACCCCATTTTGAAAAGCACCCACAATTCAGCTTTACAATCACTATGCATAAAGGAAAAAGGGTCATAATGTCCAAAGTAAAGCATCTTCATTCCCACCCAAGGAAAAGCTGTTGAATCAAAAGATGAGAAAGAAGAAAAAAAGAAAAAGAAAAAAGTAAGAAAACAGTGCAGAGGAGGATTTCAACCAAGTTTTAGAGAAGACCCTTTTCTTTTCTTCCTTCCATTAGCTTATCTAATTGTGAAAGTCAAGAATCAAAATGATTATGGTTATCAACTTCATTCTTCATCATGATGATTTTCTCTTAAGACATTGTTCATTCTTCTATACATTAAAATGGGTGAATTTCCCTTTATGCCATCGTACATGCAAAATAACCTTCTAAATGGTAGTGAAACATAGCTTTCAAGGTCAAATATGATTGATCTTTTATGATTTAGGCTTGGGTTTATTCTAGTCTATACGGTTTTAAAAGTTTTGATATGTTCTTGTAATTTGGTTAACTGTTATAATCCATCCCAAACCATCTCTTTTTCCATTTGT ATGGCGCATTCCATTGCTGTAGATAAGCAGATAGAACGACAAACCAGAAAGAAGCAGTGCTTTCTGAGAAGCCAAAGCGAGAGGGACGAAGAAATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACGCCGACCCAGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTTCTCACATGGTTCAATCCTTACATGTGGCAACTCTCCAATCAGTTCAAGTACTCGTTTCTTTCTTTCTCAGGGAAATGTTTGAATTCGTGTTCTGCTCTGCAATTCGCCTTCCTGCTTCATTACTCTGTTGTTATAGTACTGATGTTCAATTTCTGTAGCAATAGCTTCACATTCTTTTTGGTGGTTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCACGTCAAAAGAATCAGCCATACCAATTCAAGTGGAATCAGTACATGGACAAGTACCACCGGGATTCCTATTATTATAACTGGCCTGTGTACTTTCCTTAGGCTCTCTGATTATGTAAGAAAACCGTTGCTTGACTGCTTAGTTATTTGGCTTGTTTCGGTGGCAAACAGAGATTACTATTACACTAAGGCTCGAAGGTCTATGGATGTGTAGAATCATATTTCTTTTGACCAGTTTGGATAACGGTTTTGTCGTGTGGTCGCCCTATACTGTAGTAATGATATTGAGAATGGATGAATTGTACCAGGTACCATTTGCAATTATATGATAAAGATCTGAAAGGGCATTTTATATCATACTGATATGGAACATAGAAACTGAAACAAGTGCTAAAACTGGGTGGTCAGATGCTCAAATGAGATTTTAACTTCCTCTCTCATAATCAATAGATAATATAACATACCCTTTGGCTTTGATCTATGAACATTTTCATAATTTTTTTCTTTTAACAATACATGGGGTGGGGGAATTAAACCTCTAACCTTGAGGTTGAAAGCACATGCCTTATGCCCGTTGAGCTATGTTCTTTTTGGCACATTTTCATCATTTTGCTGGGGTATTGTATAGAGCTTAGATCTTGATTTCTTCTTGCTTATCTTTTACGATATACCTCTTTACATATAATTCCTGGATCGTTCGAAAATTCTTAGATCTGATAGAAACGATCAAATTATTATCATTCTCAGTCTCTTACAGGTGGGGTGTTCTGATTCTAAGATGAAGCAGAAACCCAATTTTCTCATTTATGGATATGGGTTTCTTAGCACAGCTTCACCATTGCTGTACTGTATTAGTCAAGGCCCAAAGTGGAATACTATGGGCCTTAAAGCTCTATCTGTTGCCATGTTTTGAAGAACTGTAACCCCATTTTGAAAAGCACCCACAATTCAGCTTTACAATCACTATGCATAAAGGAAAAAGGGTCATAATGTCCAAAGTAAAGCATCTTCATTCCCACCCAAGGAAAAGCTGTTGAATCAAAAGATGAGAAAGAAGAAAAAAAGAAAAAGAAAAAAGTAAGAAAACAGTGCAGAGGAGGATTTCAACCAAGTTTTAGAGAAGACCCTTTTCTTTTCTTCCTTCCATTAGCTTATCTAATTGTGAAAGTCAAGAATCAAAATGATTATGGTTATCAACTTCATTCTTCATCATGATGATTTTCTCTTAAGACATTGTTCATTCTTCTATACATTAAAATGGGTGAATTTCCCTTTATGCCATCGTACATGCAAAATAACCTTCTAAATGGTAGTGAAACATAGCTTTCAAGGTCAAATATGATTGATCTTTTATGATTTAGGCTTGGGTTTATTCTAGTCTATACGGTTTTAAAAGTTTTGATATGTTCTTGTAATTTGGTTAACTGTTATAATCCATCCCAAACCATCTCTTTTTCCATTTGT ATGGCGCATTCCATTGCTGTAGATAAGCAGATAGAACGACAAACCAGAAAGAAGCAGTGCTTTCTGAGAAGCCAAAGCGAGAGGGACGAAGAAATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACGCCGACCCAGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTTCTCACATGGTTCAATCCTTACATGTGGCAACTCTCCAATCAGTTCAAGTACTCGTTTCTTTCTTTCTCAGGGAAATGTTTGAATTCGTGTTCTGCTCTGCAATTCGCCTTCCTGCTTCATTACTCTGTTGTTATAGTACTGATGTTCAATTTCTGTAGCAATAGCTTCACATTCTTTTTGGTGGTTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCACGTCAAAAGAATCAGCCATACCAATTCAAGTGGAATCAGTACATGGACAAGTACCACCGGGATTCCTATTATTATAACTGGCCTGTGTACTTTCCTTAGGCTCTCTGATTATGTAAGAAAACCGTTGCTTGACTGCTTAGTTATTTGGCTTGTTTCGGTGGCAAACAGAGATTACTATTACACTAAGGCTCGAAGGTCTATGGATGTGTAG MAHSIAVDKQIERQTRKKQCFLRSQSERDEEMEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSNSFTFFLVVGMTKRFCLSNTTGKRHVKRISHTNSSGISTWTSTTGIPIIITGLCTFLRLSDYVRKPLLDCLVIWLVSVANRDYYYTKARRSMDV Homology
BLAST of Lsi03G020090 vs. ExPASy TrEMBL
Match: A0A5D3DNH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002690 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 4.2e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Lsi03G020090 vs. ExPASy TrEMBL
Match: A0A7G2EL77 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS10561 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.9e-26 Identity = 79/143 (55.24%), Postives = 90/143 (62.94%), Query Frame = 0
BLAST of Lsi03G020090 vs. ExPASy TrEMBL
Match: A0A7J9LHD3 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_016979 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24 Identity = 76/152 (50.00%), Postives = 90/152 (59.21%), Query Frame = 0
BLAST of Lsi03G020090 vs. ExPASy TrEMBL
Match: A0A7J8PFY2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=Gorai_001142 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24 Identity = 75/152 (49.34%), Postives = 88/152 (57.89%), Query Frame = 0
BLAST of Lsi03G020090 vs. ExPASy TrEMBL
Match: A0A7J9J7C6 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_014844 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24 Identity = 75/154 (48.70%), Postives = 90/154 (58.44%), Query Frame = 0
BLAST of Lsi03G020090 vs. NCBI nr
Match: KAA0043996.1 (hypothetical protein E6C27_scaffold236G003420 [Cucumis melo var. makuwa] >TYK25144.1 hypothetical protein E5676_scaffold352G002690 [Cucumis melo var. makuwa]) HSP 1 Score: 134.8 bits (338), Expect = 8.7e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Lsi03G020090 vs. NCBI nr
Match: CAD5322558.1 (unnamed protein product [Arabidopsis thaliana]) HSP 1 Score: 128.3 bits (321), Expect = 8.1e-26 Identity = 79/143 (55.24%), Postives = 90/143 (62.94%), Query Frame = 0
BLAST of Lsi03G020090 vs. NCBI nr
Match: MBA0857769.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 122.9 bits (307), Expect = 3.4e-24 Identity = 76/152 (50.00%), Postives = 90/152 (59.21%), Query Frame = 0
BLAST of Lsi03G020090 vs. NCBI nr
Match: MBA0588026.1 (hypothetical protein [Gossypium raimondii]) HSP 1 Score: 122.5 bits (306), Expect = 4.5e-24 Identity = 75/152 (49.34%), Postives = 88/152 (57.89%), Query Frame = 0
BLAST of Lsi03G020090 vs. NCBI nr
Match: MBA0830302.1 (hypothetical protein [Gossypium armourianum]) HSP 1 Score: 122.5 bits (306), Expect = 4.5e-24 Identity = 75/154 (48.70%), Postives = 90/154 (58.44%), Query Frame = 0
BLAST of Lsi03G020090 vs. TAIR 10
Match: AT3G09860.1 (unknown protein; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.1 bits (279), Expect = 5.6e-25 Identity = 49/52 (94.23%), Postives = 49/52 (94.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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