Lsi03G019800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G019800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PWWP domain protein
Location	chr03: 31181355 .. 31187215 (-)
RNA-Seq Expression	Lsi03G019800
Synteny	Lsi03G019800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAATTTATAATGGCCCATTCTTAGTGTTATAGGAATTGGGAATTCTTCACTGCCCCCCATTCTATTCTCTCATTCAGATCCACTGCCAAACAAATCCCCTTCTTCTTCTTCTTCTTCTAGGGCTCCTTCTTTACCTCAGTAATTCAATTTTCAAAGCGTTATCTCAATTTCTTGACAATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGTATTTCTTTTAATTTATCCCTTTTGGTTTTTGATACTCTGTGAACTAACCTAATTTTCTGATTAACTTTTGGGATTTGTTTGTGTACTCAATTTGAGATCTCTTGACTTTCCTTACTTGTTCTTTTGATTGTCATCATATTATTATATTTGATTGCAGGTTAAAGCTAGACATTAATTGTATGACCCTGTATTTTCATCTGGTTCTTGGATAGAAAAATTTAGTCTTTAGACTGATTCATGTAATTGTGCCTATTTTCAGTTATAATACTCACTATTATGTGTTAGTTAGTTCTTTTCATTCACAAATGGACTATAATTTACATCCATAATTCTAGGAACAGTTGAAAATAGAGGGTAGGAGTTGTTTGTGGTTATTGTGTTCCATATTGTGTATCTTGGGAAGTTCAAATCTGAAAGAATATGAATTGTCAAGTTAGTAAGTTGTGTTCGAATTCTAATGATTTAGTGTCAGATGATCCCTACCCCTGCCGGCAATTTCCCATTACCATGTTGCCTTCTTGGAGGTGGTCTCTCTCAGTTGGGTATTCATAGTGTAGTTGGCATTTAGGTGAAATCCGTGGCTCCTAGCAAGCGGAATGTGTCAATGAATGATATAATTATGATTTAATGTTTGTTGATATGATGGAAATTATGACGAGATGCATCTATGTATATCATCCAATATAAGAATCAAGATATTGTTGACTACTTCTTGTTTATTTATTGTTACTTGTATCGATATTTGTTGCATCAGAAATGTCTGGCTCGATAGATCCTGTATAGCAATTAGCAATTCTGCAAGTTTTATCTTTTATTTCATGTTTCTTGATCGTTTCCTGTTGAGGTGTGCTCTGGACATCTTCTATTTGTTTCTGTTTTCTATAATATTTTTTAAATGAAAAGTCTCAATGTTAGATTTGGATTATATGGTATATGATTGAAACTGAACCTGAAGTTTTCGGGACATGTTAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGGTCTGTTTTTTTCTATGTTAACCTGTTGTTAAATATCCACTTTCAATCTTCTTTTCTCTATTCATATTAGTAACTGTTTTGATTATCCTTTTTCAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAGTAAGTAATGTGCCATTCTCGGTCATTAAATTTGAAAAAACAAAACCTTTTTAGTCTGAATTTTTTAGCTCTATATTTTAATTTTCATTTAGAATTATCCGGCCTTTCTACTTTCCCTTTTAATGTCCATGCTTAAAACTCTGTGCCTGACATTTACCTTCAGAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGGTATGCACTTAATTTTTATTTCAGTATCTGCCATTTTGTTTTGGAGTTATTTTGGAGATACTATTCCTGCCAAAAACACTATGTTTTCTGAAATTGAAAGAAAATTATTTTTTATCATTAAGCTCAGAAACATGTCCACTATCTTCCATTTTGCAATACATTCTGATCATTAAGCTCGGGAAGAAACCTATCACATTTGGAGAAATTTGTTAACATTTCTGTATGCGAGGTGGGAGATGATAATTCTTTTCATACTGAGGATGCATGTTTGAAAGATCAATGTCTCCCAGATCCCTTGTATTCATTTTGTTATATCATGTTGCTCCCTTGGGGTTTTCTTACCTGATATCAAATGCGAATAAAAATTTCGTTTTATGCTAGAGCTAACTATAAATTTAAAAAATTGTACCACAACTTGTATACTTAGAAGTAACACAACTTTCCCCACTCTTAGGCCTGTGAATCTGTATTGACTCCTTTCATTTATATCTTATCTTTTTTTACTGTCTTCTTTAAGCAGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGTACACCTAGACAGAGGAAGAGGAAAAAGGGAAAGAAAGNTCTTCACTGCCCCCCATTCTATTCTCTCATTCAGATCCACTGCCAAACAAATCCCCTTCTTCTTCTTCTTCTTCTAGGGCTCCTTCTTTACCTCAGTAATTCAATTTTCAAAGCGTTATCTCAATTTCTTGACAATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGTATTTCTTTTAATTTATCCCTTTTGGTTTTTGATACTCTGTGAACTAACCTAATTTTCTGATTAACTTTTGGGATTTGTTTGTGTACTCAATTTGAGATCTCTTGACTTTCCTTACTTGTTCTTTTGATTGTCATCATATTATTATATTTGATTGCAGGTTAAAGCTAGACATTAATTGTATGACCCTGTATTTTCATCTGGTTCTTGGATAGAAAAATTTAGTCTTTAGACTGATTCATGTAATTGTGCCTATTTTCAGTTATAATACTCACTATTATGTGTTAGTTAGTTCTTTTCATTCACAAATGGACTATAATTTACATCCATAATTCTAGGAACAGTTGAAAATAGAGGGTAGGAGTTGTTTGTGGTTATTGTGTTCCATATTGTGTATCTTGGGAAGTTCAAATCTGAAAGAATATGAATTGTCAAGTTAGTAAGTTGTGTTCGAATTCTAATGATTTAGTGTCAGATGATCCCTACCCCTGCCGGCAATTTCCCATTACCATGTTGCCTTCTTGGAGGTGGTCTCTCTCAGTTGGGTATTCATAGTGTAGTTGGCATTTAGGTGAAATCCGTGGCTCCTAGCAAGCGGAATGTGTCAATGAATGATATAATTATGATTTAATGTTTGTTGATATGATGGAAATTATGACGAGATGCATCTATGTATATCATCCAATATAAGAATCAAGATATTGTTGACTACTTCTTGTTTATTTATTGTTACTTGTATCGATATTTGTTGCATCAGAAATGTCTGGCTCGATAGATCCTGTATAGCAATTAGCAATTCTGCAAGTTTTATCTTTTATTTCATGTTTCTTGATCGTTTCCTGTTGAGGTGTGCTCTGGACATCTTCTATTTGTTTCTGTTTTCTATAATATTTTTTAAATGAAAAGTCTCAATGTTAGATTTGGATTATATGGTATATGATTGAAACTGAACCTGAAGTTTTCGGGACATGTTAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGGTCTGTTTTTTTCTATGTTAACCTGTTGTTAAATATCCACTTTCAATCTTCTTTTCTCTATTCATATTAGTAACTGTTTTGATTATCCTTTTTCAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAGTAAGTAATGTGCCATTCTCGGTCATTAAATTTGAAAAAACAAAACCTTTTTAGTCTGAATTTTTTAGCTCTATATTTTAATTTTCATTTAGAATTATCCGGCCTTTCTACTTTCCCTTTTAATGTCCATGCTTAAAACTCTGTGCCTGACATTTACCTTCAGAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGGTATGCACTTAATTTTTATTTCAGTATCTGCCATTTTGTTTTGGAGTTATTTTGGAGATACTATTCCTGCCAAAAACACTATGTTTTCTGAAATTGAAAGAAAATTATTTTTTATCATTAAGCTCAGAAACATGTCCACTATCTTCCATTTTGCAATACATTCTGATCATTAAGCTCGGGAAGAAACCTATCACATTTGGAGAAATTTGTTAACATTTCTGTATGCGAGGTGGGAGATGATAATTCTTTTCATACTGAGGATGCATGTTTGAAAGATCAATGTCTCCCAGATCCCTTGTATTCATTTTGTTATATCATGTTGCTCCCTTGGGGTTTTCTTACCTGATATCAAATGCGAATAAAAATTTCGTTTTATGCTAGAGCTAACTATAAATTTAAAAAATTGTACCACAACTTGTATACTTAGAAGTAACACAACTTTCCCCACTCTTAGGCCTGTGAATCTGTATTGACTCCTTTCATTTATATCTTATCTTTTTTTACTGTCTTCTTTAAGCAGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGTACACCTAGACAGAGGAAGAGGAAAAAGGGAAAGAAAGCCAAAAGTTCCCTTCGATGTAAGTTAATGTCTCAATCTTTTTTTTTTTTCCAATGCATGGAAAACACAAATAAGAGCAGTTCTATATTATGATAAAATAATTTTCTTCTGTAGGAAGAGATGACCATATCTCTTAAATCAACAAGAAAGTTTCGCCGAATGAGGATTATGCGGTACCTTGGGCTTGCAGCTCCAGTTGGTTCTCCTTTTTCACCAATTGCCTGAGCCATAATCCAATCCAACTTCCTAGTAAAGTCTACATTCTACAATATTCAGTTAATCTTTCAACTCATTTTGCATTAGTGAAAAGTTGCTAATTTTTGTTCTCATATTTATCCCAGCATATATGGTTTCATCATTTGTAAATAGGCTGAGGTTTTGATAACATTAATTAGAGAATCCTGTTTCAAAGAAGCCTGTCTATCTTCAATTCCCTTGTCTCAATACTACATGGAATGTTCCTTGACATTTAATTTAAATCAGTGTGCACAAGTTGAAATTGTGATGGTCTTGAATCTGTGGATGGACATCTCTCTCCAGTCGTGGGTCTATTTGAAGTTGGGGACATCTTGTTTTTTGGCCAATCAAGGAGATGGAAAATGTTATAGGAATGTGGCTTTATGCAGCAAGTTTCCATTGAGGTATTGCCTGTTGGTTTGATAAATTATGACTGCCTGAAAGAAATCTCTGCACACTTATTATCCATGTTTGGTTCACCACATAGATAAATGTGAATTTGTATAGTTTTGATCTGTTTAATAATCATCTTGTTGTTAGTTTT

mRNA sequence

TGGGAATTTATAATGGCCCATTCTTAGTGTTATAGGAATTGGGAATTCTTCACTGCCCCCCATTCTATTCTCTCATTCAGATCCACTGCCAAACAAATCCCCTTCTTCTTCTTCTTCTTCTAGGGCTCCTTCTTTACCTCAGTAATTCAATTTTCAAAGCGTTATCTCAATTTCTTGACAATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGGCTCCTTCTTTACCTCAGTAATTCAATTTTCAAAGCGTTATCTCAATTTCTTGACAATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGTACACCTAGACAGAGGAAGAGGAAAAAGGGAAAGAAAGCCAAAAGTTCCCTTCGATGAAGAGATGACCATATCTCTTAAATCAACAAGAAAGTTTCGCCGAATGAGGATTATGCGGTACCTTGGGCTTGCAGCTCCAGTTGGTTCTCCTTTTTCACCAATTGCCTGAGCCATAATCCAATCCAACTTCCTATGTGCACAAGTTGAAATTGTGATGGTCTTGAATCTGTGGATGGACATCTCTCTCCAGTCGTGGGTCTATTTGAAGTTGGGGACATCTTGTTTTTTGGCCAATCAAGGAGATGGAAAATGTTATAGGAATGTGGCTTTATGCAGCAAGTTTCCATTGAGGTATTGCCTGTTGGTTTGATAAATTATGACTGCCTGAAAGAAATCTCTGCACACTTATTATCCATGTTTGGTTCACCACATAGATAAATGTGAATTTGTATAGTTTTGATCTGTTTAATAATCATCTTGTTGTTAGTTTT

Coding sequence (CDS)

ATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGGCTCCTTCTTTACCTCAGTAATTCAATTTTCAAAGCGTTATCTCAATTTCTTGACAATGGCGAAGAAGAGAAAGACGCCCCAGAAGAAAAAGGGCGAAAAACAATCACCCCTTATCGATAATATACCCAAGTATTCTCAACAGCGCCGAAGCTCACCGCCTAAACGCCGCACTGATTTCTCCTCTCTCTTTTGCTATTCTTCTTCAATTGCCCGTCGAGGCACATCTGCCTTGCCACGATTGTCGTTGAATGAAGTTGGATTGTCAAAATTGATAGTGAATCACTCAGATAATACAAATGAAGAACTCTCTTCTAGCTCTTTGGTGAAATGCAGCAACTCCCTGGGGGAAGATGAAGAACTAAGCCTATGCTCAAGTCCTGATGAAATGCAATCAGTTGAATGCCGCCTCAGCGATAGTTCATGCAAGGCTGTAAGCAAGAGAAAAGGTACTTCTAAGATATCATACCCTGTTGGTAAAAAATTACCAGATTCAGAAAGCAACAGTCTTTCTGAAACTCCAGAGAATGTACAGCTGTGGTCTACTGAAAGTTTCGAGGAGAGGAGTTCAAACACAACGGTAGAGTTTCAAGATCAATCATGTGATAAGGGGTCTTCATCAAACTCAAGCAGGATTGAAGATAATGACGTACACCTAGACAGAGGAAGAGGAAAAAGGGAAAGAAAGCCAAAAGTTCCCTTCGATGAAGAGATGACCATATCTCTTAAATCAACAAGAAAGTTTCGCCGAATGAGGATTATGCGGTACCTTGGGCTTGCAGCTCCAGTTGGTTCTCCTTTTTCACCAATTGCCTGA

Protein sequence

MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALPRLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSDSSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDNDGSFFTSVIQFSKRYLNFLTMAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALPRLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSDSSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGLAAPVGSPFSPIA

Homology

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BLAST of Lsi03G019800 vs. ExPASy TrEMBL
Match: A0A0A0LAN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743960 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121
Identity = 256/335 (76.42%), Postives = 274/335 (81.79%), Query Frame = 0


Query: 141 KKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDNDGSF 200
           K    S S+S S +  +    S+ S    SS+++      S    SSS+SS    +  S 
Sbjct: 253 KSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 312

Query: 201 FTS-------VIQFSKRYLNFLTMAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKR 260
           F+S          F + YLNFLTMAKKRKT QKKKGEKQSPLIDNIPKYSQQRRSSPPKR
Sbjct: 313 FSSRAPSLPQEFNFQRVYLNFLTMAKKRKTSQKKKGEKQSPLIDNIPKYSQQRRSSPPKR 372

Query: 261 RTDFSSLFCYSSSIARRGTSALPRLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLG 320
           RTDFSSLF YSSSI  + T+AL RLSLNEVG SKL+V+HSDNT EELSSSSLVKCSNSL 
Sbjct: 373 RTDFSSLFFYSSSIPHQDTAALLRLSLNEVGSSKLMVHHSDNTTEELSSSSLVKCSNSLE 432

Query: 321 EDEELSLCSSPDEMQSVECRLSDSSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPEN 380
            DE LSLCSSPDEMQSVEC LS+SSCKAVSKRKGTSKIS+PVGKKLPDSESNSLS TPEN
Sbjct: 433 VDEGLSLCSSPDEMQSVECHLSNSSCKAVSKRKGTSKISFPVGKKLPDSESNSLSGTPEN 492

Query: 381 VQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDE 440
           VQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDE
Sbjct: 493 VQLWSTESFEERSSNTTVEFQDQSCDKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDE 552

Query: 441 EMTISLKSTRKFRRMRIMRYLGLAAPVGSPFSPIA 469
           EMTISLKSTRKFRRMRIMRYLGLAAPVGSPFSPIA
Sbjct: 553 EMTISLKSTRKFRRMRIMRYLGLAAPVGSPFSPIA 587

[Close]

BLAST of Lsi03G019800 vs. ExPASy TrEMBL
Match: A0A5D3DNG7 (PWWP domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002990 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT  KKKGE QSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  +  +AL 
Sbjct: 1   MAKKRKTSPKKKGETQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDPAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+VNHSDNTNEELSSSSLVKCSNSL EDE LSLCSSPDEMQSVECRLS+
Sbjct: 61  RLSLNEVGSSKLMVNHSDNTNEELSSSSLVKCSNSLEEDEGLSLCSSPDEMQSVECRLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSC    KRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSC----KRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 456
           SCDKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL
Sbjct: 181 SCDKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 240

Query: 457 AAPVGSPFSPIA 469
           AAPVGSPFSPIA
Sbjct: 241 AAPVGSPFSPIA 248

[Close]

BLAST of Lsi03G019800 vs. ExPASy TrEMBL
Match: A0A1S3B734 (uncharacterized protein LOC103486526 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486526 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT  KKKGE QSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  +  +AL 
Sbjct: 1   MAKKRKTSPKKKGETQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDPAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+VNHSDNTNEELSSSSLVKCSNSL EDE LSLCSSPDEMQSVECRLS+
Sbjct: 61  RLSLNEVGSSKLMVNHSDNTNEELSSSSLVKCSNSLEEDEGLSLCSSPDEMQSVECRLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSC    KRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSC----KRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 456
           SCDKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL
Sbjct: 181 SCDKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 240

Query: 457 AAPVGSPFSPIA 469
           AAPVGSPFSPIA
Sbjct: 241 AAPVGSPFSPIA 248

[Close]

BLAST of Lsi03G019800 vs. ExPASy TrEMBL
Match: A0A6J1J672 (uncharacterized protein LOC111481710 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481710 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 209 KRYLNFLTMAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIA 268
           K +L FLTMAKKR+T Q+KKG++Q PLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIA
Sbjct: 46  KAHLEFLTMAKKRETSQRKKGKRQPPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIA 105

Query: 269 RRGTSALPRLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQ 328
            +GT+ LP+ SL          NHSDNTNEELSSSSLVKCSNS GED+ELS CSSPD++Q
Sbjct: 106 HQGTTVLPQFSL----------NHSDNTNEELSSSSLVKCSNSSGEDDELSQCSSPDDIQ 165

Query: 329 SVECRLSDSSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSN 388
           SVECRLS+SSCKA+SKRKGTSKISYPV KKLPDSESNSLSETPENVQLWSTESFEERSSN
Sbjct: 166 SVECRLSESSCKALSKRKGTSKISYPVRKKLPDSESNSLSETPENVQLWSTESFEERSSN 225

Query: 389 TTVEFQDQSCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRM 448
           TT EFQDQSCDKGSSSNSSRIEDND+H+DR RGKRERKPKVPFDEE TIS+K+TRKFRRM
Sbjct: 226 TTAEFQDQSCDKGSSSNSSRIEDNDLHVDRRRGKRERKPKVPFDEETTISVKATRKFRRM 285

Query: 449 RIMRYLGLAAPVGSPFSPIA 469
           RIMRYLGLAAPVGSPFSPIA
Sbjct: 286 RIMRYLGLAAPVGSPFSPIA 295

[Close]

BLAST of Lsi03G019800 vs. ExPASy TrEMBL
Match: A0A5A7TQ68 (PWWP domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003120 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 228/253 (90.12%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT  KKKGE QSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  +  +AL 
Sbjct: 1   MAKKRKTSPKKKGETQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDPAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+VNHSDNTNEELSSSSLVKCSNSL EDE LSLCSSPDEMQSVECRLS+
Sbjct: 61  RLSLNEVGSSKLMVNHSDNTNEELSSSSLVKCSNSLEEDEGLSLCSSPDEMQSVECRLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSC    KRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSC----KRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SC-DKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 456
           SC DKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG
Sbjct: 181 SCADKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 240

Query: 457 LAAPVGSPFSPIA 469
           LAAPVGSPFSPIA
Sbjct: 241 LAAPVGSPFSPIA 249

[Close]

BLAST of Lsi03G019800 vs. NCBI nr
Match: XP_038905235.1 (uncharacterized protein LOC120091323 isoform X2 [Benincasa hispida])

HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-122
Identity = 237/252 (94.05%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKTPQ+KKGE Q PL+DNIPKYSQQRRSSPPKRRTDFSSLFCYSSSI   GTSALP
Sbjct: 1   MAKKRKTPQRKKGETQLPLVDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIVHHGTSALP 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           +LSLNEVG SKLIVNHSD+TNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQS+ECRLSD
Sbjct: 61  QLSLNEVGSSKLIVNHSDSTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSIECRLSD 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSCKAVSKRKGTSKIS+PVGKK+PDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSCKAVSKRKGTSKISFPVGKKVPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 456
           SCDKGSSSNSSRIEDND+HLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL
Sbjct: 181 SCDKGSSSNSSRIEDNDLHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 240

Query: 457 AAPVGSPFSPIA 469
           AAPVGSPFSPIA
Sbjct: 241 AAPVGSPFSPIA 252

[Close]

BLAST of Lsi03G019800 vs. NCBI nr
Match: XP_038905234.1 (uncharacterized protein LOC120091323 isoform X1 [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 3.9e-121
Identity = 237/253 (93.68%), Postives = 245/253 (96.84%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKTPQ+KKGE Q PL+DNIPKYSQQRRSSPPKRRTDFSSLFCYSSSI   GTSALP
Sbjct: 1   MAKKRKTPQRKKGETQLPLVDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIVHHGTSALP 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           +LSLNEVG SKLIVNHSD+TNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQS+ECRLSD
Sbjct: 61  QLSLNEVGSSKLIVNHSDSTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSIECRLSD 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSCKAVSKRKGTSKIS+PVGKK+PDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSCKAVSKRKGTSKISFPVGKKVPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SC-DKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 456
           SC DKGSSSNSSRIEDND+HLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG
Sbjct: 181 SCADKGSSSNSSRIEDNDLHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 240

Query: 457 LAAPVGSPFSPIA 469
           LAAPVGSPFSPIA
Sbjct: 241 LAAPVGSPFSPIA 253

[Close]

BLAST of Lsi03G019800 vs. NCBI nr
Match: XP_004137983.1 (uncharacterized protein LOC101217493 isoform X2 [Cucumis sativus] >KAE8651053.1 hypothetical protein Csa_001599 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.4e-115
Identity = 231/252 (91.67%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT QKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  + T+AL 
Sbjct: 1   MAKKRKTSQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDTAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+V+HSDNT EELSSSSLVKCSNSL  DE LSLCSSPDEMQSVEC LS+
Sbjct: 61  RLSLNEVGSSKLMVHHSDNTTEELSSSSLVKCSNSLEVDEGLSLCSSPDEMQSVECHLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSCKAVSKRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSCKAVSKRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 456
           SCDKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL
Sbjct: 181 SCDKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 240

Query: 457 AAPVGSPFSPIA 469
           AAPVGSPFSPIA
Sbjct: 241 AAPVGSPFSPIA 252

[Close]

BLAST of Lsi03G019800 vs. NCBI nr
Match: XP_031739028.1 (uncharacterized protein LOC101217493 isoform X1 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 6.0e-114
Identity = 231/253 (91.30%), Postives = 238/253 (94.07%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT QKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  + T+AL 
Sbjct: 1   MAKKRKTSQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDTAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+V+HSDNT EELSSSSLVKCSNSL  DE LSLCSSPDEMQSVEC LS+
Sbjct: 61  RLSLNEVGSSKLMVHHSDNTTEELSSSSLVKCSNSLEVDEGLSLCSSPDEMQSVECHLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSCKAVSKRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSCKAVSKRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SC-DKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 456
           SC DKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG
Sbjct: 181 SCADKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLG 240

Query: 457 LAAPVGSPFSPIA 469
           LAAPVGSPFSPIA
Sbjct: 241 LAAPVGSPFSPIA 253

[Close]

BLAST of Lsi03G019800 vs. NCBI nr
Match: XP_008442738.1 (PREDICTED: uncharacterized protein LOC103486526 isoform X2 [Cucumis melo] >TYK25173.1 PWWP domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 416.8 bits (1070), Expect = 2.5e-112
Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 217 MAKKRKTPQKKKGEKQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFCYSSSIARRGTSALP 276
           MAKKRKT  KKKGE QSPLIDNIPKYSQQRRSSPPKRRTDFSSLF YSSSI  +  +AL 
Sbjct: 1   MAKKRKTSPKKKGETQSPLIDNIPKYSQQRRSSPPKRRTDFSSLFFYSSSIPHQDPAALL 60

Query: 277 RLSLNEVGLSKLIVNHSDNTNEELSSSSLVKCSNSLGEDEELSLCSSPDEMQSVECRLSD 336
           RLSLNEVG SKL+VNHSDNTNEELSSSSLVKCSNSL EDE LSLCSSPDEMQSVECRLS+
Sbjct: 61  RLSLNEVGSSKLMVNHSDNTNEELSSSSLVKCSNSLEEDEGLSLCSSPDEMQSVECRLSN 120

Query: 337 SSCKAVSKRKGTSKISYPVGKKLPDSESNSLSETPENVQLWSTESFEERSSNTTVEFQDQ 396
           SSC    KRKGTSKIS+PVGKKLPDSESNSLS TPENVQLWSTESFEERSSNTTVEFQDQ
Sbjct: 121 SSC----KRKGTSKISFPVGKKLPDSESNSLSGTPENVQLWSTESFEERSSNTTVEFQDQ 180

Query: 397 SCDKGSSSNSSRIEDNDVHLDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 456
           SCDKGSSSNSSRIEDND+H DRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL
Sbjct: 181 SCDKGSSSNSSRIEDNDLHQDRGRGKRERKPKVPFDEEMTISLKSTRKFRRMRIMRYLGL 240

Query: 457 AAPVGSPFSPIA 469
           AAPVGSPFSPIA
Sbjct: 241 AAPVGSPFSPIA 248

The following BLAST results are available for this feature:

BLAST of Lsi03G019800 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G019800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAN1	1.4e-121	76.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743960 PE=3 SV=1	[more]
A0A5D3DNG7	1.2e-112	90.48	PWWP domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G...	[more]
A0A1S3B734	1.2e-112	90.48	uncharacterized protein LOC103486526 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1J672	1.3e-111	84.62	uncharacterized protein LOC111481710 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TQ68	3.0e-111	90.12	PWWP domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G...	[more]

BLAST of Lsi03G019800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905235.1	1.6e-122	94.05	uncharacterized protein LOC120091323 isoform X2 [Benincasa hispida]	[more]
XP_038905234.1	3.9e-121	93.68	uncharacterized protein LOC120091323 isoform X1 [Benincasa hispida]	[more]
XP_004137983.1	2.4e-115	91.67	uncharacterized protein LOC101217493 isoform X2 [Cucumis sativus] >KAE8651053.1 ...	[more]
XP_031739028.1	6.0e-114	91.30	uncharacterized protein LOC101217493 isoform X1 [Cucumis sativus]	[more]
XP_008442738.1	2.5e-112	90.48	PREDICTED: uncharacterized protein LOC103486526 isoform X2 [Cucumis melo] >TYK25...	[more]

BLAST of Lsi03G019800 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G019800.1	Lsi03G019800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane