Homology
BLAST of Lsi03G019370 vs. ExPASy Swiss-Prot
Match:
Q0WPF2 (Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN=PCFS4 PE=1 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 7.5e-60
Identity = 275/1020 (26.96%), Postives = 392/1020 (38.43%), Query Frame = 0
Query: 66 DSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATIYAN 125
D GG + PP E+V Y L ELTFNSKPIIT+LTIIAGE + + I+ I
Sbjct: 49 DEFGGGEEVLPPSMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTR 108
Query: 126 ILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGT 185
ILE P EQKLPSLYLLDSIVKNIGRDY +YF++RLPEVFC AYRQ PS+HPSMRHLFGT
Sbjct: 109 ILEAPVEQKLPSLYLLDSIVKNIGRDYGRYFSSRLPEVFCLAYRQAHPSLHPSMRHLFGT 168
Query: 186 WKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER-QRLQ 245
W VFPP L I+ +L SS+ N +S + +PT IHVNPKY+ R +
Sbjct: 169 WSSVFPPPVLRKIDMQLQL-----SSAANQSSVGASEPSQPT-RGIHVNPKYLRRLEPSA 228
Query: 246 QSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDMAQEK 305
++G+ S A + Q + + D L+ L P+ +
Sbjct: 229 AENNLRGINSSA---------RVYGQNSLGGYNDFEDQ----LESPSSLSSTPDGFTRRS 288
Query: 306 NISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKLGYEN 365
N A ++ + G+GR + W NL + +R I +
Sbjct: 289 NDGANPSNQAF------NYGMGRATSRDDEHMEWRRK-ENLGQGNDHERPRALI----DA 348
Query: 366 YPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPAIAGS 425
Y S + P+++ + S V T W+N+EEEEF W +M +P + S
Sbjct: 349 YGVDTSKHVTIN-KPIRDMNGMHSKMV--TPWQNTEEEEFDWEDM--------SPTLDRS 408
Query: 426 TGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSSTWQLQ 485
+ + +P G + D SD ++ +L
Sbjct: 409 RAGEFLRSSVPALGSVRARP----RVGNTSDFHLDSDIKNGVSHQL-------------- 468
Query: 486 ESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRP-QITSSNIGASGHGFL 545
R+N S Y T ++ VD G+ ++ +S++G
Sbjct: 469 -------------RENWSLSQNYPHT-------SNRVDTRAGKDLKVLASSVGLVSSN-- 528
Query: 546 NKGGSGPLGTVGHQRFPSR-SVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSNLD 605
++ G+ P ++ Q SR A P G P
Sbjct: 529 SEFGAPPFDSI--QDVNSRFGRALPDGTWP------------------------------ 588
Query: 606 PRRRHIQDAALGLHPSVR-PDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQS 665
H S R P++L P H
Sbjct: 589 -------------HLSARGPNSLPVPSAH------------------------------- 648
Query: 666 ELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSSM 725
H ++ PG + +RL + L P S +
Sbjct: 649 ----LHHLANPG---------NAMSNRLQGKPLYRPENQ-----------VSQSHLNDMT 708
Query: 726 QQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQT 785
QQN Q + N P SS P P +S H S PP
Sbjct: 709 QQN---QMLVNYLPSSSAMAPRPMQSLLTHV---------SHGYPP------------HG 768
Query: 786 NVEEPSLPSDPLPPSSPMNSASTETSNVVND-ASSPISNLLSSLVAKGLISASKGESTNS 845
+ PSL P++S N S L+ SL+A+GLIS + N
Sbjct: 769 STIRPSLSIQGGEAMHPLSSGVLSQIGASNQPPGGAFSGLIGSLMAQGLISLN-----NQ 797
Query: 846 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 905
Q P
Sbjct: 829 PAGQGP------------------------------------------------------ 797
Query: 906 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTL--RAE 965
+G EF + +++ + S IS L+ ++P QC CGLR KC+E+ H WH R
Sbjct: 889 ----LGLEFDADMLKIRNESAISALYGDLPRQCTTCGLRFKCQEEHSKHMDWHVTKNRMS 797
Query: 966 ANNSNSAPRRWYPSSGDWISGNARLLLDAATSL---DESSMMEEDNEPMVPADEDQFACV 1025
N+ + R+W+ S+ W+SG L +A + ++ ++D + VPADEDQ +C
Sbjct: 949 KNHKQNPSRKWFVSASMWLSGAEALGAEAVPGFLPTEPTTEKKDDEDMAVPADEDQTSCA 797
Query: 1026 ICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDV 1076
+CGE FEDFYS E WM+KGA+Y+ P E + ++ GPIVH C ES+ D+
Sbjct: 1009 LCGEPFEDFYSDETEEWMYKGAVYMNAP---EESTTDMDKSQLGPIVHAKCRPESNGGDM 797
BLAST of Lsi03G019370 vs. ExPASy Swiss-Prot
Match:
O94913 (Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 SV=3)
HSP 1 Score: 105.9 bits (263), Expect = 3.1e-21
Identity = 65/194 (33.51%), Postives = 98/194 (50.52%), Query Frame = 0
Query: 80 QELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATIYANILEVPSEQKLPSLY 139
++ Y+++L +LTFNSKP I LTI+A ENL AK I + I A + PS +KLP +Y
Sbjct: 16 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKAPSSEKLPVMY 75
Query: 140 LLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTWKGVFPPQTLLIIE 199
L+DSIVKN+GR+Y+ F L F + +VD + S+ L TW +FP + L ++
Sbjct: 76 LMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALD 135
Query: 200 KELGFVPSGSSSSGNITSKPDLQAQRPTP-----HSIHVNPKYIERQRLQQSGRVKGMTS 259
+ S +P P SIHVNPK++ + + S G
Sbjct: 136 V-------------RVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPS--TPGTVV 194
Query: 260 DATGVSTTNVSQDV 269
+ +ST + D+
Sbjct: 196 SSPSISTPPIVPDI 194
BLAST of Lsi03G019370 vs. ExPASy Swiss-Prot
Match:
Q9C710 (Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PCFS1 PE=1 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 2.4e-18
Identity = 56/165 (33.94%), Postives = 80/165 (48.48%), Query Frame = 0
Query: 918 HPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEANNSNSAPRRWYPSSGDWI 977
H SVI L+ ++P QC CGLR KC+E+ H WH + + + + + S W+
Sbjct: 241 HESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL 300
Query: 978 SGNARLLLDAATSLD-------------ESSMMEEDNEPMVPADEDQFACVICGELFEDF 1037
+ +A L L AAT + + EE + MVPADEDQ C +C E FE+F
Sbjct: 301 A-SASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEF 360
Query: 1038 YSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTE 1070
+S E +WM+K A+Y+T G IVH C+ E
Sbjct: 361 FSHEDDDWMYKDAVYLT---------------KNGRIVHVKCMPE 389
BLAST of Lsi03G019370 vs. ExPASy Swiss-Prot
Match:
Q9FIX8 (Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana OX=3702 GN=PCFS5 PE=1 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 2.1e-17
Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 0
Query: 918 HPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEANNSNSAPRRWYPSSGDWI 977
H SVI L+ ++P QC CG+R KC+E+ H WH + + + + + S W+
Sbjct: 234 HESVIKSLYSDMPRQCTSCGVRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL 293
Query: 978 SGNARLLLDAAT---SLDESSM----MEEDNEP-------MVPADEDQFACVICGELFED 1037
+ +A L L A T +++ +S M++ NE MVPADEDQ C +C E FE+
Sbjct: 294 A-SASLWLCAPTGGGTVEVASFGGGEMQKKNEKDQVQKQHMVPADEDQKNCALCVEPFEE 353
Query: 1038 FYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTE 1070
F+S E +WM+K A+Y+T G IVH C+ E
Sbjct: 354 FFSHEADDWMYKDAVYLT---------------KNGRIVHVKCMPE 383
BLAST of Lsi03G019370 vs. ExPASy Swiss-Prot
Match:
Q10237 (Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4G9.04c PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 2.5e-15
Identity = 48/102 (47.06%), Postives = 59/102 (57.84%), Query Frame = 0
Query: 86 YRTALAELTFNSKPIITNLTIIAGENLQAAKAISATIYANILEVPSEQKLPSLYLLDSIV 145
Y +AL +LTFNSKPII LT IA EN A +I I +I + P KLP+LYLLDSI
Sbjct: 8 YLSALEDLTFNSKPIIHTLTYIAQENEPYAISIVNAIEKHIQKCPPNCKLPALYLLDSIS 67
Query: 146 KNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTWK 188
KN+G Y +F L F AY V+P + + L TWK
Sbjct: 68 KNLGAPYTYFFGLHLFSTFMSAYTVVEPRLRLKLDQLLATWK 109
BLAST of Lsi03G019370 vs. ExPASy TrEMBL
Match:
A0A5A7TQ23 (Polyadenylation and cleavage factor-like protein 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002570 PE=4 SV=1)
HSP 1 Score: 1946.4 bits (5041), Expect = 0.0e+00
Identity = 1005/1087 (92.46%), Postives = 1037/1087 (95.40%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVMFL 1088
IK M +
Sbjct: 1081 IKMAMIV 1086
BLAST of Lsi03G019370 vs. ExPASy TrEMBL
Match:
A0A1S3B6K6 (polyadenylation and cleavage factor homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486572 PE=4 SV=1)
HSP 1 Score: 1945.6 bits (5039), Expect = 0.0e+00
Identity = 1005/1085 (92.63%), Postives = 1036/1085 (95.48%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1084
BLAST of Lsi03G019370 vs. ExPASy TrEMBL
Match:
A0A1S3B794 (polyadenylation and cleavage factor homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486572 PE=4 SV=1)
HSP 1 Score: 1937.5 bits (5018), Expect = 0.0e+00
Identity = 1003/1085 (92.44%), Postives = 1034/1085 (95.30%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIK DIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIK--DIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1082
BLAST of Lsi03G019370 vs. ExPASy TrEMBL
Match:
A0A0A0LGI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G750380 PE=4 SV=1)
HSP 1 Score: 1927.1 bits (4991), Expect = 0.0e+00
Identity = 995/1085 (91.71%), Postives = 1029/1085 (94.84%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFR SDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRPSDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAI++
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIAS 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVPSGSSSS ITSKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPSGSSSSVAITSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKG+ +DATG TTNVSQDVAQAK+STGRPWADAPIK DIQRPLRDA NDM
Sbjct: 241 QRLQQSGRVKGIATDATG-GTTNVSQDVAQAKMSTGRPWADAPIK--DIQRPLRDAQNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DY+YGSDLSRTS VGRRVVDEGRDKPWSSAGSNL+EKLSGQRNGFN+KL
Sbjct: 301 AQEKNVTAGYSDYDYGSDLSRTSSVGRRVVDEGRDKPWSSAGSNLSEKLSGQRNGFNMKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+MNSMLT HGAP
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMNSMLTSHGAPG 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I S GKDQWTPEDSDNSGIDNK +SVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 ITSSAGKDQWTPEDSDNSGIDNKHVSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESI LDG RGG+PRKNSGQSGGYGATLT+LSG NSSVDQMGGRPQIT S+IGASGH
Sbjct: 481 WQLQESIPLDGLRGGVPRKNSGQSGGYGATLTSLSGTNSSVDQMGGRPQITPSSIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKG SGPLG VGHQRFPSRSVAFPSGQPPLHQR S LLVDHVPHQ+HDHKTTSFSN
Sbjct: 541 GFLNKGSSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSSSQLLVDHVPHQVHDHKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPD+LQKPQPHDLQA ASSIP SQPRHQFSLSESLKPD+TQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDSLQKPQPHDLQALASSIPGSQPRHQFSLSESLKPDITQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ A IPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAAPIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQ ESSVGPPSLESPSTMVKLSQ
Sbjct: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQGESSVGPPSLESPSTMVKLSQ 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPE LKSGDAVTSSVPVPSIP+SS+ HS +LESPSKAAAK STSPPPSATTE
Sbjct: 841 VTSQMPSQPEKLKSGDAVTSSVPVPSIPISSSCHSPTKLESPSKAAAKISTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLF++IPYQCKICGLRLKCEE LD HS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFEDIPYQCKICGLRLKCEEHLDIHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS+ APRRWYPSS DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSGAPRRWYPSSDDWISGNARFLLDAVTSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FED YSQELG+WMFKGAMYITIPSVGSEVGSTNEQVARGPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDSYSQELGDWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTACLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1082
BLAST of Lsi03G019370 vs. ExPASy TrEMBL
Match:
A0A5D3DPM4 (Polyadenylation and cleavage factor-like protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003500 PE=4 SV=1)
HSP 1 Score: 1897.1 bits (4913), Expect = 0.0e+00
Identity = 982/1061 (92.55%), Postives = 1013/1061 (95.48%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIK DIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIK--DIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPI 1062
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPI
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPI 1058
BLAST of Lsi03G019370 vs. NCBI nr
Match:
XP_038906013.1 (polyadenylation and cleavage factor homolog 4 [Benincasa hispida])
HSP 1 Score: 1990.3 bits (5155), Expect = 0.0e+00
Identity = 1026/1085 (94.56%), Postives = 1050/1085 (96.77%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRGGNINGRPFPQRPVVSGNNIV QPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGGNINGRPFPQRPVVSGNNIVPQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
T+YANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TVYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFPPQ L IIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPPQALQIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGMTSD TG +TT SQDVAQAKISTGRPW DAPIKVLDIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMTSDGTG-ATTTASQDVAQAKISTGRPWVDAPIKVLDIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKNI+AGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLA+KLSGQRNGFN+KL
Sbjct: 301 AQEKNITAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLADKLSGQRNGFNVKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENYPAPKSANTGARLLP+QNFSS SSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA
Sbjct: 361 GYENYPAPKSANTGARLLPMQNFSSGSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
IAGSTGKDQWTPEDSDNSGIDNKPLS+RDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSLRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH
Sbjct: 481 WQLQESISLDGLRSGVPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFL+KGGSGPLGTVGHQRFPSRSVAFPSGQP LHQ PPSP LVDH+PHQIHD K TSFSN
Sbjct: 541 GFLSKGGSGPLGTVGHQRFPSRSVAFPSGQPSLHQCPPSPSLVDHIPHQIHDDKPTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RHIQDAALGLH SVRPDNLQKPQPHDLQASASSIPA QPRHQFSLSESLKP+VTQ
Sbjct: 601 LDPRKRHIQDAALGLHSSVRPDNLQKPQPHDLQASASSIPAPQPRHQFSLSESLKPNVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS
Sbjct: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
+QQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQ ESSVGPPSLESPSTMVKLS+
Sbjct: 721 IQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQGESSVGPPSLESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSL S+PLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGE T S
Sbjct: 781 TKVEEPSLLSNPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGELTTS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQM SQPENLKS DAVTSSVP PSIP SSASHSSMRLESPSKAAAKSSTSPPP ATTE
Sbjct: 841 VTSQMLSQPENLKSSDAVTSSVPAPSIPASSASHSSMRLESPSKAAAKSSTSPPPPATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INN IGF+FSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQL+THS WHTLRAEAN
Sbjct: 901 INNFIGFDFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLETHSHWHTLRAEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYPSSGDWISGNARLLLDAATSLDES+MMEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPSSGDWISGNARLLLDAATSLDESNMMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYS+ELGNWMFKGA YIT PSVGSE+GSTNEQVARGPIVHTNCLTESSVYDVGLATD
Sbjct: 1021 FEDFYSRELGNWMFKGATYITSPSVGSEIGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1084
BLAST of Lsi03G019370 vs. NCBI nr
Match:
KAA0043917.1 (polyadenylation and cleavage factor-like protein 4-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1946.4 bits (5041), Expect = 0.0e+00
Identity = 1005/1087 (92.46%), Postives = 1037/1087 (95.40%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVMFL 1088
IK M +
Sbjct: 1081 IKMAMIV 1086
BLAST of Lsi03G019370 vs. NCBI nr
Match:
XP_008442798.1 (PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform X1 [Cucumis melo])
HSP 1 Score: 1945.6 bits (5039), Expect = 0.0e+00
Identity = 1005/1085 (92.63%), Postives = 1036/1085 (95.48%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1084
BLAST of Lsi03G019370 vs. NCBI nr
Match:
XP_008442799.1 (PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform X2 [Cucumis melo])
HSP 1 Score: 1937.5 bits (5018), Expect = 0.0e+00
Identity = 1003/1085 (92.44%), Postives = 1034/1085 (95.30%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFRASDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIST 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVP+GSSSS I SKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPTGSSSSVAINSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKGM +DATG +TNVSQDVAQAKISTGRPWADAPIK DIQRPLRDAPNDM
Sbjct: 241 QRLQQSGRVKGMPTDATG-GSTNVSQDVAQAKISTGRPWADAPIK--DIQRPLRDAPNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DYEYGSDLSRTS VGRRVVDEGRDKPW SAGSNL+EKLSGQRNGFNIKL
Sbjct: 301 AQEKNVTAGYSDYEYGSDLSRTSSVGRRVVDEGRDKPWPSAGSNLSEKLSGQRNGFNIKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+M+SMLTGHGAPA
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMSSMLTGHGAPA 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I STGKDQWTPEDSDNSGIDNK LSVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 INSSTGKDQWTPEDSDNSGIDNKHLSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESISLDG R G+PRKNSGQSGGYGATLTALSG NSSVDQMGGRPQIT SNIGASGH
Sbjct: 481 WQLQESISLDGLRAGVPRKNSGQSGGYGATLTALSGTNSSVDQMGGRPQITPSNIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKGGSGPLG VGHQRFPSRSVAFPSGQPPLHQR PS LLVDHVPHQIHD KTTSFSN
Sbjct: 541 GFLNKGGSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSPSQLLVDHVPHQIHDQKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPDN QKPQ HDL+A ASSIP SQPRHQFSLSESLKPDVTQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDNHQKPQTHDLRALASSIPGSQPRHQFSLSESLKPDVTQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ AVSIPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAVSIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQN+SFQDVGNMKPRSSIKPPLP+RSSPAHTFSEPKIQ ESSVGPPS+ESPSTMVKLS+
Sbjct: 721 MQQNLSFQDVGNMKPRSSIKPPLPNRSSPAHTFSEPKIQGESSVGPPSVESPSTMVKLSR 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETS+VVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSHVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPENLKSGDAVTSSVPVPSI VSS+ HSS +LESP KAAAKSSTSPPPSATTE
Sbjct: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIAVSSSCHSSTKLESPLKAAAKSSTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLFD+IPYQCKICGLRLKCEEQLDTHS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLDTHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS++APRRWYP S DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSTAPRRWYPCSDDWISGNARFLLDAETSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FEDFYSQELGNWM+KGA YITIPSVGSEVG TNEQVA+GPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDFYSQELGNWMYKGATYITIPSVGSEVGGTNEQVAKGPIVHTTCLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1082
BLAST of Lsi03G019370 vs. NCBI nr
Match:
XP_011651991.1 (polyadenylation and cleavage factor homolog 4 isoform X1 [Cucumis sativus])
HSP 1 Score: 1935.2 bits (5012), Expect = 0.0e+00
Identity = 997/1085 (91.89%), Postives = 1031/1085 (95.02%), Query Frame = 0
Query: 1 MEMESSRRPFDRTREPGLKKPRLTDEADRGGNINGRPFPQRPVVSGNNIVQQPRFRASDR 60
MEMESSRRPFDRTREPGLKKPRL DEADRG NINGRPFPQRPVVSGNNIVQQPRFR SDR
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRPSDR 60
Query: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISA 120
DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAI++
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAIAS 120
Query: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR
Sbjct: 121 TIYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMR 180
Query: 181 HLFGTWKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER 240
HLFGTWKGVFP QTL IIEKELGFVPSGSSSS ITSKPDLQAQRPTPHSIHVNPKYIER
Sbjct: 181 HLFGTWKGVFPLQTLQIIEKELGFVPSGSSSSVAITSKPDLQAQRPTPHSIHVNPKYIER 240
Query: 241 QRLQQSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDM 300
QRLQQSGRVKG+ +DATG TTNVSQDVAQAK+STGRPWADAPIKVLDIQRPLRDA NDM
Sbjct: 241 QRLQQSGRVKGIATDATG-GTTNVSQDVAQAKMSTGRPWADAPIKVLDIQRPLRDAQNDM 300
Query: 301 AQEKNISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKL 360
AQEKN++AGY+DY+YGSDLSRTS VGRRVVDEGRDKPWSSAGSNL+EKLSGQRNGFN+KL
Sbjct: 301 AQEKNVTAGYSDYDYGSDLSRTSSVGRRVVDEGRDKPWSSAGSNLSEKLSGQRNGFNMKL 360
Query: 361 GYENYPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPA 420
GYENY APKS NTGARLLPVQNFSSSS+NRVLSTNWKNSEEEEFMWG+MNSMLT HGAP
Sbjct: 361 GYENYSAPKSTNTGARLLPVQNFSSSSNNRVLSTNWKNSEEEEFMWGDMNSMLTSHGAPG 420
Query: 421 IAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSST 480
I S GKDQWTPEDSDNSGIDNK +SVRDTGASVDREASSDSQSSEQRELGD+GQQRSST
Sbjct: 421 ITSSAGKDQWTPEDSDNSGIDNKHVSVRDTGASVDREASSDSQSSEQRELGDSGQQRSST 480
Query: 481 WQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQITSSNIGASGH 540
WQLQESI LDG RGG+PRKNSGQSGGYGATLT+LSG NSSVDQMGGRPQIT S+IGASGH
Sbjct: 481 WQLQESIPLDGLRGGVPRKNSGQSGGYGATLTSLSGTNSSVDQMGGRPQITPSSIGASGH 540
Query: 541 GFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSN 600
GFLNKG SGPLG VGHQRFPSRSVAFPSGQPPLHQR S LLVDHVPHQ+HDHKTTSFSN
Sbjct: 541 GFLNKGSSGPLGNVGHQRFPSRSVAFPSGQPPLHQRSSSQLLVDHVPHQVHDHKTTSFSN 600
Query: 601 LDPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQ 660
LDPR+RH+QDAALGLHPSVRPD+LQKPQPHDLQA ASSIP SQPRHQFSLSESLKPD+TQ
Sbjct: 601 LDPRKRHMQDAALGLHPSVRPDSLQKPQPHDLQALASSIPGSQPRHQFSLSESLKPDITQ 660
Query: 661 SELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSS 720
SELSSQ A IPGTDFGPSSSAGTVPDRLPAEILG PSTSSLLAAVMKSGLFSNHSITS+
Sbjct: 661 SELSSQLAAPIPGTDFGPSSSAGTVPDRLPAEILGNPSTSSLLAAVMKSGLFSNHSITSN 720
Query: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQ 780
MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQ ESSVGPPSLESPSTMVKLSQ
Sbjct: 721 MQQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQGESSVGPPSLESPSTMVKLSQ 780
Query: 781 TNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
T VEEPSLPSDPLPPSSPM+SASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS
Sbjct: 781 TKVEEPSLPSDPLPPSSPMDSASTETSNVVNDASSPISNLLSSLVAKGLISASKGESTNS 840
Query: 841 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 900
VTSQMPSQPE LKSGDAVTSSVPVPSIP+SS+ HS +LESPSKAAAK STSPPPSATTE
Sbjct: 841 VTSQMPSQPEKLKSGDAVTSSVPVPSIPISSSCHSPTKLESPSKAAAKISTSPPPSATTE 900
Query: 901 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTLRAEAN 960
INNLIGFEFSSHVIRKFHPSVISGLF++IPYQCKICGLRLKCEE LD HS+WHTLR EAN
Sbjct: 901 INNLIGFEFSSHVIRKFHPSVISGLFEDIPYQCKICGLRLKCEEHLDIHSRWHTLRTEAN 960
Query: 961 NSNSAPRRWYPSSGDWISGNARLLLDAATSLDESSMMEEDNEPMVPADEDQFACVICGEL 1020
NS+ APRRWYPSS DWISGNAR LLDA TSLDES +MEEDNEPMVPADEDQFACVICGEL
Sbjct: 961 NSSGAPRRWYPSSDDWISGNARFLLDAVTSLDESDLMEEDNEPMVPADEDQFACVICGEL 1020
Query: 1021 FEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGLATD 1080
FED YSQELG+WMFKGAMYITIPSVGSEVGSTNEQVARGPIVHT CLTESSVYDVGLATD
Sbjct: 1021 FEDSYSQELGDWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTACLTESSVYDVGLATD 1080
Query: 1081 IKTVM 1086
IK M
Sbjct: 1081 IKMEM 1084
BLAST of Lsi03G019370 vs. TAIR 10
Match:
AT2G36480.2 (ENTH/VHS family protein )
HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-115
Identity = 349/985 (35.43%), Postives = 489/985 (49.64%), Query Frame = 0
Query: 127 LEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTW 186
++VPS+QKLP+LYLLDSIVKNIGRDYIKYF ARLPEVF KAYRQVDP +H +MRHLFGTW
Sbjct: 1 MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60
Query: 187 KGVFPPQTLLIIEKELGFVPSGSSSSGNI-TSKPDLQAQRPTPHSIHVNPKYIERQRLQQ 246
KGVF PQTL +IEKELGF S+ + T++ + Q+QRP PHSIHVNPKY+ERQRLQQ
Sbjct: 61 KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRP-PHSIHVNPKYLERQRLQQ 120
Query: 247 SGRVKGMTSDA--TGVSTTNVSQDVAQ-AKISTGRPWADAPIKVLDIQRPLRDAPNDMAQ 306
SGR KGM +D T + T S + + + I++G W P KV +I+RP RD ++
Sbjct: 121 SGRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWV-GPAKVNNIRRPQRDLLSEPLY 180
Query: 307 EKNISAGYADYEYGSDLSRTS-----GVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFN 366
EK+I + +Y+Y SDL S VG R+ D+G +K W A + + +S QR+G +
Sbjct: 181 EKDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLH 240
Query: 367 IKLGYENYPAPKSANTGARLLPVQNFSSSSSNRVLST---NWKNSEEEEFMWGEMNSMLT 426
K NY + V+N SS +R + +WKNSEEEEFMW +M+S L+
Sbjct: 241 SKSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLS 300
Query: 427 GHGAPAIAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGA---SVDREASSDSQSSEQRELG 486
I + + P++S+ +N L A D S++S SSEQ++
Sbjct: 301 ETDVATI--NPKNELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPS 360
Query: 487 DAGQQRSSTWQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQIT 546
G S+ + A S+ + G +PQ
Sbjct: 361 SIGHWAFSS----------------------------------TNATSTATRKGIQPQPR 420
Query: 547 SSNIGASGHGFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIH 606
+ G L GSG Q PLH
Sbjct: 421 -----VASSGILPSSGSG-----------------SDRQSPLHD---------------- 480
Query: 607 DHKTTSFSNL---DPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQ--PRH 666
+TS N+ D RR H +L + P AS PA Q PR
Sbjct: 481 ---STSKQNVTKQDVRRAH---------------SLPQRDPR-----ASRFPAKQNVPR- 540
Query: 667 QFSLSESLKPDVTQSELSSQHAVSIPGTDFGPSSSAGTVPD-RLPAEILGEPSTSSLLAA 726
+S++ + S+ + + +P F S+A P L +E G+P+ S LL A
Sbjct: 541 ----DDSVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEA 600
Query: 727 VMKSGLFSNHSITSSMQQNISFQDVGNMKPRSSIKP---PLPSRSSPAHTFSEPKIQAES 786
VMKSG+ SN+S ++++ + + P LP+ S P
Sbjct: 601 VMKSGILSNNSTCGAIKE----------ESHDEVNPGALTLPAASKP------------- 660
Query: 787 SVGPPSLESPSTMVKLSQTNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLS 846
P SL + + + +L VE+ S P +S S +TS + AS P+S LLS
Sbjct: 661 KTLPISLATDNLLARL---KVEQSSAPLVSC-AASLTGITSVQTSKEKSKASDPLSCLLS 720
Query: 847 SLVAKGLISASKGESTNSVTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESP 906
SLV+KGLISASK E ++ + P++ + S VP + P S+ ++ P
Sbjct: 721 SLVSKGLISASKTELPSAPSITQEHSPDHSTNSSMSVSVVPADAQP-------SVLVKGP 780
Query: 907 SKA-AAKSSTSPPPSATTEINNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLK 966
S A K +P ++ +E +LIG +F + IR+ HPSVIS LFD++P+ C C +RLK
Sbjct: 781 STAPKVKGLAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLK 827
Query: 967 CEEQLDTHSQWH-TLRAEANNSNSAPRRWYPSSGDWISGNA-RLLLDAATSLDESSMMEE 1026
+E+LD H + H + E + +NS R W+P +WI+ A L + L E E
Sbjct: 841 QKEELDRHMELHDKKKLELSGTNSKCRVWFPKVDNWIAAKAGELEPEYEEVLSEPESAIE 827
Query: 1027 DNEPMVPADEDQFACVICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARG 1085
D + V ADE Q AC++CGE+FED++SQE+ WMFKGA Y+T P SE A G
Sbjct: 901 DCQ-AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASG 827
BLAST of Lsi03G019370 vs. TAIR 10
Match:
AT2G36480.1 (ENTH/VHS family protein )
HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-115
Identity = 349/983 (35.50%), Postives = 488/983 (49.64%), Query Frame = 0
Query: 127 LEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTW 186
++VPS+QKLP+LYLLDSIVKNIGRDYIKYF ARLPEVF KAYRQVDP +H +MRHLFGTW
Sbjct: 1 MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60
Query: 187 KGVFPPQTLLIIEKELGFVPSGSSSSGNI-TSKPDLQAQRPTPHSIHVNPKYIERQRLQQ 246
KGVF PQTL +IEKELGF S+ + T++ + Q+QRP PHSIHVNPKY+ERQRLQQ
Sbjct: 61 KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRP-PHSIHVNPKYLERQRLQQ 120
Query: 247 SGRVKGMTSDA--TGVSTTNVSQDVAQ-AKISTGRPWADAPIKVLDIQRPLRDAPNDMAQ 306
SGR KGM +D T + T S + + + I++G W P KV +I+RP RD ++
Sbjct: 121 SGRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWV-GPAKVNNIRRPQRDLLSEPLY 180
Query: 307 EKNISAGYADYEYGSDLSRTS-----GVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFN 366
EK+I + +Y+Y SDL S VG R+ D+G +K W A + + +S QR+G +
Sbjct: 181 EKDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLH 240
Query: 367 IKLGYENYPAPKSANTGARLLPVQNFSSSSSNRVLST---NWKNSEEEEFMWGEMNSMLT 426
K NY + V+N SS +R + +WKNSEEEEFMW +M+S L+
Sbjct: 241 SKSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLS 300
Query: 427 GHGAPAIAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGA---SVDREASSDSQSSEQRELG 486
I + + P++S+ +N L A D S++S SSEQ++
Sbjct: 301 ETDVATI--NPKNELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPS 360
Query: 487 DAGQQRSSTWQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQIT 546
G S+ + A S+ + G +PQ
Sbjct: 361 SIGHWAFSS----------------------------------TNATSTATRKGIQPQPR 420
Query: 547 SSNIGASGHGFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIH 606
+ G L GSG Q PLH
Sbjct: 421 -----VASSGILPSSGSG-----------------SDRQSPLHD---------------- 480
Query: 607 DHKTTSFSNL---DPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQ--PRH 666
+TS N+ D RR H +L + P AS PA Q PR
Sbjct: 481 ---STSKQNVTKQDVRRAH---------------SLPQRDPR-----ASRFPAKQNVPR- 540
Query: 667 QFSLSESLKPDVTQSELSSQHAVSIPGTDFGPSSSAGTVPD-RLPAEILGEPSTSSLLAA 726
+S++ + S+ + + +P F S+A P L +E G+P+ S LL A
Sbjct: 541 ----DDSVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEA 600
Query: 727 VMKSGLFSNHSITSSMQQNISFQDVGNMKPRSSIKP---PLPSRSSPAHTFSEPKIQAES 786
VMKSG+ SN+S ++++ + + P LP+ S P
Sbjct: 601 VMKSGILSNNSTCGAIKE----------ESHDEVNPGALTLPAASKP------------- 660
Query: 787 SVGPPSLESPSTMVKLSQTNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLS 846
P SL + + + +L VE+ S P +S S +TS + AS P+S LLS
Sbjct: 661 KTLPISLATDNLLARL---KVEQSSAPLVSC-AASLTGITSVQTSKEKSKASDPLSCLLS 720
Query: 847 SLVAKGLISASKGESTNSVTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESP 906
SLV+KGLISASK E ++ + P++ + S VP + P S+ ++ P
Sbjct: 721 SLVSKGLISASKTELPSAPSITQEHSPDHSTNSSMSVSVVPADAQP-------SVLVKGP 780
Query: 907 SKA-AAKSSTSPPPSATTEINNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLK 966
S A K +P ++ +E +LIG +F + IR+ HPSVIS LFD++P+ C C +RLK
Sbjct: 781 STAPKVKGLAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLK 825
Query: 967 CEEQLDTHSQWH-TLRAEANNSNSAPRRWYPSSGDWISGNA-RLLLDAATSLDESSMMEE 1026
+E+LD H + H + E + +NS R W+P +WI+ A L + L E E
Sbjct: 841 QKEELDRHMELHDKKKLELSGTNSKCRVWFPKVDNWIAAKAGELEPEYEEVLSEPESAIE 825
Query: 1027 DNEPMVPADEDQFACVICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARG 1083
D + V ADE Q AC++CGE+FED++SQE+ WMFKGA Y+T P SE A G
Sbjct: 901 DCQ-AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASG 825
BLAST of Lsi03G019370 vs. TAIR 10
Match:
AT2G36480.3 (ENTH/VHS family protein )
HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-115
Identity = 349/983 (35.50%), Postives = 488/983 (49.64%), Query Frame = 0
Query: 127 LEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTW 186
++VPS+QKLP+LYLLDSIVKNIGRDYIKYF ARLPEVF KAYRQVDP +H +MRHLFGTW
Sbjct: 1 MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60
Query: 187 KGVFPPQTLLIIEKELGFVPSGSSSSGNI-TSKPDLQAQRPTPHSIHVNPKYIERQRLQQ 246
KGVF PQTL +IEKELGF S+ + T++ + Q+QRP PHSIHVNPKY+ERQRLQQ
Sbjct: 61 KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRP-PHSIHVNPKYLERQRLQQ 120
Query: 247 SGRVKGMTSDA--TGVSTTNVSQDVAQ-AKISTGRPWADAPIKVLDIQRPLRDAPNDMAQ 306
SGR KGM +D T + T S + + + I++G W P KV +I+RP RD ++
Sbjct: 121 SGRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWV-GPAKVNNIRRPQRDLLSEPLY 180
Query: 307 EKNISAGYADYEYGSDLSRTS-----GVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFN 366
EK+I + +Y+Y SDL S VG R+ D+G +K W A + + +S QR+G +
Sbjct: 181 EKDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLH 240
Query: 367 IKLGYENYPAPKSANTGARLLPVQNFSSSSSNRVLST---NWKNSEEEEFMWGEMNSMLT 426
K NY + V+N SS +R + +WKNSEEEEFMW +M+S L+
Sbjct: 241 SKSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLS 300
Query: 427 GHGAPAIAGSTGKDQWTPEDSDNSGIDNKPLSVRDTGA---SVDREASSDSQSSEQRELG 486
I + + P++S+ +N L A D S++S SSEQ++
Sbjct: 301 ETDVATI--NPKNELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPS 360
Query: 487 DAGQQRSSTWQLQESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRPQIT 546
G S+ + A S+ + G +PQ
Sbjct: 361 SIGHWAFSS----------------------------------TNATSTATRKGIQPQPR 420
Query: 547 SSNIGASGHGFLNKGGSGPLGTVGHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIH 606
+ G L GSG Q PLH
Sbjct: 421 -----VASSGILPSSGSG-----------------SDRQSPLHD---------------- 480
Query: 607 DHKTTSFSNL---DPRRRHIQDAALGLHPSVRPDNLQKPQPHDLQASASSIPASQ--PRH 666
+TS N+ D RR H +L + P AS PA Q PR
Sbjct: 481 ---STSKQNVTKQDVRRAH---------------SLPQRDPR-----ASRFPAKQNVPR- 540
Query: 667 QFSLSESLKPDVTQSELSSQHAVSIPGTDFGPSSSAGTVPD-RLPAEILGEPSTSSLLAA 726
+S++ + S+ + + +P F S+A P L +E G+P+ S LL A
Sbjct: 541 ----DDSVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEA 600
Query: 727 VMKSGLFSNHSITSSMQQNISFQDVGNMKPRSSIKP---PLPSRSSPAHTFSEPKIQAES 786
VMKSG+ SN+S ++++ + + P LP+ S P
Sbjct: 601 VMKSGILSNNSTCGAIKE----------ESHDEVNPGALTLPAASKP------------- 660
Query: 787 SVGPPSLESPSTMVKLSQTNVEEPSLPSDPLPPSSPMNSASTETSNVVNDASSPISNLLS 846
P SL + + + +L VE+ S P +S S +TS + AS P+S LLS
Sbjct: 661 KTLPISLATDNLLARL---KVEQSSAPLVSC-AASLTGITSVQTSKEKSKASDPLSCLLS 720
Query: 847 SLVAKGLISASKGESTNSVTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESP 906
SLV+KGLISASK E ++ + P++ + S VP + P S+ ++ P
Sbjct: 721 SLVSKGLISASKTELPSAPSITQEHSPDHSTNSSMSVSVVPADAQP-------SVLVKGP 780
Query: 907 SKA-AAKSSTSPPPSATTEINNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLK 966
S A K +P ++ +E +LIG +F + IR+ HPSVIS LFD++P+ C C +RLK
Sbjct: 781 STAPKVKGLAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLK 825
Query: 967 CEEQLDTHSQWH-TLRAEANNSNSAPRRWYPSSGDWISGNA-RLLLDAATSLDESSMMEE 1026
+E+LD H + H + E + +NS R W+P +WI+ A L + L E E
Sbjct: 841 QKEELDRHMELHDKKKLELSGTNSKCRVWFPKVDNWIAAKAGELEPEYEEVLSEPESAIE 825
Query: 1027 DNEPMVPADEDQFACVICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARG 1083
D + V ADE Q AC++CGE+FED++SQE+ WMFKGA Y+T P SE A G
Sbjct: 901 DCQ-AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASG 825
BLAST of Lsi03G019370 vs. TAIR 10
Match:
AT4G04885.1 (PCF11P-similar protein 4 )
HSP 1 Score: 234.2 bits (596), Expect = 5.3e-61
Identity = 275/1020 (26.96%), Postives = 392/1020 (38.43%), Query Frame = 0
Query: 66 DSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATIYAN 125
D GG + PP E+V Y L ELTFNSKPIIT+LTIIAGE + + I+ I
Sbjct: 49 DEFGGGEEVLPPSMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTR 108
Query: 126 ILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGT 185
ILE P EQKLPSLYLLDSIVKNIGRDY +YF++RLPEVFC AYRQ PS+HPSMRHLFGT
Sbjct: 109 ILEAPVEQKLPSLYLLDSIVKNIGRDYGRYFSSRLPEVFCLAYRQAHPSLHPSMRHLFGT 168
Query: 186 WKGVFPPQTLLIIEKELGFVPSGSSSSGNITSKPDLQAQRPTPHSIHVNPKYIER-QRLQ 245
W VFPP L I+ +L SS+ N +S + +PT IHVNPKY+ R +
Sbjct: 169 WSSVFPPPVLRKIDMQLQL-----SSAANQSSVGASEPSQPT-RGIHVNPKYLRRLEPSA 228
Query: 246 QSGRVKGMTSDATGVSTTNVSQDVAQAKISTGRPWADAPIKVLDIQRPLRDAPNDMAQEK 305
++G+ S A + Q + + D L+ L P+ +
Sbjct: 229 AENNLRGINSSA---------RVYGQNSLGGYNDFEDQ----LESPSSLSSTPDGFTRRS 288
Query: 306 NISAGYADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGSNLAEKLSGQRNGFNIKLGYEN 365
N A ++ + G+GR + W NL + +R I +
Sbjct: 289 NDGANPSNQAF------NYGMGRATSRDDEHMEWRRK-ENLGQGNDHERPRALI----DA 348
Query: 366 YPAPKSANTGARLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPAIAGS 425
Y S + P+++ + S V T W+N+EEEEF W +M +P + S
Sbjct: 349 YGVDTSKHVTIN-KPIRDMNGMHSKMV--TPWQNTEEEEFDWEDM--------SPTLDRS 408
Query: 426 TGKDQWTPEDSDNSGIDNKPLSVRDTGASVDREASSDSQSSEQRELGDAGQQRSSTWQLQ 485
+ + +P G + D SD ++ +L
Sbjct: 409 RAGEFLRSSVPALGSVRARP----RVGNTSDFHLDSDIKNGVSHQL-------------- 468
Query: 486 ESISLDGPRGGIPRKNSGQSGGYGATLTALSGANSSVDQMGGRP-QITSSNIGASGHGFL 545
R+N S Y T ++ VD G+ ++ +S++G
Sbjct: 469 -------------RENWSLSQNYPHT-------SNRVDTRAGKDLKVLASSVGLVSSN-- 528
Query: 546 NKGGSGPLGTVGHQRFPSR-SVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSNLD 605
++ G+ P ++ Q SR A P G P
Sbjct: 529 SEFGAPPFDSI--QDVNSRFGRALPDGTWP------------------------------ 588
Query: 606 PRRRHIQDAALGLHPSVR-PDNLQKPQPHDLQASASSIPASQPRHQFSLSESLKPDVTQS 665
H S R P++L P H
Sbjct: 589 -------------HLSARGPNSLPVPSAH------------------------------- 648
Query: 666 ELSSQHAVSIPGTDFGPSSSAGTVPDRLPAEILGEPSTSSLLAAVMKSGLFSNHSITSSM 725
H ++ PG + +RL + L P S +
Sbjct: 649 ----LHHLANPG---------NAMSNRLQGKPLYRPENQ-----------VSQSHLNDMT 708
Query: 726 QQNISFQDVGNMKPRSSIKPPLPSRSSPAHTFSEPKIQAESSVGPPSLESPSTMVKLSQT 785
QQN Q + N P SS P P +S H S PP
Sbjct: 709 QQN---QMLVNYLPSSSAMAPRPMQSLLTHV---------SHGYPP------------HG 768
Query: 786 NVEEPSLPSDPLPPSSPMNSASTETSNVVND-ASSPISNLLSSLVAKGLISASKGESTNS 845
+ PSL P++S N S L+ SL+A+GLIS + N
Sbjct: 769 STIRPSLSIQGGEAMHPLSSGVLSQIGASNQPPGGAFSGLIGSLMAQGLISLN-----NQ 797
Query: 846 VTSQMPSQPENLKSGDAVTSSVPVPSIPVSSASHSSMRLESPSKAAAKSSTSPPPSATTE 905
Q P
Sbjct: 829 PAGQGP------------------------------------------------------ 797
Query: 906 INNLIGFEFSSHVIRKFHPSVISGLFDEIPYQCKICGLRLKCEEQLDTHSQWHTL--RAE 965
+G EF + +++ + S IS L+ ++P QC CGLR KC+E+ H WH R
Sbjct: 889 ----LGLEFDADMLKIRNESAISALYGDLPRQCTTCGLRFKCQEEHSKHMDWHVTKNRMS 797
Query: 966 ANNSNSAPRRWYPSSGDWISGNARLLLDAATSL---DESSMMEEDNEPMVPADEDQFACV 1025
N+ + R+W+ S+ W+SG L +A + ++ ++D + VPADEDQ +C
Sbjct: 949 KNHKQNPSRKWFVSASMWLSGAEALGAEAVPGFLPTEPTTEKKDDEDMAVPADEDQTSCA 797
Query: 1026 ICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDV 1076
+CGE FEDFYS E WM+KGA+Y+ P E + ++ GPIVH C ES+ D+
Sbjct: 1009 LCGEPFEDFYSDETEEWMYKGAVYMNAP---EESTTDMDKSQLGPIVHAKCRPESNGGDM 797
BLAST of Lsi03G019370 vs. TAIR 10
Match:
AT2G36485.1 (ENTH/VHS family protein )
HSP 1 Score: 125.6 bits (314), Expect = 2.7e-28
Identity = 79/143 (55.24%), Postives = 98/143 (68.53%), Query Frame = 0
Query: 3 MESSRRPFDRTREPG-LKKPRLTDEADRGGNINGRPF-PQRPVVSGNNIVQQP---RFRA 62
ME+ RRPFDR+R+PG +KKPRL++E+ R N N R F QR + + + P RFR
Sbjct: 1 MENPRRPFDRSRDPGPMKKPRLSEESIRPVNSNARQFLSQRTLGTATAVTVPPASSRFRV 60
Query: 63 SDRDSGS---SDSGRGGYQPQPPQ-HQELVSQYRTALAELTFNSKPIITNLTIIAGENLQ 122
S R++ S SD R YQPQP H ELV+QY++ALAELTFNSKPIITNLTIIAGEN+
Sbjct: 61 SGRETESSIVSDPSREAYQPQPVHPHYELVNQYKSALAELTFNSKPIITNLTIIAGENVH 120
Query: 123 AAKAISATIYANILEVPSEQKLP 137
AAKA+ I NILEV ++ P
Sbjct: 121 AAKAVVTAICNNILEVNTQFSCP 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q0WPF2 | 7.5e-60 | 26.96 | Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
O94913 | 3.1e-21 | 33.51 | Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 ... | [more] |
Q9C710 | 2.4e-18 | 33.94 | Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9FIX8 | 2.1e-17 | 33.73 | Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q10237 | 2.5e-15 | 47.06 | Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TQ23 | 0.0e+00 | 92.46 | Polyadenylation and cleavage factor-like protein 4-like isoform X1 OS=Cucumis me... | [more] |
A0A1S3B6K6 | 0.0e+00 | 92.63 | polyadenylation and cleavage factor homolog 4-like isoform X1 OS=Cucumis melo OX... | [more] |
A0A1S3B794 | 0.0e+00 | 92.44 | polyadenylation and cleavage factor homolog 4-like isoform X2 OS=Cucumis melo OX... | [more] |
A0A0A0LGI0 | 0.0e+00 | 91.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G750380 PE=4 SV=1 | [more] |
A0A5D3DPM4 | 0.0e+00 | 92.55 | Polyadenylation and cleavage factor-like protein 4-like isoform X2 OS=Cucumis me... | [more] |
Match Name | E-value | Identity | Description | |
XP_038906013.1 | 0.0e+00 | 94.56 | polyadenylation and cleavage factor homolog 4 [Benincasa hispida] | [more] |
KAA0043917.1 | 0.0e+00 | 92.46 | polyadenylation and cleavage factor-like protein 4-like isoform X1 [Cucumis melo... | [more] |
XP_008442798.1 | 0.0e+00 | 92.63 | PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform X1 [Cucumi... | [more] |
XP_008442799.1 | 0.0e+00 | 92.44 | PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform X2 [Cucumi... | [more] |
XP_011651991.1 | 0.0e+00 | 91.89 | polyadenylation and cleavage factor homolog 4 isoform X1 [Cucumis sativus] | [more] |