Lsi03G019060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G019060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CAAX prenyl protease 2
Location	chr03: 30405618 .. 30410233 (+)
RNA-Seq Expression	Lsi03G019060
Synteny	Lsi03G019060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCATCTCATCCTGGGGTTAATCGAAGAAATCGGAAAACAACGGGAAGGGGACTCGCCGACTCGGAAGCAATTCCGATTCAACTCGGCCTGCACGAGGTAGCGAGTTGTCGGAAGCAAGGCGAATTCGAACCGTGAACTCAACGGAAAGCGATTGAAATTCGTCTTCAGATCCAACTGCGAAGAAAATTTTCATTTAATTCTAGGTTTGCTTGAGAAATCGAACAATGGAGGAGGAAGATTGTTTGATTTCCAAAGCAGTGGCAGTGACGGCCTGCAAGGCCATGGCTCTGTTCTACGTTGCCGTTCTCTATGCTCCTGCTTTGATACTTCGTCTACCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTCCTGTGCGCCTTCATTTCCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTGTAAGCTTCAATTTACTTTTTTCCTGTCATTAATTTCTGAAAGGATGACTATATTGTTTGTATTTGCAACGAGTCTGCTCAGAAATCGTCTCAACATGGAATCACCTCTCCTTCTTTGACTTGAACTGTGTAGTTATTCATTTATTTCTGTTCGAAACAATCTTAAGAGAGAATAAAGAATTACAGGCTGTCTCGTTGACAGGAAATGTTCTGCTATGGTTCACTTGAGACAGAATGGTCAATCAGCATCCTCGATACACTGTTTTAGTAAGAATTAATTTATCATGCGAACTACAGGTTAATTAATCGGAATTTGTTAACGTTACAGGGCTTCTTTGGATTGACTAGAAAAAAAACATTTTTCAAAAAAGTTATTTTTATTTAAATTTATTTTATAAAATTATTTAAAATACACTTTCAAAATATTTCAATAGCTATTTTGAGTGGTTGCTTCAATTTTTTTCTTAATGACTTATTTTCAAAATTAAATACTTGAAAAGTTAATCCAAATATACCTATAACTTATCTTTTTAAAATGAAGTAAATTTTGGATTTGAAAACGAATTGTTCATATTCAATAAGGAATCTGTTGGATCCATTGTATCTAATTGACCTGGGAGCAAGAACTTCATATATACATAAACATAATTACCTTTCATTATTTAAGTGAACCAATTACGGTATAGAACATATGTAATCAATCAATCATGTAATTGGCAAATTAGAGATTTGAAATTATTACTTTTTAATTACCATGCAAAGGAAGATATTATGTAGATATGACTTCTTGTTCCTAATTCTATGGGTTGCAACAGATCCCTGGTATTTAGTGAAGCATTATTAGTCTGATTATAAGTTTGTAGTCTGTAATTTAAATATTTGTTTGTGCTAGCTTTCCATCACAATGCTGACTTTCCCCATCTCATTTTGTTTCATGCTAGATAAGGAAAATGGAGTTTTCACTGTTATTAGCAGCTTATGGCATCCGAGCAGATCATATTGTAAGTATCAGTATTTTCTCCTCCATTAAATAACGCGCCATGGTATTAGCTAAGGTTTTCTTTAACATTTTATTCAATTTTATAATCTTGTAGTCTGCAGATTGGAAAGGTGAAATGAATCCTAAACTTGCGTCCTGAATTGCAATTTTATCTATGAAACAGTGGCAAGCTGTGATCTTTCCTCTTTCATTGACTTCTTTAATGTACGTTGGATCAATGGTCTTAAAGTCTTTGTTATTGGTGGATTCATGGAGAGAACATATGAATCATGAAGAAGGCTTCCTTTTGAACTGTGCCAGACTTTTTTGGACAAGAGTTCTTGATTGGGGGCTATCGACTGTCTCAAATGTTTTAGCTTGGAGAAATTATGTTGTGGTGAGTACCCTAAAGCTGTTCCACTTCATTTATGGGTCCATGTTTCCTGTCTCTTAAGAGCAAAGTAATCACTTATACTTAGCTTTATCGTGGCTCCCTGTGATGACTAACTGCATGCTAGTATATATTCTTGAAATATTTTTGCAGCTGCTTTCCTTTCAAATCCTGAGCAACTCTTCATCTTGAACCATTGGTTTTTTGTCCTGTAGGCGTTACTTATTTGACAATTCTCTATGAGTAAGCTCCACGAGTTGGGTGGAAAGGAAAAAGTTGTGGCTTGGTTTTGCTCTAAATCTCCCTTGCATACGTATTATGTTCAAACTAGATAAGTAACATAGTATTGATTGATGTGGTTACCTGGATCATTGTTTTCACAATTTGGTTGGGAAGGCTTTGACTAATGTCCAATGTTCTAGATGCCACTCGGGAGTAAAAGATGCTGTTATTTTGAGTTTGTGAGTTGACTTATCTATAAAATTCAAATAGATGTCTTGTTTTCCTTGACGCAAAGTAGTGTTGGTCACTTGACGATAACAAATAATTCTTTAAGCTGTGGCAAATGAACCTTTTTTACTTGGATTTCTTGGTTGACATTTGTGATTTGCATCACACATCCTTGGACAGGCTCCACTAACTGAGGAGTTGGTGTTTAGAGCATGCATGATACCAGTTCTTCTATCTGGGGGATTTAAGCCGGCCACTGTGATATTTCTCTGCCCCATTCTTTTCAGTCTGGGTAAGTTCAACGCTTCTTGTTTGGGCAGATAACTACCATACATAAAAGTTTGTGCATGTTAACCTCATTTATTCATTACGGGGCATGACCTTATGCTTCCCTATACTGTTAATTATTTTTCTGAAATTCGTCGTGTTCCCCCTAATTCATAGAAATAGGGGGAAAACATTGCAAGGGTTTGAGCACATTGCAAGGGTTTGAGCTTGAGATTTCTTGTTCTTGTACGGCTTTAAATGACCAGTAGACTTATATATGTCCAGTGTTTTAAAAAGCCCTCTCGGGCGCGTGCCTAGGCACAGGTCTGGCGCCTCGCCTTGGAAAGGCGAGGCTCATAAAATAAGGCGTGCCTCAGGCGCACGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCCTGAGCCTTGGGGCTTTTTCATTATTTTTAAAAAATTGTAATAATTAAGGGTTTTCCTTCTTTATTAACTAAAAGAATCAAGTTTACTAAGCCTAAATGCAAACTTTCTTGTGTTTGGGGTCTCTTTTTCCATATTTCCACTTCAACTATGCTTTCTCTTTTTAATGTAATATTTTGATATATAGTGCGCCTCACAAAAAAAAAGCCTGCGCCTTGGGCTCCAGAGGGCCATTGCGCCTTGGGCATTTAAAAACACTGTATATGTCTATATATGTAGATATGTGCATATGAAGAGCACATATGTATGAAGAGACGACTCTTCAATACTTATATTTGGTTTTAGTTTATTAATTCAAATTAGGATGGGACCATCAAACTTTGAACATTTTATGGATGACCAATTTAAATTTACCCAAACTGGTTAAAAATTAATTATGTTCTGCTTCATCATCACATGACAGCGCATTTAAACCACTTTATGGAGTACTATAGCAAGCAGAACAACAACTTAACCAAAGCTGTTATGGTTGTAGGTAAACAACTTTTATTCCCTGAAAAATTTCATTCCATTTGTTATTCTTCCATTTTCTTCTTCTTCTTTTTTTCTTTAATGTTTATGAAAGGATGCGTATGGGTTCTGTTTTTTTCTCTTATCTTTTCTTTTTCCAGGTCTCCAGCTTGGGTATACTGTGGTATTTGGATCATACGCAAGTTTTCTCTTTATGCGAACTGGTATTTGAGAGAGAACATTACTTTTAATGCTATGTATTTAGATAGGTCATTGTTTTTGGTTCCTGAGCTTCATACACCTGTTCTTTTGCAATCAATTATCAGGTAGAAAGAGTGATTTTAACTGATGAATTTGCACCAGCTTCAAGCTGGAATTGGAGTAGAATTAGTGTTCTAAATGTGCTACTAGAAGCTCATCAAATTTCATTCATGAAGTTGTATATACTATATATATTTTCTCCCCCGTTTGGATTGACTTGAGAAAAAAATGTTTTTCAAAAAACTCATTTTTATTTAAACTCTTTTGATAAAAACTGTTTAAAATACACTTCAAAATTTATTTTGAGTAGTTGCCAAACACTCCAATTTTTTTCCAAAATGACTTATTTTTTAAATTAAACACTTGAAAATGTATTCCAAACACACCATTAGTCTAGGGCAGTATCAACTTTGTTTAATGAGAAGCATGTGTACTGGCATCAATGCCTTTCTTGACAAGCAAATTGATGATAGTTGATATTCTCACCAAACTGATTTAAAGATGCTACTAGGAAGGGTGATGTTTAATTTGACATCTAATATTAGTGATTATTCTTAATAATATTAAGAGTAGGGGGACTATGGGACAATATCTTCTAGTGCTTTCCTTTACAACTCTTGTTCCAAGAGTTTTGTAATGAATATCCTTCCTTGATCACTTCCCATTGGAAAGGTTTATATAGTTCATAGCCTGCATGAAATATATATATACATATTCCCTTTCCCGGAAAGAAAAAAAATGATATCTAAGATAGTTTTATTGGACTTGGTTCACAAACCTAGCCACTAATGCTTTAGCATTTTTAACTATGACAACTGATGGTGGATTTGTTGGAAGTGTTTGGCATGCCTTCTAGTTTAAGCATTTTTTAAAAAGATATTTTCAATAAAATGTTATTATATCCTGC

mRNA sequence

ATGTTCCCATCTCATCCTGGGGTTAATCGAAGAAATCGGAAAACAACGGGAAGGGGACTCGCCGACTCGGAAGCAATTCCGATTCAACTCGGCCTGCACGAGGTTTGCTTGAGAAATCGAACAATGGAGGAGGAAGATTGTTTGATTTCCAAAGCAGTGGCAGTGACGGCCTGCAAGGCCATGGCTCTGTTCTACGTTGCCGTTCTCTATGCTCCTGCTTTGATACTTCGTCTACCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTCCTGTGCGCCTTCATTTCCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTATAAGGAAAATGGAGTTTTCACTGTTATTAGCAGCTTATGGCATCCGAGCAGATCATATTGCTCCACTAACTGAGGAGTTGGTGTTTAGAGCATGCATGATACCAGTTCTTCTATCTGGGGGATTTAAGCCGGCCACTGTGATATTTCTCTGCCCCATTCTTTTCAGTCTGGCGCATTTAAACCACTTTATGGAGTACTATAGCAAGCAGAACAACAACTTAACCAAAGCTGTTATGGTTGTAGGTCTCCAGCTTGGGTATACTGTGGTATTTGGATCATACGCAAGTTTTCTCTTTATGCGAACTGGTATTTGAGAGAGAACATTACTTTTAATGCTATGTATTTAGATAGGTCATTGTTTTTGGTTCCTGAGCTTCATACACCTGTTCTTTTGCAATCAATTATCAGGTAGAAAGAGTGATTTTAACTGATGAATTTGCACCAGCTTCAAGCTGGAATTGGAGTAGAATTAGTGTTCTAAATGTGCTACTAGAAGCTCATCAAATTTCATTCATGAAGTTGTATATACTATATATATTTTCTCCCCCGTTTGGATTGACTTGAGAAAAAAATGTTTTTCAAAAAACTCATTTTTATTTAAACTCTTTTGATAAAAACTGTTTAAAATACACTTCAAAATTTATTTTGAGTAGTTGCCAAACACTCCAATTTTTTTCCAAAATGACTTATTTTTTAAATTAAACACTTGAAAATGTATTCCAAACACACCATTAGTCTAGGGCAGTATCAACTTTGTTTAATGAGAAGCATGTGTACTGGCATCAATGCCTTTCTTGACAAGCAAATTGATGATAGTTGATATTCTCACCAAACTGATTTAAAGATGCTACTAGGAAGGGTGATGTTTAATTTGACATCTAATATTAGTGATTATTCTTAATAATATTAAGAGTAGGGGGACTATGGGACAATATCTTCTAGTGCTTTCCTTTACAACTCTTGTTCCAAGAGTTTTGTAATGAATATCCTTCCTTGATCACTTCCCATTGGAAAGGTTTATATAGTTCATAGCCTGCATGAAATATATATATACATATTCCCTTTCCCGGAAAGAAAAAAAATGATATCTAAGATAGTTTTATTGGACTTGGTTCACAAACCTAGCCACTAATGCTTTAGCATTTTTAACTATGACAACTGATGGTGGATTTGTTGGAAGTGTTTGGCATGCCTTCTAGTTTAAGCATTTTTTAAAAAGATATTTTCAATAAAATGTTATTATATCCTGC

Coding sequence (CDS)

ATGTTCCCATCTCATCCTGGGGTTAATCGAAGAAATCGGAAAACAACGGGAAGGGGACTCGCCGACTCGGAAGCAATTCCGATTCAACTCGGCCTGCACGAGGTTTGCTTGAGAAATCGAACAATGGAGGAGGAAGATTGTTTGATTTCCAAAGCAGTGGCAGTGACGGCCTGCAAGGCCATGGCTCTGTTCTACGTTGCCGTTCTCTATGCTCCTGCTTTGATACTTCGTCTACCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTCCTGTGCGCCTTCATTTCCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTATAAGGAAAATGGAGTTTTCACTGTTATTAGCAGCTTATGGCATCCGAGCAGATCATATTGCTCCACTAACTGAGGAGTTGGTGTTTAGAGCATGCATGATACCAGTTCTTCTATCTGGGGGATTTAAGCCGGCCACTGTGATATTTCTCTGCCCCATTCTTTTCAGTCTGGCGCATTTAAACCACTTTATGGAGTACTATAGCAAGCAGAACAACAACTTAACCAAAGCTGTTATGGTTGTAGGTCTCCAGCTTGGGTATACTGTGGTATTTGGATCATACGCAAGTTTTCTCTTTATGCGAACTGGTATTTGA

Protein sequence

MFPSHPGVNRRNRKTTGRGLADSEAIPIQLGLHEVCLRNRTMEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAVSVVVCALILPIRKMEFSLLLAAYGIRADHIAPLTEELVFRACMIPVLLSGGFKPATVIFLCPILFSLAHLNHFMEYYSKQNNNLTKAVMVVGLQLGYTVVFGSYASFLFMRTGI

Homology

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BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot
Match: Q8GW19 (CAAX prenyl protease 2 OS=Arabidopsis thaliana OX=3702 GN=FACE2 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.8e-42
Identity = 103/235 (43.83%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 49  ISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAVSVVVCAL 108
           IS ++AV  C AMALFYV +LY P +ILRLP   S   +MIRRF+CA I T  S+V  A 
Sbjct: 8   ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTVASLVFTAF 67

Query: 109 ILPIRKMEFSLLLAAYGIRADH-------------------------------------- 168
           ILPI+  E S +L  YGIR DH                                      
Sbjct: 68  ILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLESWKENGGGC 127

Query: 169 -------------------------------IAPLTEELVFRACMIPVLLSGGFKPATVI 215
                                          +AP+TEELVFR+CMIP+LL  GF+  T I
Sbjct: 128 SSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAI 187

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BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot
Match: Q9Y256 (CAAX prenyl protease 2 OS=Homo sapiens OX=9606 GN=RCE1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 126 IRADHIAPLTEELVFRACMIPVLL-SGGFKPATVIFLCPILFSLAHLNHFMEYYSKQNNN 185
           +R   IAPLTEELVFRACM+P+L    G  PA  +F CP+ F +AH +H +E    + ++
Sbjct: 165 LRNQVIAPLTEELVFRACMLPMLAPCMGLGPA--VFTCPLFFGVAHFHHIIEQLRFRQSS 224

Query: 186 LTKAVMVVGLQLGYTVVFGSYASFLFMRTG 215
           +    +    Q  YT VFG+Y +FLF+RTG
Sbjct: 225 VGNIFLSAAFQFSYTAVFGAYTAFLFIRTG 252

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BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot
Match: P57791 (CAAX prenyl protease 2 OS=Mus musculus OX=10090 GN=Rce1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 126 IRADHIAPLTEELVFRACMIPVLL-SGGFKPATVIFLCPILFSLAHLNHFMEYYSKQNNN 185
           +R   IAPLTEELVFRACM+P+L    G  PA  +F CP+ F +AH +H +E    + ++
Sbjct: 165 LRNQVIAPLTEELVFRACMLPMLAPCTGLGPA--VFTCPLFFGVAHFHHIIEQLRFRQSS 224

Query: 186 LTKAVMVVGLQLGYTVVFGSYASFLFMRTG 215
           +    +    Q  YT VFG+Y +FLF+RTG
Sbjct: 225 VGSIFVSAAFQFSYTAVFGAYTAFLFIRTG 252

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BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot
Match: O94448 (Probable CAAX prenyl protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1687.02 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 131 IAPLTEELVFRACMIPVLLSGGFKPATVIFLCPILFSLAHLNHFMEYYSKQNNNLTKAVM 190
           I PL+EEL FR C++P+  + G+    +IF+ P+LF +AH++H  E+     N    A +
Sbjct: 121 IGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAHIHHTYEFLLAYPNAYIAAAL 180

Query: 191 VVGLQLGYTVVFGSYASFLFMRT 214
              +Q  YT VFG Y + LF+ T
Sbjct: 181 QTVVQFSYTTVFGWYTTHLFLST 203

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BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot
Match: Q9U1H8 (CAAX prenyl protease 2 OS=Drosophila melanogaster OX=7227 GN=Sras PE=2 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 0


Query: 54  AVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAVSVVVCALILPI- 113
           +V+     A F+V    +P L+ R+P P  L + +    L   +    S+ V   + PI 
Sbjct: 66  SVSMVMLAAPFFVYFFSSPELLSRVPFPKLLGLRL--EGLWQAVVIPYSLTVLLFLGPIF 125

Query: 114 ---------RKMEFSLLLAAYG----IRADHIAPLTEELVFRACMIPVLLSGGFKPATVI 173
                       +      ++G    +R   IAPL+EE VFRACM+P++L   F P   +
Sbjct: 126 VNMQNESVRSYFDLDYWRGSFGSIIWVRNHVIAPLSEEFVFRACMMPLILQ-SFSPLVAV 185

Query: 174 FLCPILFSLAHLNHFMEYYSKQNNNLTKAVMVVGLQLGYTVVFGSYASFLFMRTG 215
           F+ P+ F +AHL+H  E  S     L+ A+++   Q  YT +FG Y++FLF RTG
Sbjct: 186 FITPLFFGVAHLHHIAERLS-LGVELSTALLIGLFQFIYTTLFGFYSAFLFARTG 236

[Close]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL
Match: A0A1S3B6N0 (CAAX prenyl protease 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486598 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.7e-74
Identity = 162/244 (66.39%), Postives = 169/244 (69.26%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPAL+LRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALLLRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           S+ VCALILPI+KME SLLLAAYG+RADHI                              
Sbjct: 61  SIFVCALILPIKKMELSLLLAAYGVRADHIWQAVFFPLSLTSFMYVGSMVLKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNRGGDSLLNCARMLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL
Match: A0A0A0LAV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776320 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.3e-73
Identity = 162/244 (66.39%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPALILRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SV VCALILPI+KME SLLLAAYG+RA+HI                              
Sbjct: 61  SVFVCALILPIKKMELSLLLAAYGVRANHIWQAVIFPLSLTSFMYVGSMVLKFLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNHGGDSLLNCARLLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL
Match: A0A1S3B6N8 (CAAX prenyl protease 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486598 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.7e-73
Identity = 161/243 (66.26%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPAL+LRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALLLRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           S+ VCALILPI+KME SLLLAAYG+RADHI                              
Sbjct: 61  SIFVCALILPIKKMELSLLLAAYGVRADHIWQAVFFPLSLTSFMYVGSMVLKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 214
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNRGGDSLLNCARMLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL
Match: A0A6J1EF54 (CAAX prenyl protease 2 OS=Cucurbita moschata OX=3662 GN=LOC111433731 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.8e-69
Identity = 158/244 (64.75%), Postives = 161/244 (65.98%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEE C ISKAVAVTAC AMALFYVAVLYAP LILRLPPP SLQVYM RRFLCAFISTAV
Sbjct: 1   MEEESCSISKAVAVTACTAMALFYVAVLYAPTLILRLPPPTSLQVYMTRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SV+VC LILP RKM+FSLLLAAYGIRADHI                              
Sbjct: 61  SVLVCVLILPTRKMDFSLLLAAYGIRADHIWQAVVFPLSLTSLMYLGSMALKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIPVLLS
Sbjct: 121 GEHMYHGEGSLLDSAIFFWTRFLDWVLLTVSNVLAWRNYVVAPLTEELVFRACMIPVLLS 180

[Close]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL
Match: A0A6J1CU25 (CAAX prenyl protease 2 OS=Momordica charantia OX=3673 GN=LOC111014343 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.0e-69
Identity = 154/244 (63.11%), Postives = 162/244 (66.39%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDC ISKAVAVT+C AM LFYVAVLYAP  ILRLPPPPSLQV+MIRRF+CAF+ST V
Sbjct: 1   MEEEDCSISKAVAVTSCTAMTLFYVAVLYAPTSILRLPPPPSLQVFMIRRFICAFVSTVV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SVVVCALILPIRKMEFSLLL AYGIRADHI                              
Sbjct: 61  SVVVCALILPIRKMEFSLLLGAYGIRADHIWQVVVFPLSLTSLMYAGSMILKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIPVLLS
Sbjct: 121 REYMNHGEGSLVDCASFFWRNFLDWGLSTVSNVLAWRNYVVAPLTEELVFRACMIPVLLS 180

[Close]

BLAST of Lsi03G019060 vs. NCBI nr
Match: XP_038905653.1 (CAAX prenyl protease 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 167/244 (68.44%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEE CLISKAVA TAC AMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEGCLISKAVAATACTAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SVVVCALILPIRKMEFSLLLAAYGIRADHI                              
Sbjct: 61  SVVVCALILPIRKMEFSLLLAAYGIRADHIWQAVIFPLSLTSLLYAGSMVLKYLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIPVLLS
Sbjct: 121 REHMNHGEGSLLNCARLFWTRVLDWGLLTVSNVLAWRNYVVAPLTEELVFRACMIPVLLS 180

[Close]

BLAST of Lsi03G019060 vs. NCBI nr
Match: XP_038905654.1 (CAAX prenyl protease 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 167/244 (68.44%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEE CLISKAVA TAC AMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEGCLISKAVAATACTAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SVVVCALILPIRKMEFSLLLAAYGIRADHI                              
Sbjct: 61  SVVVCALILPIRKMEFSLLLAAYGIRADHIWQAVIFPLSLTSLLYAGSMVLKYLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIPVLLS
Sbjct: 121 REHMNHGEGSLLNCARLFWTRVLDWGLLTVSNVLAWRNYVVAPLTEELVFRACMIPVLLS 180

[Close]

BLAST of Lsi03G019060 vs. NCBI nr
Match: XP_008442829.1 (PREDICTED: CAAX prenyl protease 2 isoform X1 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-73
Identity = 162/244 (66.39%), Postives = 169/244 (69.26%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPAL+LRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALLLRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           S+ VCALILPI+KME SLLLAAYG+RADHI                              
Sbjct: 61  SIFVCALILPIKKMELSLLLAAYGVRADHIWQAVFFPLSLTSFMYVGSMVLKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNRGGDSLLNCARMLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. NCBI nr
Match: XP_004149214.1 (CAAX prenyl protease 2 [Cucumis sativus] >KGN59120.1 hypothetical protein Csa_002304 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 9.0e-73
Identity = 162/244 (66.39%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPALILRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           SV VCALILPI+KME SLLLAAYG+RA+HI                              
Sbjct: 61  SVFVCALILPIKKMELSLLLAAYGVRANHIWQAVIFPLSLTSFMYVGSMVLKFLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 215
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNHGGDSLLNCARLLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. NCBI nr
Match: XP_008442830.1 (PREDICTED: CAAX prenyl protease 2 isoform X2 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72
Identity = 161/243 (66.26%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 42  MEEEDCLISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAV 101
           MEEEDCLISKAVAVTAC AMALFYVA+LYAPAL+LRLPPPPSLQVYMIRRFLCAFISTAV
Sbjct: 1   MEEEDCLISKAVAVTACTAMALFYVAILYAPALLLRLPPPPSLQVYMIRRFLCAFISTAV 60

Query: 102 SVVVCALILPIRKMEFSLLLAAYGIRADHI------------------------------ 161
           S+ VCALILPI+KME SLLLAAYG+RADHI                              
Sbjct: 61  SIFVCALILPIKKMELSLLLAAYGVRADHIWQAVFFPLSLTSFMYVGSMVLKSLLLVDSW 120

Query: 162 -----------------------------------------APLTEELVFRACMIPVLLS 214
                                                    APLTEELVFRACMIP+LLS
Sbjct: 121 REHMNRGGDSLLNCARMLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLS 180

[Close]

BLAST of Lsi03G019060 vs. TAIR 10
Match: AT2G36305.1 (farnesylated protein-converting enzyme 2 )

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-43
Identity = 103/235 (43.83%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 49  ISKAVAVTACKAMALFYVAVLYAPALILRLPPPPSLQVYMIRRFLCAFISTAVSVVVCAL 108
           IS ++AV  C AMALFYV +LY P +ILRLP   S   +MIRRF+CA I T  S+V  A 
Sbjct: 8   ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTVASLVFTAF 67

Query: 109 ILPIRKMEFSLLLAAYGIRADH-------------------------------------- 168
           ILPI+  E S +L  YGIR DH                                      
Sbjct: 68  ILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLESWKENGGGC 127

Query: 169 -------------------------------IAPLTEELVFRACMIPVLLSGGFKPATVI 215
                                          +AP+TEELVFR+CMIP+LL  GF+  T I
Sbjct: 128 SSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAI 187

The following BLAST results are available for this feature:

BLAST of Lsi03G019060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW19	3.8e-42	43.83	CAAX prenyl protease 2 OS=Arabidopsis thaliana OX=3702 GN=FACE2 PE=2 SV=2	[more]
Q9Y256	2.6e-14	45.56	CAAX prenyl protease 2 OS=Homo sapiens OX=9606 GN=RCE1 PE=1 SV=1	[more]
P57791	2.6e-14	45.56	CAAX prenyl protease 2 OS=Mus musculus OX=10090 GN=Rce1 PE=2 SV=1	[more]
O94448	3.5e-11	38.55	Probable CAAX prenyl protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q9U1H8	1.7e-10	32.00	CAAX prenyl protease 2 OS=Drosophila melanogaster OX=7227 GN=Sras PE=2 SV=3	[more]

BLAST of Lsi03G019060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6N0	8.7e-74	66.39	CAAX prenyl protease 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486598 PE=3 S...	[more]
A0A0A0LAV7	4.3e-73	66.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776320 PE=3 SV=1	[more]
A0A1S3B6N8	5.7e-73	66.26	CAAX prenyl protease 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486598 PE=3 S...	[more]
A0A6J1EF54	3.8e-69	64.75	CAAX prenyl protease 2 OS=Cucurbita moschata OX=3662 GN=LOC111433731 PE=3 SV=1	[more]
A0A6J1CU25	5.0e-69	63.11	CAAX prenyl protease 2 OS=Momordica charantia OX=3673 GN=LOC111014343 PE=3 SV=1	[more]

BLAST of Lsi03G019060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905653.1	1.1e-73	68.44	CAAX prenyl protease 2 isoform X1 [Benincasa hispida]	[more]
XP_038905654.1	1.1e-73	68.44	CAAX prenyl protease 2 isoform X2 [Benincasa hispida]	[more]
XP_008442829.1	1.8e-73	66.39	PREDICTED: CAAX prenyl protease 2 isoform X1 [Cucumis melo]	[more]
XP_004149214.1	9.0e-73	66.39	CAAX prenyl protease 2 [Cucumis sativus] >KGN59120.1 hypothetical protein Csa_00...	[more]
XP_008442830.1	1.2e-72	66.26	PREDICTED: CAAX prenyl protease 2 isoform X2 [Cucumis melo]	[more]

BLAST of Lsi03G019060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36305.1	2.7e-43	43.83	farnesylated protein-converting enzyme 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003675	Type II CAAX prenyl endopeptidase Rce1-like	PFAM	PF02517	CPBP	coord: 126..214 e-value: 9.2E-8 score: 32.4
IPR039731	CAAX prenyl protease 2, eukaryotes	PANTHER	PTHR13046	PROTEASE U48 CAAX PRENYL PROTEASE RCE1	coord: 131..214 coord: 48..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G019060.1	Lsi03G019060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071586	CAAX-box protein processing
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0004222	metalloendopeptidase activity