Lsi03G017540 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017540
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Calcium load-activated calcium channel like
Location	chr03: 28909006 .. 28915938 (-)
RNA-Seq Expression	Lsi03G017540
Synteny	Lsi03G017540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTGAGAACCATCAGATTGCAGTACAGTATGTTAGCTACTAAGCAACAATTGAAGTTCATGAAATGTATCTTTTTAATATAAGAAACAGAGATATTGAATAGGGAGGGGAAAAAAAACTTCCCTTTTATTTTCTTTTTTTTGATAAAACTAACTTAAAAGCCAAGAATACAAGTCCCCTTGCCTAACCAAGGGGATTGTGCGTCCTTCATTTATGAGGTCCTTTAGAGATAAGGTGCAGTTTTTGTGGAGGGCTACTTGCTTTACAATCCTTTAGAGCATTTGGATTGAGCAAAATAACAGGATCTTTAGGAGATAGAGAGATCTAGTGAGGAGTTTTGATCCCTACTCCTAGTGAGGCTTGAAGTGTCTCTTTGGGCTTCAGCTGTAAAAGAGATTCGTAACTATTTGCTAGGTTTTATTCTTTTGGATTGGAGTCCTTTTCAGTATAGCTAGTCATTGAGGCACCCTTTCTCAGGATGTTTATTTTATTTTATTTTATTTTATTTTTTGTGTGGTCTTCTTTCTCTCATTTTCTTACATGAACGTGGAGTTTCTTATAAAAAAAATGATGCAACTATAAAAGTATGTGCCTAAAGAACTTCAACTAATGGCTTTTACAAGGTATATCAACTAGGGAAAAAGCATAACCTGGAATTCCATCTCTGAACCCTGCCATGAGTGTTGATGCTGTTTTGAAAAAGTTCCAAAATGAAACTCTTAACTCCTTTTTTATCCTTTTGATAAGAACCCTAGTTTTCATTGAGAAAAAGGAAAGCAAGTACAAATGCTTACAAAAAAAAAAAAAAAAAAACGCCCATAAAAGAAGTCCTCAACTACAAGAGAAGACTCCAATCCAAAAGTATAAGACCAAACTAATAAATGAAAATTTTTGGAACTGCATATATTCTTGGGAATATGAATGGAAATTTCAAAGAGGGGGTGTCATTACTGATATCGTTGCTGTTAAAATTAGCTTTACTCTTCTTTTTATAGGAATCAAATTCACCATCAAAAATAGGTAAACATAGGCAAAGGGACAAGAACCCGATCCTCAACCAAGGTTATGGTCATAACAACAAAAAAAGAAGAAGAAGAAGGCAGTCCAATGACCATATCTCATTGAATTTATAGAATTGCATTTAAAAGAACAACACATTGACATTCCAGTATTCATGTTTCACTTTCAATCCCATTCACACACCTGAGACGCACAAGAAACAAGAATACGCTTGACCAAGGAAGCTGTTGCTTTGTCCTTCCGGTCCATAGCACTGCGAAAATTCATGTACAATATACAAAGAAACCAACCACATATGATCAATTAAGCTTCTTAGGATAGTATAACAAAGCATAATTTCATAAAGAGAGAACAACCCACAATTCAAATTGTACCCTAGAACCTCATTCTTGGGGATGTATTTTAGAAATTGATGGGAAAATTGACCACAATAAAAAAAATTAAAAAAATGGAAAAAGACAGGTGATTTACCAAATCAAGCAGCACCCATAAGAAAGAAATCGCAACTAAGCTCGCGATTCGGTGAGAAAGGATTGATAGATGGATGAACAGAGACTATGAATGTGAAATTATCCTTGAGAGACGGAGAAAGATCAAGTTTTCTTATGGATTTCCTTAAGGCGGCAGCGTTCTTCTAAGTTCTGAGACTGATGGCGGGTTCGGCGATTTTACTTTTTTCATGGTTAGAAATCACTTTTTGGGTAACTTTCACTAAACTAACTAATTAGCCAAATTTGTAACACTTATAAATTGGTAATAATTTAGTCAATAATGAAATTTGTTTTTAAATTAGGATTAAGATTTAATGAACTTTTTTCTTTTATTCTAAGTGTTTGGATTAACTTAAACGCATCTTGACTAATTTTATGTGACAGTTCTTAGGATATAGATTGAACTCATAATCTCTTAGTCATTTATTGAGTCTCTTTTTTTATCACTAGGTCTTGGTTTAATGAAATTTCTTAAATATATAAATTGATAAACGAGTGTCAAAGTAGCTTAGTTCAACTATAATTAGCATAATTTTCTTCCTATATAAAAACTAAATCGTTAATTCGGTAAAAGTTTAGTTATCAAAAGTGATTTTTAACTTCTTCTTGTTTTTCATCTACGATTTACCTCACAATTTTTATAAATTAATATATTAAGTTGACTTCCCATTAATTTTAGTTTTTTTTAGTTCCAACCTCAACTCATGAAAAAAAAAAATCTAGTATTATGTACTCTATTTGGTTCTATTATAAATTTGTCTTCATAAATATTTGGTTCTTTTATTTTTAGATAAATACACTTTTAGTTTTGGTTGTTTTCAAATATAAAAAATGAGTCAAACTATTTACAAATATAGAAAAATTTCAAAACTGTGATAGAATTCTATTGTTTGAGCGATAGACATCGATACAACTCTATTGAACTCTATCGCTGATAGAGAGTGAAATTTTTCTATATTTATAAATAATTTGATATCTTTTAATTTATAGTAATTTCTCTTTTTAGGTTTGTAGTCTAATCATAAATTTTTACTAGGTCGCTAAATTTCCAAATTAACATTTTAAACCTTACTCTTAAGAAAATCTACACTATATATAAAATAGGCTTTTAAGGGCTAAAGGAAGGATCTTTACATACCCCTTTTGTTCTTACATTTTTAGTAAATTCATATGTTGCCCATTGTCGAGTAGATGCGACTTTTTGAGTGTAGATGTTCGTTTGAAAGACGGTGATTTTTTTTAACCAAAGCAAACAAGATCTATATTAAACGTCTAAAAAGCTACAGAAAGAGAAAGTTTTGTACATCATGTTTACAATTAGAAACCAACTAATTTTAGAATGCCAAGAAAATGAGACAACAAAAAAACCTCAACGAGCCAACTCATGAGCAATCTCATTCCTTTTTTGATGCACAAAGCGAAAATTGAATAACAAGGAAAGAGGAAGTCAAATGTTTGCAATGAATGTACGAACCTCTAAATAAGGCTCCATTGAAAGATTAATCATATCGATTAACAACTCATAATTAGAGAAAATCGTAATAGCAGCCACCTCAACCTGAACGACAACCATCCGCTCAGAAATCGCTCGAGCCTCAACACAAACCAAAGACAAGCATGACTCACGATATCTATACGAAGTTGCCTTAACCACTGTGGCTCATCAAGCGGAACAACTCCAAACTTTCCCAACAATGTCATCCACGATCAACTTCAATCCCTGACGACAATGAAATGTTTTAGTTCATGTGCCATTTATAAAAGAATTTAATTATTTTTCACCTCATTAAAATTATGTCAACAAAAATAATTAACAAGTTAATTGTTAAATCATATTTTTATTAATCAACTAACGGATATTAAAACTAATTTTTTAAAATAAGGTCAGAGACTAAGACCCAATTTAGTAATTATTTAGAATTTGATTTTTTATTTTTGAAAATTAAGTCTATAAACACTCTTTTCACTTCTAAATTTCTTGCTTGTAATTACTTTTTTGTTTTCAAAATAGGTCAAATTTTAAAAATTAAAAAAAGTAATTTTTAAACAATTGTTTTTTTTTTTTTTTTTGAATTTGGCTAATATTTAAACTTTTTACTTAATAAAGATGCAAATCATAGTAAGAAAATGAGTGGAAATAGGCTTAATTTCCAAAAACCAAAAAAGAAAAACGAAATAGTTACCAAAACCAAATCTTAACGGTTAGTTTTTTTCCAACACAGAAAGTGTATTTCTCTCCTTATTTTTATTTTTCTAATTATCACTTTTTTATACACTTTTGTCATAAAATTTTCAATTTTCATCAAATTGCACCTCGTAAGATTAAACTTGAATTTGGAAAAAGTATTTCAATTTTTACCATTTGGTAAGTCTTTTGTTTAGAAAATAGTAATAAAAAAAAAAGTATTCTCATGTATATTTAATGAATTATAAAACATAAGTTTGGTACGAATCTCGAGAGTGATAAAATTTCACAAGGAAACAATATTAGAGCTAAATTCTTATCCAAATGTAATTGTTTTGGTAAAGATATTTAAGGATTAATGTGTCTATTAATTAATAAACTTATAAGAGTGCAAACCTACCAAAATGAACCTAGCTTAACAGTAATTGACATAACCTTCTTCCTTAGAAGTGAATGGTTCGATCTCCCATTACAACATTTATTAAAATTATTGACTTTACTTTAAAATTATTATTTTGCCCATTTAATCACTTTGAAAAAATGTCATGGATTTAATTTATTTTAGTAAGATTAGTTATCGTTAAGTTAGACCCATATTGGCGTTGGGATTTGAATTCACAACATATAAAATTAAATGTTATTCAACATGTTCGATTAGCATAATTAGTTTCATTATATTCAATTTGATTTAGTAATCAATTTATTAGCTTACTTTGCCCGATCCAATAATTCTGGTTATTCAAAAGGAAAATCAATATTGATTCTCCATTATTTATTCTTGAAAAATGTATATCGATAAGTAGTATAGTATAATATTAGAACAAGATTAATTCATCTAACATAACAATGCAACAAAAAGTAGCAAAAGAAAGTAAATAATTAGATGATAAAGTAGACACTATGAAATGAAGTTGATAAAGTACCAATAATGAAACTTGTCAATTAATTGATCATCAAAGTGAATCTATGGTAATCTGCTTCAAGACTACTTGTAAAATAGCTCTCCACTCCTTTTAGAATAAAAATTATATTTTTTTTTTATTTCTTGTAGATTATTTCTACATTTCTAATAACAAAAATATTTGTGACTCAAAATCATAAGCATGTGACCGTGTTTAGTAATGTGTAACTACGGAGAACTACATTAAATTAGAGCATGTCAACCTAAGCATAACTCAACTCATTAAGACGTATATATTTGACAAGAAGTTCAAACCCCACTTCCCCATGTTATTAAACTAAAAAGAAAAAAAAAACATATTTACTTCTTGCAATCAAAGTTAAAGATGAACGGATAATTGAACCACCTTGAATCTCAAATTGATATAGAGTTTATGACTTCAATCACTAGTTCATATATCATGTATGATTCGTTTTCCAATAAATTTTCAAATGAAAAGTTGAATTCAATAGCTTAATTGTTACATTTCTAGAAGTATAAGAACTAAATAATTATAGAGGAGAAGAGTTGAACTAATAATCTAATTTTATCCCTAAATTATCATAAATGATCACTTCAACCTTGAATATTAGTAGTAATGACATTAAAAACAACATAGAAAAGAACCTGCAGATGCAAATAGAAAACTTCTACAATATGGTAGAACAGTACCAAGTTTTCCTGTCAATTTTCATCCTTTCCCTAACTTCCATAAAACCTCTCCAACAGGTTATAGTATAATGTGGAGGACTGTTACAAGTAAAGGAAGAGACTAATAGATAGGTAGCAATGTAAAATAAATCAACTTTGATACTGGAAGACTCAGTTTGAAAACCCACTCTAGTTCTTCTACTTCTTATCTGCTGTACTAAGTATAGGGTGGGAGATTCAGACCTCTAACCTCTTGGCCCATGATATATATCTTATCAGCTTAGCTATGTCCAAGTTGGTCTATTGTACTCAAGCTCTTAAGCTACTCAAAGTCAGCAATACCATCCACAAAATCAAAAAAAAAAACCATATTTTGATTAAGCCTCCTCAACTAAATCAAGTGCACTTAGAACTGTTTTAGTCATAATAAGCATCACCGTTATCATTTTTTTTGCTAAGTTCAACAACACGTGAGATGAGAAGATTCGAACTTCTAATTTCTTAGTCGAGGACATATGACTTGTCTGACATTAATTCAGAACAGTAACTAACATAGTTGGCACTACATAACACATTGAAACTCTTACACTTCTTATGAAAATAATGAATGATGCAAGATAATGTTCTATGGGTGTTCATGAGGAGGAATTCCATGCTAAATTAAGAAACCTTAAGCCAATCTAGTTTAGGGAATGGCAAAATGTTTGGTAAGATAAGAATCTCAAGCAGAAAAGTAATTGCCATAACATACCAAACAAGCAGTGGAGGCTTGACTTGGAGAAAATGGGAGCCTGGCTCAAAACATTTTGATCAGTAGCCAGCAGAACACACAGCTCAGTCTCACAATCATAACCAATGCAATAGAATCATTGAACGTAATCAAAGTTTTCAAAGATCAAAAGCTTATATTGATCCCAAAAAAGATGGTATTATTTCCAAATCTAATCAAGAATGCAAGTGGATATTAAAACCAGAATGACCCTCTCAAATTTGTGGAACCCATAGCTATACTAAGTCCGATGAACTCACTATAAAATGGACATATAGAACCCTAATAAAAGTAAGCCTAATCAACCCAAACCAAGTTTTTCATCAGTACGAAAAATTCATAATCAAAGTGGGGGGAAAGGGAGTATTAATTTGATCCAAGCCTGACCTAAATCAGTTCGTCTTAGGATCTGGCATCGGGAACAACCCAGCGCCGGCGCCTCTTGGCGGAGAGAATCCCAAGAACTTCTGCAGATTGGTCCTAATGCTAATGGAACAGAGGAAGTACAAGAACGCCATAGCGCAATCGGTAGGATCGTCACCCTGTAACCCTCGGTGACTCATCTTCATCACAAGCCCAAAAGGCTTAAACGGCAATTTGGCAACAACCTTGCCCTCGAAGAGCGAATTGAGCAATCCAAAGACGACGAACAGAACAAGAGCAACAACGGCGCCGGATTTAAACTTGAAGAGCGAGAGGTCACGGCTTGATTCCTTGAGACTGGTCTCGACGCGATCGATCTTCTTGGTCTTGGATTTCTTGACGGTGATTTTGGAGCTGTCGGTCTTCATGGTCTCGAGCTTTTTGGCGGCCTTGTCGATGGAGGATCGAAGGGTTTTGTAAGAGTTGGTGCGGTAGATGAGAATCCATGA

mRNA sequence

ATGAAGGAATCAAATTCACCATCAAAAATAGGTAAACATAGGCAAAGGGACAAGAACCCGATCCTCAACCAAGGCGGCAGCGTTCTTCTAAGTTCTGAGACTGATGGCGGGTTCGGCGATTTTACTTTTTTCATGATTATTTCTACATTTCTAATAACAAAAATATTTGTGACTCAAAATCATAAGCATTTCGTCTTAGGATCTGGCATCGGGAACAACCCAGCGCCGGCGCCTCTTGGCGGAGAGAATCCCAAGAACTTCTGCAGATTGGTCCTAATGCTAATGGAACAGAGGAAGTACAAGAACGCCATAGCGCAATCGGTAGGATCGTCACCCTGTAACCCTCGGCTTAAACGGCAATTTGGCAACAACCTTGCCCTCGAAGAGCGAATTGAGCAATCCAAAGACGACGAACAGAACAAGAGCAACAACGGCGCCGGATTTAAACTTGAAGAGCGAGAGACTGGTCTCGACGCGATCGATCTTCTTGGTCTTGGATTTCTTGACGGTGATTTTGGAGCTGTCGGTCTTCATGGTCTCGAGCTTTTTGGCGGCCTTGTCGATGGAGGATCGAAGGGTTTTGTAAGAGTTGGTGCGGTAGATGAGAATCCATGA

Coding sequence (CDS)

ATGAAGGAATCAAATTCACCATCAAAAATAGGTAAACATAGGCAAAGGGACAAGAACCCGATCCTCAACCAAGGCGGCAGCGTTCTTCTAAGTTCTGAGACTGATGGCGGGTTCGGCGATTTTACTTTTTTCATGATTATTTCTACATTTCTAATAACAAAAATATTTGTGACTCAAAATCATAAGCATTTCGTCTTAGGATCTGGCATCGGGAACAACCCAGCGCCGGCGCCTCTTGGCGGAGAGAATCCCAAGAACTTCTGCAGATTGGTCCTAATGCTAATGGAACAGAGGAAGTACAAGAACGCCATAGCGCAATCGGTAGGATCGTCACCCTGTAACCCTCGGCTTAAACGGCAATTTGGCAACAACCTTGCCCTCGAAGAGCGAATTGAGCAATCCAAAGACGACGAACAGAACAAGAGCAACAACGGCGCCGGATTTAAACTTGAAGAGCGAGAGACTGGTCTCGACGCGATCGATCTTCTTGGTCTTGGATTTCTTGACGGTGATTTTGGAGCTGTCGGTCTTCATGGTCTCGAGCTTTTTGGCGGCCTTGTCGATGGAGGATCGAAGGGTTTTGTAAGAGTTGGTGCGGTAGATGAGAATCCATGA

Protein sequence

MKESNSPSKIGKHRQRDKNPILNQGGSVLLSSETDGGFGDFTFFMIISTFLITKIFVTQNHKHFVLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLLGLGFLDGDFGAVGLHGLELFGGLVDGGSKGFVRVGAVDENP

Homology

[Close]

BLAST of Lsi03G017540 vs. ExPASy TrEMBL
Match: A0A7J6FLQ1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025049 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 70  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEE 129
           +GNNPAPAPLGG NPKNFC+LV +L+EQRKYKNA+ QS                      
Sbjct: 1   MGNNPAPAPLGGANPKNFCKLVRILIEQRKYKNAMEQS---------------------- 60

Query: 130 RIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDLLGLGFLDGDF-GAVGLHGLE 189
              ++KDD++++ N+GAGF+L++R       ETGL+ I+LLG     GD  G+V LHG E
Sbjct: 61  ---EAKDDKEDEGNDGAGFELKKREIAARFLETGLNPINLLGFRLFGGDLVGSVSLHGFE 114

Query: 190 LFGGLVDGGSKGFVRVGAV 201
           L  G V+GGS+G V VG+V
Sbjct: 121 LLRGFVNGGSEGLVGVGSV 114

[Close]

BLAST of Lsi03G017540 vs. ExPASy TrEMBL
Match: A0A7J7FXZ3 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_029431 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 61/141 (43.26%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 61  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP---- 120
           H   +LG GIG + AP APLGGENPKNF +LV  L+E  KYKNAI QSVGSSPC P    
Sbjct: 95  HDQLLLGFGIGKHLAPVAPLGGENPKNFYKLVRTLIEYTKYKNAIEQSVGSSPCKPLWLI 154

Query: 121 ------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER------ETGLDAIDLL 180
                   +  F   L  +   ++ K  ++ ++       L+        E GLD IDLL
Sbjct: 155 VWTILAGTRGSFAMALPSKREFKRPKTTKRTRAMTTLDLNLKRERSRLVLEVGLDVIDLL 214

Query: 181 GLGFLDGDFG--AVGLHGLEL 183
           GLG L+ + G   V  HGLEL
Sbjct: 215 GLGLLEVELGRVRVSFHGLEL 235

[Close]

BLAST of Lsi03G017540 vs. ExPASy TrEMBL
Match: B7FFI2 (Uncharacterized protein (Fragment) OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.6e-14
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 65  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR-------- 124
           V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KYKNA+ QSVGS PCNPR        
Sbjct: 11  VFGSGIGKRPAPAPLGGAKPKNFCKFVLILMEHKKYKNAMEQSVGSLPCNPRWLIFITSP 70

Query: 125 --LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLL 164
             L       L     +      ++ ++       L+  ++ LD++ L+
Sbjct: 71  KGLNGNLATTLPSNSELSSPNTTKRTRATTPPDLNLKRDKSRLDSLRLV 119

[Close]

BLAST of Lsi03G017540 vs. ExPASy TrEMBL
Match: A0A396H3X0 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0252831 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-13
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 65  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR-------- 124
           V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KY+NA+ QSVGS PCNPR        
Sbjct: 11  VFGSGIGKRPAPAPLGGAKPKNFCKFVLILMEHKKYRNAMEQSVGSLPCNPRWLIFITSP 70

Query: 125 --LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLL 164
             L       L     +      ++ ++       L+  ++ LD++ L+
Sbjct: 71  KGLNGNLATTLPSNSELSSPNTTKRTRATTPPDLNLKRDKSRLDSLRLV 119

[Close]

BLAST of Lsi03G017540 vs. ExPASy TrEMBL
Match: A0A2R6S1Y8 (Calcium load-activated calcium channel like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00800 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 80  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERI 139
           G   PKNFC+LV + +E +KY+NA  QSVGSSPC        + + KR+ G+ LALEER 
Sbjct: 12  GARTPKNFCKLVQIRIEPKKYRNANEQSVGSSPCRVAHLLYDSGQSKRKLGDGLALEERF 71

Query: 140 EQSKDDEQNKSNNGAGFKLEERETGLDAID-----------LLGLGFLDGDFGAVGLHGL 193
           E+++DDE+ + ++ AG +LEE +     ++            L LGFL  +     +  L
Sbjct: 72  EEAEDDEEGEGDDVAGLELEEIDVAAGLLEAALSLRRSIFLALALGFLLMEESVFMVSTL 131

[Close]

BLAST of Lsi03G017540 vs. NCBI nr
Match: KAF4370670.1 (hypothetical protein F8388_025049 [Cannabis sativa])

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-22
Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 70  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEE 129
           +GNNPAPAPLGG NPKNFC+LV +L+EQRKYKNA+ QS                      
Sbjct: 1   MGNNPAPAPLGGANPKNFCKLVRILIEQRKYKNAMEQS---------------------- 60

Query: 130 RIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDLLGLGFLDGDF-GAVGLHGLE 189
              ++KDD++++ N+GAGF+L++R       ETGL+ I+LLG     GD  G+V LHG E
Sbjct: 61  ---EAKDDKEDEGNDGAGFELKKREIAARFLETGLNPINLLGFRLFGGDLVGSVSLHGFE 114

Query: 190 LFGGLVDGGSKGFVRVGAV 201
           L  G V+GGS+G V VG+V
Sbjct: 121 LLRGFVNGGSEGLVGVGSV 114

[Close]

BLAST of Lsi03G017540 vs. NCBI nr
Match: KAF5933260.1 (hypothetical protein HYC85_029431 [Camellia sinensis])

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15
Identity = 61/141 (43.26%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 61  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP---- 120
           H   +LG GIG + AP APLGGENPKNF +LV  L+E  KYKNAI QSVGSSPC P    
Sbjct: 95  HDQLLLGFGIGKHLAPVAPLGGENPKNFYKLVRTLIEYTKYKNAIEQSVGSSPCKPLWLI 154

Query: 121 ------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER------ETGLDAIDLL 180
                   +  F   L  +   ++ K  ++ ++       L+        E GLD IDLL
Sbjct: 155 VWTILAGTRGSFAMALPSKREFKRPKTTKRTRAMTTLDLNLKRERSRLVLEVGLDVIDLL 214

Query: 181 GLGFLDGDFG--AVGLHGLEL 183
           GLG L+ + G   V  HGLEL
Sbjct: 215 GLGLLEVELGRVRVSFHGLEL 235

[Close]

BLAST of Lsi03G017540 vs. NCBI nr
Match: ACJ83384.1 (unknown, partial [Medicago truncatula])

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-13
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 65  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR-------- 124
           V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KYKNA+ QSVGS PCNPR        
Sbjct: 11  VFGSGIGKRPAPAPLGGAKPKNFCKFVLILMEHKKYKNAMEQSVGSLPCNPRWLIFITSP 70

Query: 125 --LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLL 164
             L       L     +      ++ ++       L+  ++ LD++ L+
Sbjct: 71  KGLNGNLATTLPSNSELSSPNTTKRTRATTPPDLNLKRDKSRLDSLRLV 119

[Close]

BLAST of Lsi03G017540 vs. NCBI nr
Match: RHN47423.1 (hypothetical protein MtrunA17_Chr7g0252831 [Medicago truncatula])

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-13
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 65  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR-------- 124
           V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KY+NA+ QSVGS PCNPR        
Sbjct: 11  VFGSGIGKRPAPAPLGGAKPKNFCKFVLILMEHKKYRNAMEQSVGSLPCNPRWLIFITSP 70

Query: 125 --LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLL 164
             L       L     +      ++ ++       L+  ++ LD++ L+
Sbjct: 71  KGLNGNLATTLPSNSELSSPNTTKRTRATTPPDLNLKRDKSRLDSLRLV 119

[Close]

BLAST of Lsi03G017540 vs. NCBI nr
Match: PSS36290.1 (Calcium load-activated calcium channel like [Actinidia chinensis var. chinensis])

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-11
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 80  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERI 139
           G   PKNFC+LV + +E +KY+NA  QSVGSSPC        + + KR+ G+ LALEER 
Sbjct: 12  GARTPKNFCKLVQIRIEPKKYRNANEQSVGSSPCRVAHLLYDSGQSKRKLGDGLALEERF 71

Query: 140 EQSKDDEQNKSNNGAGFKLEERETGLDAID-----------LLGLGFLDGDFGAVGLHGL 193
           E+++DDE+ + ++ AG +LEE +     ++            L LGFL  +     +  L
Sbjct: 72  EEAEDDEEGEGDDVAGLELEEIDVAAGLLEAALSLRRSIFLALALGFLLMEESVFMVSTL 131

The following BLAST results are available for this feature:

BLAST of Lsi03G017540 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G017540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6FLQ1	1.5e-22	48.20	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025049 PE=4 SV=1	[more]
A0A7J7FXZ3	1.0e-15	43.26	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_029431 PE=4 SV=1	[more]
B7FFI2	9.6e-14	41.28	Uncharacterized protein (Fragment) OS=Medicago truncatula OX=3880 PE=2 SV=1	[more]
A0A396H3X0	2.1e-13	40.37	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0252831 ...	[more]
A0A2R6S1Y8	1.2e-11	37.88	Calcium load-activated calcium channel like OS=Actinidia chinensis var. chinensi...	[more]

BLAST of Lsi03G017540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4370670.1	3.1e-22	48.20	hypothetical protein F8388_025049 [Cannabis sativa]	[more]
KAF5933260.1	2.1e-15	43.26	hypothetical protein HYC85_029431 [Camellia sinensis]	[more]
ACJ83384.1	2.0e-13	41.28	unknown, partial [Medicago truncatula]	[more]
RHN47423.1	4.4e-13	40.37	hypothetical protein MtrunA17_Chr7g0252831 [Medicago truncatula]	[more]
PSS36290.1	2.4e-11	37.88	Calcium load-activated calcium channel like [Actinidia chinensis var. chinensis]	[more]

BLAST of Lsi03G017540 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017540.1	Lsi03G017540.1	mRNA