Lsi03G017500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	3-methyladenine DNA glycosidase
Location	chr03: 28892830 .. 28896394 (+)
RNA-Seq Expression	Lsi03G017500
Synteny	Lsi03G017500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCTCAATTTTAAGAAGTACGACGTATTTCATTTTTTCTCCCCCCAATTCCACGTCATCCATCGGCCGGAACCCACAAACAAGCCGTTGACAGTTCGAGAAAGTAAACAGCCGCGCGAAAGGTCAGAGTTTTGGCGAATGCTTCCAGTCCTGACCAGCTCTCTCTTCATTCCTCAATCCCCATTTCAGATTTTCGCTTTCTCCCTCTCCTACGGAATGATCAGAACTCGCCGATTCAAGAAACTCCCCAAACCCAAAACCCCCATTTTTTCAACCGAGCTCCGCAGTGAACCTCAGACGAGGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACTAAACCAAATCGCTCAATTCTCACCCTCTTCCTTTTCCGAGGGATTCACCGTCCTCCCCCAAGACTTCTTCCTCGTTGACGCTTTAGACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGGTACTCATTGCTCGTTCTTTCTTGTATTTGTAACATCTGGGCGCATTGATTTTGATTCTAATAAGCTTATTGTGAATGGGAATCTGTTTGTTTGCATGCCAAGTCAATGAGGGAAATGCTCACAATCTGTTTGTTTGTTTGTCTGTTTGAATACCAAGTCACTGAAGTCTATTTCTCTATAATTTTGCAATTGCGAGTTGGATTTTTTATGGTGATATTGTGATGATATCTTGGATTTGTGAAAAAGTAGTTACTGGCTTATTGAGACTCTTGGGGTTTTGACAAAATATTAAAAGTGCAATTGTCCCCCATTGAAAAAGTTCAAGGAAGTGATGGATTCTAAGCACCATAGAAGGAGCCTATGTCTTTGGTTTCAAATCGTTCTAGTTAAAAACACTTTAAATTTGTTTGGGTGTGCTAACTCTTGTTAAATTCCCTTTTTTATTCTCTAGTTTGAAAGTGAGATTAAAGGGCGTGAGTCGTATAAAAACTTTGAGAGAGTACTCTTGCAATTGGGATCGGAGAGAGAATTATTTTATCTGGTTGTAACAATTTTTCACATAGTGGATTTCTTTTTTGTGAGTAGTGATTTTTCTTGGAGTTTGGAGTTTTCTATGTAAATTCGTGCGTTTCCTAGTTTTATTGTTTTCTTTTTTATTTTTCTATTATTTTTGTACTTATTACTGCGATAGAAGTGGAAGGTTTTTTCCAGCAACTTGACCATTAAACAAAAGTTTTTATAGGTAGAAGCTTATAGGCCAAATGATTCTGCTTGTCATGGTCGGTTTGGTGTCACAGCAAGAACGGCTCCAGTAGTAAGTACTCTTTCTAACTCAATCGATTGCTGATGGAAAAAAAAGAATGAGAGATTTCTAATTCTTGTAGATGCTTTTTCTTTCACCCACATATTATTAAAAAAAAAAAAAAAAAAACTTGCAAAGAGCGTAGTTTCTAACTTTTAAACAAAACAAAAAAAAAAAGTTCTTGTAGATGCTTTGATAACCAAGTTGTATGGACTTGTAGTTTGGACCCGGCGGGCATGCATATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTCGCAGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGTAAACTTTCTTGCCTTGCTTGTAAATTGTACCTTAATTCTTCTGAGCTAACTTTGACACAGTTTTTTAAAGCCTAGATTTGTATAAAGTGTGTTTGGATTGTATCAAAGAATAGGCTATACAAACCTGAGCTTGTGTAATTTATCTTTTTTCTTTAGTTTGTGGGTTTATCATTTGTAAAAGTTGTACAAAAGTGAGTTTAATAAGTGATTTCCTATCACATGGGCTTATGTAATCTGTGAGATTAGAGAACCGGTAGCTTGGAATAAACTAACCCACCTATCAAATAGAGGTCAGTTTCTTAATTCAAGCTAACACAAACTAACCCATGAGCCAACCACCTCTAGATGTTTTCCCTTGTGGTCTGGAAGCCATTGTTTAGTTAGCACTCAAGTGTAACTGTTTTCTTTTGTTGGCTAGAAAAGTTGAGTTTTGTAACCATTTATGCTTCTTGGAGTTGGCTGTAAATGAGGATCGTTTAGAATAAATGTATTGTTAGTTCGTGTGTCGTAGTGTGAGAATATTTGAGTTGACAAGGCTGCTTGATAATCATTTAGCTTTTCGAAATTGTGTTTGTTTTCTTACAAATTCTTTACAATAGTTTTCATCGAGGAAAATTTTGAATTCATAGCCAAACTAAACACAAATTTTTAGAGCTACATTCTTTTTTATAGTTTTCAAAAGGCTTGGTTTTTGAAAACATCCCTAAAAAGTTGATAACAAAACAAAGGAATCATGGGTGGAAGTAGTATTTATAAGCTTAATTTTAAAAAACTAAAACTAAAAACCAAATCGTTATCGAACATTGCCTAAGATCTTCACTAGGATAGATTTTTTAGTTTTATAATTGCAGGTCCAATAATTGTACTTGGCAAATTGGAAACCTTAACGTCGTCTATTTCATATGTTAATGCATAGTGTTCAGAGGCCTAGAAGCACATAGCATTCTTGATGCTTAGTTACCAAATAATCTTACTCAAATGACAAACTTGTTTTTATGGTTTGGCCATTTCTTTATGTCTGTGAATGCATTGATCTTGATTGAGATTCAATTGGAAGGTCATATTCGTTGCAACTCTCTGAATGAAGAAACTCCTCACTGTAGGCTTTCATATTTAAGTTGTTAGATTAATGTAGATGATAAACAGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTATTCTTCTTACTGGGCCTGGGAAGGTAACGAAATGATCTCTATTATAAACCTTGCTTCTAGGAGGCCGACTCTGTAGAATTCATATAAGATTTTGTTTGTTTCTCTTCTTTCTGGTAGTGAAATATTGTAAAAGAAGAAACTATCAGAGTTGAAAATGTTTAAGATGGCTTTGTAAATTTCAAGTTATTTTGCACCTGAAATCACTATTTACCAAATTTATGTCTTACTTCTTTCAAAGGTTGGCCAAGCGCTTGGATTATCAACAGAGTGGTCTAACCACCCGTTTTACGCTCCCGGTAACCGTCGTTATACTACTTCTACCTGTAAGCCTACTGAAGAACTCTGGTCGTGATTCATGTATGAATGTGTTTCAGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATACTGGTAGGTCCTCGTGTTGGTATCGAGTATGCCTTACCAGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGATGGGAGGAGATGGAGCAATTTGTTGTGCTTGGAATTATTTTGTATCACTGAAATTGGATTTGGGAAGGTTTTGTAAATGTTGTATATTTAGTTCACTGTAAACAGAACAACCTCATCTTTTGATTGGTTTCATCTTCAGTTTGAATCTCCAACTTGAGTTCGTTTTAGG

mRNA sequence

AAAAAAACCTCAATTTTAAGAAGTACGACGTATTTCATTTTTTCTCCCCCCAATTCCACGTCATCCATCGGCCGGAACCCACAAACAAGCCGTTGACAGTTCGAGAAAGTAAACAGCCGCGCGAAAGGTCAGAGTTTTGGCGAATGCTTCCAGTCCTGACCAGCTCTCTCTTCATTCCTCAATCCCCATTTCAGATTTTCGCTTTCTCCCTCTCCTACGGAATGATCAGAACTCGCCGATTCAAGAAACTCCCCAAACCCAAAACCCCCATTTTTTCAACCGAGCTCCGCAGTGAACCTCAGACGAGGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACTAAACCAAATCGCTCAATTCTCACCCTCTTCCTTTTCCGAGGGATTCACCGTCCTCCCCCAAGACTTCTTCCTCGTTGACGCTTTAGACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGTTTGGACCCGGCGGGCATGCATATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTCGCAGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTATTCTTCTTACTGGGCCTGGGAAGGTTGGCCAAGCGCTTGGATTATCAACAGAGTGGTCTAACCACCCGTTTTACGCTCCCGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATACTGGTAGGTCCTCGTGTTGGTATCGAGTATGCCTTACCAGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGATGGGAGGAGATGGAGCAATTTGTTGTGCTTGGAATTATTTTGTATCACTGAAATTGGATTTGGGAAGGTTTTGTAAATGTTGTATATTTAGTTCACTGTAAACAGAACAACCTCATCTTTTGATTGGTTTCATCTTCAGTTTGAATCTCCAACTTGAGTTCGTTTTAGG

Coding sequence (CDS)

ATGCTTCCAGTCCTGACCAGCTCTCTCTTCATTCCTCAATCCCCATTTCAGATTTTCGCTTTCTCCCTCTCCTACGGAATGATCAGAACTCGCCGATTCAAGAAACTCCCCAAACCCAAAACCCCCATTTTTTCAACCGAGCTCCGCAGTGAACCTCAGACGAGGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACTAAACCAAATCGCTCAATTCTCACCCTCTTCCTTTTCCGAGGGATTCACCGTCCTCCCCCAAGACTTCTTCCTCGTTGACGCTTTAGACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGTTTGGACCCGGCGGGCATGCATATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTCGCAGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTATTCTTCTTACTGGGCCTGGGAAGGTTGGCCAAGCGCTTGGATTATCAACAGAGTGGTCTAACCACCCGTTTTACGCTCCCGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATACTGGTAGGTCCTCGTGTTGGTATCGAGTATGCCTTACCAGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGA

Protein sequence

MLPVLTSSLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGHLPKSKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITEFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS

Homology

[Close]

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot
Match: Q39147 (DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana OX=3702 GN=MAG PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-76
Identity = 139/196 (70.92%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 91  VLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE------------------------FG 150
           ++P +FF +DALDLAPRLLGK +RRD+VVLRITE                        FG
Sbjct: 58  LMPPEFFQIDALDLAPRLLGKFMRRDNVVLRITEVEAYRPNDSACHGRFGVTPRTAPVFG 117

Query: 151 PGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILLTG 210
           PGGHAYVYLCYGLHMMLN+VAD+ GVGAAVLIRSC+PVSG+ETIQ+RRG  TDKP+LL G
Sbjct: 118 PGGHAYVYLCYGLHMMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLLNG 177

Query: 211 PGKVGQALGLSTEWSNHPFYAPGGLELLDAPEP-ENILVGPRVGIEYALPEHVNALWRFA 262
           PGKVGQALGLSTEWS+HP Y+PGGLELLD  E  E ++VGPRVGI+YALPEHVNALWRFA
Sbjct: 178 PGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWRFA 237

[Close]

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot
Match: Q3JEY0 (Putative 3-methyladenine DNA glycosylase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_0079 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-43
Identity = 97/197 (49.24%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 91  VLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE-------------------------F 150
           +LP  F+  DAL++A  LLG  L R+ VVLRITE                         +
Sbjct: 4   LLPPRFYARDALEVAADLLGASLCREQVVLRITEVEAYRWPEDTANHGRHGQTLRNEPLW 63

Query: 151 GPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQ-KRRGQITDKPILL 210
           GP G  Y+YLCYG+H +LN+V  E G  AAVLIR+C PV+GL+ IQ +RRG+I  KP LL
Sbjct: 64  GPPGRVYLYLCYGIHHLLNLVTGEEGQAAAVLIRACEPVAGLDLIQRRRRGKI--KPGLL 123

Query: 211 TGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRF 262
           TGPGKVG ALGL   W++HP Y PGGLE+        +L GPRVGI YA PEH +A WR 
Sbjct: 124 TGPGKVGAALGLDLSWNHHPLYEPGGLEVRRGTPVAALLAGPRVGIAYAHPEHRDAPWRL 183

[Close]

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot
Match: Q8KBD5 (Putative 3-methyladenine DNA glycosylase OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=CT1853 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 0


Query: 92  LPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE--------------------------- 151
           L  DF+ +  + LA RLLGK+    +V  R+T+                           
Sbjct: 4   LGADFYQMPTILLAERLLGKIFVHHEVSGRVTKGRIVETEAYLGDGDEACHAWRGMTERN 63

Query: 152 ---FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKP 211
              FGP GH Y+Y  YG H + N+V+++ G+  AVL+R+  P+ G+E +Q+RRG  TD+ 
Sbjct: 64  HVMFGPPGHLYIYFSYGCHYLANIVSEQKGIAGAVLLRAMEPIEGIEWMQERRG-TTDER 123

Query: 212 ILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPE--PENILVGPRVGIEYALPEHVN 254
            L++GPGK+ QALGL                L +AP+  PE I   PR+GI        +
Sbjct: 124 ALMSGPGKLTQALGLGPAHYGESLLG-DICWLEEAPDIPPELIGTSPRIGIS----RSTD 183

[Close]

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot
Match: Q2Y9K4 (Putative 3-methyladenine DNA glycosylase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=Nmul_A1264 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-22
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 125 FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILL 184
           FGP  HAY+Y  YG+H  LN V    G GA VLIR+  P+ GL+ ++KRRG ++D+ +L 
Sbjct: 62  FGPPCHAYIYRSYGIHWCLNFVCRPAGHGAGVLIRAIEPLVGLDIMRKRRG-LSDERLLC 121

Query: 185 TGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRF 244
           +GPG+V +ALG++ E+S      P   +L    +P  ++ GPR+GI  A     +  WRF
Sbjct: 122 SGPGRVCEALGITQEYSGMSIDTP-PFQLTPPLDPVPVVTGPRIGISKA----KDVPWRF 181

Query: 245 AIAGTPWISAP 256
            +AG+P++S P
Sbjct: 182 GLAGSPFLSRP 186

[Close]

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot
Match: A4QAA8 (Putative 3-methyladenine DNA glycosylase OS=Corynebacterium glutamicum (strain R) OX=340322 GN=cgR_0192 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-20
Identity = 67/182 (36.81%), Postives = 85/182 (46.70%), Query Frame = 0


Query: 97  FLVDALDLAPRLLGKLLRRDDVVLRITE-------------------------FGPGGHA 156
           FL  A  +AP+LLG  L    V +RITE                         FGPGGH 
Sbjct: 26  FLQPAEIVAPQLLGCTLTHGGVGIRITEVEAYLDSTDEAAHTYRGKTPRNAAMFGPGGHM 85

Query: 157 YVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILLTGPGKVG 216
           YVY+ YG+H   N+V    G G  VL+R+   VSG    Q RRG+      L  GPG  G
Sbjct: 86  YVYISYGIHRAGNIVCGPEGTGQGVLLRAGEVVSGESIAQNRRGERIPHARLAQGPGNFG 145

Query: 217 QALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRFAIAGTPW 254
           QALGL    ++   + P  L + D  E   I+ GPR+GI     ++  AL RF I   P 
Sbjct: 146 QALGLEVSDNHASVFGPSFL-ISDGVETPEIVRGPRIGIS----KNTEALLRFWIPNDPT 202

[Close]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL
Match: A0A5A7TLM4 (3-methyladenine DNA glycosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00770 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 227/280 (81.07%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 8   SLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTR-KKKKKTGHLPK 67
           S+FI QSPF IFA S SYGMIRT RFKKL  PK PI ST+LRSEPQ R KKKKKTGH PK
Sbjct: 3   SVFISQSPFHIFASSFSYGMIRTHRFKKLANPKNPISSTDLRSEPQARKKKKKKTGHCPK 62

Query: 68  SKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE-- 127
           SKPATDP  QIAQ SPSS S+GFT+LP++FFLVDALDLAPRLLGKL+RRDDVVLRITE  
Sbjct: 63  SKPATDPPTQIAQLSPSSSSDGFTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVE 122

Query: 128 ----------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCA 187
                                 FGPGGHAYVYLCYGLHMMLN+VADEVGVGAAVLIR+CA
Sbjct: 123 AYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNIVADEVGVGAAVLIRACA 182

Query: 188 PVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENI 247
           PVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNHPFY PGGLELLDAP+PE+I
Sbjct: 183 PVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESI 242

Query: 248 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 243 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 282

[Close]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL
Match: A0A1S3B6L3 (3-methyladenine DNA glycosidase OS=Cucumis melo OX=3656 GN=LOC103486748 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 227/280 (81.07%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 8   SLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTR-KKKKKTGHLPK 67
           S+FI QSPF IFA S SYGMIRT RFKKL  PK PI ST+LRSEPQ R KKKKKTGH PK
Sbjct: 3   SVFISQSPFHIFASSFSYGMIRTHRFKKLANPKNPISSTDLRSEPQARKKKKKKTGHCPK 62

Query: 68  SKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE-- 127
           SKPATDP  QIAQ SPSS S+GFT+LP++FFLVDALDLAPRLLGKL+RRDDVVLRITE  
Sbjct: 63  SKPATDPPTQIAQLSPSSSSDGFTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVE 122

Query: 128 ----------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCA 187
                                 FGPGGHAYVYLCYGLHMMLN+VADEVGVGAAVLIR+CA
Sbjct: 123 AYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNIVADEVGVGAAVLIRACA 182

Query: 188 PVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENI 247
           PVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNHPFY PGGLELLDAP+PE+I
Sbjct: 183 PVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESI 242

Query: 248 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 243 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 282

[Close]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL
Match: A0A6J1J112 (3-methyladenine DNA glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111481712 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.9e-121
Identity = 228/286 (79.72%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 8   SLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGH---- 67
           S+ IPQSPFQIFAFS SY MI+T RFKK+  PKTPI STELR EPQTR KK+K+GH    
Sbjct: 11  SVLIPQSPFQIFAFSFSYEMIKTHRFKKVADPKTPISSTELRREPQTR-KKRKSGHRTKS 70

Query: 68  ---LPKSKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVL 127
                KSKP TDP  QIAQ SPSS SEGFT+LP++FFLVDALDLAPRLLGKLLRRDDVVL
Sbjct: 71  VTIRAKSKPVTDPQTQIAQSSPSSSSEGFTILPKEFFLVDALDLAPRLLGKLLRRDDVVL 130

Query: 128 RITE------------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAV 187
           RITE                        FGPGGHAYVYLCYGLHMMLNVVADEVG+GAAV
Sbjct: 131 RITEVEAYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNVVADEVGIGAAV 190

Query: 188 LIRSCAPVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA 247
           L+RSCAPVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA
Sbjct: 191 LVRSCAPVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA 250

Query: 248 PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 251 PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 295

[Close]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL
Match: A0A0A0LED6 (3-methyladenine DNA glycosidase OS=Cucumis sativus OX=3659 GN=Csa_3G800670 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.8e-120
Identity = 221/278 (79.50%), Postives = 235/278 (84.53%), Query Frame = 0


Query: 9   LFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGHLPKSK 68
           LFIPQSPF IFA S SYGMIRT RFKKL  PK PI ST+LRSEPQ RKKKKKT + PKSK
Sbjct: 4   LFIPQSPFHIFASSFSYGMIRTHRFKKLANPKNPISSTDLRSEPQARKKKKKTRYCPKSK 63

Query: 69  PATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE---- 128
           PATDP  QIAQ S SS S+GFT+LP++FFLVDALDLAPRLLGKL+RRDDVVLRITE    
Sbjct: 64  PATDPPTQIAQLSSSSSSDGFTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVEAY 123

Query: 129 --------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPV 188
                               FGPGGHAY+YLCYGLHMMLNVVADEVG+GAAVL+R+CAPV
Sbjct: 124 RPNDSACHGRFGVTARTAPVFGPGGHAYIYLCYGLHMMLNVVADEVGLGAAVLVRACAPV 183

Query: 189 SGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILV 248
           SGLETIQKRRG ITDKP+LLTGPGKVGQALGLSTEWSNHPFY PGGLELLDAP+PE+ILV
Sbjct: 184 SGLETIQKRRGLITDKPVLLTGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESILV 243

Query: 249 GPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           GPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLR S
Sbjct: 244 GPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRAS 281

[Close]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL
Match: A0A6J1DAY6 (3-methyladenine DNA glycosidase OS=Momordica charantia OX=3673 GN=LOC111019322 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.0e-100
Identity = 199/272 (73.16%), Postives = 210/272 (77.21%), Query Frame = 0


Query: 27  MIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGH-------LPKSKPATDPLNQ--- 86
           MIRTRRFKK+  P+ PI   +   EP+TR++KKKTGH        PKS P  DP +Q   
Sbjct: 1   MIRTRRFKKIADPQNPISQID---EPRTRRRKKKTGHRAKSVLIRPKSNPEADPQSQSLP 60

Query: 87  ---IAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE--------- 146
               A  S SS +E FT+L +DFFLVDALDLAPRLLGKLLRRDDVVLRITE         
Sbjct: 61  SPHTALVSDSSSAERFTILSKDFFLVDALDLAPRLLGKLLRRDDVVLRITEVEAYRPNDS 120

Query: 147 ---------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLET 206
                          FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLET
Sbjct: 121 ACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLET 180

Query: 207 IQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVG 262
           IQKRR QITDKP+LLTGPGKVGQALGLSTEWSNH  Y PGGLELLDAPEPENILVGPRVG
Sbjct: 181 IQKRRSQITDKPVLLTGPGKVGQALGLSTEWSNHRLYIPGGLELLDAPEPENILVGPRVG 240

[Close]

BLAST of Lsi03G017500 vs. NCBI nr
Match: XP_038903266.1 (DNA-3-methyladenine glycosylase isoform X2 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 240/262 (91.60%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 1   MLPVLTSSLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKK 60
           MLPV TS  FIPQSPFQIFA S SYGMIRT RFKKL  PKTP  STELR EP+TR KKKK
Sbjct: 1   MLPVRTSFPFIPQSPFQIFASSFSYGMIRTHRFKKLSNPKTPSSSTELRCEPRTR-KKKK 60

Query: 61  TGHLPKSKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVL 120
           TGHLPKSKPATDPL QIAQFSPSS SEGFT+LP++FFL DALDLAPRLLGKLLRRDDVVL
Sbjct: 61  TGHLPKSKPATDPLTQIAQFSPSSSSEGFTILPKEFFLADALDLAPRLLGKLLRRDDVVL 120

Query: 121 RITEFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDK 180
           RITEFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDK
Sbjct: 121 RITEFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDK 180

Query: 181 PILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNA 240
           P+LLTGPGKVGQALGLSTEWSNH FYAPGGLELLDAPEP+NILVGPRVGIEYALPEHVNA
Sbjct: 181 PVLLTGPGKVGQALGLSTEWSNHSFYAPGGLELLDAPEPKNILVGPRVGIEYALPEHVNA 240

Query: 241 LWRFAIAGTPWISAPKNTLRPS 263
           LWRFAIAGTPWISAPKNTLRPS
Sbjct: 241 LWRFAIAGTPWISAPKNTLRPS 261

[Close]

BLAST of Lsi03G017500 vs. NCBI nr
Match: XP_038903265.1 (DNA-3-methyladenine glycosylase isoform X1 [Benincasa hispida])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 240/286 (83.92%), Postives = 246/286 (86.01%), Query Frame = 0


Query: 1   MLPVLTSSLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKK 60
           MLPV TS  FIPQSPFQIFA S SYGMIRT RFKKL  PKTP  STELR EP+TR KKKK
Sbjct: 1   MLPVRTSFPFIPQSPFQIFASSFSYGMIRTHRFKKLSNPKTPSSSTELRCEPRTR-KKKK 60

Query: 61  TGHLPKSKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVL 120
           TGHLPKSKPATDPL QIAQFSPSS SEGFT+LP++FFL DALDLAPRLLGKLLRRDDVVL
Sbjct: 61  TGHLPKSKPATDPLTQIAQFSPSSSSEGFTILPKEFFLADALDLAPRLLGKLLRRDDVVL 120

Query: 121 RITE------------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAV 180
           RITE                        FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAV
Sbjct: 121 RITEVEAYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAV 180

Query: 181 LIRSCAPVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA 240
           LIRSCAPVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNH FYAPGGLELLDA
Sbjct: 181 LIRSCAPVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHSFYAPGGLELLDA 240

Query: 241 PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           PEP+NILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 241 PEPKNILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 285

[Close]

BLAST of Lsi03G017500 vs. NCBI nr
Match: XP_031737514.1 (DNA-3-methyladenine glycosylase isoform X2 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123
Identity = 221/254 (87.01%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 9   LFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGHLPKSK 68
           LFIPQSPF IFA S SYGMIRT RFKKL  PK PI ST+LRSEPQ RKKKKKT + PKSK
Sbjct: 4   LFIPQSPFHIFASSFSYGMIRTHRFKKLANPKNPISSTDLRSEPQARKKKKKTRYCPKSK 63

Query: 69  PATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITEFGPG 128
           PATDP  QIAQ S SS S+GFT+LP++FFLVDALDLAPRLLGKL+RRDDVVLRITEFGPG
Sbjct: 64  PATDPPTQIAQLSSSSSSDGFTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEFGPG 123

Query: 129 GHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILLTGPG 188
           GHAY+YLCYGLHMMLNVVADEVG+GAAVL+R+CAPVSGLETIQKRRG ITDKP+LLTGPG
Sbjct: 124 GHAYIYLCYGLHMMLNVVADEVGLGAAVLVRACAPVSGLETIQKRRGLITDKPVLLTGPG 183

Query: 189 KVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRFAIAG 248
           KVGQALGLSTEWSNHPFY PGGLELLDAP+PE+ILVGPRVGIEYALPEHVNALWRFAIAG
Sbjct: 184 KVGQALGLSTEWSNHPFYTPGGLELLDAPKPESILVGPRVGIEYALPEHVNALWRFAIAG 243

Query: 249 TPWISAPKNTLRPS 263
           TPWISAPKNTLR S
Sbjct: 244 TPWISAPKNTLRAS 257

[Close]

BLAST of Lsi03G017500 vs. NCBI nr
Match: XP_008443030.1 (PREDICTED: DNA-3-methyladenine glycosylase [Cucumis melo] >KAA0043748.1 DNA-3-methyladenine glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122
Identity = 227/280 (81.07%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 8   SLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTR-KKKKKTGHLPK 67
           S+FI QSPF IFA S SYGMIRT RFKKL  PK PI ST+LRSEPQ R KKKKKTGH PK
Sbjct: 3   SVFISQSPFHIFASSFSYGMIRTHRFKKLANPKNPISSTDLRSEPQARKKKKKKTGHCPK 62

Query: 68  SKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE-- 127
           SKPATDP  QIAQ SPSS S+GFT+LP++FFLVDALDLAPRLLGKL+RRDDVVLRITE  
Sbjct: 63  SKPATDPPTQIAQLSPSSSSDGFTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVE 122

Query: 128 ----------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCA 187
                                 FGPGGHAYVYLCYGLHMMLN+VADEVGVGAAVLIR+CA
Sbjct: 123 AYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNIVADEVGVGAAVLIRACA 182

Query: 188 PVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENI 247
           PVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNHPFY PGGLELLDAP+PE+I
Sbjct: 183 PVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESI 242

Query: 248 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 243 LVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 282

[Close]

BLAST of Lsi03G017500 vs. NCBI nr
Match: XP_022983051.1 (DNA-3-methyladenine glycosylase [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120
Identity = 228/286 (79.72%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 8   SLFIPQSPFQIFAFSLSYGMIRTRRFKKLPKPKTPIFSTELRSEPQTRKKKKKTGH---- 67
           S+ IPQSPFQIFAFS SY MI+T RFKK+  PKTPI STELR EPQTR KK+K+GH    
Sbjct: 11  SVLIPQSPFQIFAFSFSYEMIKTHRFKKVADPKTPISSTELRREPQTR-KKRKSGHRTKS 70

Query: 68  ---LPKSKPATDPLNQIAQFSPSSFSEGFTVLPQDFFLVDALDLAPRLLGKLLRRDDVVL 127
                KSKP TDP  QIAQ SPSS SEGFT+LP++FFLVDALDLAPRLLGKLLRRDDVVL
Sbjct: 71  VTIRAKSKPVTDPQTQIAQSSPSSSSEGFTILPKEFFLVDALDLAPRLLGKLLRRDDVVL 130

Query: 128 RITE------------------------FGPGGHAYVYLCYGLHMMLNVVADEVGVGAAV 187
           RITE                        FGPGGHAYVYLCYGLHMMLNVVADEVG+GAAV
Sbjct: 131 RITEVEAYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNVVADEVGIGAAV 190

Query: 188 LIRSCAPVSGLETIQKRRGQITDKPILLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA 247
           L+RSCAPVSGLETIQKRRGQITDKP+LLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA
Sbjct: 191 LVRSCAPVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDA 250

Query: 248 PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 263
           PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS
Sbjct: 251 PEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS 295

[Close]

BLAST of Lsi03G017500 vs. TAIR 10
Match: AT3G12040.1 (DNA-3-methyladenine glycosylase (MAG) )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 139/196 (70.92%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 91  VLPQDFFLVDALDLAPRLLGKLLRRDDVVLRITE------------------------FG 150
           ++P +FF +DALDLAPRLLGK +RRD+VVLRITE                        FG
Sbjct: 58  LMPPEFFQIDALDLAPRLLGKFMRRDNVVLRITEVEAYRPNDSACHGRFGVTPRTAPVFG 117

Query: 151 PGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPILLTG 210
           PGGHAYVYLCYGLHMMLN+VAD+ GVGAAVLIRSC+PVSG+ETIQ+RRG  TDKP+LL G
Sbjct: 118 PGGHAYVYLCYGLHMMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLLNG 177

Query: 211 PGKVGQALGLSTEWSNHPFYAPGGLELLDAPEP-ENILVGPRVGIEYALPEHVNALWRFA 262
           PGKVGQALGLSTEWS+HP Y+PGGLELLD  E  E ++VGPRVGI+YALPEHVNALWRFA
Sbjct: 178 PGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWRFA 237

The following BLAST results are available for this feature:

BLAST of Lsi03G017500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39147	1.7e-76	70.92	DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana OX=3702 GN=MAG PE=2 SV=1	[more]
Q3JEY0	2.5e-43	49.24	Putative 3-methyladenine DNA glycosylase OS=Nitrosococcus oceani (strain ATCC 19...	[more]
Q8KBD5	3.1e-22	35.05	Putative 3-methyladenine DNA glycosylase OS=Chlorobaculum tepidum (strain ATCC 4...	[more]
Q2Y9K4	4.1e-22	41.98	Putative 3-methyladenine DNA glycosylase OS=Nitrosospira multiformis (strain ATC...	[more]
A4QAA8	2.9e-20	36.81	Putative 3-methyladenine DNA glycosylase OS=Corynebacterium glutamicum (strain R...	[more]

BLAST of Lsi03G017500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLM4	1.6e-122	81.07	3-methyladenine DNA glycosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B6L3	1.6e-122	81.07	3-methyladenine DNA glycosidase OS=Cucumis melo OX=3656 GN=LOC103486748 PE=3 SV=...	[more]
A0A6J1J112	8.9e-121	79.72	3-methyladenine DNA glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111481712 PE=3...	[more]
A0A0A0LED6	5.8e-120	79.50	3-methyladenine DNA glycosidase OS=Cucumis sativus OX=3659 GN=Csa_3G800670 PE=3 ...	[more]
A0A6J1DAY6	3.0e-100	73.16	3-methyladenine DNA glycosidase OS=Momordica charantia OX=3673 GN=LOC111019322 P...	[more]

BLAST of Lsi03G017500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903266.1	1.4e-131	91.60	DNA-3-methyladenine glycosylase isoform X2 [Benincasa hispida]	[more]
XP_038903265.1	1.6e-127	83.92	DNA-3-methyladenine glycosylase isoform X1 [Benincasa hispida]	[more]
XP_031737514.1	1.0e-123	87.01	DNA-3-methyladenine glycosylase isoform X2 [Cucumis sativus]	[more]
XP_008443030.1	3.3e-122	81.07	PREDICTED: DNA-3-methyladenine glycosylase [Cucumis melo] >KAA0043748.1 DNA-3-me...	[more]
XP_022983051.1	1.8e-120	79.72	DNA-3-methyladenine glycosylase [Cucurbita maxima]	[more]

BLAST of Lsi03G017500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12040.1	1.2e-77	70.92	DNA-3-methyladenine glycosylase (MAG)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003180	Methylpurine-DNA glycosylase	PFAM	PF02245	Pur_DNA_glyco	coord: 125..250 e-value: 1.1E-32 score: 112.9
IPR003180	Methylpurine-DNA glycosylase	TIGRFAM	TIGR00567	TIGR00567	coord: 125..253 e-value: 2.4E-47 score: 159.0
IPR003180	Methylpurine-DNA glycosylase	PANTHER	PTHR10429	DNA-3-METHYLADENINE GLYCOSYLASE	coord: 125..260 coord: 49..124
IPR003180	Methylpurine-DNA glycosylase	HAMAP	MF_00527	3MGH	coord: 31..253 score: 18.908733
IPR003180	Methylpurine-DNA glycosylase	CDD	cd00540	AAG	coord: 96..253 e-value: 2.21984E-63 score: 195.05
IPR036995	Methylpurine-DNA glycosylase superfamily	GENE3D	3.10.300.10		coord: 121..260 e-value: 2.1E-35 score: 123.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..72
IPR011034	Formyl transferase-like, C-terminal domain superfamily	SUPERFAMILY	50486	FMT C-terminal domain-like	coord: 90..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017500.1	Lsi03G017500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
molecular_function	GO:0008725	DNA-3-methyladenine glycosylase activity
molecular_function	GO:0052822	DNA-3-methylguanine glycosylase activity
molecular_function	GO:0052821	DNA-7-methyladenine glycosylase activity
molecular_function	GO:0043916	DNA-7-methylguanine glycosylase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003905	alkylbase DNA N-glycosylase activity
molecular_function	GO:0003824	catalytic activity