Lsi03G017430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cysteine/Histidine-rich C1 domain family protein, putative
Location	chr03: 28800813 .. 28801583 (-)
RNA-Seq Expression	Lsi03G017430
Synteny	Lsi03G017430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAATACAAGCATTTCAGCCACCCCCATGACTTGAAACTCTACCAAATCCAAGAAGATCAAACCAACCAACAATTCCGCTGCTCCGGCTGCGAATCCCTCTGCCACGGCCTTGTTTACGGTTGCCAGAGCTGCGAGTTCTTCCTCCACAAAGCCTGTGCCACCGCACCCCGCTCGCTCCACCACCCTTCCCACCCTCCTCACCACCTCACCCTCCTCCCTTCTTCGACCTATCCCGATGGCTCCTTCCTTTGCAACGCTTGCGGTGCCACTGGCACCGCCTTCTGCTTCTCCTGCATCCTTTGCGACCTAGACCTTCACGTAGATTGTGCCCTCTTACCCGAACAACTCAACCTCAAATCTCATCGTCATAGCCTCTCTCTAGTCTTTTCTGCTTCCTCTAGTGTATGTAACTTTTGTCGTTGCGCCATCGACTCTCGCTATTGGAGTTACAGTTGCTCCACCTGTAACTTCAACGTTCATACCTATTGTGCCACGGCCCCGAATGCACCCCTGGTTGGAGGCGTGAGAAATGATCGGTACGTGCAGTTTCCGGCGGTTGGAGAGGGGGATTATGACAGCGTTTCTCCTGCAGGGTATGGTGTCATCGATGGTGGTGCGGCAGCGGTGAATCCGCCGGTGGTGGTGGTGGAGGATCCATTTCTGAAGGCGCAGGCTGAGCTATATGAGCTTCAAATGCAGATGCAGATTGTGAATGAGATGGCCAAGATGATGGCATCCGTTAACTTGAGCTCTCTTGCACCATGA

mRNA sequence

ATGGAGGAATACAAGCATTTCAGCCACCCCCATGACTTGAAACTCTACCAAATCCAAGAAGATCAAACCAACCAACAATTCCGCTGCTCCGGCTGCGAATCCCTCTGCCACGGCCTTGTTTACGGTTGCCAGAGCTGCGAGTTCTTCCTCCACAAAGCCTGTGCCACCGCACCCCGCTCGCTCCACCACCCTTCCCACCCTCCTCACCACCTCACCCTCCTCCCTTCTTCGACCTATCCCGATGGCTCCTTCCTTTGCAACGCTTGCGGTGCCACTGGCACCGCCTTCTGCTTCTCCTGCATCCTTTGCGACCTAGACCTTCACGTAGATTGTGCCCTCTTACCCGAACAACTCAACCTCAAATCTCATCGTCATAGCCTCTCTCTAGTCTTTTCTGCTTCCTCTAGTGTATGTAACTTTTGTCGTTGCGCCATCGACTCTCGCTATTGGAGTTACAGTTGCTCCACCTGTAACTTCAACGTTCATACCTATTGTGCCACGGCCCCGAATGCACCCCTGGTTGGAGGCGTGAGAAATGATCGGTACGTGCAGTTTCCGGCGGTTGGAGAGGGGGATTATGACAGCGTTTCTCCTGCAGGGTATGGTGTCATCGATGGTGGTGCGGCAGCGGTGAATCCGCCGGTGGTGGTGGTGGAGGATCCATTTCTGAAGGCGCAGGCTGAGCTATATGAGCTTCAAATGCAGATGCAGATTGTGAATGAGATGGCCAAGATGATGGCATCCGTTAACTTGAGCTCTCTTGCACCATGA

Coding sequence (CDS)

ATGGAGGAATACAAGCATTTCAGCCACCCCCATGACTTGAAACTCTACCAAATCCAAGAAGATCAAACCAACCAACAATTCCGCTGCTCCGGCTGCGAATCCCTCTGCCACGGCCTTGTTTACGGTTGCCAGAGCTGCGAGTTCTTCCTCCACAAAGCCTGTGCCACCGCACCCCGCTCGCTCCACCACCCTTCCCACCCTCCTCACCACCTCACCCTCCTCCCTTCTTCGACCTATCCCGATGGCTCCTTCCTTTGCAACGCTTGCGGTGCCACTGGCACCGCCTTCTGCTTCTCCTGCATCCTTTGCGACCTAGACCTTCACGTAGATTGTGCCCTCTTACCCGAACAACTCAACCTCAAATCTCATCGTCATAGCCTCTCTCTAGTCTTTTCTGCTTCCTCTAGTGTATGTAACTTTTGTCGTTGCGCCATCGACTCTCGCTATTGGAGTTACAGTTGCTCCACCTGTAACTTCAACGTTCATACCTATTGTGCCACGGCCCCGAATGCACCCCTGGTTGGAGGCGTGAGAAATGATCGGTACGTGCAGTTTCCGGCGGTTGGAGAGGGGGATTATGACAGCGTTTCTCCTGCAGGGTATGGTGTCATCGATGGTGGTGCGGCAGCGGTGAATCCGCCGGTGGTGGTGGTGGAGGATCCATTTCTGAAGGCGCAGGCTGAGCTATATGAGCTTCAAATGCAGATGCAGATTGTGAATGAGATGGCCAAGATGATGGCATCCGTTAACTTGAGCTCTCTTGCACCATGA

Protein sequence

MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRSLHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRNDRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIVNEMAKMMASVNLSSLAP

Homology

[Close]

BLAST of Lsi03G017430 vs. ExPASy TrEMBL
Match: A0A5D3DP40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005330 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.6e-120
Identity = 215/257 (83.66%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLC-HGLVYGCQSCEFFLHKACATAPR 60
           M+EYKHFSH HDL+LYQIQEDQTNQQFRCSGCESLC HGLVYGCQSCEFFLH+ACATAPR
Sbjct: 1   MDEYKHFSHLHDLELYQIQEDQTNQQFRCSGCESLCTHGLVYGCQSCEFFLHEACATAPR 60

Query: 61  SLHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLN 120
           SL HPSHP HHLTLLPS TYPDGSFLCNACGATGTAFCFSCI CD+DLHVDC LLP+QL+
Sbjct: 61  SLQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGTAFCFSCIPCDIDLHVDCGLLPQQLD 120

Query: 121 LKSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRN 180
           L+SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RN
Sbjct: 121 LESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGLRN 180

Query: 181 DRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIV 240
           DR+VQFPAVGEGDYDSVSP       GG   VN  V VVEDPFLKAQAEL+ELQMQMQIV
Sbjct: 181 DRHVQFPAVGEGDYDSVSPVDR---YGGVTTVNTRVGVVEDPFLKAQAELHELQMQMQIV 240

Query: 241 NEMAKMMASVNLSSLAP 257
           NEMAKMMASVNLSSLAP
Sbjct: 241 NEMAKMMASVNLSSLAP 254

[Close]

BLAST of Lsi03G017430 vs. ExPASy TrEMBL
Match: A0A1S3B7W5 (uncharacterized protein LOC103486755 OS=Cucumis melo OX=3656 GN=LOC103486755 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.6e-120
Identity = 215/257 (83.66%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLC-HGLVYGCQSCEFFLHKACATAPR 60
           M+EYKHFSH HDL+LYQIQEDQTNQQFRCSGCESLC HGLVYGCQSCEFFLH+ACATAPR
Sbjct: 1   MDEYKHFSHLHDLELYQIQEDQTNQQFRCSGCESLCTHGLVYGCQSCEFFLHEACATAPR 60

Query: 61  SLHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLN 120
           SL HPSHP HHLTLLPS TYPDGSFLCNACGATGTAFCFSCI CD+DLHVDC LLP+QL+
Sbjct: 61  SLQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGTAFCFSCIPCDIDLHVDCGLLPQQLD 120

Query: 121 LKSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRN 180
           L+SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RN
Sbjct: 121 LESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGLRN 180

Query: 181 DRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIV 240
           DR+VQFPAVGEGDYDSVSP       GG   VN  V VVEDPFLKAQAEL+ELQMQMQIV
Sbjct: 181 DRHVQFPAVGEGDYDSVSPVDR---YGGVTTVNTRVGVVEDPFLKAQAELHELQMQMQIV 240

Query: 241 NEMAKMMASVNLSSLAP 257
           NEMAKMMASVNLSSLAP
Sbjct: 241 NEMAKMMASVNLSSLAP 254

[Close]

BLAST of Lsi03G017430 vs. ExPASy TrEMBL
Match: A0A0A0LF12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806240 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.6e-117
Identity = 208/256 (81.25%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRS 60
           M+EYKHFSH HDLKLYQIQEDQTNQQFRCSGC SLCHGLVYGCQSCEFFLH+ACATAPRS
Sbjct: 1   MDEYKHFSHLHDLKLYQIQEDQTNQQFRCSGCYSLCHGLVYGCQSCEFFLHEACATAPRS 60

Query: 61  LHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNL 120
           L HPSHP HHLTLLPS TYPDGSFLCNACGATG++FCFSCI CD+DLHVDC LLP+QL+L
Sbjct: 61  LQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGSSFCFSCIPCDIDLHVDCGLLPQQLDL 120

Query: 121 KSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRND 180
           +SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RND
Sbjct: 121 ESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGMRND 180

Query: 181 RYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIVN 240
           R++QFPAV + DYDSVSP       GGA  VNP   VV DPFL+AQAEL+ELQMQMQIVN
Sbjct: 181 RHLQFPAVDQEDYDSVSPVDR---YGGATTVNPRDGVVVDPFLQAQAELHELQMQMQIVN 240

Query: 241 EMAKMMASVNLSSLAP 257
           EMAKMMASVNLSSLAP
Sbjct: 241 EMAKMMASVNLSSLAP 253

[Close]

BLAST of Lsi03G017430 vs. ExPASy TrEMBL
Match: A0A061EXI4 (Cysteine/Histidine-rich C1 domain family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_024927 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 120/259 (46.33%), Postives = 154/259 (59.46%), Query Frame = 0


Query: 3   EYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRSLH 62
           EYKHF H H+L++YQ+Q    + ++RCSGC+S C G  YGC  C+FFLH+ C  A RSL 
Sbjct: 2   EYKHFGHQHNLRIYQLQPG--DHEYRCSGCDSFCSGSAYGCLGCKFFLHEQCGNAGRSLQ 61

Query: 63  HPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKS 122
           HPSHP HHLTL+P +T+  G+F CNACG TG AF + C LCD+DLHV CA LP+ +  +S
Sbjct: 62  HPSHPFHHLTLVPYTTHLAGTFACNACGDTGNAFSYCCPLCDVDLHVPCAFLPQIIKHES 121

Query: 123 HRHSLSLVFS-----ASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGV 182
           H HSLSL +S      SS  C+ C   +D +YWSY+C  CNF  H  CA          +
Sbjct: 122 HLHSLSLTYSLPFPNVSSRFCDICHKLLDCKYWSYNCFACNFAAHALCAAKE-------M 181

Query: 183 RNDRYVQFPAVGEGDYDSVSPAGYGVID--GGAAAVNPPVVVVEDPFLKAQAELYELQMQ 242
           R +          G     S   +   D   G     P    ++DP L+A  EL  L++Q
Sbjct: 182 RRETCHGEHVSSSGTTAPQSNEIHLKEDAASGTTQDQPEPAEIQDPTLQAMCELERLKLQ 241

Query: 243 MQIVNEMAKMMASVNLSSL 255
           MQ+ NE+AKMMAS NLSSL
Sbjct: 242 MQMTNELAKMMASFNLSSL 251

[Close]

BLAST of Lsi03G017430 vs. ExPASy TrEMBL
Match: A0A5C7IV10 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001508 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 119/260 (45.77%), Postives = 156/260 (60.00%), Query Frame = 0


Query: 3   EYKHFSHPHDLKLYQIQEDQTNQQFRCSGCES-LCHGLVYGCQSCEFFLHKACATAPRSL 62
           EYKHFSHPH+L++YQI E + + +F CSGC+S +  G  +GC  C+FFLH+ CA A R +
Sbjct: 2   EYKHFSHPHNLRVYQIVEKEQDDEFMCSGCDSTISAGSAFGCWQCKFFLHEQCANAKRGM 61

Query: 63  HHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLK 122
            HPSHP HHLTLL S+TY  G+FLCNACG +G++F F C LCD DLHV CA +P  LN +
Sbjct: 62  QHPSHPTHHLTLLSSATYSAGAFLCNACGHSGSSFSFCCPLCDFDLHVHCASMPPILNHQ 121

Query: 123 SHR-HSLSLVF------SASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLV 182
           +H  H L+LV+      ++S + C+ C   +D + WSY+C  CNF+VH  C   P     
Sbjct: 122 AHHLHGLTLVYGFLPDHASSYNSCDVCHKLLDQKLWSYNCYACNFHVHASCVIKPEP--- 181

Query: 183 GGVRNDRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQM 242
                    +F A  E                  +A       +EDP LKA+AEL  LQ+
Sbjct: 182 --------AEFKAREE-----------------ESASGSEKTEIEDPVLKARAELQALQL 233

Query: 243 QMQIVNEMAKMMASVNLSSL 255
           QMQ+  E+AKMMAS N SSL
Sbjct: 242 QMQMSQELAKMMASFNPSSL 233

[Close]

BLAST of Lsi03G017430 vs. NCBI nr
Match: XP_038904463.1 (uncharacterized protein LOC120090827 [Benincasa hispida])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 228/256 (89.06%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRS 60
           MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCES CHGLVYGC+SCEFFLHKACATAPRS
Sbjct: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESFCHGLVYGCRSCEFFLHKACATAPRS 60

Query: 61  LHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNL 120
           L HPSHP HHLTLLPS TYPDGSFLCNACGATGTAFCFSCI CDLDLHVDCALLPEQLNL
Sbjct: 61  LRHPSHPSHHLTLLPSPTYPDGSFLCNACGATGTAFCFSCIPCDLDLHVDCALLPEQLNL 120

Query: 121 KSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRND 180
            SHRHSLSLVFS  S +CN CR A+DSRYWSYSCSTCNF+VHTYCATAP A  VG VRND
Sbjct: 121 NSHRHSLSLVFSPPSIICNLCRRALDSRYWSYSCSTCNFHVHTYCATAPTASPVGSVRND 180

Query: 181 RYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIVN 240
           RY +F AV EGDYDSVSPAGYGV++GG  AVNPPVVVVEDPFLKAQAEL+ELQMQMQIVN
Sbjct: 181 RYAEFVAVREGDYDSVSPAGYGVVNGGVPAVNPPVVVVEDPFLKAQAELHELQMQMQIVN 240

Query: 241 EMAKMMASVNLSSLAP 257
           EMAKMMASVNLSSLAP
Sbjct: 241 EMAKMMASVNLSSLAP 256

[Close]

BLAST of Lsi03G017430 vs. NCBI nr
Match: XP_008443040.1 (PREDICTED: uncharacterized protein LOC103486755 [Cucumis melo] >KAA0043741.1 uncharacterized protein E6C27_scaffold236G00700 [Cucumis melo var. makuwa] >TYK25391.1 uncharacterized protein E5676_scaffold352G005330 [Cucumis melo var. makuwa])

HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-119
Identity = 215/257 (83.66%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLC-HGLVYGCQSCEFFLHKACATAPR 60
           M+EYKHFSH HDL+LYQIQEDQTNQQFRCSGCESLC HGLVYGCQSCEFFLH+ACATAPR
Sbjct: 1   MDEYKHFSHLHDLELYQIQEDQTNQQFRCSGCESLCTHGLVYGCQSCEFFLHEACATAPR 60

Query: 61  SLHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLN 120
           SL HPSHP HHLTLLPS TYPDGSFLCNACGATGTAFCFSCI CD+DLHVDC LLP+QL+
Sbjct: 61  SLQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGTAFCFSCIPCDIDLHVDCGLLPQQLD 120

Query: 121 LKSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRN 180
           L+SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RN
Sbjct: 121 LESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGLRN 180

Query: 181 DRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIV 240
           DR+VQFPAVGEGDYDSVSP       GG   VN  V VVEDPFLKAQAEL+ELQMQMQIV
Sbjct: 181 DRHVQFPAVGEGDYDSVSPVDR---YGGVTTVNTRVGVVEDPFLKAQAELHELQMQMQIV 240

Query: 241 NEMAKMMASVNLSSLAP 257
           NEMAKMMASVNLSSLAP
Sbjct: 241 NEMAKMMASVNLSSLAP 254

[Close]

BLAST of Lsi03G017430 vs. NCBI nr
Match: XP_004136731.1 (uncharacterized protein LOC101202742 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 208/256 (81.25%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRS 60
           M+EYKHFSH HDLKLYQIQEDQTNQQFRCSGC SLCHGLVYGCQSCEFFLH+ACATAPRS
Sbjct: 1   MDEYKHFSHLHDLKLYQIQEDQTNQQFRCSGCYSLCHGLVYGCQSCEFFLHEACATAPRS 60

Query: 61  LHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNL 120
           L HPSHP HHLTLLPS TYPDGSFLCNACGATG++FCFSCI CD+DLHVDC LLP+QL+L
Sbjct: 61  LQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGSSFCFSCIPCDIDLHVDCGLLPQQLDL 120

Query: 121 KSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRND 180
           +SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RND
Sbjct: 121 ESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGMRND 180

Query: 181 RYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIVN 240
           R++QFPAV + DYDSVSP       GGA  VNP   VV DPFL+AQAEL+ELQMQMQIVN
Sbjct: 181 RHLQFPAVDQEDYDSVSPVDR---YGGATTVNPRDGVVVDPFLQAQAELHELQMQMQIVN 240

Query: 241 EMAKMMASVNLSSLAP 257
           EMAKMMASVNLSSLAP
Sbjct: 241 EMAKMMASVNLSSLAP 253

[Close]

BLAST of Lsi03G017430 vs. NCBI nr
Match: KGN59437.2 (hypothetical protein Csa_002578 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 208/256 (81.25%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MEEYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRS 60
           M+EYKHFSH HDLKLYQIQEDQTNQQFRCSGC SLCHGLVYGCQSCEFFLH+ACATAPRS
Sbjct: 37  MDEYKHFSHLHDLKLYQIQEDQTNQQFRCSGCYSLCHGLVYGCQSCEFFLHEACATAPRS 96

Query: 61  LHHPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNL 120
           L HPSHP HHLTLLPS TYPDGSFLCNACGATG++FCFSCI CD+DLHVDC LLP+QL+L
Sbjct: 97  LQHPSHPSHHLTLLPSPTYPDGSFLCNACGATGSSFCFSCIPCDIDLHVDCGLLPQQLDL 156

Query: 121 KSHRHSLSLVFSASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGVRND 180
           +SHRH+LSL+FS  SS+CN CR AIDSRYWSYSCSTCNF++HTYCAT P AP VGG+RND
Sbjct: 157 ESHRHTLSLLFSPPSSICNLCRRAIDSRYWSYSCSTCNFDIHTYCATTPTAPPVGGMRND 216

Query: 181 RYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQMQIVN 240
           R++QFPAV + DYDSVSP       GGA  VNP   VV DPFL+AQAEL+ELQMQMQIVN
Sbjct: 217 RHLQFPAVDQEDYDSVSPVDR---YGGATTVNPRDGVVVDPFLQAQAELHELQMQMQIVN 276

Query: 241 EMAKMMASVNLSSLAP 257
           EMAKMMASVNLSSLAP
Sbjct: 277 EMAKMMASVNLSSLAP 289

[Close]

BLAST of Lsi03G017430 vs. NCBI nr
Match: XP_007029009.1 (PREDICTED: uncharacterized protein LOC18599120 [Theobroma cacao] >EOY09511.1 Cysteine/Histidine-rich C1 domain family protein, putative [Theobroma cacao])

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-54
Identity = 120/259 (46.33%), Postives = 154/259 (59.46%), Query Frame = 0


Query: 3   EYKHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGCQSCEFFLHKACATAPRSLH 62
           EYKHF H H+L++YQ+Q    + ++RCSGC+S C G  YGC  C+FFLH+ C  A RSL 
Sbjct: 2   EYKHFGHQHNLRIYQLQPG--DHEYRCSGCDSFCSGSAYGCLGCKFFLHEQCGNAGRSLQ 61

Query: 63  HPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKS 122
           HPSHP HHLTL+P +T+  G+F CNACG TG AF + C LCD+DLHV CA LP+ +  +S
Sbjct: 62  HPSHPFHHLTLVPYTTHLAGTFACNACGDTGNAFSYCCPLCDVDLHVPCAFLPQIIKHES 121

Query: 123 HRHSLSLVFS-----ASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLVGGV 182
           H HSLSL +S      SS  C+ C   +D +YWSY+C  CNF  H  CA          +
Sbjct: 122 HLHSLSLTYSLPFPNVSSRFCDICHKLLDCKYWSYNCFACNFAAHALCAAKE-------M 181

Query: 183 RNDRYVQFPAVGEGDYDSVSPAGYGVID--GGAAAVNPPVVVVEDPFLKAQAELYELQMQ 242
           R +          G     S   +   D   G     P    ++DP L+A  EL  L++Q
Sbjct: 182 RRETCHGEHVSSSGTTAPQSNEIHLKEDAASGTTQDQPEPAEIQDPTLQAMCELERLKLQ 241

Query: 243 MQIVNEMAKMMASVNLSSL 255
           MQ+ NE+AKMMAS NLSSL
Sbjct: 242 MQMTNELAKMMASFNLSSL 251

[Close]

BLAST of Lsi03G017430 vs. TAIR 10
Match: AT2G42060.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-45
Identity = 111/273 (40.66%), Postives = 144/273 (52.75%), Query Frame = 0


Query: 3   EYKHFSHPHDLKLYQIQ-EDQTNQQFRCSGCESLC--HGLVYGCQSCEFFLHKACATAPR 62
           EYKHFSHPH LKL QIQ    ++    CSGCES        Y C +C+F LH+ C  A R
Sbjct: 2   EYKHFSHPHTLKLQQIQPHKSSDSSVICSGCESAISESETAYICSTCDFNLHEQCGNAVR 61

Query: 63  SLHHPSHPP-HHLTLLPSSTYPDGSFLCNACGAT-GTAFCFSCILCDLDLHVDCALLPEQ 122
            + HPSH   HHLTL+P +TY  G+FLC ACG T G  F + C LCD DLHV CA LP+ 
Sbjct: 62  GMQHPSHAGLHHLTLVPYTTYSAGTFLCRACGCTGGKGFSYCCPLCDFDLHVQCAHLPQV 121

Query: 123 LNLKSH-RHSLSLVFSA------------SSSVCNFCRCAIDSRYWSYSCSTCNFNVHTY 182
           L  +SH  HSL LV+++            +  VCN C   +D R+WSY+C  CN+++H  
Sbjct: 122 LVHESHPMHSLLLVYNSTPPMSFTQFGFGNQLVCNLCNMTMDGRFWSYNCYACNYHIHAS 181

Query: 183 CATAPNAPLVGGVRNDRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVV----VED 242
           CA     P+     N         G  D      A    + G        V      VED
Sbjct: 182 CAVNKPNPVAASAEN--------CGASDEGKTPTAESVPVQGLETEQTEQVAAITEQVED 241

Query: 243 PFLKAQAELYELQMQMQIVNEMAKMMASVNLSS 254
           P L+ Q EL +LQ+++ + + +A M+ S NLSS
Sbjct: 242 PVLRQQLELQKLQLELDMSSALANMIGSFNLSS 266

[Close]

BLAST of Lsi03G017430 vs. TAIR 10
Match: AT2G27660.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 68/176 (38.64%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 6   HFSHPHDLKLYQIQEDQTNQQFRCSGCE-SLCHGLVYGCQSCEFFLHKACATAPRSLHHP 65
           HFSHPH L+L             CS C+ +  +G VY C+ C F LH++C+   + + HP
Sbjct: 14  HFSHPHRLQLTPATSSPP-----CSACKLTGGNGRVYSCRPCNFSLHESCSKMKQVITHP 73

Query: 66  SHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKSH- 125
           SHP H L+LL +  Y  G F C+ CG  GT F + C +CD D+H  CA  P  +  KSH 
Sbjct: 74  SHPSHTLSLLVAPVYDGGYFNCDGCGIHGTGFSYQCSVCDFDIHALCAYKPLSIIHKSHP 133

Query: 126 RHSLSLVFSASSSV-----CNFCRCAIDSRYWSYSCSTCNFNVHTYCATAPNAPLV 175
           +H+L L F +         C+ CR  I    W Y C  C F+ H  C T PN  L+
Sbjct: 134 QHNLKLAFQSPYGANKGFSCDICR-KIGKNQWLYRCIPCEFDAHVGCITGPNPHLL 183

[Close]

BLAST of Lsi03G017430 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 5   KHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGC--QSCEFFLHKACATAPRSLH 64
           +H SH H L++++ +++    +  CSGCE    G  + C    C++FLHK+C   PR  +
Sbjct: 13  RHASHNHPLRVFKARDE---DEVVCSGCELELTGQAFKCMKSDCDYFLHKSCFDLPRETN 72

Query: 65  HPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKS 124
           H SHP H LTLL S  Y   S+ C+ACG  G+ F ++C  C  D+HV CA +PE +  + 
Sbjct: 73  HKSHPNHSLTLLHSPPYGQ-SYTCDACGEYGSGFTYNCSECQYDVHVGCAFIPETVERED 132

Query: 125 HRHSLSLVFS--------ASSSVCNFCRCAIDSRYWSYSCSTCNFNVHTY-CA 167
           H H L+L+++         +  +C+ C   +    W Y C  C++  H + CA
Sbjct: 133 HEHPLTLLYNTPCKGREDGAKFICDVCEEKMSENLWVYYCKECDYGTHVHSCA 181

[Close]

BLAST of Lsi03G017430 vs. TAIR 10
Match: AT2G28270.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 118.6 bits (296), Expect = 7.2e-27
Identity = 61/184 (33.15%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 5   KHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGC--QSCEFFLHKACATAPRSLH 64
           +H SH H L+++  +E+    +  CSGCE    G  + C    C++FLHK+C   P  +H
Sbjct: 12  RHPSHNHPLRVFNSKEE---DEIICSGCEHDLIGQAFKCTKSECDYFLHKSCFDLPGEIH 71

Query: 65  HPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKS 124
           H SH  H LTLL S      ++ C+ACG  G+AF + C  C   +HV CA +PE +  + 
Sbjct: 72  HKSHTNHPLTLLHSPPNGLSTYTCDACGEYGSAFTYHCSECKYHVHVGCAFVPENVKRED 131

Query: 125 HRHSLSLVFSASSS--------VCNFCRCAIDSRYWSYSCSTCNFNVHTYCATA--PNAP 177
           H H L+L+++            +C+ C   +    W Y C  C++  H +  T    N P
Sbjct: 132 HEHPLTLLYNTPCKGRKDGVVFICDVCEVDVSENLWVYYCKECDYGTHVHSCTTNEDNGP 191

[Close]

BLAST of Lsi03G017430 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-25
Identity = 71/249 (28.51%), Postives = 121/249 (48.59%), Query Frame = 0


Query: 5   KHFSHPHDLKLYQIQEDQTNQQFRCSGCESLCHGLVYGC--QSCEFFLHKACATAPRSLH 64
           +H SH H L+ ++    Q  ++  CSGC+    G  + C    C++FLHK+C   PR   
Sbjct: 9   RHPSHNHPLRSHKA---QVEEEIICSGCDLDLIGAAFKCTKSECDYFLHKSCFELPRETR 68

Query: 65  HPSHPPHHLTLLPSSTYPDGSFLCNACGATGTAFCFSCILCDLDLHVDCALLPEQLNLKS 124
           H +HP H L LL S  Y + ++ C+ACG  G+ F ++C +C  D+HV C  +PE +  + 
Sbjct: 69  HKAHPDHPLILLYSPPY-ESTYTCDACGEYGSGFTYNCSICQYDVHVGCVSMPESVEREG 128

Query: 125 HRHSLSLVFSASSS-----VCNFCRCAIDSRYWSYSCSTCNFNVHTY-CATAPNAPLVGG 184
           H H L+L++ +         C+ C+  +    WSY C  C++  H + CA          
Sbjct: 129 HAHPLTLLYRSPYQNGLIFNCDVCQETVPDNLWSYYCKECDYGTHLHSCAVE-------- 188

Query: 185 VRNDRYVQFPAVGEGDYDSVSPAGYGVIDGGAAAVNPPVVVVEDPFLKAQAELYELQMQM 244
              +   + P  G G     + +G      G+AA     +      L+AQ E+ ++Q+++
Sbjct: 189 -EEEAEEEEPKRGGGSARGNTKSGGNKGGRGSAASELAAM------LEAQREMEKMQIEL 238

Query: 245 QIVNEMAKM 246
            +  + AK+
Sbjct: 249 HMEMQRAKI 238

The following BLAST results are available for this feature:

BLAST of Lsi03G017430 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G017430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DP40	9.6e-120	83.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7W5	9.6e-120	83.66	uncharacterized protein LOC103486755 OS=Cucumis melo OX=3656 GN=LOC103486755 PE=...	[more]
A0A0A0LF12	7.6e-117	81.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806240 PE=4 SV=1	[more]
A0A061EXI4	1.4e-54	46.33	Cysteine/Histidine-rich C1 domain family protein, putative OS=Theobroma cacao OX...	[more]
A0A5C7IV10	4.5e-53	45.77	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001508 PE=4 SV=1	[more]

BLAST of Lsi03G017430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904463.1	1.2e-129	89.06	uncharacterized protein LOC120090827 [Benincasa hispida]	[more]
XP_008443040.1	2.0e-119	83.66	PREDICTED: uncharacterized protein LOC103486755 [Cucumis melo] >KAA0043741.1 unc...	[more]
XP_004136731.1	1.6e-116	81.25	uncharacterized protein LOC101202742 [Cucumis sativus]	[more]
KGN59437.2	1.6e-116	81.25	hypothetical protein Csa_002578 [Cucumis sativus]	[more]
XP_007029009.1	2.9e-54	46.33	PREDICTED: uncharacterized protein LOC18599120 [Theobroma cacao] >EOY09511.1 Cys...	[more]

BLAST of Lsi03G017430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42060.1	1.2e-45	40.66	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G27660.1	1.0e-28	38.64	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G44380.1	2.5e-27	34.68	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G28270.1	7.2e-27	33.15	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G44370.1	3.0e-25	28.51	Cysteine/Histidine-rich C1 domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 64..112 e-value: 3.2E-11 score: 43.4 coord: 7..55 e-value: 9.0E-9 score: 35.5 coord: 121..166 e-value: 1.1E-8 score: 35.3
None	No IPR available	PANTHER	PTHR46288	FAMILY NOT NAMED	coord: 1..253
None	No IPR available	PANTHER	PTHR46288:SF16	BNAC03G23620D PROTEIN	coord: 1..253
None	No IPR available	SUPERFAMILY	57889	Cysteine-rich domain	coord: 32..125
None	No IPR available	SUPERFAMILY	57889	Cysteine-rich domain	coord: 121..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017430.1	Lsi03G017430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion