Lsi03G017270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Myb family transcription factor family protein
Location	chr03: 28634444 .. 28634968 (-)
RNA-Seq Expression	Lsi03G017270
Synteny	Lsi03G017270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGTTTCCCAAATTTCTTCACTCCAAGTTTTGGCTTCATCTTCATCTTCAAGCTTAAGACTGGTGAAATTCAAAGCTGTTTTGCAGACTCTCATTCTTTCTGTGGCTAGAGCTATCTCCCGAGCCAAAACGACGGCGCTTCACATCTTAAAACAAGCCAATCATCAATCCTCTATAGCTTTGAAGAGGAACAAAAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTGACTCCCGCAGTGCTCACGTGGGACCATGAATACTCCGGCGCCGCCGACCAGCTTGGTGGGTATTTGCAGTGGCTGGAGGAGAGAGATAATAGTAATAATAAGATTATTAAAGATGAAGATCAGGCTGATCATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAACATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTACAGGAGATTTCAAGACATGATGGCCAGAAGCTTTTGA

mRNA sequence

ATGAAAATGGTTTCCCAAATTTCTTCACTCCAAGTTTTGGCTTCATCTTCATCTTCAAGCTTAAGACTGGTGAAATTCAAAGCTGTTTTGCAGACTCTCATTCTTTCTGTGGCTAGAGCTATCTCCCGAGCCAAAACGACGGCGCTTCACATCTTAAAACAAGCCAATCATCAATCCTCTATAGCTTTGAAGAGGAACAAAAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTGACTCCCGCAGTGCTCACGTGGGACCATGAATACTCCGGCGCCGCCGACCAGCTTGGTGGGTATTTGCAGTGGCTGGAGGAGAGAGATAATAGTAATAATAAGATTATTAAAGATGAAGATCAGGCTGATCATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAACATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTACAGGAGATTTCAAGACATGATGGCCAGAAGCTTTTGA

Coding sequence (CDS)

ATGAAAATGGTTTCCCAAATTTCTTCACTCCAAGTTTTGGCTTCATCTTCATCTTCAAGCTTAAGACTGGTGAAATTCAAAGCTGTTTTGCAGACTCTCATTCTTTCTGTGGCTAGAGCTATCTCCCGAGCCAAAACGACGGCGCTTCACATCTTAAAACAAGCCAATCATCAATCCTCTATAGCTTTGAAGAGGAACAAAAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTGACTCCCGCAGTGCTCACGTGGGACCATGAATACTCCGGCGCCGCCGACCAGCTTGGTGGGTATTTGCAGTGGCTGGAGGAGAGAGATAATAGTAATAATAAGATTATTAAAGATGAAGATCAGGCTGATCATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAACATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTACAGGAGATTTCAAGACATGATGGCCAGAAGCTTTTGA

Protein sequence

MKMVSQISSLQVLASSSSSSLRLVKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAADQLGGYLQWLEERDNSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF

Homology

[Close]

BLAST of Lsi03G017270 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 132/178 (74.16%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLI S+ARAISRAKTTA          ++IAL
Sbjct: 12  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF-------QSANIAL 71

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAA--DQLGGYLQWLEERD 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH     A  DQLGGYLQWLEERD
Sbjct: 72  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERD 131

Query: 125 -----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF 175
                N+NN     ED+ + VNEIDKLAEIFIA CHEKFKLEKQESYRRFQDMMARSF
Sbjct: 132 VNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 182

[Close]

BLAST of Lsi03G017270 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 132/178 (74.16%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLI S+ARAISRAKTTA          ++IAL
Sbjct: 12  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF-------QSANIAL 71

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAA--DQLGGYLQWLEERD 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH     A  DQLGGYLQWLEERD
Sbjct: 72  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERD 131

Query: 125 -----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF 175
                N+NN     ED+ + VNEIDKLAEIFIA CHEKFKLEKQESYRRFQDMMARSF
Sbjct: 132 VNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 182

[Close]

BLAST of Lsi03G017270 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.6e-55
Identity = 129/178 (72.47%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLILS+ARAISRAKTTA          ++ AL
Sbjct: 7   SSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAF-------QSANTAL 66

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEY---SGAADQLGGYLQWLEER 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DH      G  DQLGGYLQWLEER
Sbjct: 67  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLEER 126

Query: 125 D----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF 175
           D    +++N  ++D+ +   VNEIDKLAEIFIA CHEKFKLEKQESYRRFQDMMARSF
Sbjct: 127 DVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 177

[Close]

BLAST of Lsi03G017270 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.2e-50
Identity = 122/175 (69.71%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 1   MKMV--SQISSLQVLASSSSSSLRLVKFKAVLQTLILSVARAISRAKTTALHILKQANHQ 60
           MKMV  S  SSLQ+  SSSS        KA+LQTLILS+ARAISRAKTTALHILKQANHQ
Sbjct: 1   MKMVSLSPSSSLQIFPSSSS-------LKALLQTLILSLARAISRAKTTALHILKQANHQ 60

Query: 61  SSIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAADQLGGYLQWLE 120
           S+IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LTWD   SGAAD L GYLQWLE
Sbjct: 61  SAIAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWDDNSSGAADHLAGYLQWLE 120

Query: 121 ERDNSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARS 174
           +RD       K+E+   H NEIDKLA+IFIA CHEKF+LEKQESYR+FQ+M ARS
Sbjct: 121 DRD-------KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 158

[Close]

BLAST of Lsi03G017270 vs. ExPASy TrEMBL
Match: A0A5D3DQ67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005520 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.6e-49
Identity = 121/167 (72.46%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLI S+ARAISRAKTTA          ++IAL
Sbjct: 12  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF-------QSANIAL 71

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAA--DQLGGYLQWLEERD 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH     A  DQLGGYLQWLEERD
Sbjct: 72  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERD 131

Query: 125 -----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESY 164
                N+NN     ED+ + VNEIDKLAEIFIA CHEKFKLEKQESY
Sbjct: 132 VNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of Lsi03G017270 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 5.0e-58
Identity = 136/173 (78.61%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 5   SQISSLQVLASSS--SSSLRLVKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIA 64
           S  SSLQ+L SSS  S S  LVKFKAVLQTLILS+ARAISRAKTTA HILKQANHQ +IA
Sbjct: 9   SPFSSLQILPSSSSPSPSSSLVKFKAVLQTLILSLARAISRAKTTAFHILKQANHQYAIA 68

Query: 65  LKRNKKKLLYGSFRLHYNWCSVSSNKY-SHVTPAVLTWDHEYS----GAADQLGGYLQWL 124
           LKRNKKKLLYGSFRLHYNWCSVSSN Y SHVTP V+TWDHEYS    G  DQLGGYL+WL
Sbjct: 69  LKRNKKKLLYGSFRLHYNWCSVSSNYYNSHVTPPVITWDHEYSGGGGGGGDQLGGYLEWL 128

Query: 125 EERDNSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMM 171
           EER+N NNKI  +E     VNEIDKLAEIFIA  HEKFKLEKQESYRRFQDM+
Sbjct: 129 EEREN-NNKIKNEEG----VNEIDKLAEIFIARSHEKFKLEKQESYRRFQDMI 176

[Close]

BLAST of Lsi03G017270 vs. NCBI nr
Match: XP_008443602.1 (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 uncharacterized protein E6C27_scaffold236G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-55
Identity = 132/178 (74.16%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLI S+ARAISRAKTTA          ++IAL
Sbjct: 12  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF-------QSANIAL 71

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAA--DQLGGYLQWLEERD 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH     A  DQLGGYLQWLEERD
Sbjct: 72  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERD 131

Query: 125 -----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF 175
                N+NN     ED+ + VNEIDKLAEIFIA CHEKFKLEKQESYRRFQDMMARSF
Sbjct: 132 VNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 182

[Close]

BLAST of Lsi03G017270 vs. NCBI nr
Match: XP_031739057.1 (uncharacterized protein LOC116402823 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 129/178 (72.47%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLILS+ARAISRAKTTA          ++ AL
Sbjct: 13  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAF-------QSANTAL 72

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEY---SGAADQLGGYLQWLEER 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DH      G  DQLGGYLQWLEER
Sbjct: 73  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLEER 132

Query: 125 D----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARSF 175
           D    +++N  ++D+ +   VNEIDKLAEIFIA CHEKFKLEKQESYRRFQDMMARSF
Sbjct: 133 DVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 183

[Close]

BLAST of Lsi03G017270 vs. NCBI nr
Match: XP_022983138.1 (uncharacterized protein LOC111481779 [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-50
Identity = 122/175 (69.71%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 1   MKMV--SQISSLQVLASSSSSSLRLVKFKAVLQTLILSVARAISRAKTTALHILKQANHQ 60
           MKMV  S  SSLQ+  SSSS        KA+LQTLILS+ARAISRAKTTALHILKQANHQ
Sbjct: 1   MKMVSLSPSSSLQIFPSSSS-------LKALLQTLILSLARAISRAKTTALHILKQANHQ 60

Query: 61  SSIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAADQLGGYLQWLE 120
           S+IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LTWD   SGAAD L GYLQWLE
Sbjct: 61  SAIAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWDDNSSGAADHLAGYLQWLE 120

Query: 121 ERDNSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARS 174
           +RD       K+E+   H NEIDKLA+IFIA CHEKF+LEKQESYR+FQ+M ARS
Sbjct: 121 DRD-------KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 158

[Close]

BLAST of Lsi03G017270 vs. NCBI nr
Match: TYK25410.1 (uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 9.5e-49
Identity = 121/167 (72.46%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 5   SQISSLQVLASSSSSSLRL-VKFKAVLQTLILSVARAISRAKTTALHILKQANHQSSIAL 64
           S  SSLQVL S SSS+LRL +KFKA+LQTLI S+ARAISRAKTTA          ++IAL
Sbjct: 12  SSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF-------QSANIAL 71

Query: 65  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAA--DQLGGYLQWLEERD 124
           KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH     A  DQLGGYLQWLEERD
Sbjct: 72  KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERD 131

Query: 125 -----NSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESY 164
                N+NN     ED+ + VNEIDKLAEIFIA CHEKFKLEKQESY
Sbjct: 132 VNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of Lsi03G017270 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 0


Query: 14  ASSSSSSLRLVKFKAVLQTL----ILSVARAISRAKTTALHILKQANHQSSIAL------ 73
           +SSSSSS   +K K ++Q L    +    RA+++AK+  L I K  ++     L      
Sbjct: 9   SSSSSSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKKRKLMMLFPT 68

Query: 74  --KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPA--VLTWDHEYSGAAD----QLGGYLQ 133
              +N++K+ +GSFRLHYNWCS      SHV P      +   Y    +    QL GYL+
Sbjct: 69  KASKNQRKIFFGSFRLHYNWCS------SHVVPVPQPFPFPSSYINGEEEDDSQLSGYLE 128

Query: 134 WLEERDNSNNKIIKDEDQADHVNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMAR 173
           WLE +   + + I D       ++ID LA++FIA CHEKF LEK ESYRRFQ+M+ R
Sbjct: 129 WLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEMLER 179

[Close]

BLAST of Lsi03G017270 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-18
Identity = 77/214 (35.98%), Postives = 106/214 (49.53%), Query Frame = 0


Query: 1   MKMVSQISSLQVLASSSSSSLRLVKFKAVLQTLILS----VARAISRAKTTALHIL--KQ 60
           +K  S   S    +SSSS +   +K K+++QTLI+S    + R ISR  +  + +L  KQ
Sbjct: 5   LKSTSSSMSSSQCSSSSSPTSSSMKLKSLIQTLIISQVCRLLREISRVSSILVRVLRKKQ 64

Query: 61  ANHQSSIAL-------KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVL---------- 120
            N  S  +L       K+ K  +L+GSFRLHYN+CS      SHV P             
Sbjct: 65  YNFLSVSSLLYPKRVSKKQKNNILFGSFRLHYNFCS------SHVVPVSAPVRLPEELYL 124

Query: 121 -------TWDHEYSGAA-----------DQLGGYLQWLEERDNSNNKIIKDEDQADHVNE 174
                  TW+  YS  +            QL  YL+ LE++        ++E+    +NE
Sbjct: 125 AHLVHESTWESMYSTESMDGRDDDDQEPSQLSSYLRQLEDKVKDG----QEEETETMMNE 184

[Close]

BLAST of Lsi03G017270 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13
Identity = 65/180 (36.11%), Postives = 92/180 (51.11%), Query Frame = 0


Query: 10  LQVLASSSSSSLRLVK--FKAVLQTLILSVARAISRAKTTALHILKQANHQSSIALKRNK 69
           +Q+  SSSSS    +K  F  ++   +  + R++SRA++  + I            K NK
Sbjct: 1   MQLKRSSSSSHSTNLKTLFINLITHSLYRLLRSLSRARSVLIEI-----------SKHNK 60

Query: 70  KKLLYGSFRLHYNWCSVSSNKY------SHVT-----PAVLTWDHEYSGAADQLGGYLQW 129
           K+L    F + +     S N++      SHV      P   + D       +    YLQW
Sbjct: 61  KRL----FMMMFYTTKSSMNQHNIFFGSSHVVVPVTKPFPFSLDGHVEDEDNLESQYLQW 120

Query: 130 LEERDNSNNKIIKDEDQADH---VNEIDKLAEIFIATCHEKFKLEKQESYRRFQDMMARS 174
           LEER + NN I  D+   +     ++ID+LA+ FIA CHEKF LEK ESYRRFQDM+ARS
Sbjct: 121 LEERVDENNNINDDQSVGERDVGDDDIDRLADKFIARCHEKFLLEKVESYRRFQDMLARS 165

The following BLAST results are available for this feature:

BLAST of Lsi03G017270 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G017270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJT8	1.9e-55	74.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8H1	1.9e-55	74.16	uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=...	[more]
A0A0A0LBV5	5.6e-55	72.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1	[more]
A0A6J1J6X1	4.2e-50	69.71	uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779...	[more]
A0A5D3DQ67	4.6e-49	72.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi03G017270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906153.1	5.0e-58	78.61	uncharacterized protein LOC120092033 [Benincasa hispida]	[more]
XP_008443602.1	4.0e-55	74.16	PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 unc...	[more]
XP_031739057.1	1.2e-54	72.47	uncharacterized protein LOC116402823 [Cucumis sativus]	[more]
XP_022983138.1	8.6e-50	69.71	uncharacterized protein LOC111481779 [Cucurbita maxima]	[more]
TYK25410.1	9.5e-49	72.46	uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi03G017270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57950.1	1.1e-21	39.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06790.1	4.2e-18	35.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42180.1	1.8e-13	36.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 138..172 e-value: 5.0E-14 score: 51.6
None	No IPR available	PANTHER	PTHR33450	EMB\|CAB67623.1-RELATED	coord: 5..174
None	No IPR available	PANTHER	PTHR33450:SF4	DUF761 DOMAIN PROTEIN	coord: 5..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017270.1	Lsi03G017270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003774	cytoskeletal motor activity
molecular_function	GO:0000166	nucleotide binding