Lsi03G017040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein FAR1-RELATED SEQUENCE 5
Location	chr03: 28399757 .. 28405753 (-)
RNA-Seq Expression	Lsi03G017040
Synteny	Lsi03G017040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTGTAAAAATAGGAGGCTTGAGGAGGAATAAAGGGAAAAAGAAATATTATGTAAACATTGGGAAAGATAAACTTTGTTAAGGAGTGGTAGTGGTTGGTGTGGTTTTTGGAGGAAAAAAGTTTGTCTATTTGAATTTGGTTTGATTACTTAATGAGCAAAAACTTTGTTGAATTATATATGCTTACTCTTTTGCTATTTTAATTCATCTTTATCGTCATATATCTAATTTTTATTAATTTATCGATTATAAAATTTGAGTTAAACTTAAACGTAGCTTAGTAGATTAGACAAAATAAAGATTTATGAAATGTGATGAAAGATTTGAGATTCTCCACTTTTACGTTTATTGAATTCATATATAATCTTTTCTTGAAATATAATCTTAAATTTTAATATTACAATAATTATTAATCCATAAAATGTGATAGAAGATAAGAAAAGTAGCATATCAATAATTCAATATACATTATTACTTGATATGACCATATCATGAACATTAGGTTTCAATCTCTTAAATATGCCTAAGTACCGAAAATCTATAGGTTGAAGAATATTCTAATTTTATGGGAAAAAAGATCCTCAGATTTTACAAATAATGATTAAGTGCAGTTTTAGCTACACCTATCTCTCATTTTTTTTGTCACATGACCGTTTTTAAGAGAGTAACACTATAAAAAAGGGAGATTCGAAAATCATCTAAAAATATCAATATGCTTATATATACATTGATGGTAGTTTTGATGCTTCTATCCATGAATGGTAGGTAGGTTAGGAAGTTATTTTTTCGGTTCAAAGTTTAAAAAATATATTTTTTTTCTAGTTCAAATTTTGAAAATATTTTAGTATACATTTATGTTTCATAAATCTAAATTATTTAAGTGGTTTTGAATAATGGTACACTAGCATATTTTAATAATTTAGATTTTTTTTTTTTGAAATTATATTTTAGATTTCAGTTTGTTTGTTTGAAATTTATTATTTTGTTATATTCCAGTTATCCAATTACGAGATAATCTTAACCGTTTATAAAGTTTAATAATACCGATTTTCTTTTAATATAAAATCACTTTTAAAATATATTAGTTAATTTTAAAGCTTTTTGAATAGGCGTTAAAGATACACCAAATTTAAAATGGGTAATTGTAATAGAGACACTTTTAGGATTAATAATTAAGTATATAGTAAAATTTAAAAAAAAATTATAAATATAGCAAATTCTATAAGCGATAAGACTTTATATACTCTTATATAAACTCCGACAATTTGTACTAAATTTTACTAGAAGTGAACATTTGCAACTATTCTATTGAAATTAAAGAGTAATTGAAAGTTGGTCGAGTAGGTTATTATAGTCTAGGCTAGTTATTAAGAACTTACCATTAACTACAATATTACTATTTTAAATGTTTGCATTTGTTACTTTATTATTTTCTACCTTTTCTACACCGACTATTATAACCACGAGTAACTATAATAACTAACATCATTTTTATACTTCACGATCTCATTTCGTTCGGCCTTCGATTGTTTACGTATTCCCAATAATCTCATCACATTATAGCTCTTCAAACTGAGACTAAATTTTTACACAAATTTCTAATTGAAGAAAAGATGAAGTTGTTGATTGGACCACCTAAGTATTGGATCTAAGCCCAAAGTCCCATCCCATTACAAATCAACAACACATTACACAATAGACATCTCTGTTTCCAGTTTTCACCTTCTTATCTTTCCTTCCCTTCCTCTTCTTTCCTTTTTCGACTCCCATTTTCCTCCATTCTTAAACTCTTTTCTCGAAGCTTCTTTCACATTACTCCCAACCCAACAACAAACGCCGCTACTCTCTTTCTTTCTTCAGATTGCTTCTGCCCAATCAATTCTTCCATCTCTGACCACGGTATTGTTTCTCCTTCTTCTTCTTTTTCCTCTTTTGCCAATCCTCTGGGTTCCAGATTGAAGTTGCGATAACAGAATTGAATTGAATACGCTTGAAAACTGTATTCTTGTTCTGGGTTTCATTTTCTATTGGAAATTCAATTGTAATTTCTGTATACTGAACACAGAGGCCGAAATTTGCGTCACAGAGTCGACTCTAGTTTCCATTTTCGGTACTTGGGTGTGCCGCCATTTTTTGTTTGGATGATCTAAATTAGGAAATGGGTTATTTATATTTGACGTTTTATGTCAGTTGTTCTTTGTTTCTCTTCCATTGCTGATGGATTTTCCTTTCTGCCCTGATAATTCAGTCAAGAGGGATTTTTTCTTCTCTTTTTTCCCTTTTGTGCTTATAGAAATCAATGTGCGATCATCTTTCTTTCTTTTTTTACTTGCTTCCTGAGTGATTTAGTTATAAATAATGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGTCAGTGTTTCTCTTCCCCTATTGTTATCTTCAATCAAACATCATATGTAAGAGTAAGACTGTGTTCTTTACTAGTATGTTTTCTGATGAGGCCTAAAAATCAAGGATTGGAACTTGCTTTATGGAGACATATTTTGATTCTATTTGATGGATTGTTCAAGAGAATCAATTTTACTTTTTAAGGGAAATGGAAGTGAAAACATCTTTGCCTACCCACCCCATCAACTGCTTTATAGGGACTCATCAAATTCAAAGATTATGCATATTAACTGTAGTTGTTACCTTGCTTTTAGGGAGAAGCTTCTAGTTTCATCGACCATTCTGAGCTTTGCATTTTCCTACCAACCTGCAATGTTACACCCTATTTATTTTTCTCCATACTGAATTTGGCCTACATTTTAGTTTTATTATTATTATTATTATCATTTTCTTGCCCTTTTTCCTTGCATTATCATATCAACACATGGGTGATACTCATATGTGCCTTGGAAAATTAACTTCGTTGTTGAATGTGGATAAATGGAGGACGGAGGGTATTTTTTAGTTGTGCCCCTGTGCAGTTATGTCCTGGTCCAGTGTTTTGTTGGGTTTGCTTTATACACTCCTGGTTTCTTGCACCATCTTGAATTCTTTCTTTTTCATAATGGAAGTATTGTTTCGTATCTAGAAAAGATAGGGAATTAGTGTATGTAGTTGTGAGTGTTGAGTGTTAGGAAAAATTGTTCAGAGATGTCGCCACAGTGTGGCAGATAGTTTTGAAATGTTGGATGTTTTAAAGAAAAACTAAAAAGGTACCTCAAATATGTATTTAGTGGTATTAGGAAGCATATAGATTTTTAATCTATATCAAACAGTTATTAAGAGGCTTTGTGACAACCTCATTGAATAATTTTTCTTGTTAGAGTTTATTCACTTGATTTAACCATTCAAAGTCTGTGAGTCACATTTTAGAATTTAAGTTGTTGGGTTATCTCCATAGTGATAGACATCTCAATGGGTTTAGATGAAAAAGGAAGCAGAACTCATCAGTACTTGAACTTCCAATCTATCTAATAACTAATAGTTATGAAGCAAATTACATGTCAATTCCTTAGAAATGCCTAATAGACTCAATATGGGGTGTGTTGTTTTGGGAGACCTTTGGTTAGAAAGGAACAATAGAACCTTTCAAAGCTTAGAGAGGGTCCTTATGATGTTTAATCCCTTGCTAGGTTCTATGATTCTCTTTGGGTGTAGGTGAAGAAACCTTTTTGTAACTATACGTGAGGTCTTATTGTTCTAGATTGGAGACCCTTCCTTCAGTGGAAATTCCCTTTTGTGGGCTTGTATTTTTGGATGCTCTTGTTCTCGTTCCTTCTTTCTTAATGAAGGTTCAGTTCTTTATATATATGTAGACTCAATATGGCTATGGCCCTCTGTATTTTGTTATGAAATTCTTTAGGATGACGTGCCTTTCTTGCTTCTGTATCCTGGAATAAATTTCAATGAGCGGAATCTTCTTGAGACTGCCATCCCCCCTAAGCCAACTTGTTCTCCATTTTCAAACTTCCTACATCTCATCTCTGTATCTTCTTTGTTCCAGCCATTTGGAGTGCAGTAACCAGACAAATATGCACACATGAGTAGATGACAAATCAATAGAACTATTCAAAGTCTTAATACTCATGGCTATACTGGCAAAATTACTAAGAATCAAACAATCCCCTCCGCCCCAACAAAAAAATTAGGAAAACTACAATTTTTCGCACATACTAACTCAGGCTTCCCACCTCCCAGGCATGTCTGCCTCTTTTCACCAACTCATTCCTTCCAACACCTACCCATTATGTTTCCTAGCCTTCTCGTTGTATAGGTGAACTGCATTGATCTTTTCTATAACTTGATATGTTTTGATGCCTTACGTGATATGGTTGCGACTTTCGTACCAATTGCAATGCTCTGCATTTTCACCTCTAACTAAATGGATGGAACCATGTGGAACACCCACCTTGCATATTTAGTTGCTCATGAATATTCTACTATACTATGTTTATCCCTGGTTTGGGAAACTAGTAAACTGACAAGAGATTGGGAACTTTTCAACAAAAGATTAATAAAAAAAAGAAAAAAAATCCTCCACTAGAATGATAGAAGACATTAGAATGCTTTGTATGTTGATAGCTTAATTTTTTTCTGTGGGTGATTGACATATATTTATATTGTTGCATCATGATGAAAAATAATTGATTTTGGACTTCCCTTACAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGGTAGCTTAGCCACCAAGTGAGTATCTGATTGCTACTTGACTACCCTTTCATTTTGAGTTTTTTTTACTGCATCAAAAGTATTTCTTATGTCATTAAGTACAACTAGATTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAGAAAGGAGCAATGCAATATTTCTTCTGTGTATCATAGCAAGCACTGGCATGAAGTAGAAGTACTTGCAGACATCTCAGCGGAGAGACGAGTTTTGAATGAAGAGAGACGATTTCATTTACTCTATAAATGGATTTTATTGAATAACCAATGCAGTCTTTTCAGAAATTTTGCTGAAATTTCCTTTGCTTGTGTATATGTTTGCATCTGATACTGCAGTTGAATCATCCAAATCTTTCTAATGCCCACATGGCTATAATGACAAAAGCAAGAAGATTAGAATTGTTCC

mRNA sequence

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAGAAAGGAGCAATGCAATATTTCTTCTGTGTATCATAGCAAGCACTGGCATGAAGTAGAAGTACTTGCAGACATCTCAGCGGAGAGACGAGTTTTGAATGAAGAGAGACGATTTCATTTACTCTATAAATGGATTTTATTGAATAACCAATGCAGTCTTTTCAGAAATTTTGCTGAAATTTCCTTTGCTTGTGTATATGTTTGCATCTGATACTGCAGTTGAATCATCCAAATCTTTCTAATGCCCACATGGCTATAATGACAAAAGCAAGAAGATTAGAATTGTTCC

Coding sequence (CDS)

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAG

Protein sequence

MDMKKLTCAVLVAAAAVSATMASGEGPASAPGPSSDAAAAALPTVGAFIGAFFAYYFERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHPSVVGGHRYLEVGSARRTTTTLQKAPQKAFFTVYPAPLQTQSEL

Homology

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BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-25
Identity = 80/209 (38.28%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 72  GIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 131
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACD-LLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 132 SEKDGRILARRLGCNKEGY--CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 191
           S +DG I+ R+  C KEG+      R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 192 KFVKEHNHPLVVSP-----REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKI 251
            FVK+HNH LV        R  RQ        I  L       +R+ S   ++     K+
Sbjct: 169 GFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKV 228

Query: 252 VEEHTDQLSRKVQNVVTNLKEFESIEQEI 274
                D      +N + N ++ +SIE EI
Sbjct: 229 GFTEVD-----CRNYMRNNRQ-KSIEGEI 250

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BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 86  LIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGC 145
           + E +GD  LEPY G+EF++ + A+ +Y+ YA + GF +R     RS  DG + +RR  C
Sbjct: 17  IAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVC 76

Query: 146 NKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPRE 205
           +KEG+              + ++R GC A I V+   +GKWV+ +  KEHNH L     E
Sbjct: 77  SKEGF--------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEE 126

Query: 206 ARQT 210
           A+ T
Sbjct: 137 AQTT 126

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BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 91  GDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGY 150
           GD+ LEP  G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 151 CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 201
                   G+  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 105 TPESESS-GSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

[Close]

BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 56/162 (34.57%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 94  ILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 153
           + E   GM+FES++AA  FY +YAR +GF + + + RRS++ G+ +  ++ C++ G   +
Sbjct: 35  VSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---T 94

Query: 154 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEK 213
            R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH   + P +   ++  K
Sbjct: 95  KREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGK 154

Query: 214 DKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 256
           +K    L I    KK L    +E+    +K++ EH  ++  K
Sbjct: 155 NKPAGALAI----KKGLQLALEEE---DLKLLLEHFMEMQDK 183

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BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.9e-15
Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 81  PAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILA 140
           P G EL+E    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 141 RRLGCNKEG----YCVSIRGKFGAVRKPRPSTREG--------CKAMIHVKYDKSGKWVI 200
            +  C++ G    Y  S         K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 201 TKFVKEHNHPLVVSPREARQT 210
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

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BLAST of Lsi03G017040 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.0e-119
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESED AKIFYDKYA
Sbjct: 8   ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.6e-117
Identity = 213/219 (97.26%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERC+LTVDAD GEEGIEGGSFESPAGTELIE DGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDK GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.2e-116
Identity = 213/219 (97.26%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERC+LTVDAD  EEGIEGGSFESPAGTELIE DGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 13  ERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYA 72

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 73  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 132

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 133 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 192

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 193 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 231

[Close]

BLAST of Lsi03G017040 vs. ExPASy TrEMBL
Match: A0A6J1IYB6 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.2e-116
Identity = 213/219 (97.26%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERC+LTVDAD  EEGIEGGSFESPAGTELIE DGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.4e-115
Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILH 276
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LH
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLH 225

[Close]

BLAST of Lsi03G017040 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia])

HSP 1 Score: 438.7 bits (1127), Expect = 4.2e-119
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESED AKIFYDKYA
Sbjct: 8   ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. NCBI nr
Match: XP_038905874.1 (protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida] >XP_038905875.1 protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 436.4 bits (1121), Expect = 2.1e-118
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLLTVDADEGEEGIEGGSFESPAGT+LIECDGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCLLTVDADEGEEGIEGGSFESPAGTQLIECDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSG WVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGTWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQ VVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQKVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.0 bits (1112), Expect = 2.3e-117
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERC+LTVDAD GEEGIEGGSFESPAGTELIE DGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 8.8e-117
Identity = 212/219 (96.80%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. NCBI nr
Match: XP_022935696.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_022935697.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_022935698.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116
Identity = 213/219 (97.26%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERC+LTVDAD GEEGIEGGSFESPAGTELIE DGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQ+GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDK GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 311.6 bits (797), Expect = 7.2e-85
Identity = 149/183 (81.42%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 92  DIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYC 151
           D  +EP EG+ FESEDAAK+FYD Y+R+LGFVMRVMSCRRSEKDGRILARR GCNKEG+C
Sbjct: 17  DFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHC 76

Query: 152 VSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD 211
           VSIRGKFG+VRKPRPSTREGCKAMIHVKYD+SGKWVITKFVKEHNHPLVVSPREAR T+D
Sbjct: 77  VSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLD 136

Query: 212 EKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQ 271
           EKDK+IQELTIELRNKKRLC+ Y+EQL AF KIVEEH++Q+++KV+NVV NLKEFE +E 
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEH 196

Query: 272 EIL 275
            +L
Sbjct: 197 ALL 199

[Close]

BLAST of Lsi03G017040 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-43
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 94  ILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 153
           ++EP+ GMEFESE+AAK FYD YA  +GFVMRV + RRS +DG ++ RRL CNKEG+  S
Sbjct: 30  MVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS 89

Query: 154 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV-VSPREAR----- 213
            R +    RKPR  TREGCKA+I VK +KSG W++TKF KEHNHPL+ +SP   R     
Sbjct: 90  -RPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLP 149

Query: 214 QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 269
           QT DEKD +I+EL+ EL  ++R C+  Q+QL   +K +EEH++ L+  + +V+ ++++ E
Sbjct: 150 QTPDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIE 209

[Close]

BLAST of Lsi03G017040 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-40
Identity = 85/178 (47.75%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 91  GDIIL-EPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG 150
           GD+ L EPY G++FESE+ AK FY +Y+++LGFV+R+M  RRS  DGR LARRLGCNK+G
Sbjct: 3   GDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG 62

Query: 151 YCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQT 210
           +  + +    +      S+REGCKA I VK +KSGKWV+T+F+KEHNH L      +  +
Sbjct: 63  FGPNNQRSSSS----SSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS 122

Query: 211 MDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 268
             +K+++I+ELT E+  + RLC  Y+++L +F+  VE +T++LS KV+++V N+K+ E
Sbjct: 123 FADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176

[Close]

BLAST of Lsi03G017040 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-35
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 82  AGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 141
           A  ++ E  GD   EPY G EFESE AA  FY+ YA ++GFV+RV    RS  DG  + R
Sbjct: 58  AVADMTEAQGD---EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGR 117

Query: 142 RLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVV 201
           +L CNKEGY   +  K   V + R  TR GCKAMI ++ + SGKWVITKFVKEHNH L+ 
Sbjct: 118 QLVCNKEGY--RLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM- 177

Query: 202 SPREAR------QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 261
            P   R      Q  +E DK IQEL  +L  +K+  +TY+  L    + +E+H + LS++
Sbjct: 178 -PGRVRRGCIYDQYPNEHDK-IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKR 237

Query: 262 VQNVVTNLKEFESIEQEILH 276
           +Q++V N++  E  + +  H
Sbjct: 238 IQHIVDNVRNLEQRDHQQNH 249

[Close]

BLAST of Lsi03G017040 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-35
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 82  AGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 141
           A  ++ E  GD   EPY G EFESE AA  FY+ YA ++GFV+RV    RS  DG  + R
Sbjct: 58  AVADMTEAQGD---EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGR 117

Query: 142 RLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVV 201
           +L CNKEGY   +  K   V + R  TR GCKAMI ++ + SGKWVITKFVKEHNH L+ 
Sbjct: 118 QLVCNKEGY--RLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM- 177

Query: 202 SPREAR------QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 261
            P   R      Q  +E DK IQEL  +L  +K+  +TY+  L    + +E+H + LS++
Sbjct: 178 -PGRVRRGCIYDQYPNEHDK-IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKR 237

Query: 262 VQNVVTNLKEFESIEQEILH 276
           +Q++V N++  E  + +  H
Sbjct: 238 IQHIVDNVRNLEQRDHQQNH 249

The following BLAST results are available for this feature:

BLAST of Lsi03G017040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL8	1.7e-25	38.28	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
Q9M8J3	4.1e-16	37.10	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=...	[more]
Q9SWG3	7.0e-16	36.36	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
Q3EBQ3	2.0e-15	34.57	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
Q9LIE5	5.9e-15	36.17	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]

BLAST of Lsi03G017040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLA3	2.0e-119	98.63	protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 P...	[more]
A0A6J1F5F7	5.6e-117	97.26	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J157	1.2e-116	97.26	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IYB6	1.2e-116	97.26	protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3B7B4	1.4e-115	96.79	protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=...	[more]

BLAST of Lsi03G017040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154282.1	4.2e-119	98.63	protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]	[more]
XP_038905874.1	2.1e-118	98.17	protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida] >XP_038905875.1 p...	[more]
XP_023526121.1	2.3e-117	97.72	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_004136586.3	8.8e-117	96.80	protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-R...	[more]
XP_022935696.1	1.1e-116	97.26	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_0229356...	[more]

BLAST of Lsi03G017040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43280.1	7.2e-85	81.42	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	1.8e-43	51.38	Far-red impaired responsive (FAR1) family protein	[more]
AT4G12850.1	1.1e-40	47.75	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	3.1e-35	43.50	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.2	3.1e-35	43.50	Far-red impaired responsive (FAR1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..237
None	No IPR available	PANTHER	PTHR46328:SF17	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	coord: 73..275
None	No IPR available	PANTHER	PTHR46328	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	coord: 73..275
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 112..200 e-value: 2.3E-28 score: 98.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017040.1	Lsi03G017040.1	mRNA