Homology
BLAST of Lsi03G016170 vs. ExPASy Swiss-Prot
Match:
Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)
HSP 1 Score: 635.6 bits (1638), Expect = 6.3e-181
Identity = 322/556 (57.91%), Postives = 430/556 (77.34%), Query Frame = 0
Query: 94 ISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDD 153
+S+ LSS AGT++ ED++EDGFSEL+ + + + ++D++EG+L+++ E
Sbjct: 57 LSNRALSSSAGTKSDQEEDDLEDGFSELE----GSKSGQGSTSSDEDEGKLSADEE---- 116
Query: 154 DVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINR 213
+ ELDL ++T+++ K + ++ SELFK I SAPGLS+ S LDKWV EG EI R
Sbjct: 117 -----EEEELDL--IETDVSRK-TVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITR 176
Query: 214 AEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIA 273
EI+ AML LRRRRM+G+ALQ SEWLEA+ ++E ERDYASRLDL K+RGL K E+ +
Sbjct: 177 VEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQ 236
Query: 274 KIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKR 333
KIPKSF+GE +YRTLLANCV A NVKK+E VFNKMKDLGFP++ F C+Q+LLL+KR+D++
Sbjct: 237 KIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK 296
Query: 334 KIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILA 393
KIADVLLLMEKEN+KPSL TYKILID KG +NDI GMEQ+++TMK EG+ELD ++ A
Sbjct: 297 KIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTA 356
Query: 394 KHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRI 453
+HY+ GLKDKA +LKEME + + ++ + LL +Y L EDEV+R+WKICES P
Sbjct: 357 RHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF 416
Query: 454 EECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQ 513
EE +AAI A+GKL V EAE IF+++VK ++ SS YS +++VY D+KML+KGK+LVK+
Sbjct: 417 EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKR 476
Query: 514 MEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRG 573
M +SGCRI+ TWDA++KLYVEAGEVEKADS L K +++ K + S+M IMD+Y++RG
Sbjct: 477 MAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRG 536
Query: 574 DVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKL 633
DVHNTEKIF KMR +GY +RL QFQ L+QAY+NAK+PAYGM++R+KADN+FPNK++A +L
Sbjct: 537 DVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQL 596
Query: 634 VQVDAFRKTAVSDLLD 650
Q D F+KTA+SD+LD
Sbjct: 597 AQGDPFKKTAISDILD 596
BLAST of Lsi03G016170 vs. ExPASy Swiss-Prot
Match:
Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)
HSP 1 Score: 620.2 bits (1598), Expect = 2.7e-176
Identity = 333/613 (54.32%), Postives = 442/613 (72.10%), Query Frame = 0
Query: 38 RNQGYRV-RTSYVFGKLEVSYSSEGNIAGFGTTAALSDRCISNERNNLATWPSTGIYISS 97
R+Q R+ + V+ KL++ E NIA + A + D+ + R +W S+
Sbjct: 10 RSQSLRLGACNAVYSKLDIPL-GERNIA-IESNALIHDKHEALPRFYELSWSSS---TGR 69
Query: 98 HGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVD 157
LSS AG + +G +D++E D+ + +P E + ++D E E D+ D+
Sbjct: 70 RSLSSDAGAKTTGDDDDLE------DKNVDLATPDETSSDSEDGE-----EFSGDEGDI- 129
Query: 158 DGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEI 217
+G + EL +PE + PSE+FKAI S GLSV S LDKWV +GK+ NR E
Sbjct: 130 EGAELELHVPE-----------SKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEF 189
Query: 218 SLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIP 277
AML LR+RRMFG+ALQ +EWL+ + Q E ERDYA RLDLI+KVRG +K E+YI IP
Sbjct: 190 ESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIP 249
Query: 278 KSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIA 337
+SF+GE +YRTLLAN V +NV+ AE VFNKMKDLGFP++TF CNQ+L+LYKR+DK+KIA
Sbjct: 250 ESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIA 309
Query: 338 DVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHY 397
DVLLL+EKEN+KP+L TYKILID KG SNDI GMEQ+V+TMK+EG+ELD+ +++A+HY
Sbjct: 310 DVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHY 369
Query: 398 ASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRIEEC 457
AS GLK+KA +LKEME + + ++ C+ LL +YG LQ EDEVRR+WKICE NPR E
Sbjct: 370 ASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEV 429
Query: 458 MAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMED 517
+AAI+A+GK+ V +AE +F++V+K ++SS YS +++VY D+KM+++GK+LVKQM D
Sbjct: 430 LAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSD 489
Query: 518 SGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVH 577
SGC I LTWDAV+KLYVEAGEVEKA+S L K +Q Q KPL +S+M +M +Y RRGDVH
Sbjct: 490 SGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVH 549
Query: 578 NTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQV 637
NTEKIF +M+ +GY +R +QTLIQAY+NAKAPAYGMKERMKADN+FPNK LA +L +
Sbjct: 550 NTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKA 594
Query: 638 DAFRKTAVSDLLD 650
D F+KT +SDLLD
Sbjct: 610 DPFKKTPLSDLLD 594
BLAST of Lsi03G016170 vs. ExPASy Swiss-Prot
Match:
Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)
HSP 1 Score: 530.8 bits (1366), Expect = 2.2e-149
Identity = 279/559 (49.91%), Postives = 394/559 (70.48%), Query Frame = 0
Query: 93 YISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDN--EGELTSESEI 152
+ H LSS A ++ G E E+ SE +E +P + + DD+ E EL S
Sbjct: 65 FFGIHKLSSIADAKDKGDEVVREEELSESEEAVPVSGDVPEGVVDDDSLFEPELGS---- 124
Query: 153 DDDDVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKE 212
D+DD L++ E ++ K + KR SEL+++I + SV VL+KWV EGK+
Sbjct: 125 DNDD--------LEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKD 184
Query: 213 INRAEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAES 272
+++AE++LA+ NLR+R+ + LQ EWL A+ Q EF E +YAS+LDL+AKV L KAE
Sbjct: 185 LSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEI 244
Query: 273 YIAKIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRL 332
++ IP+S +GE +YRTLLANCV+ ++V KAE++FNKMK+L FP + FACNQLLLLY
Sbjct: 245 FLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMH 304
Query: 333 DKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILS 392
D++KI+DVLLLME+EN+KPS TY LI++KGL+ DI GME++V+T+K EGIELD + S
Sbjct: 305 DRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQS 364
Query: 393 ILAKHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESN 452
ILAK+Y GLK++A ++KE+E + + W CR LLPLY ++ D VRRL + + N
Sbjct: 365 ILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQN 424
Query: 453 PRIEECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKEL 512
PR + C++AI AWGKLK V EAE +F+R+V+ +K Y ++++Y +NKML KG++L
Sbjct: 425 PRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDL 484
Query: 513 VKQMEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYA 572
VK+M ++G I P TW A+VKLY++AGEV KA+ L + + N+ +P+FT+YM I+++YA
Sbjct: 485 VKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMAILEEYA 544
Query: 573 RRGDVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALA 632
+RGDVHNTEK+F KM+ + Y A+L Q++T++ AY+NAK PAYGM ERMKADNVFPNK+LA
Sbjct: 545 KRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLA 604
Query: 633 GKLVQVDAFRKTAVSDLLD 650
KL QV+ F+K VS LLD
Sbjct: 605 AKLAQVNPFKKCPVSVLLD 609
BLAST of Lsi03G016170 vs. ExPASy Swiss-Prot
Match:
O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 7.0e-39
Identity = 129/479 (26.93%), Postives = 231/479 (48.23%), Query Frame = 0
Query: 175 KISTKRAPSE-LFKAIWSAPG--LSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGK 234
K STK+ E L+ ++ G + V L++++ K + + E+ + LR R ++
Sbjct: 14 KRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYP 73
Query: 235 ALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLAN 294
AL+ SE +E G + + D A LDL+AK R + E+Y +P++ + E Y +LL N
Sbjct: 74 ALKLSEVMEERGMNKTVS-DQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLL-N 133
Query: 295 CVVANNV-KKAEEVFNKMKDLGFPITTFACNQLLLLY-KRLDKRKIADVLLLMEKENVKP 354
C + +KAE + NKMK+L ++ + N L+ LY K + K+ ++ ++ ENV P
Sbjct: 134 CYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMP 193
Query: 355 SLFTYKILIDAKGLSNDIIGMEQVVDTMKAEG-IELDVTILSILAKHYASGGLKDKAMAI 414
+TY + + A +NDI G+E+V++ M +G + D T S +A Y GL KA
Sbjct: 194 DSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA 253
Query: 415 LKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICE------SNPRIEECMAAIVA 474
L+E+E N++ + L+ LYG L EV R+W+ SN + +V
Sbjct: 254 LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLV- 313
Query: 475 WGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRID 534
KL ++P AE +F + + ++ YA ++ K EL ++ G +++
Sbjct: 314 --KLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLN 373
Query: 535 PLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKK-----PLFTSYMVIMDQYARRGDVHN 594
TW+ + YV++G++ +A + K + + P + +M + ++ DV+
Sbjct: 374 AKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNG 433
Query: 595 TEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQV 637
E + ++ F+ LI+ Y A M+ R+K +NV N+A L +V
Sbjct: 434 AENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEV 487
BLAST of Lsi03G016170 vs. ExPASy Swiss-Prot
Match:
Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 1.2e-38
Identity = 121/408 (29.66%), Postives = 197/408 (48.28%), Query Frame = 0
Query: 193 PGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDY 252
P S+ VLD W+ +G + +E+ + LR+ F ALQ S+W+ E E D
Sbjct: 50 PSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDV 109
Query: 253 ASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNV-KKAEEVFNKMKDL 312
A RLDLIAKV GL +AE + IP + +Y LL NC + V KAE+VF +MK+L
Sbjct: 110 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL-NCYASKKVLHKAEQVFQEMKEL 169
Query: 313 GFPITTFACNQLLLLYKRLDKRKIADVLLL-MEKENVKPSLFTYKILIDAKGLSNDIIGM 372
GF N +L LY R K + + LL ME E VKP +FT + A + +D+ GM
Sbjct: 170 GFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGM 229
Query: 373 EQVVDTMKA-EGIELDVTILSILAKHYASGGLKDKAMAILKEMED-VNSKGSQWPCRILL 432
E+ + +A +G+ LD + A Y GL +KA+ +L++ E VN++ + +L+
Sbjct: 230 EKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLM 289
Query: 433 PLYGELQMEDEVRRLWKICESNPRIEEC--MAAIVAWGKLKNVPEAEKIFDRVVKTWKKL 492
YG ++EV RLW + + ++ I A K+ ++ E EKI +
Sbjct: 290 SFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLF 349
Query: 493 SSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFL 552
+ ++ Y M+ K +E+V + D TW+ + Y AG++EKA
Sbjct: 350 DIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKW 409
Query: 553 FKVLQKNQK--KPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVA 593
+ ++ ++ +P M +D + D+ KI + G+++
Sbjct: 410 KRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 456
BLAST of Lsi03G016170 vs. ExPASy TrEMBL
Match:
A0A6J1EZV3 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440876 PE=3 SV=1)
HSP 1 Score: 1053.5 bits (2723), Expect = 3.6e-304
Identity = 543/649 (83.67%), Postives = 580/649 (89.37%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS +
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSCD 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI G A+SDRCIS ERNNLATW S+G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+D DDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELD----DDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WKICE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTW+AVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWNAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYM+I+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 618
BLAST of Lsi03G016170 vs. ExPASy TrEMBL
Match:
A0A6J1F506 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440885 PE=3 SV=1)
HSP 1 Score: 1052.7 bits (2721), Expect = 6.1e-304
Identity = 543/649 (83.67%), Postives = 579/649 (89.21%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS +
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSCD 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI G A+SDRCIS ERNNLATW S+G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+D DDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELD----DDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WK+CE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKLCEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTWDAVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN EK+FH+MRLSGYVAR S FQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNAEKMFHRMRLSGYVARFSPFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 618
BLAST of Lsi03G016170 vs. ExPASy TrEMBL
Match:
A0A6J1I524 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469986 PE=3 SV=1)
HSP 1 Score: 1049.3 bits (2712), Expect = 6.7e-303
Identity = 543/649 (83.67%), Postives = 578/649 (89.06%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS E
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSWE 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI A+SD CIS ERN+LATW +G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVASAIIPAISDGCISFERNSLATWRPSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+DDD VD GTQNELDLPE++TELAEKI KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELDDDTVDAGTQNELDLPELETELAEKIPAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPG SVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMMGMEQVVDTMKAEGIELDVHTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCRILLPLYGELQMEDEVRR+WKICE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRILLPLYGELQMEDEVRRVWKICEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTWDAVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 622
BLAST of Lsi03G016170 vs. ExPASy TrEMBL
Match:
A0A6J1I2N1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469987 PE=3 SV=1)
HSP 1 Score: 1042.7 bits (2695), Expect = 6.3e-301
Identity = 539/649 (83.05%), Postives = 576/649 (88.75%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS E
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSWE 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI A+SD CIS ERN+LATW +G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVASAIIPAISDGCISFERNSLATWRPSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST LE+NKAAD+NEGELTSESE+DDD VD GTQNELDLPE++TELAEKI KR
Sbjct: 121 L-ETLPSTDALEDNKAADENEGELTSESELDDDTVDAGTQNELDLPELETELAEKIPAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPG SVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGL DKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMMGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLIDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCRILLPLYGELQ+EDEVRR+WKICE+NPR++ECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRILLPLYGELQIEDEVRRVWKICEANPRMDECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTWDAVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 622
BLAST of Lsi03G016170 vs. ExPASy TrEMBL
Match:
A0A6J1I643 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469985 PE=3 SV=1)
HSP 1 Score: 1034.6 bits (2674), Expect = 1.7e-298
Identity = 528/612 (86.27%), Postives = 565/612 (92.32%), Query Frame = 0
Query: 38 RNQGYRVRTSYVFGKLEVSYSSEGNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSH 97
RNQGYR+RTSYVFG LE YS EGNI A+SD CIS ERN+LATW +G+ ISSH
Sbjct: 60 RNQGYRIRTSYVFGTLEAPYSWEGNIVASAIIPAISDGCISFERNSLATWRPSGLSISSH 119
Query: 98 GLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDD 157
GLSSQAG ENSG ED++EDGFSEL E LPST+ LE+NKAAD+NEGELTSESE+DDD VD
Sbjct: 120 GLSSQAGAENSGEEDDLEDGFSEL-ETLPSTNALEDNKAADENEGELTSESELDDDTVDG 179
Query: 158 GTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEIS 217
GTQNELDLPE++TELAEKI KRAPSELFKAIWSAPG SVPS LDKWVSEGKE++RA+IS
Sbjct: 180 GTQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWVSEGKELSRADIS 239
Query: 218 LAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPK 277
LAMLNLRRRRMFGKALQFSEWLEASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPK
Sbjct: 240 LAMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPK 299
Query: 278 SFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIAD 337
SFQGE IYRTLLANCVVANNVKKAEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIAD
Sbjct: 300 SFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIAD 359
Query: 338 VLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYA 397
VLLLMEKENVKPSLFTYKILIDAKGLSND++GMEQVVDTMKAEGIELDV LSILAKHYA
Sbjct: 360 VLLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVNTLSILAKHYA 419
Query: 398 SGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECM 457
SGGL DKA AILKEMEDV+SK S+WPCRILLPLYGELQMEDEVRR+WKICE+NPR++ECM
Sbjct: 420 SGGLIDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWKICEANPRMDECM 479
Query: 458 AAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDS 517
AAIVAWGKLKNV EAE+IFDRV+KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DS
Sbjct: 480 AAIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADS 539
Query: 518 GCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHN 577
GCRI PLTWDAVVKLYVEAGEVEKADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN
Sbjct: 540 GCRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHN 599
Query: 578 TEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVD 637
EK+FH+MRLSGYVAR SQFQ LIQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+D
Sbjct: 600 AEKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQID 659
Query: 638 AFRKTAVSDLLD 650
AFRKTAVSDLLD
Sbjct: 660 AFRKTAVSDLLD 670
BLAST of Lsi03G016170 vs. NCBI nr
Match:
XP_022933474.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1053.5 bits (2723), Expect = 7.4e-304
Identity = 543/649 (83.67%), Postives = 580/649 (89.37%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS +
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSCD 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI G A+SDRCIS ERNNLATW S+G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+D DDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELD----DDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WKICE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTW+AVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWNAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYM+I+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 618
BLAST of Lsi03G016170 vs. NCBI nr
Match:
XP_022933485.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1052.7 bits (2721), Expect = 1.3e-303
Identity = 543/649 (83.67%), Postives = 579/649 (89.21%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS +
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSCD 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI G A+SDRCIS ERNNLATW S+G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+D DDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELD----DDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WK+CE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKLCEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTWDAVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN EK+FH+MRLSGYVAR S FQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNAEKMFHRMRLSGYVARFSPFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 618
BLAST of Lsi03G016170 vs. NCBI nr
Match:
XP_023539396.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023540094.1 pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1049.7 bits (2713), Expect = 1.1e-302
Identity = 538/649 (82.90%), Postives = 578/649 (89.06%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+ TSYVF KL+ YS E
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRITTSYVFAKLQAPYSWE 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GN+ A+SDRCIS ERNNLATW S+G+ +SSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNVVASAILPAISDRCISFERNNLATWRSSGLSLSSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+DDD VDDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEHNKAADENEGELTSESELDDDTVDDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWVSEGKE++RA++SLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVSEGKELSRADVSLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WKICE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVS 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWK LSSKQYST++KVYADNKMLTKGK+LVKQM DSGCRI PLTW+AVVKLYVEAGEVE
Sbjct: 481 KTWKNLSSKQYSTLLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWNAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYM+I+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 622
BLAST of Lsi03G016170 vs. NCBI nr
Match:
XP_022971190.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1049.3 bits (2712), Expect = 1.4e-302
Identity = 543/649 (83.67%), Postives = 578/649 (89.06%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YS E
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSWE 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI A+SD CIS ERN+LATW +G+ ISSHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVASAIIPAISDGCISFERNSLATWRPSGLSISSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NEGELTSESE+DDD VD GTQNELDLPE++TELAEKI KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEGELTSESELDDDTVDAGTQNELDLPELETELAEKIPAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPG SVPS LDKWVSEGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMMGMEQVVDTMKAEGIELDVHTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCRILLPLYGELQMEDEVRR+WKICE+NPRIEECMAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRILLPLYGELQMEDEVRRVWKICEANPRIEECMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTWDAVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYMVI+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 622
BLAST of Lsi03G016170 vs. NCBI nr
Match:
KAG6596160.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1045.8 bits (2703), Expect = 1.5e-301
Identity = 541/649 (83.36%), Postives = 577/649 (88.91%), Query Frame = 0
Query: 1 MWALRRASTPLRYASLPSSKRLFFILDLSVSVPYTVLRNQGYRVRTSYVFGKLEVSYSSE 60
MWALRRASTP LRNQGYR+RTSYVFGKLE YSSE
Sbjct: 1 MWALRRASTP--------------------------LRNQGYRIRTSYVFGKLEAPYSSE 60
Query: 61 GNIAGFGTTAALSDRCISNERNNLATWPSTGIYISSHGLSSQAGTENSGVEDNVEDGFSE 120
GNI G A+SDRCIS ERNNLATW S+G+ I SHGLSSQAG ENSG ED++EDGFSE
Sbjct: 61 GNIVGSAIIPAISDRCISFERNNLATWRSSGLSIRSHGLSSQAGAENSGEEDDLEDGFSE 120
Query: 121 LDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVDDGTQNELDLPEVDTELAEKISTKR 180
L E LPST+ LE+NKAAD+NE ELTSESE+D DDGTQNELDLPEV+TEL EKIS KR
Sbjct: 121 L-ETLPSTNALEDNKAADENEVELTSESELD----DDGTQNELDLPEVETELGEKISAKR 180
Query: 181 APSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEISLAMLNLRRRRMFGKALQFSEWLE 240
APSELFKAIWSAPGLSVPS LDKWV EGKE++RA+ISLAMLNLRRRRMFGKALQFSEWLE
Sbjct: 181 APSELFKAIWSAPGLSVPSALDKWVGEGKELSRADISLAMLNLRRRRMFGKALQFSEWLE 240
Query: 241 ASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIPKSFQGETIYRTLLANCVVANNVKK 300
ASGQLEF++RDYASRLDLIAKV GLH+AE YIAKIPKSFQGE IYRTLLANCVVANNVKK
Sbjct: 241 ASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKK 300
Query: 301 AEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
AEEVFNKMKDL FPIT FACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA
Sbjct: 301 AEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDA 360
Query: 361 KGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHYASGGLKDKAMAILKEMEDVNSKGS 420
KGLSND++GMEQVVDTMKAEGIELDV LSILAKHYASGGLKDKA AILKEMEDV+SK S
Sbjct: 361 KGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGLKDKAKAILKEMEDVSSKES 420
Query: 421 QWPCRILLPLYGELQMEDEVRRLWKICESNPRIEECMAAIVAWGKLKNVPEAEKIFDRVV 480
+WPCR+LLPLYGELQMEDEVRR+WKICE+NPRIEE MAAIVAWGKLKNV EAE+IFDRV+
Sbjct: 421 RWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEESMAAIVAWGKLKNVQEAEEIFDRVL 480
Query: 481 KTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMEDSGCRIDPLTWDAVVKLYVEAGEVE 540
KTWKKLSSKQYSTM+KVYADNKMLTKGK+LVKQM DSGCRI PLTW+AVVKLYVEAGEVE
Sbjct: 481 KTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRIGPLTWNAVVKLYVEAGEVE 540
Query: 541 KADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVHNTEKIFHKMRLSGYVARLSQFQTL 600
KADSFL K +QKNQ KPLFTSYM+I+DQYARRGDVHN EK+FH+MRLSGYVAR SQFQ L
Sbjct: 541 KADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQAL 600
Query: 601 IQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQVDAFRKTAVSDLLD 650
IQAY+NAKAPAYGMKERMKADNVFPNKALAGKL Q+DAFRKTAVSDLLD
Sbjct: 601 IQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDAFRKTAVSDLLD 618
BLAST of Lsi03G016170 vs. TAIR 10
Match:
AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )
HSP 1 Score: 635.6 bits (1638), Expect = 4.5e-182
Identity = 322/556 (57.91%), Postives = 430/556 (77.34%), Query Frame = 0
Query: 94 ISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDD 153
+S+ LSS AGT++ ED++EDGFSEL+ + + + ++D++EG+L+++ E
Sbjct: 57 LSNRALSSSAGTKSDQEEDDLEDGFSELE----GSKSGQGSTSSDEDEGKLSADEE---- 116
Query: 154 DVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINR 213
+ ELDL ++T+++ K + ++ SELFK I SAPGLS+ S LDKWV EG EI R
Sbjct: 117 -----EEEELDL--IETDVSRK-TVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITR 176
Query: 214 AEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIA 273
EI+ AML LRRRRM+G+ALQ SEWLEA+ ++E ERDYASRLDL K+RGL K E+ +
Sbjct: 177 VEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQ 236
Query: 274 KIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKR 333
KIPKSF+GE +YRTLLANCV A NVKK+E VFNKMKDLGFP++ F C+Q+LLL+KR+D++
Sbjct: 237 KIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK 296
Query: 334 KIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILA 393
KIADVLLLMEKEN+KPSL TYKILID KG +NDI GMEQ+++TMK EG+ELD ++ A
Sbjct: 297 KIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTA 356
Query: 394 KHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRI 453
+HY+ GLKDKA +LKEME + + ++ + LL +Y L EDEV+R+WKICES P
Sbjct: 357 RHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF 416
Query: 454 EECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQ 513
EE +AAI A+GKL V EAE IF+++VK ++ SS YS +++VY D+KML+KGK+LVK+
Sbjct: 417 EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKR 476
Query: 514 MEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRG 573
M +SGCRI+ TWDA++KLYVEAGEVEKADS L K +++ K + S+M IMD+Y++RG
Sbjct: 477 MAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRG 536
Query: 574 DVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKL 633
DVHNTEKIF KMR +GY +RL QFQ L+QAY+NAK+PAYGM++R+KADN+FPNK++A +L
Sbjct: 537 DVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQL 596
Query: 634 VQVDAFRKTAVSDLLD 650
Q D F+KTA+SD+LD
Sbjct: 597 AQGDPFKKTAISDILD 596
BLAST of Lsi03G016170 vs. TAIR 10
Match:
AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )
HSP 1 Score: 635.6 bits (1638), Expect = 4.5e-182
Identity = 322/556 (57.91%), Postives = 430/556 (77.34%), Query Frame = 0
Query: 94 ISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDD 153
+S+ LSS AGT++ ED++EDGFSEL+ + + + ++D++EG+L+++ E
Sbjct: 57 LSNRALSSSAGTKSDQEEDDLEDGFSELE----GSKSGQGSTSSDEDEGKLSADEE---- 116
Query: 154 DVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINR 213
+ ELDL ++T+++ K + ++ SELFK I SAPGLS+ S LDKWV EG EI R
Sbjct: 117 -----EEEELDL--IETDVSRK-TVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITR 176
Query: 214 AEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIA 273
EI+ AML LRRRRM+G+ALQ SEWLEA+ ++E ERDYASRLDL K+RGL K E+ +
Sbjct: 177 VEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQ 236
Query: 274 KIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKR 333
KIPKSF+GE +YRTLLANCV A NVKK+E VFNKMKDLGFP++ F C+Q+LLL+KR+D++
Sbjct: 237 KIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK 296
Query: 334 KIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILA 393
KIADVLLLMEKEN+KPSL TYKILID KG +NDI GMEQ+++TMK EG+ELD ++ A
Sbjct: 297 KIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTA 356
Query: 394 KHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRI 453
+HY+ GLKDKA +LKEME + + ++ + LL +Y L EDEV+R+WKICES P
Sbjct: 357 RHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF 416
Query: 454 EECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQ 513
EE +AAI A+GKL V EAE IF+++VK ++ SS YS +++VY D+KML+KGK+LVK+
Sbjct: 417 EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKR 476
Query: 514 MEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRG 573
M +SGCRI+ TWDA++KLYVEAGEVEKADS L K +++ K + S+M IMD+Y++RG
Sbjct: 477 MAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRG 536
Query: 574 DVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKL 633
DVHNTEKIF KMR +GY +RL QFQ L+QAY+NAK+PAYGM++R+KADN+FPNK++A +L
Sbjct: 537 DVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQL 596
Query: 634 VQVDAFRKTAVSDLLD 650
Q D F+KTA+SD+LD
Sbjct: 597 AQGDPFKKTAISDILD 596
BLAST of Lsi03G016170 vs. TAIR 10
Match:
AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )
HSP 1 Score: 635.6 bits (1638), Expect = 4.5e-182
Identity = 322/556 (57.91%), Postives = 430/556 (77.34%), Query Frame = 0
Query: 94 ISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDD 153
+S+ LSS AGT++ ED++EDGFSEL+ + + + ++D++EG+L+++ E
Sbjct: 57 LSNRALSSSAGTKSDQEEDDLEDGFSELE----GSKSGQGSTSSDEDEGKLSADEE---- 116
Query: 154 DVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINR 213
+ ELDL ++T+++ K + ++ SELFK I SAPGLS+ S LDKWV EG EI R
Sbjct: 117 -----EEEELDL--IETDVSRK-TVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITR 176
Query: 214 AEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIA 273
EI+ AML LRRRRM+G+ALQ SEWLEA+ ++E ERDYASRLDL K+RGL K E+ +
Sbjct: 177 VEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQ 236
Query: 274 KIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKR 333
KIPKSF+GE +YRTLLANCV A NVKK+E VFNKMKDLGFP++ F C+Q+LLL+KR+D++
Sbjct: 237 KIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK 296
Query: 334 KIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILA 393
KIADVLLLMEKEN+KPSL TYKILID KG +NDI GMEQ+++TMK EG+ELD ++ A
Sbjct: 297 KIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTA 356
Query: 394 KHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRI 453
+HY+ GLKDKA +LKEME + + ++ + LL +Y L EDEV+R+WKICES P
Sbjct: 357 RHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF 416
Query: 454 EECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQ 513
EE +AAI A+GKL V EAE IF+++VK ++ SS YS +++VY D+KML+KGK+LVK+
Sbjct: 417 EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKR 476
Query: 514 MEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRG 573
M +SGCRI+ TWDA++KLYVEAGEVEKADS L K +++ K + S+M IMD+Y++RG
Sbjct: 477 MAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRG 536
Query: 574 DVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKL 633
DVHNTEKIF KMR +GY +RL QFQ L+QAY+NAK+PAYGM++R+KADN+FPNK++A +L
Sbjct: 537 DVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQL 596
Query: 634 VQVDAFRKTAVSDLLD 650
Q D F+KTA+SD+LD
Sbjct: 597 AQGDPFKKTAISDILD 596
BLAST of Lsi03G016170 vs. TAIR 10
Match:
AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 620.2 bits (1598), Expect = 1.9e-177
Identity = 333/613 (54.32%), Postives = 442/613 (72.10%), Query Frame = 0
Query: 38 RNQGYRV-RTSYVFGKLEVSYSSEGNIAGFGTTAALSDRCISNERNNLATWPSTGIYISS 97
R+Q R+ + V+ KL++ E NIA + A + D+ + R +W S+
Sbjct: 10 RSQSLRLGACNAVYSKLDIPL-GERNIA-IESNALIHDKHEALPRFYELSWSSS---TGR 69
Query: 98 HGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDNEGELTSESEIDDDDVD 157
LSS AG + +G +D++E D+ + +P E + ++D E E D+ D+
Sbjct: 70 RSLSSDAGAKTTGDDDDLE------DKNVDLATPDETSSDSEDGE-----EFSGDEGDI- 129
Query: 158 DGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKEINRAEI 217
+G + EL +PE + PSE+FKAI S GLSV S LDKWV +GK+ NR E
Sbjct: 130 EGAELELHVPE-----------SKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEF 189
Query: 218 SLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAESYIAKIP 277
AML LR+RRMFG+ALQ +EWL+ + Q E ERDYA RLDLI+KVRG +K E+YI IP
Sbjct: 190 ESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIP 249
Query: 278 KSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRLDKRKIA 337
+SF+GE +YRTLLAN V +NV+ AE VFNKMKDLGFP++TF CNQ+L+LYKR+DK+KIA
Sbjct: 250 ESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIA 309
Query: 338 DVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILSILAKHY 397
DVLLL+EKEN+KP+L TYKILID KG SNDI GMEQ+V+TMK+EG+ELD+ +++A+HY
Sbjct: 310 DVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHY 369
Query: 398 ASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESNPRIEEC 457
AS GLK+KA +LKEME + + ++ C+ LL +YG LQ EDEVRR+WKICE NPR E
Sbjct: 370 ASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEV 429
Query: 458 MAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKELVKQMED 517
+AAI+A+GK+ V +AE +F++V+K ++SS YS +++VY D+KM+++GK+LVKQM D
Sbjct: 430 LAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSD 489
Query: 518 SGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYARRGDVH 577
SGC I LTWDAV+KLYVEAGEVEKA+S L K +Q Q KPL +S+M +M +Y RRGDVH
Sbjct: 490 SGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVH 549
Query: 578 NTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALAGKLVQV 637
NTEKIF +M+ +GY +R +QTLIQAY+NAKAPAYGMKERMKADN+FPNK LA +L +
Sbjct: 550 NTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKA 594
Query: 638 DAFRKTAVSDLLD 650
D F+KT +SDLLD
Sbjct: 610 DPFKKTPLSDLLD 594
BLAST of Lsi03G016170 vs. TAIR 10
Match:
AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 530.8 bits (1366), Expect = 1.5e-150
Identity = 279/559 (49.91%), Postives = 394/559 (70.48%), Query Frame = 0
Query: 93 YISSHGLSSQAGTENSGVEDNVEDGFSELDEKLPSTSPLENNKAADDN--EGELTSESEI 152
+ H LSS A ++ G E E+ SE +E +P + + DD+ E EL S
Sbjct: 65 FFGIHKLSSIADAKDKGDEVVREEELSESEEAVPVSGDVPEGVVDDDSLFEPELGS---- 124
Query: 153 DDDDVDDGTQNELDLPEVDTELAEKISTKRAPSELFKAIWSAPGLSVPSVLDKWVSEGKE 212
D+DD L++ E ++ K + KR SEL+++I + SV VL+KWV EGK+
Sbjct: 125 DNDD--------LEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKD 184
Query: 213 INRAEISLAMLNLRRRRMFGKALQFSEWLEASGQLEFIERDYASRLDLIAKVRGLHKAES 272
+++AE++LA+ NLR+R+ + LQ EWL A+ Q EF E +YAS+LDL+AKV L KAE
Sbjct: 185 LSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEI 244
Query: 273 YIAKIPKSFQGETIYRTLLANCVVANNVKKAEEVFNKMKDLGFPITTFACNQLLLLYKRL 332
++ IP+S +GE +YRTLLANCV+ ++V KAE++FNKMK+L FP + FACNQLLLLY
Sbjct: 245 FLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMH 304
Query: 333 DKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDIIGMEQVVDTMKAEGIELDVTILS 392
D++KI+DVLLLME+EN+KPS TY LI++KGL+ DI GME++V+T+K EGIELD + S
Sbjct: 305 DRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQS 364
Query: 393 ILAKHYASGGLKDKAMAILKEMEDVNSKGSQWPCRILLPLYGELQMEDEVRRLWKICESN 452
ILAK+Y GLK++A ++KE+E + + W CR LLPLY ++ D VRRL + + N
Sbjct: 365 ILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQN 424
Query: 453 PRIEECMAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSSKQYSTMVKVYADNKMLTKGKEL 512
PR + C++AI AWGKLK V EAE +F+R+V+ +K Y ++++Y +NKML KG++L
Sbjct: 425 PRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDL 484
Query: 513 VKQMEDSGCRIDPLTWDAVVKLYVEAGEVEKADSFLFKVLQKNQKKPLFTSYMVIMDQYA 572
VK+M ++G I P TW A+VKLY++AGEV KA+ L + + N+ +P+FT+YM I+++YA
Sbjct: 485 VKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMAILEEYA 544
Query: 573 RRGDVHNTEKIFHKMRLSGYVARLSQFQTLIQAYLNAKAPAYGMKERMKADNVFPNKALA 632
+RGDVHNTEK+F KM+ + Y A+L Q++T++ AY+NAK PAYGM ERMKADNVFPNK+LA
Sbjct: 545 KRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLA 604
Query: 633 GKLVQVDAFRKTAVSDLLD 650
KL QV+ F+K VS LLD
Sbjct: 605 AKLAQVNPFKKCPVSVLLD 609
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9C977 | 6.3e-181 | 57.91 | Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop... | [more] |
Q9XI21 | 2.7e-176 | 54.32 | Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop... | [more] |
Q9LRP6 | 2.2e-149 | 49.91 | Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop... | [more] |
O22714 | 7.0e-39 | 26.93 | Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... | [more] |
Q9SKU6 | 1.2e-38 | 29.66 | Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EZV3 | 3.6e-304 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... | [more] |
A0A6J1F506 | 6.1e-304 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... | [more] |
A0A6J1I524 | 6.7e-303 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... | [more] |
A0A6J1I2N1 | 6.3e-301 | 83.05 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... | [more] |
A0A6J1I643 | 1.7e-298 | 86.27 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
XP_022933474.1 | 7.4e-304 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur... | [more] |
XP_022933485.1 | 1.3e-303 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur... | [more] |
XP_023539396.1 | 1.1e-302 | 82.90 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor... | [more] |
XP_022971190.1 | 1.4e-302 | 83.67 | pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur... | [more] |
KAG6596160.1 | 1.5e-301 | 83.36 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |