Lsi03G014850 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G014850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribonuclease T(2)
Location	chr03: 25888904 .. 25890924 (+)
RNA-Seq Expression	Lsi03G014850
Synteny	Lsi03G014850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAACAATCATTTTCATTTGGCTAATTCCAAACGTTGTGAACAAATTAAACCCATCATGGCTAAAGCTCTGTTAGTGATCTCCATATTCAGCTTGGCTCTATTGATGTTCTGTGTGAGGGCTCAATATGATTACTTTCAAATGGTTCAACAATGGCCTCCGGCTACATGTAGCGGCCTCGGAGTTACATGTCGTGGTCAACCTCCAGCTATGTTCACAATTCATGGTTTGTGGCCAAGCAATTACTCGACTGTCCATCTTGTTTGTACGGGACTTCCATTTAGTTCAACTCAGGTTCTTACCTCTCGCTAATAGATCTCTAAATTTTCATTTTTTCTTGTTTAATAATACGTCTCCAAATTTTAAGAGTATTTAATAAGTCTCTAAACATATATTCATGAAATATTCGATATTTTATTTAAAATTAGTATATATAATTCACATAAATTCGAATGTTATGTATAATATATAATTATGTATAGAATGAAAGTACACCAAGTTAAGCTTCATCATTTGTTATATATATATTTAAAACGGCTGCATCATTAGGCTAGAATGACCTAAAAAATTAAACATACATACTCGCCCCGATCCTGCAGGCTTCAAGTATTTAGTGTAATTAGTGCTATATAAGTCTTTTGAATATCGCTAGTTTAGATCAGGCTTGGCCAACTCATTCTCCCATACTGAGATATATATAGCCAAATCCATGGGCTTTATACAATAGGCCAATTTGATGGGACTTGGTTTGACCCTTTGAGTAATTTATTTATTTTTAATATTTTTCTCAAACCATGTTTTTAAGTTTTAATTAGATCATCCATGGTCCTAGCCATCTGCCACCTGTTTTTTTTTTTTTTTTCATAACCTAAAATCTAAAGTTCTAATATGTTGAGTTTAAAAAGTCAAAAATAAAAAATACAAGTAAAACTTTAAAGATTAAAAATATATTTTTTTTTTTAAGAAAAAGGCTTAAGTCAAAGACTTGATAGAAACAAAAGTTGAAATTTAGTGACCAATTAAAAAAAAATTGAAAGTTTAAGAAGATGATATTAGAAAAATGGAAATTCTAAAGACCTACTAAACACAAAATTAAAAGTAATAAAAACCTATTAGATAAACGTGATAGTTCATGTAATAAACTTGTAATAATTAAATTAATCTTTTCCTAGGCTAAATTTTTTTTACGAATAATATCACATAATATTCATAAAATACAAAACAAAGTACTTAAGAGTAATTGTCGTTGTCTTTTTAAGACAATTTTATTTGTCTTTCAAGATAAAATAGAGTACATACAATTTTTATAGAAACAACACTCTGTCTACGAGATCCAACGAACTCAAATTTATAGAATAAATCGAACTTTAAAGACCTCTACATTAGGCAACATTAAATAACTCTTAATTTTGTTTTAGATTGCAGCAATAAGACCTCAACTAAACACATATTGGCCAGATGTGATTCGAAGAAACAACCAAAGGTTTTGGCAGCACGAATGGGATGACCATGGAACATGCTCGGATCCCCCTTTCAACCAACTTCAATATTTCCAAACAAGTTTGAACATTCGCACGAACCCCAACTACAATCTCCTCGCCATCTTGAACGCTGCTGGGCTTGGCCCGACCACGACTACAGTCAGGCAATACCGAGACATCGAAAGTGCCATTCAAGCTGCGACCGGAAAGATTCCAGGTCTACGCTGCAACAGTAATGCCCTAACAGGACGTCGCCAACTATTTGAAATCATTTTGTGTTTTGACAAAAATGGTGTCACTCTCATTGATTGTACTCACTATGCTGGCATCACCTGTCCTTCACAGTTTGTGTGGCTCCATCGACAGCCTTGGAGTTTGGTCGCTGTTGTTGAGGAGCTTAAGGATTCTTTGGTCTATGCGGCTTCTATTCCCAAGTTTCTGTTTCTTTCTACTGTTCCTCTTTCCATTGTCTTTGTGTTTTGGAAGAAATTTTATCAAACACGTAGAGGTGTTATTAGAGGTGGTGGGAAGCAGGAATAA

mRNA sequence

CCTAACAATCATTTTCATTTGGCTAATTCCAAACGTTGTGAACAAATTAAACCCATCATGGCTAAAGCTCTGTTAGTGATCTCCATATTCAGCTTGGCTCTATTGATGTTCTGTGTGAGGGCTCAATATGATTACTTTCAAATGGTTCAACAATGGCCTCCGGCTACATGTAGCGGCCTCGGAGTTACATGTCGTGGTCAACCTCCAGCTATGTTCACAATTCATGATGTGATTCGAAGAAACAACCAAAGGTTTTGGCAGCACGAATGGGATGACCATGGAACATGCTCGGATCCCCCTTTCAACCAACTTCAATATTTCCAAACAAGTTTGAACATTCGCACGAACCCCAACTACAATCTCCTCGCCATCTTGAACGCTGCTGGGCTTGGCCCGACCACGACTACAGTCAGGCAATACCGAGACATCGAAAGTGCCATTCAAGCTGCGACCGGAAAGATTCCAGGTCTACGCTGCAACAGTAATGCCCTAACAGGACGTCGCCAACTATTTGAAATCATTTTGTGTTTTGACAAAAATGGTGTCACTCTCATTGATTGTACTCACTATGCTGGCATCACCTGTCCTTCACAGTTTGTGTGGCTCCATCGACAGCCTTGGAGTTTGGTCGCTGTTGTTGAGGAGCTTAAGGATTCTTTGGTCTATGCGGCTTCTATTCCCAAGTTTCTGTTTCTTTCTACTGTTCCTCTTTCCATTGTCTTTGTGTTTTGGAAGAAATTTTATCAAACACGTAGAGGTGTTATTAGAGGTGGTGGGAAGCAGGAATAA

Coding sequence (CDS)

CCTAACAATCATTTTCATTTGGCTAATTCCAAACGTTGTGAACAAATTAAACCCATCATGGCTAAAGCTCTGTTAGTGATCTCCATATTCAGCTTGGCTCTATTGATGTTCTGTGTGAGGGCTCAATATGATTACTTTCAAATGGTTCAACAATGGCCTCCGGCTACATGTAGCGGCCTCGGAGTTACATGTCGTGGTCAACCTCCAGCTATGTTCACAATTCATGATGTGATTCGAAGAAACAACCAAAGGTTTTGGCAGCACGAATGGGATGACCATGGAACATGCTCGGATCCCCCTTTCAACCAACTTCAATATTTCCAAACAAGTTTGAACATTCGCACGAACCCCAACTACAATCTCCTCGCCATCTTGAACGCTGCTGGGCTTGGCCCGACCACGACTACAGTCAGGCAATACCGAGACATCGAAAGTGCCATTCAAGCTGCGACCGGAAAGATTCCAGGTCTACGCTGCAACAGTAATGCCCTAACAGGACGTCGCCAACTATTTGAAATCATTTTGTGTTTTGACAAAAATGGTGTCACTCTCATTGATTGTACTCACTATGCTGGCATCACCTGTCCTTCACAGTTTGTGTGGCTCCATCGACAGCCTTGGAGTTTGGTCGCTGTTGTTGAGGAGCTTAAGGATTCTTTGGTCTATGCGGCTTCTATTCCCAAGTTTCTGTTTCTTTCTACTGTTCCTCTTTCCATTGTCTTTGTGTTTTGGAAGAAATTTTATCAAACACGTAGAGGTGTTATTAGAGGTGGTGGGAAGCAGGAATAA

Protein sequence

PNNHFHLANSKRCEQIKPIMAKALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIHDVIRRNNQRFWQHEWDDHGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALTGRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYAASIPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE

Homology

[Close]

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 0


Query: 43  YDYFQMVQQWPPATCS-GLGVTCRGQPPAMFTIH-------------------------- 102
           +D F  VQQWPPA CS     +C G     FTIH                          
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 103 -----------DVIRRNNQRFWQHEWDDHGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAI 162
                      +V+R NNQ+FW HEW  HGTCS+  FNQ  YF+ ++++R   NY+++  
Sbjct: 61  HLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRN--NYDIIGA 120

Query: 163 LNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALTGRRQLFEIILCFDKNGVTL 202
           L     GP   T +  + I+  ++A  GK PGLRC ++  T    L +++ CF ++G TL
Sbjct: 121 LRPHAAGPNGRT-KSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTL 180

[Close]

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 67/210 (31.90%), Postives = 91/210 (43.33%), Query Frame = 0


Query: 22  KALLVISIFSLALLMFCVRAQ-YDYFQMVQQWPPATCSGLGVTC---RGQPPAMFTIH-- 81
           K LL+  I    LL+ CV +Q +D+F  VQQWP + C      C    G+P   F+IH  
Sbjct: 6   KKLLIKIIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGL 65

Query: 82  -------------------------DVI-------------RRNNQRFWQHEWDDHGTCS 141
                                    D+I               +  +FW HEW  HGTCS
Sbjct: 66  WPNYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCS 125

Query: 142 DPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGL 188
               NQ  YFQT+L+ +T    NLL  LN AG+ P          I+ AI+   G  P +
Sbjct: 126 --ALNQHAYFQTALDFKTKS--NLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFI 185

[Close]

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 62/226 (27.43%), Postives = 102/226 (45.13%), Query Frame = 0


Query: 19  IMAKALLVISIFSLALLMFCVRA---QYDYFQMVQQWPPATCSGLGVTC---RGQPPAMF 78
           I+  +L +IS+  +   +F   +    +D+F  VQQWP + C      C    G+P A F
Sbjct: 3   ILLASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADF 62

Query: 79  TIH---------------------------DVIRR-------------NNQRFWQHEWDD 138
            IH                           D++               + + FW+HEW+ 
Sbjct: 63  GIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEK 122

Query: 139 HGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATG 198
           HGTCS+   +Q +YFQT+LN++     NLL  L  AG+ P   +      I  +I+ + G
Sbjct: 123 HGTCSESVIDQHEYFQTALNLKQKT--NLLGALTKAGINPDGKSY-SLESIRDSIKESIG 182

[Close]

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16
Identity = 59/215 (27.44%), Postives = 96/215 (44.65%), Query Frame = 0


Query: 25  LVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTC---RGQPPAMFTIHDVIRRN 84
           L++ I +  L +      +D+F  VQQWP + C      C    G+P A F IH +   N
Sbjct: 11  LILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNN 70

Query: 85  N----------------------------------------QRFWQHEWDDHGTCSDPPF 144
           N                                          FW HEW+ HGTC++   
Sbjct: 71  NDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVL 130

Query: 145 -NQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCN 196
            NQ  YF+ +L+++     +LL+IL  A + P   +     +I +AI++A G  P ++CN
Sbjct: 131 TNQHAYFKKALDLKN--QIDLLSILQGADIHPDGESY-DLVNIRNAIKSAIGYTPWIQCN 190

[Close]

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.5e-16
Identity = 60/205 (29.27%), Postives = 88/205 (42.93%), Query Frame = 0


Query: 29  IFSLALLMFCVRA---QYDYFQMVQQWPPATCSGLGVTC---RGQPPAMFTIH------- 88
           IF LAL    V++    +D+F  V QWP A C      C    G+P A F IH       
Sbjct: 5   IFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYK 64

Query: 89  --------------DVIR-------------------RNNQRFWQHEWDDHGTCSDPPFN 148
                         D +R                    +  +FW HEW+ HGTC++   +
Sbjct: 65  TGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELD 124

Query: 149 QLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSN 188
           Q  YF+  L ++     NLL  L  AG+ P      + +DIE+ I+   G  PG+ CN +
Sbjct: 125 QHDYFEAGLKLKQKA--NLLHALTNAGIKP-DDKFYEMKDIENTIKQVVGFAPGIECNKD 184

[Close]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL
Match: A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.4e-89
Identity = 177/279 (63.44%), Postives = 196/279 (70.25%), Query Frame = 0


Query: 20  MAKALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH---- 79
           MA+A  ++SIF   LL  CV+AQ+DYFQMVQQWPPATCS  GV C   PPAMFTIH    
Sbjct: 1   MAQAPFIVSIFKFVLLTSCVKAQFDYFQMVQQWPPATCS--GVRCYANPPAMFTIHGLWP 60

Query: 80  --------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQ 139
                                           DVI  NNQRFW+HEWD HGTCSDPPFNQ
Sbjct: 61  SNYSNVPLVCAGQPFNPAQIATLVPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQ 120

Query: 140 LQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNA 199
           LQYFQT+LNIRTN NY+LLAILN AGLGPT T  RQY  IE AIQAATGK PGLRCN NA
Sbjct: 121 LQYFQTTLNIRTNHNYDLLAILNTAGLGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNA 180

Query: 200 LTGRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYA 259
            + ++QLFEIILCFDKNGVTLIDCT +AGITCPSQFVWLHR P SLV+ V ELK+SLV+ 
Sbjct: 181 QSKKKQLFEIILCFDKNGVTLIDCTQFAGITCPSQFVWLHRPPLSLVSAVGELKNSLVHQ 240

Query: 260 ASIPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
            SI KFLFL  + LS+  +F K+FY TR    RGGGKQE
Sbjct: 241 VSILKFLFL-CILLSVTIMFRKRFYGTR----RGGGKQE 272

[Close]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL
Match: A0A6J1IAR7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.9e-89
Identity = 179/277 (64.62%), Postives = 198/277 (71.48%), Query Frame = 0


Query: 22  KALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH------ 81
           KA  ++SIF+L LL   V+AQ+DYFQMVQQWPPATCS  GV C   PPAMFTIH      
Sbjct: 4   KAPFIVSIFNLVLLTIGVKAQFDYFQMVQQWPPATCS--GVRCYANPPAMFTIHGLWPST 63

Query: 82  ------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQLQ 141
                                         DVI  NNQRFW+HEWD+HGTCSDPPFNQLQ
Sbjct: 64  YSNVPPVCAGQPFDRAQIATLEPQLNTYWPDVINGNNQRFWKHEWDNHGTCSDPPFNQLQ 123

Query: 142 YFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALT 201
           YFQT+LNIRTN NY+LLAILN AGLGPT TT RQY+ IE AIQAATGK PGLRCN NA +
Sbjct: 124 YFQTTLNIRTNHNYDLLAILNTAGLGPTATTTRQYQAIEGAIQAATGKKPGLRCNKNAQS 183

Query: 202 GRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYAAS 261
            R+QLFEIILCFDKNGVTLI+CT +AGITCPSQFVWL RQP SLV+ V ELK+SLV   S
Sbjct: 184 KRKQLFEIILCFDKNGVTLINCTQFAGITCPSQFVWLDRQPLSLVSAVGELKNSLVPHVS 243

Query: 262 IPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
           I KFLFL  + LSI  +F K+FY TRRG   GGGKQE
Sbjct: 244 ILKFLFL-CILLSITILFRKRFYGTRRGG-SGGGKQE 276

[Close]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL
Match: A0A6J1F837 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.7e-68
Identity = 135/236 (57.20%), Postives = 161/236 (68.22%), Query Frame = 0


Query: 20  MAKALLVISIFS--LALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH-- 79
           MAK+  ++SIF+    +L+ CV AQ+DYFQMVQQWPPA CS + V C  QPP MFTIH  
Sbjct: 1   MAKSPSIVSIFNFVFVVLILCVNAQFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGL 60

Query: 80  ----------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPF 139
                                             DVI+  NQ+FWQHEWD HG CS+PPF
Sbjct: 61  WPSNYSNARLVCAPQPFNPTQIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPF 120

Query: 140 NQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNS 199
           NQLQYFQ +LNIRTN +Y+LL ILNAAGLGP+ T +R+Y+DIE AIQAATGK PGLRCN 
Sbjct: 121 NQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNI 180

Query: 200 NALT-GRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEEL 217
           NA +  ++QL EIILCFDK+G+TLIDCT +AGITCP QFVW  RQP +LV+   EL
Sbjct: 181 NAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITCPPQFVWPDRQPLNLVSTDGEL 236

[Close]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL
Match: A0A6J1E145 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024988 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55
Identity = 134/274 (48.91%), Postives = 157/274 (57.30%), Query Frame = 0


Query: 24  LLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH-------- 83
           LL   IF+++L+       YDYF MVQQW P+TC+   V C  QP  MFTIH        
Sbjct: 7   LLFKLIFTISLVSSIGVEGYDYFLMVQQWGPSTCA--CVRCYAQPLPMFTIHGLWPGNNN 66

Query: 84  -------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQL 143
                                          +V   N+Q FW +EW  HG CSDPPFNQ 
Sbjct: 67  SPHPLINCSGTPFKPTQIPTAQRQQLLTYWPNVEDGNHQWFWGNEWLKHGKCSDPPFNQT 126

Query: 144 QYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNAL 203
            YFQT+LNIRTN NY+LLAILNAAGLGPT T  R Y  IE AI AAT + P LRC+ NA 
Sbjct: 127 AYFQTALNIRTNHNYDLLAILNAAGLGPTGTGFRNYTAIEGAIHAATNRTPFLRCDVNAH 186

Query: 204 TGRRQLFEIILCFDKNGVTLIDC----THYAGITCPSQFVWLHRQPWSLVAVVEELKDSL 253
           T R QL+EI+LCFD+NGVTLI+C    T      CP+QFVWL R P SL     ELKDSL
Sbjct: 187 TRRYQLYEIVLCFDRNGVTLINCNRNNTRALRKRCPNQFVWLTRNPLSLGVAFWELKDSL 246

[Close]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL
Match: A0A6J1DYQ5 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024276 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 5.1e-52
Identity = 126/281 (44.84%), Postives = 156/281 (55.52%), Query Frame = 0


Query: 20  MAKALLVISIFSLALLMFCVRAQ-YDYFQMVQQWPPATCSGLGVTCRGQPP-AMFTIH-- 79
           MAKAL ++ +F   + MF + A+ YDYF MVQQW P  C+G+ VTC G PP   FTIH  
Sbjct: 1   MAKALFLLLVF---VFMFFMGAKGYDYFLMVQQWGPNKCTGVNVTCHGTPPLPTFTIHGL 60

Query: 80  -------------------------------------DVIRRNNQRFWQHEWDDHGTCSD 139
                                                DV    NQ FWQHEW+ HG CS 
Sbjct: 61  WPGINNSPRPLINCPGPPFDPAQITASQRQQLDTYWPDVQNWRNQSFWQHEWETHGKCSY 120

Query: 140 PPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLR 199
           P F Q  Y + +L+IR N NY+LLAI++       T  +  Y  IE+AIQAAT + P LR
Sbjct: 121 PNFRQTAYLEAALDIRRNHNYDLLAIIH-----NPTGMIHNYNAIEAAIQAATNRTPFLR 180

Query: 200 CNSNALTGRRQLFEIILCFDKNGVTLIDC----THYAGITCPSQFVWLHRQPWSLVAVVE 254
           CN NA TGR QLFEI+LCFD+NGVTLIDC    T    + CP QFVWL R P SL   + 
Sbjct: 181 CNVNAHTGRHQLFEIVLCFDRNGVTLIDCNQNNTRALHMQCPHQFVWLPRHPPSLGVAIG 240

[Close]

BLAST of Lsi03G014850 vs. NCBI nr
Match: XP_038906187.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112
Identity = 210/279 (75.27%), Postives = 221/279 (79.21%), Query Frame = 0


Query: 20  MAKALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH---- 79
           MAKALLVISIFSLALL+F V+AQYDYFQMVQQWPPATCSG+GV CR QPP+MFTIH    
Sbjct: 1   MAKALLVISIFSLALLVFSVKAQYDYFQMVQQWPPATCSGVGVRCRAQPPSMFTIHGLWP 60

Query: 80  --------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQ 139
                                           DVIR NNQRFWQHEWD HGTCSDPPFNQ
Sbjct: 61  SNYSTAHLVCTGLPFDPTQIAAIRPQLNTYWPDVIRGNNQRFWQHEWDAHGTCSDPPFNQ 120

Query: 140 LQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNA 199
            QYFQT+LNIR N NY+LLAILNAAGLGPT T VRQY+ IE+AIQAATGKIPGLRCN+NA
Sbjct: 121 RQYFQTTLNIRMNHNYDLLAILNAAGLGPTATMVRQYQAIENAIQAATGKIPGLRCNTNA 180

Query: 200 LTGRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYA 259
            TG RQLFEIILCFDKNGVTLIDCT +AGITCP QFVWLHRQPWSL  VVEELKDSLVY 
Sbjct: 181 QTGSRQLFEIILCFDKNGVTLIDCTPFAGITCPLQFVWLHRQPWSLGVVVEELKDSLVYE 240

Query: 260 ASIPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
            SIPKFLFLST+PLSI FVFWKKFYQT RGV RGGGKQE
Sbjct: 241 GSIPKFLFLSTIPLSIAFVFWKKFYQTTRGV-RGGGKQE 278

[Close]

BLAST of Lsi03G014850 vs. NCBI nr
Match: XP_023514499.1 (ribonuclease MC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.1 bits (884), Expect = 5.2e-91
Identity = 181/275 (65.82%), Postives = 199/275 (72.36%), Query Frame = 0


Query: 20  MAKALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH---- 79
           M KA  ++SIF+LALL  CV+AQ+DYFQMVQQWPPATCS  GV C   PPAMFTIH    
Sbjct: 1   MGKAPFIVSIFNLALLTLCVKAQFDYFQMVQQWPPATCS--GVRCYANPPAMFTIHGLWP 60

Query: 80  ----------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQLQYF 139
                                       DVI  NNQRFW+HEWD HGTCSDPPFNQLQYF
Sbjct: 61  SNYSNVPLICTGQPFNPTLVPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYF 120

Query: 140 QTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALTGR 199
           QT+LNIRTN NY+LLAILN AGLGPT T  RQY  IE AIQAATGK PGLRCN NA + +
Sbjct: 121 QTTLNIRTNHNYDLLAILNTAGLGPTGTNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKK 180

Query: 200 RQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYAASIP 259
           +QLFEIILCFDKNGVTLIDCT +AGITCPSQFVWL RQP SLV+ V ELK+SLV+  SI 
Sbjct: 181 KQLFEIILCFDKNGVTLIDCTQFAGITCPSQFVWLDRQPLSLVSAVGELKNSLVHRVSIL 240

Query: 260 KFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
           KFLFL  + LSI  +F K+FY TRRG   GGGKQE
Sbjct: 241 KFLFL-CILLSITIMFGKRFYGTRRGG-SGGGKQE 271

[Close]

BLAST of Lsi03G014850 vs. NCBI nr
Match: XP_022932791.1 (ribonuclease MC-like [Cucurbita moschata])

HSP 1 Score: 338.6 bits (867), Expect = 4.9e-89
Identity = 177/279 (63.44%), Postives = 196/279 (70.25%), Query Frame = 0


Query: 20  MAKALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH---- 79
           MA+A  ++SIF   LL  CV+AQ+DYFQMVQQWPPATCS  GV C   PPAMFTIH    
Sbjct: 1   MAQAPFIVSIFKFVLLTSCVKAQFDYFQMVQQWPPATCS--GVRCYANPPAMFTIHGLWP 60

Query: 80  --------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQ 139
                                           DVI  NNQRFW+HEWD HGTCSDPPFNQ
Sbjct: 61  SNYSNVPLVCAGQPFNPAQIATLVPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQ 120

Query: 140 LQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNA 199
           LQYFQT+LNIRTN NY+LLAILN AGLGPT T  RQY  IE AIQAATGK PGLRCN NA
Sbjct: 121 LQYFQTTLNIRTNHNYDLLAILNTAGLGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNA 180

Query: 200 LTGRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYA 259
            + ++QLFEIILCFDKNGVTLIDCT +AGITCPSQFVWLHR P SLV+ V ELK+SLV+ 
Sbjct: 181 QSKKKQLFEIILCFDKNGVTLIDCTQFAGITCPSQFVWLHRPPLSLVSAVGELKNSLVHQ 240

Query: 260 ASIPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
            SI KFLFL  + LS+  +F K+FY TR    RGGGKQE
Sbjct: 241 VSILKFLFL-CILLSVTIMFRKRFYGTR----RGGGKQE 272

[Close]

BLAST of Lsi03G014850 vs. NCBI nr
Match: XP_022974221.1 (ribonuclease MC-like [Cucurbita maxima])

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-88
Identity = 179/277 (64.62%), Postives = 198/277 (71.48%), Query Frame = 0


Query: 22  KALLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTCRGQPPAMFTIH------ 81
           KA  ++SIF+L LL   V+AQ+DYFQMVQQWPPATCS  GV C   PPAMFTIH      
Sbjct: 4   KAPFIVSIFNLVLLTIGVKAQFDYFQMVQQWPPATCS--GVRCYANPPAMFTIHGLWPST 63

Query: 82  ------------------------------DVIRRNNQRFWQHEWDDHGTCSDPPFNQLQ 141
                                         DVI  NNQRFW+HEWD+HGTCSDPPFNQLQ
Sbjct: 64  YSNVPPVCAGQPFDRAQIATLEPQLNTYWPDVINGNNQRFWKHEWDNHGTCSDPPFNQLQ 123

Query: 142 YFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALT 201
           YFQT+LNIRTN NY+LLAILN AGLGPT TT RQY+ IE AIQAATGK PGLRCN NA +
Sbjct: 124 YFQTTLNIRTNHNYDLLAILNTAGLGPTATTTRQYQAIEGAIQAATGKKPGLRCNKNAQS 183

Query: 202 GRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQFVWLHRQPWSLVAVVEELKDSLVYAAS 261
            R+QLFEIILCFDKNGVTLI+CT +AGITCPSQFVWL RQP SLV+ V ELK+SLV   S
Sbjct: 184 KRKQLFEIILCFDKNGVTLINCTQFAGITCPSQFVWLDRQPLSLVSAVGELKNSLVPHVS 243

Query: 262 IPKFLFLSTVPLSIVFVFWKKFYQTRRGVIRGGGKQE 263
           I KFLFL  + LSI  +F K+FY TRRG   GGGKQE
Sbjct: 244 ILKFLFL-CILLSITILFRKRFYGTRRGG-SGGGKQE 276

[Close]

BLAST of Lsi03G014850 vs. NCBI nr
Match: KAG6581688.1 (hypothetical protein SDJN03_21690, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.7 bits (779), Expect = 7.8e-79
Identity = 162/251 (64.54%), Postives = 175/251 (69.72%), Query Frame = 0


Query: 48  MVQQWPPATCSGLGVTCRGQPPAMFTIH-------------------------------- 107
           MVQQWPPATCS  GV C   P AMFTIH                                
Sbjct: 1   MVQQWPPATCS--GVRCYANPSAMFTIHGLWPSNYSNIPLVCAGQPFNRAQIATLVPQLN 60

Query: 108 ----DVIRRNNQRFWQHEWDDHGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLG 167
               DVI  NNQRFW+HEWD HGTCSDPPFNQLQYFQT+LNIRTN NY+LLAILN AGLG
Sbjct: 61  TYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILNTAGLG 120

Query: 168 PTTTTVRQYRDIESAIQAATGKIPGLRCNSNALTGRRQLFEIILCFDKNGVTLIDCTHYA 227
           PT T  RQY  IE AIQAATGK PGLRCN NA + ++QLFEIILCFDKNGVTLIDCT +A
Sbjct: 121 PTGTNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKKKQLFEIILCFDKNGVTLIDCTQFA 180

Query: 228 GITCPSQFVWLHRQPWSLVAVVEELKDSLVYAASIPKFLFLSTVPLSIVFVFWKKFYQTR 263
           GITCPSQFVWL RQP SLV+ V ELK+SLV+  SI KFLFL  + LSI  +F K+FY TR
Sbjct: 181 GITCPSQFVWLDRQPLSLVSAVGELKNSLVHQVSILKFLFL-CILLSITIMFRKRFYGTR 240

[Close]

BLAST of Lsi03G014850 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-19
Identity = 62/226 (27.43%), Postives = 102/226 (45.13%), Query Frame = 0


Query: 19  IMAKALLVISIFSLALLMFCVRA---QYDYFQMVQQWPPATCSGLGVTC---RGQPPAMF 78
           I+  +L +IS+  +   +F   +    +D+F  VQQWP + C      C    G+P A F
Sbjct: 3   ILLASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADF 62

Query: 79  TIH---------------------------DVIRR-------------NNQRFWQHEWDD 138
            IH                           D++               + + FW+HEW+ 
Sbjct: 63  GIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEK 122

Query: 139 HGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATG 198
           HGTCS+   +Q +YFQT+LN++     NLL  L  AG+ P   +      I  +I+ + G
Sbjct: 123 HGTCSESVIDQHEYFQTALNLKQKT--NLLGALTKAGINPDGKSY-SLESIRDSIKESIG 182

[Close]

BLAST of Lsi03G014850 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 85.9 bits (211), Expect = 5.3e-17
Identity = 60/205 (29.27%), Postives = 88/205 (42.93%), Query Frame = 0


Query: 29  IFSLALLMFCVRA---QYDYFQMVQQWPPATCSGLGVTC---RGQPPAMFTIH------- 88
           IF LAL    V++    +D+F  V QWP A C      C    G+P A F IH       
Sbjct: 5   IFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYK 64

Query: 89  --------------DVIR-------------------RNNQRFWQHEWDDHGTCSDPPFN 148
                         D +R                    +  +FW HEW+ HGTC++   +
Sbjct: 65  TGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELD 124

Query: 149 QLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSN 188
           Q  YF+  L ++     NLL  L  AG+ P      + +DIE+ I+   G  PG+ CN +
Sbjct: 125 QHDYFEAGLKLKQKA--NLLHALTNAGIKP-DDKFYEMKDIENTIKQVVGFAPGIECNKD 184

[Close]

BLAST of Lsi03G014850 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-17
Identity = 61/218 (27.98%), Postives = 93/218 (42.66%), Query Frame = 0


Query: 24  LLVISIFSLALLMFCVRAQYDYFQMVQQWPPATCSGLGVTC---RGQPPAMFTIHDV--- 83
           LL + +F   L +   +  +D+F  V QWP A C      C    G+P A F IH +   
Sbjct: 10  LLKLLVFQ-GLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWPN 69

Query: 84  ---------------------------IRRN----------NQRFWQHEWDDHGTCSDPP 143
                                      +++N             FW+HEW+ HGTCS+  
Sbjct: 70  YNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESV 129

Query: 144 FNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCN 199
            +Q +YF+ +L ++     NLL IL  +G+ P        + I +AI+   G  PG+ CN
Sbjct: 130 MDQHEYFENALKLKQKA--NLLQILKNSGINPDDGFYNLDK-ITNAIKDGIGFTPGIECN 189

[Close]

BLAST of Lsi03G014850 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 78.6 bits (192), Expect = 8.5e-15
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 81  NNQRFWQHEWDDHGTCSDPPFNQLQYFQTSLNIRTNPNYNLLAILNAAGLGPTTTTVRQY 140
           N    W+HEW+ HGTC    F+Q  YF+T  N++     +LL IL   G+ P        
Sbjct: 109 NETNLWEHEWNKHGTCVQSIFDQHSYFRT--NLKFKHKVHLLNILIQKGIKP-NDGFYSL 168

Query: 141 RDIESAIQAATGKIPGLRCNSNALTGRRQLFEIILCFDKNGVTLIDCTHYAGITCPSQ 199
            +I++AI+ A G  PG+ CN + + G +QLF+I +C D      ++C +    +C S+
Sbjct: 169 DEIKNAIKCAIGFAPGIECNED-VKGNKQLFQIYICLDNYAKEFVECPYVPDKSCASK 222

[Close]

BLAST of Lsi03G014850 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 51/191 (26.70%), Postives = 71/191 (37.17%), Query Frame = 0


Query: 42  QYDYFQMVQQWPPATCSGL------GVTCRG-QPPAMFTIHDVIRRNNQ----------- 101
           ++DYF +  QWP   C G          CRG   P  FTIH +    N            
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSD 90

Query: 102 ---------------------------------RFWQHEWDDHGTCSDPPF-NQLQYFQT 161
                                             FW HEW+ HGTCS P F ++  YF T
Sbjct: 91  FKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLT 150

Query: 162 SLNIRTNPNYNLLAILNAAGLGPTTTTVRQYRDIESAIQAATGKIPGLRCNSNALTGRRQ 181
           +LN+     +N+  +L  AG   + +       I +AIQ A    P + C  +A+     
Sbjct: 151 TLNLYL--KHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAID---- 210

The following BLAST results are available for this feature:

BLAST of Lsi03G014850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	1.8e-25	34.01	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P80196	2.7e-18	31.90	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P42813	8.0e-18	27.43	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80022	2.0e-16	27.44	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42815	7.5e-16	29.27	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]

BLAST of Lsi03G014850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXD5	2.4e-89	63.44	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1	[more]
A0A6J1IAR7	6.9e-89	64.62	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1	[more]
A0A6J1F837	6.7e-68	57.20	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1	[more]
A0A6J1E145	8.5e-55	48.91	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024988 PE=3 SV=1	[more]
A0A6J1DYQ5	5.1e-52	44.84	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024276 PE=3 SV=1	[more]

BLAST of Lsi03G014850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906187.1	1.4e-112	75.27	ribonuclease MC-like [Benincasa hispida]	[more]
XP_023514499.1	5.2e-91	65.82	ribonuclease MC-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932791.1	4.9e-89	63.44	ribonuclease MC-like [Cucurbita moschata]	[more]
XP_022974221.1	1.4e-88	64.62	ribonuclease MC-like [Cucurbita maxima]	[more]
KAG6581688.1	7.8e-79	64.54	hypothetical protein SDJN03_21690, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi03G014850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	5.7e-19	27.43	ribonuclease 1	[more]
AT1G26820.1	5.3e-17	29.27	ribonuclease 3	[more]
AT1G14220.1	9.1e-17	27.98	Ribonuclease T2 family protein	[more]
AT1G14210.1	8.5e-15	33.90	Ribonuclease T2 family protein	[more]
AT2G39780.1	1.4e-09	26.70	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 79..187 e-value: 9.3E-22 score: 78.1
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 30..76 coord: 80..197
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 78..227 e-value: 6.7E-30 score: 106.5 coord: 39..77 e-value: 1.6E-5 score: 26.7
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 43..202
None	No IPR available	PANTHER	PTHR11240:SF49	RIBONUCLEASE 3	coord: 30..76 coord: 80..197
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 43..201 e-value: 3.30113E-49 score: 159.035

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G014850.1	Lsi03G014850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding