Lsi03G014810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAACATTTAATAATTTTATTTTCTCAATTGGTCCCCATCTACACTACACTATACGAATTAATTTCGTGCCTATAAGATATTTCACTTCCTTCCTTCAAAATTAAAAGTATCTTACTCCTTTCTTCCCATAAGGTACTGAAATTAAAATAAAAATAAATCGCTCCCAACTTTTCAAAAGCCCTAAAAAATGGCGAGAGAAATCCCTAAATCAAGCAATTGGAGCAGCGGCAATGAAGAGGCCTTAATCTCCGTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCGCCGGAGTTCTCAAGAAAGGTACGGATTTATGATTAATTTTGTTGTTGTTGGTTGAATTTGAAGCGATTGGTTTCTCATCGGCGGATTCTTGTGGTGGTTTAGCTTGTTGCGGAGGTGATTGCGACGTATTTGCTTGTGTTTGTGACGTGTGGGGCGGCGGCATTGAGTGTGAGTGATGAACGGGAAGTGTCGAAGCTTGGAGCGTCGATTACCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCTCATATGAATCCGGCGGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCTTGGAAACAGGTACTTTCTTCTTCCTCCTCCTAAAACCCCTTTTCCCTTTCCCCAATTTTTCTTTTGTGAATTTCCTATCTTACCCTTCAACCTTTTTATTTTTTTTTTAATTATATTTATGTTTTACAGATATTTTTAATTTTGAAAAAAAAAAACCCGTGTCAAACATTTACTAAATTTTATTTTGGTAAGTTTGTTACAAATTACAGAATGTCTACCTAGTTAATTGATTTTTTTTTTTAATAAGTTTTGATCTTTAGCTTATCCTCAATGGTGGAAATAAATGGATAGGGTAATACATTTTTACCTTCTGAGTTTCAAATTCAATTTGGTTTGTAAGTTTTAAAAGGCTACATTTTGACCTTTGAATTTTATATTTAATTCTCATTTAGTCCTTAAATTTTAATATTCTACTTTTTTTTTTTTAGTATGGAGCTTTCTACTAATACTTACTTTGATCTTTGCTATTAACATTCAATAAATAATTTTAAATAATTATAATATAAAAAACTTTAAGTAATTTTAAAAGTGATGAAAAATTAGTTTAAACTAATTTAATTTAATTATAATTTATTTATTTCTTTTAAATTAATAAATAGATATAATATTAATAATGAAAAGTGAGTACTGAATACTTAGCGAAAAATGAAGAGTAAAAACGGAGATCTTGAAATAAGGACCAAATAAAATTTAAATTAGAAATTCATGGTTCATGATAAAACGGTAACATTTTGATGCGAGAACAAATTTTACCAAATAAAAACTACACACAAAATTTAAGGATTAAAAAGCTGATTTTTTTTTTTTAACATTAAATATGTGTGGTAATATCAAAGTGTGCATACCTTAAAAGCAAGCCTCACAATAGGTGGTTGAGTTGATATGTCTACGAGAGTATATCTATATTAGGTGATAGAATAATAACAAAAGACAATTGTTTTTTTTTCTTTTGACATATATTTTTTTTTTCTTTTTGACATATAGAAAATAAATGAAAATAATAATTATTTATTTTAAGTTTACAAAAGTTAAAAATAATTTTTTTTATTTGTTATTTAAAATTATTTAATTAATTAAATTTATATATAATATATTAAATTTAAAAAAATTTGGAACAAAAAAATTGAAAGTTTATACACCAATCACCCTGAATCTGAAGTTTTGAATTATTAGTATACTCTCTTACTTAACCATTAAGGAAAAAAAAAAAACATTCAATCAATTTATATTTTTATTATGTTTTTTTTGTCTGGATGGGTGGGGATTAATTATAATTTTAAAGTTGAAATTAGTCGGAATGATGTATGAGTTGTGCCACTTCATCAAAAAGGAAAAAGAAAAAAGAAAAAAGGGAAAAGTGCAATTTATGCCACGTAAGAAATGACGTGGATGAGGTGTAGGGGAGATATTTTGAGGAGGGTCCCACCAAGGTGGCAGATATTTATAAAATGAAGGACTATTGGTAGATACTTACTAGGAAAGCAGCCTTATTTGTTTTTTAATTCACCAAACGACATCATAATTGAGAATATAAATTCTTTTGTTGACGAATATGCTTTTGCATCTTATTCATTTTGGACCTTCAAATGTTTCTATTTTATTTTCAAACATATTTTTTTTAAAAAAAATGTGAATGAACTATTTCAACTGGATCATAAGTTAGTAGTGATTGACGGATACTTATTTCTTTGAGATTGAAAGTTCAAATATGTGTGAATTTAATTATATGAATTGATGCAGGTTCCACTGTATGCAGCAGCTCAATTAAGTGGAGCTACAACAGCAGCCTTTACACTGCGCATATTATTAGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTTTAAAGCACTTATCATGGAGATTGTTGTTTCATTTTGTATGATGTTCATCACTTCTGCGGTTGCTACCGACACGAAAGCGGTAAGAACATCTTATTATTGTTAACCTCTTACTCCCAACCTTCTCTTACTTTCATTTGGCTAAGTTTCTCCATGTGATTTTTGGCAGATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGTATGTATCACATCCATCTTTGCTGGGTAAGTAAAACAAAAATAGTTGTTTTAGTTTGGCTTTTTATTCTGTAAAAGCTTTGTGTGTATTTGGAGAAAATCTCAAGGAAGATCTCAATTTGGTTAAATTGCAAATTTGTCCCTATAGTTTGAAGAAAGTTAGAACTTAGTCCCTATGGTTTGCAATTAAACCTTAAAACATATTCTATGTCCAACAAAATGTGCATATAGTAGATGAAAATGTATCTTTTTAGTCTCGAGTTTTGAAGAATAGGTCTATTTGGTTTATGAATTTTCAAAATGTAACTTTCTAGTTATTTTTTGAATTTTTAAGAATAGGTGTGTTTCAGTGTTTGGTCTTTAAACGTAACTTTTGAGTCTGAATACGTACAATTTTTTCAAAATTATAAATTAAGGTTAAGAGATAGAATCTGATATAAGTTGGGTGAACCATGTGTAGGCCAATATCGGGCGGGTCGATGAACCCAGCAAGGTCAATAGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACCTGGTCGGCCCAGTTGCAGGAACATTGCTGGGGGCATTTTCATATAACTTCGTACGAGCCACTGAAAAACATTCCCATCCACTTTCTTTACAATGAATCGGATGATGCTGGATGTTCAAATCACATCAATGAGTTTAATTATTGTATAAACTGTGTATGTTGTATAAAAGCTGTAACGTTTAATTTTAAGTTGTATTTTTTAAATTTTTTTTTAAGGTAAGGTAAGGTTAGATTTAATTTTAAGTTTCTTTTACATTTTTTTTTTTTTAGTTTTGTGAGAAGAATGGATCTGAA ATAACATTTAATAATTTTATTTTCTCAATTGGTCCCCATCTACACTACACTATACGAATTAATTTCGTGCCTATAAGATATTTCACTTCCTTCCTTCAAAATTAAAAGTATCTTACTCCTTTCTTCCCATAAGGTACTGAAATTAAAATAAAAATAAATCGCTCCCAACTTTTCAAAAGCCCTAAAAAATGGCGAGAGAAATCCCTAAATCAAGCAATTGGAGCAGCGGCAATGAAGAGGCCTTAATCTCCGTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCGCCGGAGTTCTCAAGAAAGCTTGTTGCGGAGGTGATTGCGACGTATTTGCTTGTGTTTGTGACGTGTGGGGCGGCGGCATTGAGTGTGAGTGATGAACGGGAAGTGTCGAAGCTTGGAGCGTCGATTACCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCTCATATGAATCCGGCGGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCTTGGAAACAGGTTCCACTGTATGCAGCAGCTCAATTAAGTGGAGCTACAACAGCAGCCTTTACACTGCGCATATTATTAGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTTTAAAGCACTTATCATGGAGATTGTTGTTTCATTTTGTATGATGTTCATCACTTCTGCGGTTGCTACCGACACGAAAGCGATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGCCAATATCGGGCGGGTCGATGAACCCAGCAAGGTCAATAGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACCTGGTCGGCCCAGTTGCAGGAACATTGCTGGGGGCATTTTCATATAACTTCGTACGAGCCACTGAAAAACATTCCCATCCACTTTCTTTACAATGAATCGGATGATGCTGGATGTTCAAATCACATCAATGAGTTTAATTATTGTATAAACTGTGTATGTTGTATAAAAGCTGTAACGTTTAATTTTAAGTTGTATTTTTTAAATTTTTTTTTAAGGTAAGGTAAGGTTAGATTTAATTTTAAGTTTCTTTTACATTTTTTTTTTTTTAGTTTTGTGAGAAGAATGGATCTGAA ATGGCGAGAGAAATCCCTAAATCAAGCAATTGGAGCAGCGGCAATGAAGAGGCCTTAATCTCCGTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCGCCGGAGTTCTCAAGAAAGCTTGTTGCGGAGGTGATTGCGACGTATTTGCTTGTGTTTGTGACGTGTGGGGCGGCGGCATTGAGTGTGAGTGATGAACGGGAAGTGTCGAAGCTTGGAGCGTCGATTACCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCTCATATGAATCCGGCGGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCTTGGAAACAGGTTCCACTGTATGCAGCAGCTCAATTAAGTGGAGCTACAACAGCAGCCTTTACACTGCGCATATTATTAGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTTTAAAGCACTTATCATGGAGATTGTTGTTTCATTTTGTATGATGTTCATCACTTCTGCGGTTGCTACCGACACGAAAGCGATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGCCAATATCGGGCGGGTCGATGAACCCAGCAAGGTCAATAGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACCTGGTCGGCCCAGTTGCAGGAACATTGCTGGGGGCATTTTCATATAA MAREIPKSSNWSSGNEEALISVGSEYSDPQQSFFRDRFYELYPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDEREVSKLGASITGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWKQVPLYAAAQLSGATTAAFTLRILLDPIQDLGTTSPSGPAFKALIMEIVVSFCMMFITSAVATDTKAIGELGGIAVGSAANIGRVDEPSKVNRTSDCKFTLRRDLGVPGRPSCRNIAGGIFI Homology
BLAST of Lsi03G014810 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.1e-53 Identity = 108/186 (58.06%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 9.3e-53 Identity = 105/173 (60.69%), Postives = 136/173 (78.61%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 205.3 bits (521), Expect = 7.9e-52 Identity = 107/197 (54.31%), Postives = 144/197 (73.10%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 7.9e-52 Identity = 102/165 (61.82%), Postives = 130/165 (78.79%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.9e-51 Identity = 106/197 (53.81%), Postives = 141/197 (71.57%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy TrEMBL
Match: A0A6J1J0H5 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482345 PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87 Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy TrEMBL
Match: A0A172B7P2 (Silicon transporter 3 OS=Cucurbita moschata OX=3662 GN=Lsi3 PE=2 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87 Identity = 171/197 (86.80%), Postives = 188/197 (95.43%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy TrEMBL
Match: A0A172B0F5 (Silicon transporter 3 OS=Cucurbita ficifolia OX=37645 GN=Lsi3 PE=2 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87 Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy TrEMBL
Match: A0A6J1FB40 (aquaporin NIP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111442441 PE=3 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87 Identity = 171/197 (86.80%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. ExPASy TrEMBL
Match: A0A1S3B8P6 (aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487003 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.5e-82 Identity = 167/193 (86.53%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Lsi03G014810 vs. NCBI nr
Match: XP_038906096.1 (aquaporin NIP2-2-like [Benincasa hispida]) HSP 1 Score: 360.9 bits (925), Expect = 8.5e-96 Identity = 191/204 (93.63%), Postives = 195/204 (95.59%), Query Frame = 0
BLAST of Lsi03G014810 vs. NCBI nr
Match: XP_023528272.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87 Identity = 173/197 (87.82%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. NCBI nr
Match: KAG6580963.1 (Aquaporin NIP2-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 332.8 bits (852), Expect = 2.5e-87 Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. NCBI nr
Match: XP_022983857.1 (aquaporin NIP2-1-like [Cucurbita maxima]) HSP 1 Score: 332.8 bits (852), Expect = 2.5e-87 Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Lsi03G014810 vs. NCBI nr
Match: AKH49406.1 (silicon transporter 3 [Cucurbita moschata]) HSP 1 Score: 332.0 bits (850), Expect = 4.3e-87 Identity = 171/197 (86.80%), Postives = 188/197 (95.43%), Query Frame = 0
BLAST of Lsi03G014810 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 151.4 bits (381), Expect = 9.6e-37 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 0
BLAST of Lsi03G014810 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 149.4 bits (376), Expect = 3.6e-36 Identity = 80/155 (51.61%), Postives = 108/155 (69.68%), Query Frame = 0
BLAST of Lsi03G014810 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 0
BLAST of Lsi03G014810 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 141.7 bits (356), Expect = 7.6e-34 Identity = 77/163 (47.24%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of Lsi03G014810 vs. TAIR 10
Match: AT1G80760.1 (NOD26-like intrinsic protein 6;1 ) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 72/162 (44.44%), Postives = 106/162 (65.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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