Lsi03G013020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G013020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1639)
Location	chr03: 23861413 .. 23862715 (-)
RNA-Seq Expression	Lsi03G013020
Synteny	Lsi03G013020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTTGTTGATCTATTACTTCAATTTGTGTTGTTATAAGCTATATATTTCTGTTGTGTTGTGTTCTTGCGTCTTCTTCTCCTCCCCCAGCTAGAAAAGAGGGCAATTCAAGAGAAGATGTTTCTCCAGAAATAACAAAAGGTAAAAGAATTTTGTGTTGTTGTTGGATCTGTTTGGTGACAGGAATTTTGAGGGCGTTACTTCGCTGCGTAACGGTGGTGCAGGCACATCGCCGTCGCCAGAGAAGGAAGACCGTTACTACGCCACCAGAGGATCCGCGGCGGCGGTAGTGGACGAGAACGGCCACAGCCACGGCCATGAGGAGAGAGGAGGCAGCTTTGTTTTACCAAAGCTGTTGATTGCTTTGTCAAGCAAAGAAAAGGAAGAAGACTTCATGGCCATGAAAGGCTGCAAGCTCCCACAAAGGCCCAAAAAGAGAGCCAAGATGATTCAGAGAAGCTTACTTGTAAGCAACAACATTTCTCCTTTTCTCTTCCCTTTCTCTCTTCTGTGGCTTAGTTATTGGAATTTTGTGTCAGCTGGTGAGCCCTGGTGCATGGCTGACTGAAATGAGCCAAGAAAGATATGAAGTTAGGGAAAAGAAGACAACAAAGAAGGTAACACAACAAACTTTGTTTCTTTTCTGATCTTCTTCTCCTAAATTGGGCTATGGCTGGCTTGAAGTTGAAAATGCTTCTTCTTCCTTTTTGTTTTGTGGGTTTTGAATTTGCAGAGGCCAACAGGGCTGAAAGCCATGGGAAGTATGGAAACTGATTCAGAATGAGGATCAAAATGTGAAGAAATTGAAACTGAACTGACCCTTTTGATTTTTTTTTTGGAATGGTGAATTTGAATGAAGAATAGAAGAGAGAGATAAATGTGAATCTCATCATCATCCTCAGCCTCTGCTCTCTGCGCTTTTGGAATTATGACTCAAAGTCACAATTTGGCTTTGGATTTGATGCTAAAGAAGTCCGCTTTTGGTGCTATGTTAGGCAGAGCCGCGAAAGCGATGGATTGTTTACGAATTAAAAAAAGAAAAAGAAAATGGAGAAATGAAAAAAAGAAAAGAAAAGAAGAATTGTCCCTTTTTTTTGTGTGTATAATAATATATTAATATGTAATCTAAAGAGAATTAGAGAAAGTCTTGTATCTTGATCATCATCCATCAAATGAAATGGAAATTTATCGTTCTTATTTGAAATTAATGACAATTAAGGAAATGTATTTCGATTGATCAGGAAAAATATATATGTAATTGAAACTAAGAAAAATATATTTTAAATTTAATTACAATTTT

mRNA sequence

ATGAAATTTAATTTTGTGTTGTTGTTGGATCTGTTTGGTGACAGGAATTTTGAGGGCGTTACTTCGCTGCGTAACGGTGGTGCAGGCACATCGCCGTCGCCAGAGAAGGAAGACCGTTACTACGCCACCAGAGGATCCGCGGCGGCGGTAGTGGACGAGAACGGCCACAGCCACGGCCATGAGGAGAGAGGAGGCAGCTTTGTTTTACCAAAGCTGTTGATTGCTTTGTCAAGCAAAGAAAAGGAAGAAGACTTCATGGCCATGAAAGGCTGCAAGCTCCCACAAAGGCCCAAAAAGAGAGCCAAGATGATTCAGAGAAGCTTACTTCTGGTGAGCCCTGGTGCATGGCTGACTGAAATGAGCCAAGAAAGATATGAAGTTAGGGAAAAGAAGACAACAAAGAAGAGGCCAACAGGGCTGAAAGCCATGGGAAGTATGGAAACTGATTCAGAATGAGGATCAAAATGTGAAGAAATTGAAACTGAACTGACCCTTTTGATTTTTTTTTTGGAATGGTGAATTTGAATGAAGAATAGAAGAGAGAGATAAATGTGAATCTCATCATCATCCTCAGCCTCTGCTCTCTGCGCTTTTGGAATTATGACTCAAAGTCACAATTTGGCTTTGGATTTGATGCTAAAGAAGTCCGCTTTTGGTGCTATGTTAGGCAGAGCCGCGAAAGCGATGGATTGTTTACGAATTAAAAAAAGAAAAAGAAAATGGAGAAATGAAAAAAAGAAAAGAAAAGAAGAATTGTCCCTTTTTTTTGTGTGTATAATAATATATTAATATGTAATCTAAAGAGAATTAGAGAAAGTCTTGTATCTTGATCATCATCCATCAAATGAAATGGAAATTTATCGTTCTTATTTGAAATTAATGACAATTAAGGAAATGTATTTCGATTGATCAGGAAAAATATATATGTAATTGAAACTAAGAAAAATATATTTTAAATTTAATTACAATTTT

Coding sequence (CDS)

ATGAAATTTAATTTTGTGTTGTTGTTGGATCTGTTTGGTGACAGGAATTTTGAGGGCGTTACTTCGCTGCGTAACGGTGGTGCAGGCACATCGCCGTCGCCAGAGAAGGAAGACCGTTACTACGCCACCAGAGGATCCGCGGCGGCGGTAGTGGACGAGAACGGCCACAGCCACGGCCATGAGGAGAGAGGAGGCAGCTTTGTTTTACCAAAGCTGTTGATTGCTTTGTCAAGCAAAGAAAAGGAAGAAGACTTCATGGCCATGAAAGGCTGCAAGCTCCCACAAAGGCCCAAAAAGAGAGCCAAGATGATTCAGAGAAGCTTACTTCTGGTGAGCCCTGGTGCATGGCTGACTGAAATGAGCCAAGAAAGATATGAAGTTAGGGAAAAGAAGACAACAAAGAAGAGGCCAACAGGGCTGAAAGCCATGGGAAGTATGGAAACTGATTCAGAATGA

Protein sequence

MKFNFVLLLDLFGDRNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLIALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTKKRPTGLKAMGSMETDSE

Homology

[Close]

BLAST of Lsi03G013020 vs. ExPASy TrEMBL
Match: A0A1S4E569 (uncharacterized protein LOC103502965 OS=Cucumis melo OX=3656 GN=LOC103502965 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.4e-62
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGT+PSPEKEDRYY+TRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTAPSPEKEDRYYSTRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. ExPASy TrEMBL
Match: A0A5A7UCC4 (DUF1639 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00040 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.4e-62
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGT+PSPEKEDRYY+TRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTAPSPEKEDRYYSTRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. ExPASy TrEMBL
Match: A0A0A0LFM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843240 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 128/138 (92.75%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGT+PSPEKEDRYY+TRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTAPSPEKEDRYYSTRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAM-GSMETDSE 152
           KRPTGLKAM GSMETDSE
Sbjct: 198 KRPTGLKAMGGSMETDSE 211

[Close]

BLAST of Lsi03G013020 vs. ExPASy TrEMBL
Match: A0A6J1F339 (uncharacterized protein LOC111439254 OS=Cucurbita moschata OX=3662 GN=LOC111439254 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGV +LRNGGAGT+PSPEKEDRYYATRGS AAVVDE    HGHEERGG +V PKLLI
Sbjct: 78  RNSEGVATLRNGGAGTAPSPEKEDRYYATRGSTAAVVDE----HGHEERGGCYVWPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLP RPKKRAKMIQRSLLLVSPGAWLTEMSQERYEV EKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPIRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVTEKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. ExPASy TrEMBL
Match: A0A6J1IAR3 (uncharacterized protein LOC111472840 OS=Cucurbita maxima OX=3661 GN=LOC111472840 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGV +LRNGGAGT+PSPEKEDRYYATRGS AAVVDEN    GHEERGG +V PKLLI
Sbjct: 78  RNSEGVATLRNGGAGTAPSPEKEDRYYATRGSTAAVVDEN----GHEERGGCYVWPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLP RPKKRAKMIQRSLLLVSPGAWLTEMSQERYEV EKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPIRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVMEKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. NCBI nr
Match: XP_038905231.1 (uncharacterized protein LOC120091318 isoform X2 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 129/137 (94.16%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGTSPSPEKEDRYYATRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTSPSPEKEDRYYATRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGS ETDSE
Sbjct: 198 KRPTGLKAMGSTETDSE 210

[Close]

BLAST of Lsi03G013020 vs. NCBI nr
Match: XP_008465311.1 (PREDICTED: uncharacterized protein LOC103502965 [Cucumis melo] >XP_016903367.1 PREDICTED: uncharacterized protein LOC103502965 [Cucumis melo] >KAA0051285.1 DUF1639 domain-containing protein [Cucumis melo var. makuwa] >TYK29977.1 DUF1639 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGT+PSPEKEDRYY+TRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTAPSPEKEDRYYSTRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. NCBI nr
Match: XP_011652319.1 (uncharacterized protein LOC101204535 [Cucumis sativus] >XP_011652320.1 uncharacterized protein LOC101204535 [Cucumis sativus] >XP_031738953.1 uncharacterized protein LOC101204535 [Cucumis sativus] >KGN59754.1 hypothetical protein Csa_000853 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 128/138 (92.75%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGT+PSPEKEDRYY+TRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTAPSPEKEDRYYSTRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 197

Query: 135 KRPTGLKAM-GSMETDSE 152
           KRPTGLKAM GSMETDSE
Sbjct: 198 KRPTGLKAMGGSMETDSE 211

[Close]

BLAST of Lsi03G013020 vs. NCBI nr
Match: XP_038905228.1 (uncharacterized protein LOC120091318 isoform X1 [Benincasa hispida] >XP_038905229.1 uncharacterized protein LOC120091318 isoform X1 [Benincasa hispida] >XP_038905230.1 uncharacterized protein LOC120091318 isoform X1 [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 129/144 (89.58%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGVT+LRNGGAGTSPSPEKEDRYYATRGS AAVVDEN    GHEERGGSFVLPKLLI
Sbjct: 78  RNSEGVTTLRNGGAGTSPSPEKEDRYYATRGSTAAVVDEN----GHEERGGSFVLPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLL-------LVSPGAWLTEMSQERYEV 134
           ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLL       LVSPGAWLTEMSQERYEV
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLLEFCVQLVSPGAWLTEMSQERYEV 197

Query: 135 REKKTTKKRPTGLKAMGSMETDSE 152
           REKKTTKKRPTGLKAMGS ETDSE
Sbjct: 198 REKKTTKKRPTGLKAMGSTETDSE 217

[Close]

BLAST of Lsi03G013020 vs. NCBI nr
Match: XP_022932795.1 (uncharacterized protein LOC111439254 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 15  RNFEGVTSLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHEERGGSFVLPKLLI 74
           RN EGV +LRNGGAGT+PSPEKEDRYYATRGS AAVVDE    HGHEERGG +V PKLLI
Sbjct: 78  RNSEGVATLRNGGAGTAPSPEKEDRYYATRGSTAAVVDE----HGHEERGGCYVWPKLLI 137

Query: 75  ALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTK 134
           ALSSKEKEEDFMAMKGCKLP RPKKRAKMIQRSLLLVSPGAWLTEMSQERYEV EKKTTK
Sbjct: 138 ALSSKEKEEDFMAMKGCKLPIRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVTEKKTTK 197

Query: 135 KRPTGLKAMGSMETDSE 152
           KRPTGLKAMGSMETDSE
Sbjct: 198 KRPTGLKAMGSMETDSE 210

[Close]

BLAST of Lsi03G013020 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) )

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-39
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 33  SPEKEDRYYATRGSAAAVVDENGHSHGHE-ERGGSFVLPKLLIALSSKEKEEDFMAMKGC 92
           SPEKEDRYY TRGS    +DE+G       +     V PKL IALS+KEKEEDF+AMKGC
Sbjct: 78  SPEKEDRYYTTRGSMG--IDESGKIIKEPVKETKKHVWPKLYIALSNKEKEEDFLAMKGC 137

Query: 93  KLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTKKRPTGLKAMGSMETDSE 152
           KLPQRPKKRAK++Q++LLLVSPGAWL+++ +ERYEVREKKT+KKRP GLKAMGSME+DSE
Sbjct: 138 KLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYEVREKKTSKKRPRGLKAMGSMESDSE 195

[Close]

BLAST of Lsi03G013020 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 158.3 bits (399), Expect = 4.9e-39
Identity = 87/131 (66.41%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 22  SLRNGGAGTSPSPEKEDRYYATRGSAAAVVDENGHSHGHE-ERGGSFVLPKLLIALSSKE 81
           SL N       SPEKEDRYY TRGS    +DE+G       +     V PKL IALS+KE
Sbjct: 77  SLVNVRRSFMASPEKEDRYYTTRGSMG--IDESGKIIKEPVKETKKHVWPKLYIALSNKE 136

Query: 82  KEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTKKRPTGL 141
           KEEDF+AMKGCKLPQRPKKRAK++Q++LLLVSPGAWL+++ +ERYEVREKKT+KKRP GL
Sbjct: 137 KEEDFLAMKGCKLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYEVREKKTSKKRPRGL 196

Query: 142 KAMGSMETDSE 152
           KAMGSME+DSE
Sbjct: 197 KAMGSMESDSE 205

[Close]

BLAST of Lsi03G013020 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 134.8 bits (338), Expect = 5.7e-32
Identity = 75/127 (59.06%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 32  PSPEKEDRYYATRGSAAAVVDE------NGHSHGHEERGGSFVLPKLLIALSSKEKEEDF 91
           PSPEKE+RYY TRG    +  +      NG    ++E     + PKL I LS+KEKEEDF
Sbjct: 70  PSPEKEERYYTTRGVVDNIGKDCLDGNINGEDSNNKEES---MWPKLFITLSNKEKEEDF 129

Query: 92  MAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVREKKTTKK-RPTGLKAMG 151
           MAMKGCK   RPKKRAK+IQRSLLLVSPG WL ++  +RY+VR KK++KK R  GLKAMG
Sbjct: 130 MAMKGCKPSHRPKKRAKLIQRSLLLVSPGTWLADLCPDRYDVRVKKSSKKRRARGLKAMG 189

[Close]

BLAST of Lsi03G013020 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) )

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-21
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 16  NFEGVTSLRNGGAGTS-PSPEKEDRYYATRGSAAAVVDENGHSH-----------GHEE- 75
           N  G    R+GG+  S PSP++ ++  + R       D     H           GH+E 
Sbjct: 196 NINGRMISRSGGSKRSPPSPDQIEKRSSVRDQRQNGFDHQQQQHQRVNRSESTAQGHQEV 255

Query: 76  ------RGGSFVLPKLLIALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAW 135
                    +   P++ IALS KEKEEDF+ MKG KLP RP+KRAK I ++L    PG W
Sbjct: 256 EINGEREKATQEWPRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMW 315

Query: 136 LTEMSQERYEVREKKTTKK--RPTGLKAMGSMETDSE 152
           L+++++ RYEVREKK  KK  +  GLK M +M+TDSE
Sbjct: 316 LSDLTKNRYEVREKKNVKKQQKRRGLKGMENMDTDSE 352

[Close]

BLAST of Lsi03G013020 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 87.8 bits (216), Expect = 8.1e-18
Identity = 55/139 (39.57%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 16  NFEGVTSLRNGGAGTS-PSPEKEDRYYATRGSAAAVVDENGHSH-----------GHEE- 75
           N  G    R+GG+  S PSP++ ++  + R       D     H           GH+E 
Sbjct: 196 NINGRMISRSGGSKRSPPSPDQIEKRSSVRDQRQNGFDHQQQQHQRVNRSESTAQGHQEV 255

Query: 76  ------RGGSFVLPKLLIALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAW 135
                    +   P++ IALS KEKEEDF+ MKG KLP RP+KRAK I ++L    PG W
Sbjct: 256 EINGEREKATQEWPRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMW 315

The following BLAST results are available for this feature:

BLAST of Lsi03G013020 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G013020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E569	5.4e-62	93.43	uncharacterized protein LOC103502965 OS=Cucumis melo OX=3656 GN=LOC103502965 PE=...	[more]
A0A5A7UCC4	5.4e-62	93.43	DUF1639 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LFM7	1.3e-60	92.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843240 PE=4 SV=1	[more]
A0A6J1F339	9.5e-59	89.78	uncharacterized protein LOC111439254 OS=Cucurbita moschata OX=3662 GN=LOC1114392...	[more]
A0A6J1IAR3	1.6e-58	89.78	uncharacterized protein LOC111472840 OS=Cucurbita maxima OX=3661 GN=LOC111472840...	[more]

BLAST of Lsi03G013020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905231.1	1.1e-61	94.16	uncharacterized protein LOC120091318 isoform X2 [Benincasa hispida]	[more]
XP_008465311.1	1.1e-61	93.43	PREDICTED: uncharacterized protein LOC103502965 [Cucumis melo] >XP_016903367.1 P...	[more]
XP_011652319.1	2.7e-60	92.75	uncharacterized protein LOC101204535 [Cucumis sativus] >XP_011652320.1 uncharact...	[more]
XP_038905228.1	1.4e-59	89.58	uncharacterized protein LOC120091318 isoform X1 [Benincasa hispida] >XP_03890522...	[more]
XP_022932795.1	2.0e-58	89.78	uncharacterized protein LOC111439254 [Cucurbita moschata]	[more]

BLAST of Lsi03G013020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55340.2	3.7e-39	70.00	Protein of unknown function (DUF1639)	[more]
AT1G55340.1	4.9e-39	66.41	Protein of unknown function (DUF1639)	[more]
AT3G03880.1	5.7e-32	59.06	Protein of unknown function (DUF1639)	[more]
AT4G20300.2	3.5e-21	40.76	Protein of unknown function (DUF1639)	[more]
AT4G20300.1	8.1e-18	39.57	Protein of unknown function (DUF1639)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012438	Protein of unknown function DUF1639	PFAM	PF07797	DUF1639	coord: 76..125 e-value: 5.9E-23 score: 80.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..151
None	No IPR available	PANTHER	PTHR33130	PUTATIVE (DUF1639)-RELATED	coord: 27..151
None	No IPR available	PANTHER	PTHR33130:SF42	DUF1639 FAMILY PROTEIN	coord: 27..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G013020.1	Lsi03G013020.1	mRNA