Lsi03G012240 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G012240
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Clustered mitochondria protein homolog
Location	chr03: 22825611 .. 22828150 (+)
RNA-Seq Expression	Lsi03G012240
Synteny	Lsi03G012240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTATGCCCACCACCTGGGGTTAGTTCGTTATATGACTCCGTAGGAAGCAATTGCATGAACATCCTCTCTGGAAGTTCTGTTTATAATAACTGGTTTTACAATTAGCATAGGTTATGCATTTGCTGCTAGAGATATATATTGTTTACCACTGTTTTCCTTTGCTTTCCTTTCACTTAAAAGCTATAGATGTGTAAATGAGATTATTTTATGGGGTTCATCTGTTATAAATGATATACACCTAAATGAAAATTAAATATATGATATATAATGTCCAACAAATTAGTCCAATGCAACTGATTATGTCGGTGCTTTCCTGTCTTTGTATCCCTGCATGTATGTTGTCTTATAAATTTGTTTGCGGATCTTTTTCCTGATATGAATTTTGTTTGCTTCTGTAGTTATGGGAATATGGCTCTTTTCTACCATGGACTTAACCAAACAGAACTTGCACTACGACACATGTCCCGAGCATTGCTGCTGCTAAGTTTATCATCTGGTCCTGACCATCCTGATGTTGCGGCAACTTTCATAAATGTTGCAATGATGTACCAGGATATTGGAAAGATGAACACCGCTCTTCGTTATTTGCAAGAAGCGTTGAAGAAAAATGAAAGACTTCTAGGCGAGGAACATATTCAAACTGCTGTTTGTTACCATGCTCTTGCTATTGCATTCAATTGTATGGGTGCCTTTAAACTGTCCCACCAGGTAATTCCTTGAACAGAAGCTTTGAATAATGTTTATCCGATGTAATGTATGACCAAGATTTCATCTCTCTCGGCAGCATGAAAAGAAAACCTATGATATACTGGTCAAACAATTGGGCGAAGAAGATTCGCGAACGCGAGATTCAGAAAATTGGATGAAGACATTTAAGATGCGTGAGGTACAGGTCAGTGAAAGATGGAAAAAAAATGAAGGTTAGAGCTGCCAAAAATGCCTCTTTTGTCGTTTAACAATACAGATTTCATATTTTGACAGATGAATGCTCAGAAACAGAAAGGCCAAACTTTGAATGCTGCCTCGGCTCAGAAGGCTATTGATATTCTTAAGGTATTCTTGTAAGAGGCTCAATTTTAATAACTAATGAGACTTACTAGAGAAGAAGATAATTATATAAATACTACATGAAGATGCCCCAGGTAGTGAGAGTGAGAGATGAACTTCGAGTGAAGTTGCAAGAAAATTTTGCTTGCACAAAACTTGGAATTAGAGCTCCTAAATGAAGTTGCAAGTGGAATATTATTGCACGTTTGTGGCAAGAGGAATGGTTAAAATTCTACTGTGCAATGTGATTAGGGAACTGACTTCTAATTATTCTGTATTTGCTTCATTAGGCACATGCAACTGTCTCTGGCATCTTAATAAGCTCAAGATTTGATTCGTGGGGATATTTATTATATTCTTGTAATCGTTTTATTGCAACATTATCTTGTTCAACGGTTATTGTACAAAATTGAAAGGCTTCATTTCTGAATACCTTGCAGTCTCATCCCGACTTAATACAAGCATTTCAAGCTGCTGCAGTAGCTGGTGGTGGATCTGGCAGTTCTGGAGCTCCTATCAACAAATCCCTGAATGCTGCCATTATTGGTGAAAATCTTCCTCGTGGTAGGGGTGTGGATGAGAGAGCTGCTCGTGCCGCAGCTGAAGTCAGAAAGAAAGCTGCAGCTCGAGGCCTCTTGATACGTCAACCGGGTGTCCCGGTTCAAGCTATGCCACCACTTACCCAGCTGCTCAATATCATCAATTCTGGCATGACACCGGATGCAGCAGATAATAGCGAAACAGATGGTGAGAAGAAAGATGTTAACACCAACGCTTCTAACGACACCCAGGTAGATGGAAAACAAGAGCAGTTGCCTTCAGTGCAAGATCAAGCCCCCGTTGGATTAGGCTCGGGCTTAGCGTCTTTGGACACAAAGAAACAAAGACCAAAATCAAAAGCTGCAGCTTGATTGTGGAATTTTTTTGTTTAACTGGCCAGAGGATAAATAATTTATTTGGGATAGGGAGGCAACTCTCCAATTGGCAAATAATATGACAATTCTGAGTTCATTTGAGTAAAGAGTTCAGCTTAGTTTTAGCAATTGGCTGCTAAAAATATTTGTTTAGATGTGCCAGTGAAGTTATAGGTATTCCATTTTTTTTTTTTCCAATCCTTTCCCAATAATTAGAATCGTTCAAGAGGGATTTTGAGCACATTTTTATCTTTTTATTTTTGTTTTGTTTTTTTTTTTTTAAGTCAAAACTCAGAAATCAGGTTAATGTAGCACATCTGAGTTCGTTTGTAGGGTATGTAATATGAGATATGATCTTCATCTTCCTCTTTCTGTCGTACTCATCACCTTATTTCAAGCTTAGCAATTTAAAGGCAGTCTGTTCTTTTCAACTTGCAAGTCAAATTTTGAAGTTGTGTTAGCTGGTTTTATTAGTTTGACTTGTAGATTTTTGTAATGGAGTTAGAGATTTGGAAGCACTATTGAATGGTATCGTTGATTTTGGTTCATCTCTTTTTTCTCATGGCATTCATGTCAAA

mRNA sequence

ACTATGCCCACCACCTGGGGTTAGTTCGTTATATGACTCCGTAGGAAGCAATTGCATGAACATCCTCTCTGGAAGTTCTGTTTATAATAACTGGTTTTACAATTAGCATAGGTTATGCATTTGCTGCTAGAGATATATATTGTTTACCACTGTTTTCCTTTGCTTTCCTTTCACTTAAAAGCTATAGATGTGTAAATGAGATTATTTTATGGGGTTCATCTGTTATAAATGATATACACCTAAATGAAAATTAAATATATGATATATAATGTCCAACAAATTAGTCCAATGCAACTGATTATGTCGGTGCTTTCCTGTCTTTGTATCCCTGCATGTATGTTGTCTTATAAATTTGTTTGCGGATCTTTTTCCTGATATGAATTTTGTTTGCTTCTGTAGTTATGGGAATATGGCTCTTTTCTACCATGGACTTAACCAAACAGAACTTGCACTACGACACATGTCCCGAGCATTGCTGCTGCTAAGTTTATCATCTGGTCCTGACCATCCTGATGTTGCGGCAACTTTCATAAATGTTGCAATGATGTACCAGGATATTGGAAAGATGAACACCGCTCTTCGTTATTTGCAAGAAGCGTTGAAGAAAAATGAAAGACTTCTAGGCGAGGAACATATTCAAACTGCTGTTTGTTACCATGCTCTTGCTATTGCATTCAATTGTATGGGTGCCTTTAAACTGTCCCACCAGCATGAAAAGAAAACCTATGATATACTGGTCAAACAATTGGGCGAAGAAGATTCGCGAACGCGAGATTCAGAAAATTGGATGAAGACATTTAAGATGCGTGAGATGAATGCTCAGAAACAGAAAGGCCAAACTTTGAATGCTGCCTCGGCTCAGAAGGCTATTGATATTCTTAAGTCTCATCCCGACTTAATACAAGCATTTCAAGCTGCTGCAGTAGCTGGTGGTGGATCTGGCAGTTCTGGAGCTCCTATCAACAAATCCCTGAATGCTGCCATTATTGGTGAAAATCTTCCTCGTGGTAGGGGTGTGGATGAGAGAGCTGCTCGTGCCGCAGCTGAAGTCAGAAAGAAAGCTGCAGCTCGAGGCCTCTTGATACGTCAACCGGGTGTCCCGGTTCAAGCTATGCCACCACTTACCCAGCTGCTCAATATCATCAATTCTGGCATGACACCGGATGCAGCAGATAATAGCGAAACAGATGGTGAGAAGAAAGATGTTAACACCAACGCTTCTAACGACACCCAGGTAGATGGAAAACAAGAGCAGTTGCCTTCAGTGCAAGATCAAGCCCCCGTTGGATTAGGCTCGGGCTTAGCGTCTTTGGACACAAAGAAACAAAGACCAAAATCAAAAGCTGCAGCTTGATTGTGGAATTTTTTTGTTTAACTGGCCAGAGGATAAATAATTTATTTGGGATAGGGAGGCAACTCTCCAATTGGCAAATAATATGACAATTCTGAGTTCATTTGAGTAAAGAGTTCAGCTTAGTTTTAGCAATTGGCTGCTAAAAATATTTGTTTAGATGTGCCAGTGAAGTTATAGGTATTCCATTTTTTTTTTTTCCAATCCTTTCCCAATAATTAGAATCGTTCAAGAGGGATTTTGAGCACATTTTTATCTTTTTATTTTTGTTTTGTTTTTTTTTTTTTAAGTCAAAACTCAGAAATCAGGTTAATGTAGCACATCTGAGTTCGTTTGTAGGGTATGTAATATGAGATATGATCTTCATCTTCCTCTTTCTGTCGTACTCATCACCTTATTTCAAGCTTAGCAATTTAAAGGCAGTCTGTTCTTTTCAACTTGCAAGTCAAATTTTGAAGTTGTGTTAGCTGGTTTTATTAGTTTGACTTGTAGATTTTTGTAATGGAGTTAGAGATTTGGAAGCACTATTGAATGGTATCGTTGATTTTGGTTCATCTCTTTTTTCTCATGGCATTCATGTCAAA

Coding sequence (CDS)

ATGAATTTTGTTTGCTTCTGTAGTTATGGGAATATGGCTCTTTTCTACCATGGACTTAACCAAACAGAACTTGCACTACGACACATGTCCCGAGCATTGCTGCTGCTAAGTTTATCATCTGGTCCTGACCATCCTGATGTTGCGGCAACTTTCATAAATGTTGCAATGATGTACCAGGATATTGGAAAGATGAACACCGCTCTTCGTTATTTGCAAGAAGCGTTGAAGAAAAATGAAAGACTTCTAGGCGAGGAACATATTCAAACTGCTGTTTGTTACCATGCTCTTGCTATTGCATTCAATTGTATGGGTGCCTTTAAACTGTCCCACCAGCATGAAAAGAAAACCTATGATATACTGGTCAAACAATTGGGCGAAGAAGATTCGCGAACGCGAGATTCAGAAAATTGGATGAAGACATTTAAGATGCGTGAGATGAATGCTCAGAAACAGAAAGGCCAAACTTTGAATGCTGCCTCGGCTCAGAAGGCTATTGATATTCTTAAGTCTCATCCCGACTTAATACAAGCATTTCAAGCTGCTGCAGTAGCTGGTGGTGGATCTGGCAGTTCTGGAGCTCCTATCAACAAATCCCTGAATGCTGCCATTATTGGTGAAAATCTTCCTCGTGGTAGGGGTGTGGATGAGAGAGCTGCTCGTGCCGCAGCTGAAGTCAGAAAGAAAGCTGCAGCTCGAGGCCTCTTGATACGTCAACCGGGTGTCCCGGTTCAAGCTATGCCACCACTTACCCAGCTGCTCAATATCATCAATTCTGGCATGACACCGGATGCAGCAGATAATAGCGAAACAGATGGTGAGAAGAAAGATGTTAACACCAACGCTTCTAACGACACCCAGGTAGATGGAAAACAAGAGCAGTTGCCTTCAGTGCAAGATCAAGCCCCCGTTGGATTAGGCTCGGGCTTAGCGTCTTTGGACACAAAGAAACAAAGACCAAAATCAAAAGCTGCAGCTTGA

Protein sequence

MNFVCFCSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTRDSENWMKTFKMREMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAGGGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQAMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGLGSGLASLDTKKQRPKSKAAA

Homology

[Close]

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot
Match: F4J5S1 (Clustered mitochondria protein OS=Arabidopsis thaliana OX=3702 GN=FMT PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.2e-113
Identity = 227/316 (71.84%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELAL++M RALLLL LSSGPDHPDVAATFINVAMMYQD+GKM+TA
Sbjct: 1111 SYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTA 1170

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLG EHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLG++
Sbjct: 1171 LRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDD 1230

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDS NWMKTFKMRE  M AQKQKGQ  NAA+ QKAID+LK+HPDLI AFQ AA  G
Sbjct: 1231 DSRTRDSLNWMKTFKMRELQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATG 1290

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIR-QPGVPVQ 247
                        +LN+A++GE  PRGRG DERAARAAAEVRKKAAA+GLL+R Q GVPVQ
Sbjct: 1291 R---------TNALNSAVLGETQPRGRGFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQ 1350

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            AMPPL+QL N+IN+     A  +SE  GE  +       ++  +GK E L      AP G
Sbjct: 1351 AMPPLSQLQNMINT-----ATVSSEKGGENGEAKVQEKKESSENGKTENL------APAG 1406

Query: 308  LGSGLASLDTKKQRPK 321
            LG+GL SLD KKQ+ K
Sbjct: 1411 LGAGLTSLDKKKQKAK 1406

[Close]

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot
Match: F4JKH6 (Protein TSS OS=Arabidopsis thaliana OX=3702 GN=TSS PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.2e-36
Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYG++A+FY+ L  TELAL++++RAL LL L+ GP HP+ AAT+INVAMM + +   + A
Sbjct: 978  SYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGMKNAHVA 1037

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYL EALK N+RLLG +HIQTA  YHA+AIA + M A+ LS QHE+ T  IL  +LG E
Sbjct: 1038 LRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMDAYSLSVQHEQTTLQILQAKLGPE 1097

Query: 128  DSRTRDSENWMKTFKMREMNAQK 151
            D RT+D+  W++ F+ + +  Q+
Sbjct: 1098 DLRTQDAAAWLEYFESKALEQQE 1120

[Close]

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot
Match: B4GAM1 (Protein clueless OS=Drosophila persimilis OX=7234 GN=clu PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-17
Identity = 46/143 (32.17%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 9    YGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTAL 68
            Y +++L+        ++L+ + RA  LL L+ G DHP+VA    N++++   +G+   +L
Sbjct: 1183 YTHLSLYSFANGHVGMSLKLLYRARYLLVLTCGEDHPEVALIDSNISLILHALGEYELSL 1242

Query: 69   RYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEED 128
            R+++ ALK N +  G + +  AV YH +A   +CMG F+ +  +EK+TY I   QLGE+ 
Sbjct: 1243 RFIEHALKLNLKYFGNKAMHVAVSYHLMARTQSCMGDFRSALNNEKETYSIYKSQLGEKH 1302

Query: 129  SRTRDSENWMKTFKMREMNAQKQ 152
             +TRDS   ++    + +  Q++
Sbjct: 1303 EKTRDSAECLRLLTQQAVLLQRK 1325

[Close]

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot
Match: Q291J5 (Protein clueless OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=clu PE=3 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-17
Identity = 46/143 (32.17%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 9    YGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTAL 68
            Y +++L+        ++L+ + RA  LL L+ G DHP+VA    N++++   +G+   +L
Sbjct: 1183 YTHLSLYSFANGHVGMSLKLLYRARYLLVLTCGEDHPEVALIDSNISLILHALGEYELSL 1242

Query: 69   RYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEED 128
            R+++ ALK N +  G + +  AV YH +A   +CMG F+ +  +EK+TY I   QLGE+ 
Sbjct: 1243 RFIEHALKLNLKYFGNKAMHVAVSYHLMARTQSCMGDFRSALNNEKETYSIYKSQLGEKH 1302

Query: 129  SRTRDSENWMKTFKMREMNAQKQ 152
             +TRDS   ++    + +  Q++
Sbjct: 1303 EKTRDSAECLRLLTQQAVLLQRK 1325

[Close]

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot
Match: Q17N71 (Clustered mitochondria protein homolog OS=Aedes aegypti OX=7159 GN=AAEL000794 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-16
Identity = 46/143 (32.17%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 9    YGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTAL 68
            Y  +AL+    +Q   AL+ + RA  L ++  G +HPD+A    N++++   +G+   +L
Sbjct: 1174 YAPLALYCFANSQISTALKLLYRARYLATIVCGENHPDIALLDSNISLILHAVGEYELSL 1233

Query: 69   RYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEED 128
            R+L+ AL  N +  GE+ ++ AV YH +A   +CMG F+ +  +EK+TY I  +QLGE  
Sbjct: 1234 RFLEHALALNIKYYGEKSLKVAVSYHLVARTQSCMGDFRSALNNEKETYAIYKQQLGETH 1293

Query: 129  SRTRDSENWMKTFKMREMNAQKQ 152
             +T++S   ++    + +  QK+
Sbjct: 1294 EKTQESSECLRHLTQQAVVLQKK 1316

[Close]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL
Match: A0A1S3CFI1 (Clustered mitochondria protein homolog OS=Cucumis melo OX=3656 GN=LOC103500303 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.8e-156
Identity = 300/319 (94.04%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1108 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1167

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1168 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1227

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQ LNAASAQKAID+LKSHPDLIQAFQAAAVAG
Sbjct: 1228 DSRTRDSENWMKTFKMREVQMNAQKQKGQALNAASAQKAIDLLKSHPDLIQAFQAAAVAG 1287

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1288 GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1347

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMTPDA D+SETDGEKK+VNTN SN+T VDGKQE       QAPVGL
Sbjct: 1348 MPPLTQLLNIINSGMTPDAVDSSETDGEKKEVNTNLSNNTPVDGKQE-------QAPVGL 1407

Query: 308  GSGLASLDTKKQRPKSKAA 325
            GSGLASLD KKQ+PKSKAA
Sbjct: 1408 GSGLASLDAKKQKPKSKAA 1419

[Close]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL
Match: A0A6J1DH15 (Clustered mitochondria protein homolog OS=Momordica charantia OX=3673 GN=LOC111020372 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.6e-156
Identity = 298/320 (93.12%), Postives = 305/320 (95.31%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1097 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1156

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1157 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1216

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAA+AG
Sbjct: 1217 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAIAG 1276

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            G   S G  INKSLNAA++GE LPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1277 GSGSSGGGAINKSLNAAVMGETLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1336

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMTPDAAD+SETDGEKK+ NTN SND QVDGK++QLPSVQDQAPVGL
Sbjct: 1337 MPPLTQLLNIINSGMTPDAADSSETDGEKKEANTNPSND-QVDGKRDQLPSVQDQAPVGL 1396

Query: 308  GSGLASLDTKKQRPKSKAAA 326
            GS L SLD KKQRPKSKAAA
Sbjct: 1397 GSSLVSLDAKKQRPKSKAAA 1415

[Close]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL
Match: A0A6J1GAC4 (Clustered mitochondria protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452223 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.2e-155
Identity = 297/320 (92.81%), Postives = 305/320 (95.31%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1094 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1153

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1154 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1213

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA 
Sbjct: 1214 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA- 1273

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSG  +NKSLNA++IGE LPRGRGVDERAARAAAE RKKAAARGLLIRQPGVPVQA
Sbjct: 1274 GGSGSSGGAMNKSLNASMIGEPLPRGRGVDERAARAAAEARKKAAARGLLIRQPGVPVQA 1333

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPP+TQLLNIINSGMTPDAA  + TDGEKKD+N N SN+TQVDGKQ+QLPS QDQAPVGL
Sbjct: 1334 MPPITQLLNIINSGMTPDAAAGNVTDGEKKDINANLSNNTQVDGKQDQLPSAQDQAPVGL 1393

Query: 308  GSGLASLDTKKQRPKSKAAA 326
            GS LASLD KKQRPKSKAAA
Sbjct: 1394 GSSLASLDAKKQRPKSKAAA 1412

[Close]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL
Match: A0A0A0L9W0 (Clustered mitochondria protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G698540 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.2e-155
Identity = 298/319 (93.42%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1098 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1157

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1158 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1217

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQ LNAASAQKAID+LKSHPDLIQAFQAAAVAG
Sbjct: 1218 DSRTRDSENWMKTFKMREVQMNAQKQKGQALNAASAQKAIDLLKSHPDLIQAFQAAAVAG 1277

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSGAP+NKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1278 GGSGSSGAPMNKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1337

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMT +A DNSETDGEKK+VNTN SN+T VDGKQE       QAPVGL
Sbjct: 1338 MPPLTQLLNIINSGMTSEAVDNSETDGEKKEVNTNPSNNTLVDGKQE-------QAPVGL 1397

Query: 308  GSGLASLDTKKQRPKSKAA 325
            GSGLASLD KKQ+PKSKAA
Sbjct: 1398 GSGLASLDAKKQKPKSKAA 1409

[Close]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL
Match: A0A6J1KGK4 (Clustered mitochondria protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111493033 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154
Identity = 299/321 (93.15%), Postives = 306/321 (95.33%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1094 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1153

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1154 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1213

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA 
Sbjct: 1214 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA- 1273

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSG  +NKSLNA+IIGE LPRGRGVDERAARAAAE RKKAAARGLLIRQPGVPVQA
Sbjct: 1274 GGSGSSGGAMNKSLNASIIGEPLPRGRGVDERAARAAAEARKKAAARGLLIRQPGVPVQA 1333

Query: 248  MPPLTQLLNIINSGMTPD-AADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            MPP+TQLLNIINSGMTPD AAD++ TDGEKKDVN N SN+TQVDGK +QLPS QDQAPVG
Sbjct: 1334 MPPITQLLNIINSGMTPDAAADSNVTDGEKKDVNANLSNNTQVDGKPDQLPSAQDQAPVG 1393

Query: 308  LGSGLASLDTKKQRPKSKAAA 326
            LGS LASLD KKQRPKSKAAA
Sbjct: 1394 LGSSLASLDAKKQRPKSKAAA 1413

[Close]

BLAST of Lsi03G012240 vs. NCBI nr
Match: XP_038903349.1 (clustered mitochondria protein [Benincasa hispida])

HSP 1 Score: 567.4 bits (1461), Expect = 8.0e-158
Identity = 304/321 (94.70%), Postives = 311/321 (96.88%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1096 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1155

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1156 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1215

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG
Sbjct: 1216 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 1275

Query: 188  GGSGSS-GAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQ 247
            GGSGSS G PINKSLNAA+IGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQ
Sbjct: 1276 GGSGSSGGGPINKSLNAAVIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQ 1335

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQ-APV 307
            AMPPLTQLLNIINSGMTPDA D+SETDG+KK+V+TN SN+TQVDGKQ+Q PS QDQ APV
Sbjct: 1336 AMPPLTQLLNIINSGMTPDAGDSSETDGKKKEVDTNPSNNTQVDGKQDQSPSAQDQAAPV 1395

Query: 308  GLGSGLASLDTKKQRPKSKAA 325
            GLGSGLASLD KKQRPKSKAA
Sbjct: 1396 GLGSGLASLDAKKQRPKSKAA 1416

[Close]

BLAST of Lsi03G012240 vs. NCBI nr
Match: XP_008461782.1 (PREDICTED: clustered mitochondria protein [Cucumis melo] >XP_008461783.1 PREDICTED: clustered mitochondria protein [Cucumis melo] >XP_008461784.1 PREDICTED: clustered mitochondria protein [Cucumis melo])

HSP 1 Score: 561.2 bits (1445), Expect = 5.7e-156
Identity = 300/319 (94.04%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1108 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1167

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1168 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1227

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQ LNAASAQKAID+LKSHPDLIQAFQAAAVAG
Sbjct: 1228 DSRTRDSENWMKTFKMREVQMNAQKQKGQALNAASAQKAIDLLKSHPDLIQAFQAAAVAG 1287

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1288 GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1347

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMTPDA D+SETDGEKK+VNTN SN+T VDGKQE       QAPVGL
Sbjct: 1348 MPPLTQLLNIINSGMTPDAVDSSETDGEKKEVNTNLSNNTPVDGKQE-------QAPVGL 1407

Query: 308  GSGLASLDTKKQRPKSKAA 325
            GSGLASLD KKQ+PKSKAA
Sbjct: 1408 GSGLASLDAKKQKPKSKAA 1419

[Close]

BLAST of Lsi03G012240 vs. NCBI nr
Match: XP_022152716.1 (clustered mitochondria protein [Momordica charantia] >XP_022152717.1 clustered mitochondria protein [Momordica charantia])

HSP 1 Score: 560.8 bits (1444), Expect = 7.5e-156
Identity = 298/320 (93.12%), Postives = 305/320 (95.31%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1097 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1156

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1157 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1216

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAA+AG
Sbjct: 1217 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAIAG 1276

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            G   S G  INKSLNAA++GE LPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1277 GSGSSGGGAINKSLNAAVMGETLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1336

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMTPDAAD+SETDGEKK+ NTN SND QVDGK++QLPSVQDQAPVGL
Sbjct: 1337 MPPLTQLLNIINSGMTPDAADSSETDGEKKEANTNPSND-QVDGKRDQLPSVQDQAPVGL 1396

Query: 308  GSGLASLDTKKQRPKSKAAA 326
            GS L SLD KKQRPKSKAAA
Sbjct: 1397 GSSLVSLDAKKQRPKSKAAA 1415

[Close]

BLAST of Lsi03G012240 vs. NCBI nr
Match: KGN58613.1 (hypothetical protein Csa_002644 [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 1.1e-154
Identity = 298/319 (93.42%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1098 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1157

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1158 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1217

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQ LNAASAQKAID+LKSHPDLIQAFQAAAVAG
Sbjct: 1218 DSRTRDSENWMKTFKMREVQMNAQKQKGQALNAASAQKAIDLLKSHPDLIQAFQAAAVAG 1277

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSGAP+NKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA
Sbjct: 1278 GGSGSSGAPMNKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 1337

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPPLTQLLNIINSGMT +A DNSETDGEKK+VNTN SN+T VDGKQE       QAPVGL
Sbjct: 1338 MPPLTQLLNIINSGMTSEAVDNSETDGEKKEVNTNPSNNTLVDGKQE-------QAPVGL 1397

Query: 308  GSGLASLDTKKQRPKSKAA 325
            GSGLASLD KKQ+PKSKAA
Sbjct: 1398 GSGLASLDAKKQKPKSKAA 1409

[Close]

BLAST of Lsi03G012240 vs. NCBI nr
Match: XP_022948592.1 (clustered mitochondria protein-like [Cucurbita moschata] >XP_022948594.1 clustered mitochondria protein-like [Cucurbita moschata])

HSP 1 Score: 557.0 bits (1434), Expect = 1.1e-154
Identity = 297/320 (92.81%), Postives = 305/320 (95.31%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA
Sbjct: 1094 SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 1153

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE
Sbjct: 1154 LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 1213

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDSENWMKTFKMRE  MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA 
Sbjct: 1214 DSRTRDSENWMKTFKMREVQMNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVA- 1273

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIRQPGVPVQA 247
            GGSGSSG  +NKSLNA++IGE LPRGRGVDERAARAAAE RKKAAARGLLIRQPGVPVQA
Sbjct: 1274 GGSGSSGGAMNKSLNASMIGEPLPRGRGVDERAARAAAEARKKAAARGLLIRQPGVPVQA 1333

Query: 248  MPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVGL 307
            MPP+TQLLNIINSGMTPDAA  + TDGEKKD+N N SN+TQVDGKQ+QLPS QDQAPVGL
Sbjct: 1334 MPPITQLLNIINSGMTPDAAAGNVTDGEKKDINANLSNNTQVDGKQDQLPSAQDQAPVGL 1393

Query: 308  GSGLASLDTKKQRPKSKAAA 326
            GS LASLD KKQRPKSKAAA
Sbjct: 1394 GSSLASLDAKKQRPKSKAAA 1412

[Close]

BLAST of Lsi03G012240 vs. TAIR 10
Match: AT3G52140.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 408.7 bits (1049), Expect = 4.4e-114
Identity = 227/316 (71.84%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELAL++M RALLLL LSSGPDHPDVAATFINVAMMYQD+GKM+TA
Sbjct: 1107 SYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTA 1166

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLG EHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLG++
Sbjct: 1167 LRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDD 1226

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDS NWMKTFKMRE  M AQKQKGQ  NAA+ QKAID+LK+HPDLI AFQ AA  G
Sbjct: 1227 DSRTRDSLNWMKTFKMRELQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATG 1286

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIR-QPGVPVQ 247
                        +LN+A++GE  PRGRG DERAARAAAEVRKKAAA+GLL+R Q GVPVQ
Sbjct: 1287 R---------TNALNSAVLGETQPRGRGFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQ 1346

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            AMPPL+QL N+IN+     A  +SE  GE  +       ++  +GK E L      AP G
Sbjct: 1347 AMPPLSQLQNMINT-----ATVSSEKGGENGEAKVQEKKESSENGKTENL------APAG 1402

Query: 308  LGSGLASLDTKKQRPK 321
            LG+GL SLD KKQ+ K
Sbjct: 1407 LGAGLTSLDKKKQKAK 1402

[Close]

BLAST of Lsi03G012240 vs. TAIR 10
Match: AT3G52140.2 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 408.7 bits (1049), Expect = 4.4e-114
Identity = 227/316 (71.84%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELAL++M RALLLL LSSGPDHPDVAATFINVAMMYQD+GKM+TA
Sbjct: 1111 SYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTA 1170

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLG EHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLG++
Sbjct: 1171 LRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDD 1230

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDS NWMKTFKMRE  M AQKQKGQ  NAA+ QKAID+LK+HPDLI AFQ AA  G
Sbjct: 1231 DSRTRDSLNWMKTFKMRELQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATG 1290

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIR-QPGVPVQ 247
                        +LN+A++GE  PRGRG DERAARAAAEVRKKAAA+GLL+R Q GVPVQ
Sbjct: 1291 R---------TNALNSAVLGETQPRGRGFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQ 1350

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            AMPPL+QL N+IN+     A  +SE  GE  +       ++  +GK E L      AP G
Sbjct: 1351 AMPPLSQLQNMINT-----ATVSSEKGGENGEAKVQEKKESSENGKTENL------APAG 1406

Query: 308  LGSGLASLDTKKQRPK 321
            LG+GL SLD KKQ+ K
Sbjct: 1411 LGAGLTSLDKKKQKAK 1406

[Close]

BLAST of Lsi03G012240 vs. TAIR 10
Match: AT3G52140.3 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 408.7 bits (1049), Expect = 4.4e-114
Identity = 227/316 (71.84%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELAL++M RALLLL LSSGPDHPDVAATFINVAMMYQD+GKM+TA
Sbjct: 1100 SYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTA 1159

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLG EHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLG++
Sbjct: 1160 LRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDD 1219

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDS NWMKTFKMRE  M AQKQKGQ  NAA+ QKAID+LK+HPDLI AFQ AA  G
Sbjct: 1220 DSRTRDSLNWMKTFKMRELQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATG 1279

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIR-QPGVPVQ 247
                        +LN+A++GE  PRGRG DERAARAAAEVRKKAAA+GLL+R Q GVPVQ
Sbjct: 1280 R---------TNALNSAVLGETQPRGRGFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQ 1339

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            AMPPL+QL N+IN+     A  +SE  GE  +       ++  +GK E L      AP G
Sbjct: 1340 AMPPLSQLQNMINT-----ATVSSEKGGENGEAKVQEKKESSENGKTENL------APAG 1395

Query: 308  LGSGLASLDTKKQRPK 321
            LG+GL SLD KKQ+ K
Sbjct: 1400 LGAGLTSLDKKKQKAK 1395

[Close]

BLAST of Lsi03G012240 vs. TAIR 10
Match: AT3G52140.4 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 408.7 bits (1049), Expect = 4.4e-114
Identity = 227/316 (71.84%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYGNMALFYHGLNQTELAL++M RALLLL LSSGPDHPDVAATFINVAMMYQD+GKM+TA
Sbjct: 1123 SYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTA 1182

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYLQEALKKNERLLG EHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLG++
Sbjct: 1183 LRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDD 1242

Query: 128  DSRTRDSENWMKTFKMRE--MNAQKQKGQTLNAASAQKAIDILKSHPDLIQAFQAAAVAG 187
            DSRTRDS NWMKTFKMRE  M AQKQKGQ  NAA+ QKAID+LK+HPDLI AFQ AA  G
Sbjct: 1243 DSRTRDSLNWMKTFKMRELQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATG 1302

Query: 188  GGSGSSGAPINKSLNAAIIGENLPRGRGVDERAARAAAEVRKKAAARGLLIR-QPGVPVQ 247
                        +LN+A++GE  PRGRG DERAARAAAEVRKKAAA+GLL+R Q GVPVQ
Sbjct: 1303 R---------TNALNSAVLGETQPRGRGFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQ 1362

Query: 248  AMPPLTQLLNIINSGMTPDAADNSETDGEKKDVNTNASNDTQVDGKQEQLPSVQDQAPVG 307
            AMPPL+QL N+IN+     A  +SE  GE  +       ++  +GK E L      AP G
Sbjct: 1363 AMPPLSQLQNMINT-----ATVSSEKGGENGEAKVQEKKESSENGKTENL------APAG 1418

Query: 308  LGSGLASLDTKKQRPK 321
            LG+GL SLD KKQ+ K
Sbjct: 1423 LGAGLTSLDKKKQKAK 1418

[Close]

BLAST of Lsi03G012240 vs. TAIR 10
Match: AT4G28080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.4e-37
Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = 0


Query: 8    SYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTA 67
            SYG++A+FY+ L  TELAL++++RAL LL L+ GP HP+ AAT+INVAMM + +   + A
Sbjct: 978  SYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGMKNAHVA 1037

Query: 68   LRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEE 127
            LRYL EALK N+RLLG +HIQTA  YHA+AIA + M A+ LS QHE+ T  IL  +LG E
Sbjct: 1038 LRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMDAYSLSVQHEQTTLQILQAKLGPE 1097

Query: 128  DSRTRDSENWMKTFKMREMNAQK 151
            D RT+D+  W++ F+ + +  Q+
Sbjct: 1098 DLRTQDAAAWLEYFESKALEQQE 1120

The following BLAST results are available for this feature:

BLAST of Lsi03G012240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J5S1	6.2e-113	71.84	Clustered mitochondria protein OS=Arabidopsis thaliana OX=3702 GN=FMT PE=2 SV=1	[more]
F4JKH6	6.2e-36	53.15	Protein TSS OS=Arabidopsis thaliana OX=3702 GN=TSS PE=1 SV=1	[more]
B4GAM1	6.4e-17	32.17	Protein clueless OS=Drosophila persimilis OX=7234 GN=clu PE=3 SV=1	[more]
Q291J5	6.4e-17	32.17	Protein clueless OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=clu PE=3 ...	[more]
Q17N71	2.4e-16	32.17	Clustered mitochondria protein homolog OS=Aedes aegypti OX=7159 GN=AAEL000794 PE...	[more]

BLAST of Lsi03G012240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFI1	2.8e-156	94.04	Clustered mitochondria protein homolog OS=Cucumis melo OX=3656 GN=LOC103500303 P...	[more]
A0A6J1DH15	3.6e-156	93.13	Clustered mitochondria protein homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1GAC4	5.2e-155	92.81	Clustered mitochondria protein homolog OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0L9W0	5.2e-155	93.42	Clustered mitochondria protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G69854...	[more]
A0A6J1KGK4	2.0e-154	93.15	Clustered mitochondria protein homolog OS=Cucurbita maxima OX=3661 GN=LOC1114930...	[more]

BLAST of Lsi03G012240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903349.1	8.0e-158	94.70	clustered mitochondria protein [Benincasa hispida]	[more]
XP_008461782.1	5.7e-156	94.04	PREDICTED: clustered mitochondria protein [Cucumis melo] >XP_008461783.1 PREDICT...	[more]
XP_022152716.1	7.5e-156	93.13	clustered mitochondria protein [Momordica charantia] >XP_022152717.1 clustered m...	[more]
KGN58613.1	1.1e-154	93.42	hypothetical protein Csa_002644 [Cucumis sativus]	[more]
XP_022948592.1	1.1e-154	92.81	clustered mitochondria protein-like [Cucurbita moschata] >XP_022948594.1 cluster...	[more]

BLAST of Lsi03G012240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52140.1	4.4e-114	71.84	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G52140.2	4.4e-114	71.84	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G52140.3	4.4e-114	71.84	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G52140.4	4.4e-114	71.84	tetratricopeptide repeat (TPR)-containing protein	[more]
AT4G28080.1	4.4e-37	53.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 48..81 e-value: 0.36 score: 19.9 coord: 6..39 e-value: 110.0 score: 5.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 48..81 score: 8.7619
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 6..181 e-value: 3.8E-26 score: 93.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 8..119
None	No IPR available	PFAM	PF13424	TPR_12	coord: 7..76 e-value: 3.2E-13 score: 49.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..300
None	No IPR available	PANTHER	PTHR12601:SF6	CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG	coord: 7..230
IPR027523	CLU domain containing protein	PANTHER	PTHR12601	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3	coord: 7..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G012240.1	Lsi03G012240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048312	intracellular distribution of mitochondria
biological_process	GO:0010636	positive regulation of mitochondrial fusion
biological_process	GO:0006996	organelle organization
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding