Lsi03G010820 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010820
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	indole-3-acetic acid-induced protein ARG2-like
Location	chr03: 20689922 .. 20696614 (+)
RNA-Seq Expression	Lsi03G010820
Synteny	Lsi03G010820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCTAAATCTGAAAAAGAAAAGAAAATAACAGGAAGAAAAGAGCATACGCATTATCTGAAATGCAAAGAAAAAAATGGAGAATTTAATTTAAACGTCATAACTTTGAAGAAAAAAGAATGAAAAATCTAACCTATTTTAAACACACAAGGAAAAATGATTTGGTCAAATAACTAGGGTTATTCATGGTTGGGTCAGACCCGACCCAATTATTTAAATTGTAATTTACTTCAACCCGAATATCCCTTATATATTATGAACTCAATTTAGTCCAACTATAAAACATGTGGGTTAGGTTTGTTTGGGTAACTCAAGTAATCTTAGGGTCTGTATGGTAGGATATCTGAAAACGAAAATTTGAAAACACTAGAGGTTGAAAGAAAACAGAGTCGTATTTCATATTTTCATACATGTGTTTAGTAGTAGATTGAAAAATTAGATTATATTTAAACAATTTTTTTAAATGTGCCCATTTAGTTGTAAAAGTAGTATGGAATATAAACTATTATTATTTAATTTATGAATAATGTTAAAAAAATAACAATAATTTTATAATATTATATCATTTATAATATATTACATAATACATATTTTAATTTTAAAAAATAATTGAATTTATAATATAATATATTTCTAAAAAATTTATCTTTGTTCAGTATGATTATGCATTTAAAATTTAAATTCAAAATTTGGATTAATTAAAAACATAAAAATGGAATTTCAACTGTTTGGATTAATCTAAAATAGTATAAAATAAAATGTGGATTAAACTACACTAATCATTTTATCTTTTCTAAAAACGAAAGTGAAATGTTAATCACTAAACATCTATTTATTTATTTTCAAATATAGAATTGATGGGTAATGCAATCTTAATTTATATTATGAAAAAGTATTTTTTTAATTGTTCGATAACAAATAATCTAAAAAAATGTATTAACTATATGTATTAAATAGGTAAAGGAAATACATTTAGACTTAATAATATATGTTTGGATTGGTTCCATTGAATCCAATAATTTAATTTTAGATAAACTCATGAATCGTTCTAACCAATACAATACTGGTTTAATTGAACCCAGTCCAACTCGAGTTGAGTTTGTTAGAAGAGAAAAAGGTGTAGACGACACAAATGTGGAGAAAGTGATACATTGATTCAACAAAACATGCCTTTATATAGGCTTACAAAATATAACCATAAAATTTCAATGGTTAAGAAATCATAAATATTACTTAATTCTCATCACTTCTAAAACTCCCAAAGAACTCAATGGACACTATTGATTACAAAAAATGAAAAGTTACAAATCAAGTTTAATACTAAAACTTCTATTATTCTAATTAATATTGTAACCTTTCATATTCTTAACATCCCTCCCTAAACTTGATTTGTTACACCAAGTAAATTCTTCATTTTGATGAAAGTCTCCAACTTGATGGGCTTTGTGAAAATGTCTGCCACTTGGTCTTGTGACTTGACATATTTGAGTTCTACTTTTTTCTTCGTAATGCAATCCTGAATGTAATGAAATCGGGTATCAATGTGCTTTCTCCTTCCATGAAATACCGGATTTTTGGGTAAGGCAATGACCGATTTATTGTCAACAAAAATCTCCATTAGATCCTCTATTTGAAACTTCAACTCCTTCATTAAGTTTCCTTAGCTAAATTGCATGACATACACAAGAAGTTGCTGCTACTACATACTCTGCCTCACATGTTGATAATGTGACTATGGGTTATTTTTTTTTGACATTCATGTGAATGTCGTTTCACCAATAAAAAAACACAAACCCCGTAGTGTTCTTCTGATAATCCAAATCATTATCATAATAACCAACAATATCAAAATTTCTAGAAGAGACATAGGAAAGACCATACCCAATAGTCCCTTTGATATAGCAAGTATCCTCTTTGCCATTTTACAATGTGTTGTTGTCGGCTCCTCCACAAATTGACTAATAATTCCAACTGAATAAAGAATATCCGGTCTTGTGCATGTCAAGTATCTCAAACTTCCAACCAAGCTTTTGAAATATGTAGAATCTACCTTCTCTCCTCCATTTTGAGTAGTGATTTTGACTCCACATTCCATTGGTGTTCCAACCGGATTAACATCATCCATATTGAACCTTTTGAGCATTTCTCTAGCATAGCCCTCTTGAGATATAAAAATTCCATATTCACTTTGTTTGACCTCGATCCCAAGATAATAACTCATGAGACCAATGTCCGTCATTTCAAACTCCTTTGTCATCTCCCTTTTAAATTCATCAAACATGCAAGGATCGTTTTCGGTAAATATTAAATCGTCAACATATAACAAATGATTAATATGCTTTCACCTTATATTTTGATGTATAGGGCATGCTCATAAGGACACTTCATATACTTCTTCTCTCTAAAATACTTGCCAATCCTCGAATTACATGCTCTCGGTGCTTGCTTCAAACCGTAAAGGGCATTCTTCAATCGAAGTACTTTATCTTCTTCACCCTTGACTTCATAGTCCAACGGTTGTTCCACATAGACCTCCTCCTCAAGAATTCCGTTCAAAAATGCCGATTTGACATCCATTTGATGTATCTTCTAATGATTATGGGCTGCCAAAGCAATAATCAAACGAATACTTTCAAGGCGAACAACGGGGGCAAATACCTCATCATAGTTGATGCCATATTGTTGACTATATTCTTTCACTACTAGTCTCGCTTTGTGCCTCTCAACTTCGCCATTGGTCTTTCTCTTTGTCTTGTAAACCCACTTCACTCCAATTGGTTTTTGTCCTTTTGGAAGCTTGGTCAACTCCCATATGTTGTTTTTCTCCATTGCTCGAATTTCTTCATCCATTGCATCCTTCCATTTTTTATTTGGCTTCTTGGAAATTAATGAGCTCACAATCACCAAAAAGACAATAGAAAATTATGTCATTTTGATTTTCGCTTACCTCATTAAGTTCTTGTAAACTTTAGGTTCCTCTTGGGCCAATTTCATTCTCCGAATCACTGGAAAGTGCCTCCATTCCATTGGATGATGCATTAGATGACTGATCGGTTGATTGAGTTAATATTGGAATAGGAAAAACTTCACCCCTTTCCTCCCTGGTTGGCTCATCGTCTTCCTTAAAGTATGGAAGAAAATCATACTCCTCCATCTATATATTCCAATCCCAAGAAGCTTCCTCATCAAAAACAACATCACGACTAATAATTACCTTCCCATTCAAAAGATTGTAGAGGCGACAACCCTTTGAACTTGCATCATAGCCAATGAATATGAGTTTCTCGCTTCGATTGTCAAGCTTGGTCCTTTCTTCCTTTGGCACATGAGCATATGCAATACTTCCAAACACTTTAAATTGACCAATTCCAAGCTTTCCTCTGTTCCATGCTTCTTGAGGCGTCTTGACAAGTACACTTTTGGTTGGTGCTCAATTTGTTAAATAGACCGCACAAGCTATGGCCTCTGCCCAAAATTTCTTAGGCATCTTTTTCGTCTTCAACATGCTTCTTGCCATGTTCAAGATTGTTCGATTCTTTCTCTCTGTCACGCCATTTTGTTGCAGTGTCCTTGGCACTGTTAATGGGCATCGAATGTCTTTTTCATCACAAAATTGTTTGAACTCATTTGATGTGAATTCACCATCTCGATCTGTTCTCATGGTCTTAATGTAAAATTTCTTTCATTCTCCACACGTGCCTTAAATTTCTTGAAGATTTCAAATACTTCCGATTTTTCCTTCAAAAAGTACACCCATGTTTTTCTAGAAAAATCATCAATAAGGAGAAGGAAGTATTTACTTTTACCATGAGACTCCGGTTCGATTGCTTTGCACACATCGGCATGGGATGAGTTCTAGAGGTTTGTTGGCTCTTGTCGTAGACTCCTTTGGAAAAATACTCCGATGATGTTTTTCCAAGTAGACACCCTTCACACACTTGGTTCGGCTTCTGAATATGCGGTAAATCCTGCACCATCTTCTTCTTCGACAAGTCTTCTAGACTTCCAAAATTGAGGTGCCCAAACCGTAGATGCCATAGCCAAGAAACATCCTCATAACACATCTTCAAGCATTTTGGAACATCATTACATATATTCAAAGGAAACATTCGATTTTTTGTCATGATGACTTTAGAAACAAGTCTCTCATGATTATCTCTCAAATACAAACAATTGTTTTTCATTTGAACTTCAAAACCTTTCTCTAACAATTTTCGTACACTCAATATATTGTTTTGTTATATATTTGAAATGTAATAAACATTTGTAATATATTGATTTTCTCCATTTTTCAACCGAATGAGAATTTTACCTATTCCTTTGATGGCGGCCAAAGAATTGTCTCCAAAGACAATATTACTTTTTTTCCATCTCGTTCAACTCTACAAACATCTCCCAGTTCTCACACATGTGATTTGAGGCTTCGGTGTTAAGATACCACTTGCTATCTTGACTCTTTTCTTCTTCCTTTGAAATCATAAATAAGGTTTTATTCTCCTCCGCATAATTGGACTGCCTTTCATGGCCTTTGGATGTGTTAGCGATTGACCGGTCACATGTTGCTTCCGATTGATCGACTCTGATTGAGATGAATAACTCTCATTCGCATAATGTCCATATTTATTGCAATTATAACATTTTACTTGAGATTTATCTCTCCCGAACCTTCCACCACGTCTTCCACGGCCTCGACCTCATCTTCCTCTTGAGGATTCATTTAAGTTTTGAGAAACGTCGGTGTTGGATTCACCTTTTCCACCATGGCCTCTTCCACTATGACCTCAGCTTCCACGTCCACGACTATTCTCCTCCTTGAGTTTGAGTTGAAGAAGTTGTTCAATGCTCCGTTTGCTCCACATTTCTTTTCCTTTTCTCCTCATAGGCTTGTAATGAGCCTATAAATTGTTCAATCGTCATGGTCTTAAGATCTTTTGTCTCTTCGATTGTCGTGACAATGATCTCAAACTTAGTATTTGGACTCTGTAAAATCTTTTCCATGACACAAATATTGACGATTTCTTCACCGTTCCATCTCATTTGGTTGACAACAGTCATAATGTTGGTGTGATATTCGGCTATCACCTCCGCCTCCTTCATCTGTAATGATTCAAACTCACCACGTAAAGTTTGTAATCGTACCTTTTTAACACGATCAGCTCCTCTATGAGTCGATTGGAGCTTGTCCCATGCTGCCTTTGACGTCTCGGCATCGCAGATAGTCTGAAATGTGTCTTTGTCAACTGATTGGTACAAGATATAGAGGGTCTTCTTGTCCTTCTTTCTTGTCTCCTTTAGCGCGTCTCTTTGCTCTTGATTAGACCCAGCTTCCACCTCTTGAAAACCGTTTTACACAATCTCCCACATGTCTTGTGCTCCTAGTAATACTTTTATCTTGATGCTCCAACTGTCATAGTTAAGCTTGGTAAGCATCGGTAATTGAAGCAAACACATCCCACCGTTGGCCATTTTTCTCTCAAATTTCTTGCAATGCTCTGATACCACTTTGCTAGAAGAGAAAAAAGTGTAGATGACACAAATGTGGAGAAAGTGATACATTGATTCAACAAAACATGCCTTTATATAGGCTTACAAAATATAACTATAGAATTTCAATGGTTAAGAAATCATAAAATATTACTTAACAAAAACTCCTAAAAAATTCAATAGACACTATTGGTTACAAAAATCAAAAGTGACAATTTAAGTTTAATACTAAAACTTCTATTATTCTAATTAATATTGTAACCTTTCATATTCTCAATAGGATTGATCGAATTAGTCCAAATCACTATATTTCTTTGAACACCCCTACAAATAAAGAAAAATATTTAAAAAGAGTAAAAGCGATATCCTGAAACAAAATTCAAACGGAACAAGAAACCAATTAGGAAAAGGAATATATGATAGAATGAATCATATAATTGGAAATATTTTCTAAATTTGGTTAAATTCCGGTTTCCGTGTCACTTTTCCTATTTCCTAATTCCTTCTGTTTTTATATTTTCTTTTATATAAATCCTCATTCGGTCTTTCCATATTTCTCATACTCATATACTGTGAGAAACCGAGAGACGTAGAAAAAATAACGCTTTCCTTTTTCCCTCGTTTTTTACTTAAAATTTTCCCGAGAAACAATCAGAAAATTTCATCTGCAAAAGCAATTGACGATGGCTCGCTTATTCTCCGGCGTCAAGATCATGTCCAATCTCGTTCCTCATGGATTTTTTAACGCTCTCATCAGGTATTTAAAATATATCAAACATAAATAATACAAAATATTGCTTTTAAATTAATCTTTATAAAAGTAATTAAAAGAACGAAAACAAGAAATTTAGTCTTCATTTGATAAAATATTTAATTTTTTTAACGTACTGTTTTTTGTTATGCTTTTGAAATTTTACTGAAATTTAGTCATCAGGTATTTTAACGTGGTGTGCTTGGACAGGCGTGGATATACGGCGGAAGCAATGGCGGCGTCACAAAGAGTGGCGTCTTCCTCGGCGGCGGAAGGAGTTACGGCACGAAGCGACGGACTGATGAAGAAAGAAGCAGAAAGAAGTTCAGAGAAGGCGGCGTGGGTCCCAGATCCGGTTACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCGGTGGATCTTCGTGCTAAGCTATTGAAGCCGAGAAGAAATATAATCAATTGA

mRNA sequence

ATGAAAACAATCAGAAAATTTCATCTGCAAAAGCAATTGACGATGGCTCGCTTATTCTCCGGCGTCAAGATCATGTCCAATCTCGTTCCTCATGGATTTTTTAACGCTCTCATCAGGTATTTTAACGTGGTGTGCTTGGACAGGCGTGGATATACGGCGGAAGCAATGGCGGCGTCACAAAGAGTGGCGTCTTCCTCGGCGGCGGAAGGAGTTACGGCACGAAGCGACGGACTGATGAAGAAAGAAGCAGAAAGAAGTTCAGAGAAGGCGGCGTGGGTCCCAGATCCGGTTACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCGGTGGATCTTCGTGCTAAGCTATTGAAGCCGAGAAGAAATATAATCAATTGA

Coding sequence (CDS)

ATGAAAACAATCAGAAAATTTCATCTGCAAAAGCAATTGACGATGGCTCGCTTATTCTCCGGCGTCAAGATCATGTCCAATCTCGTTCCTCATGGATTTTTTAACGCTCTCATCAGGTATTTTAACGTGGTGTGCTTGGACAGGCGTGGATATACGGCGGAAGCAATGGCGGCGTCACAAAGAGTGGCGTCTTCCTCGGCGGCGGAAGGAGTTACGGCACGAAGCGACGGACTGATGAAGAAAGAAGCAGAAAGAAGTTCAGAGAAGGCGGCGTGGGTCCCAGATCCGGTTACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCGGTGGATCTTCGTGCTAAGCTATTGAAGCCGAGAAGAAATATAATCAATTGA

Protein sequence

MKTIRKFHLQKQLTMARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTARSDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNIIN

Homology

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BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-12
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  S VKI+S  V     NA+          RRGY A    A+Q   SS    G  A 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIF---------RRGYAA---TAAQGSVSSGGRSGAVA- 60

Query: 75  SDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
           S  + KK  E S++K +WVPDP TGYYRPE  ++EIDA +LRA LL  ++
Sbjct: 61  SAVMKKKGVEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNKQ 97

[Close]

BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 45/111 (40.54%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR F+ VK++S LV  GF N   R+         G+ A A A        ++  G    
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRH---------GFAAAAAATQSATRGGASIGGNMVP 60

Query: 75  SDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRN 126
             G   +E  R  EK +WVPDPVTGYYRPEN  +EID  D+RA +L  + N
Sbjct: 61  KSG---EEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKKFN 98

[Close]

BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09
Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  +  KI S        NA+          RRG+ A A  A     S S AE     
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVF---------RRGFAAAAKTALD--GSVSTAE----- 60

Query: 75  SDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
              + K+  E SSEKA WVPDP TGYYRPE  ++EID  +LRA LL  ++
Sbjct: 61  ---MKKRAGEASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNKQ 91

[Close]

BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-09
Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  S  K++   +  G +         V + RRGY+    AA         A G   R
Sbjct: 1   MARSVSSFKLLGASIFDGLY---------VSISRRGYSGAPPAAVTASFGRPGAMGKVER 60

Query: 75  SDGLMK-KEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR 124
            D + +   +E  +  +AW PDPVTGYYRPEN   EIDA +LR  LL  R
Sbjct: 61  RDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]

BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.2e-08
Identity = 43/110 (39.09%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  S  K +   V    F+AL      V + RRGY+    AA         A G   R
Sbjct: 1   MARSVSSFKFLGASV----FDAL-----YVSISRRGYSGAPPAAVTASFGRPGAMGKVER 60

Query: 75  SDGLMK-KEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR 124
              + +   +E  +  +AW PDPVTGYYRPEN   EIDA DLR  +L  R
Sbjct: 61  RYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHR 101

[Close]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL
Match: A0A6J1F2C1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441545 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 73/115 (63.48%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR FSGVKI+S LV  G   ALI         RRGYTAEAMAAS+R           AR
Sbjct: 1   MARFFSGVKIISGLVSDGLSEALI---------RRGYTAEAMAASKR----------AAR 60

Query: 75  SDGLMKK--EAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNII 128
            DG+MKK  +AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+PRR  I
Sbjct: 61  DDGMMKKGEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL
Match: A0A6J1J9I8 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482498 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.8e-25
Identity = 73/112 (65.18%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR FSGVKI S LV  G  NALI         RRGYTAEAMAASQR           AR
Sbjct: 1   MARFFSGVKITSGLVSDGLSNALI---------RRGYTAEAMAASQR----------AAR 60

Query: 75  SDGLMKKE--AERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
            DG+MKKE  AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA ++  RR
Sbjct: 61  DDGMMKKEEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMMLQRR 93

[Close]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL
Match: A0A6J1GAX2 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452505 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 62/88 (70.45%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 42  NVVCLDRRGYTAEAMAASQRVASSSAAEGVTARSDGLMKK-EAERSSEKAAWVPDPVTGY 101
           ++V L RRGY A A AASQRVAS +AAEGVTARS G++KK E ER +E AAW+PDPVTGY
Sbjct: 13  SLVSLIRRGYRAGATAASQRVASGTAAEGVTARSGGMIKKEEEERRTEMAAWIPDPVTGY 72

Query: 102 YRPENYADEIDAVDLRAKLLKPRRNIIN 129
           YRPENY + ID VDLRA LLKP+RN++N
Sbjct: 73  YRPENYTNVIDEVDLRAMLLKPKRNVMN 100

[Close]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL
Match: A0A1S4DZQ1 (indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103494762 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 17  RLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAE--AMAASQRVASSSAAEGV--T 76
           R  S VKI+  LV  GF NA+I         RRGYTAE  AMAAS+RV S+SA  GV   
Sbjct: 4   RFSSAVKIVPGLVLDGFLNAII---------RRGYTAEAMAMAASERVTSTSAGGGVLPA 63

Query: 77  ARSDGLMKK-EAERSSEK---AAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNIIN 129
           A SDG+MKK E+ERS+ +   AAW+PDPVTGYYRPENY DE+D VDLR KLLK RRN IN
Sbjct: 64  AGSDGVMKKEESERSTTEKAAAAWMPDPVTGYYRPENYVDEMDPVDLRDKLLKARRNTIN 114

[Close]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL
Match: A0A0A0KV78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001860 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21
Identity = 68/120 (56.67%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 17  RLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAE--AMAASQRVASSSAAEG---V 76
           R  SGVK++   V  GF NA++         RRGYTAE  AMAAS+R  +S+ A G    
Sbjct: 4   RFSSGVKVLPGFVFDGFLNAIV---------RRGYTAEPMAMAASERATTSTPAAGGVLP 63

Query: 77  TARSDGLM--KKEAERSSEKAA-WVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNIIN 129
             RSDG++  K+E+ERS+EKAA W+PDPVTG YRPE+  DE+DAVDLRAKLLKPRRN +N
Sbjct: 64  ATRSDGVIVEKEESERSTEKAAVWIPDPVTGCYRPESNMDEMDAVDLRAKLLKPRRNTVN 114

[Close]

BLAST of Lsi03G010820 vs. NCBI nr
Match: XP_038903721.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 7.5e-35
Identity = 89/115 (77.39%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MA  FSG KIMS+LVPHG F+AL          RRGYTAEAMAASQRVAS+SAAEG+ AR
Sbjct: 1   MACFFSG-KIMSSLVPHGSFHALF---------RRGYTAEAMAASQRVASTSAAEGIPAR 60

Query: 75  SDGLMKK-EAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNIIN 129
           S+G+MKK E+E S+EKAAWVPDPVTGYYRPENYAD IDAVDLRAKLLKPRRNIIN
Sbjct: 61  SNGMMKKEESETSTEKAAWVPDPVTGYYRPENYADVIDAVDLRAKLLKPRRNIIN 105

[Close]

BLAST of Lsi03G010820 vs. NCBI nr
Match: KAG7018001.1 (Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.9 bits (320), Expect = 6.4e-26
Identity = 74/115 (64.35%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR FSGVKI+S LV  G  NALI         RRGYTAEAMAAS+R           AR
Sbjct: 1   MARFFSGVKIISGLVSDGLSNALI---------RRGYTAEAMAASKR----------AAR 60

Query: 75  SDGLMKK--EAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNII 128
            DG+MKK  +AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+PRR  I
Sbjct: 61  DDGMMKKGEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of Lsi03G010820 vs. NCBI nr
Match: XP_023528769.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.5 bits (319), Expect = 8.3e-26
Identity = 75/115 (65.22%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  SGVKI+S LV  G  NALI         RRGYTAEAMAASQR           AR
Sbjct: 1   MARFCSGVKIISGLVSDGLSNALI---------RRGYTAEAMAASQR----------AAR 60

Query: 75  SDGLMKKE--AERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNII 128
            DG+MKKE  AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+PRR  I
Sbjct: 61  DDGMMKKEEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of Lsi03G010820 vs. NCBI nr
Match: XP_022934354.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-25
Identity = 73/115 (63.48%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR FSGVKI+S LV  G   ALI         RRGYTAEAMAAS+R           AR
Sbjct: 1   MARFFSGVKIISGLVSDGLSEALI---------RRGYTAEAMAASKR----------AAR 60

Query: 75  SDGLMKK--EAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRRNII 128
            DG+MKK  +AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+PRR  I
Sbjct: 61  DDGMMKKGEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of Lsi03G010820 vs. NCBI nr
Match: XP_022984078.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24
Identity = 73/112 (65.18%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR FSGVKI S LV  G  NALI         RRGYTAEAMAASQR           AR
Sbjct: 1   MARFFSGVKITSGLVSDGLSNALI---------RRGYTAEAMAASQR----------AAR 60

Query: 75  SDGLMKKE--AERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
            DG+MKKE  AERS EK AWVPDPVTGYYRPENY+DEIDAVDLRA ++  RR
Sbjct: 61  DDGMMKKEEQAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMMLQRR 93

[Close]

BLAST of Lsi03G010820 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  S VKI+S  V     NA+          RRGY A    A+Q   SS    G  A 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIF---------RRGYAA---TAAQGSVSSGGRSGAVA- 60

Query: 75  SDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
           S  + KK  E S++K +WVPDP TGYYRPE  ++EIDA +LRA LL  ++
Sbjct: 61  SAVMKKKGVEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNKQ 97

[Close]

BLAST of Lsi03G010820 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0


Query: 15  MARLFSGVKIMSNLVPHGFFNALIRYFNVVCLDRRGYTAEAMAASQRVASSSAAEGVTAR 74
           MAR  +  KI S        NA+          RRG+ A A  A     S S AE     
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVF---------RRGFAAAAKTALD--GSVSTAE----- 60

Query: 75  SDGLMKKEAERSSEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRR 125
              + K+  E SSEKA WVPDP TGYYRPE  ++EID  +LRA LL  ++
Sbjct: 61  ---MKKRAGEASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNKQ 91

[Close]

BLAST of Lsi03G010820 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 48  RRGYTAEAMAASQRVASSSAAEGVTARSDGLMKKEAERSSEKAAWVPDPVTGYYRPENYA 107
           +RGY A    A+Q   SS    G  A S  + KK  E S++K +WVPDP TGYYRPE  +
Sbjct: 6   KRGYAA---TAAQGSVSSGGRSGAVA-SAVMKKKGVEESTQKISWVPDPKTGYYRPETGS 65

Query: 108 DEIDAVDLRAKLLKPRR 125
           +EIDA +LRA LL  ++
Sbjct: 66  NEIDAAELRAALLNNKQ 78

[Close]

BLAST of Lsi03G010820 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 )

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 48  RRGYTAEAMAASQRVASSSAAEGVTAR-SDGLMKKEAERSSEKAAWVPDPVTGYYRPENY 107
           RR Y    +A SQ V ++  ++G + R   G M++       ++AW PDPVTGYYRP N 
Sbjct: 28  RRSY----VATSQNVTAAGLSKGGSTRVMVGKMEQRGLDQEAESAWGPDPVTGYYRPSNR 87

Query: 108 ADEIDAVDLRAKLLK 122
           A EID  +LR  LLK
Sbjct: 88  AAEIDPAELRELLLK 98

[Close]

BLAST of Lsi03G010820 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06
Identity = 19/30 (63.33%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 88  EKAAWVPDPVTGYYRPENYADEIDAVDLRA 118
           E+  W+PDP TGYYRP+N+A E+DAV+LR+
Sbjct: 82  EELWWMPDPQTGYYRPDNFARELDAVELRS 111

The following BLAST results are available for this feature:

BLAST of Lsi03G010820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WF6	3.2e-12	44.55	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
P32292	1.6e-11	40.54	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9SRX6	2.5e-09	40.91	Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2...	[more]
P46522	5.6e-09	37.27	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]
P46521	6.2e-08	39.09	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]

BLAST of Lsi03G010820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2C1	1.5e-25	63.48	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata ...	[more]
A0A6J1J9I8	5.8e-25	65.18	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita maxima OX...	[more]
A0A6J1GAX2	1.4e-23	70.45	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata ...	[more]
A0A1S4DZQ1	1.2e-22	61.67	indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KV78	3.0e-21	56.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001860 PE=4 SV=1	[more]

BLAST of Lsi03G010820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903721.1	7.5e-35	77.39	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]	[more]
KAG7018001.1	6.4e-26	64.35	Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp...	[more]
XP_023528769.1	8.3e-26	65.22	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp....	[more]
XP_022934354.1	3.2e-25	63.48	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]	[more]
XP_022984078.1	1.2e-24	65.18	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of Lsi03G010820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02380.1	2.3e-13	44.55	senescence-associated gene 21	[more]
AT1G02820.1	1.8e-10	40.91	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G02380.2	1.8e-10	48.05	senescence-associated gene 21	[more]
AT4G15910.1	1.1e-07	44.00	drought-induced 21	[more]
AT3G53770.1	2.7e-06	63.33	late embryogenesis abundant 3 (LEA3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 15..120 e-value: 2.8E-24 score: 85.6
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PANTHER	PTHR33509	LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED	coord: 15..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010820.1	Lsi03G010820.1	mRNA