Lsi03G010720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr03: 20546901 .. 20550105 (+)
RNA-Seq Expression	Lsi03G010720
Synteny	Lsi03G010720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAGACTAAGTATATAAAAGCCGTAGATTTTCCAGAATAATCTGTATATGAAATTAACAAAAAATACAAGCAATGGCAGAAATGTTGGAGATTCGAGGGAATTGGACTCATCTCCTTTCTCCTTCTTCTCTCTCGTTTTCTCTCTACAATTCGATCATGGCTTTCCATCTCTGAACCTTCCTTTCCATTCTTCCCCATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCTTGTACTCTCAAGCTCCATGGTTGGAGCCCTTTTCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCAGCTCCCACTAACGCTAAACCCTACTACTCTTCCACTCCCCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACTTGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTGCCGCTGGCTGTTACACGCGTCGGAGCTTCCGATTGATTGCTAGGAAGCGGCGGCGTCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACGAGACGGTGCTGCTCTGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCCAGTGGGGAGTTGTTTGTGAATGGAGATGCGAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGGTCCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGAGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCCAGATTGCTGTTGTGGGGTGAACGACTAGGAGGTTCATTTTCTTTCTCTTCTTCTCATCTTAAGAGATCTTAATAGTTAATCGCATCGATGGCTTAGACTAGACTACAATTTTAGTTTTAAATGTTGATGTTGGGCTGATAAGTCAGGACACAATGCTGTTATGACACTTGTTGGATATCTCCTTAGACACTTGTTTTTAGTAAAACAAATCCTGGGAGTGTTTCTAAAGCATATATTTATGGTTAAATTATAACAATACCATAAACTTTTGGTTACGTTCCATTCATTTATACCTTCGAATTTTGGAATTGTTCCAAAGAATAGATGTGAAATGTTAAATATATATATATATATATATATATATATATATATATATATATATTCCCCTAAAATAAACAATGGAAATTAATTTATTTGAACGTTTGTCACGTATGTCATTTGTGAATATACATGTGTTTCTTATAGAAAAAAAAAAAAAAAACTTATTTGCTAACTTTGAATTTTCGTATACGTGTAAAAAAGTTTATATTTTTTTCTTTATATCTGCCATCTCCTGTCCCAAATGTTTAAGAGGTGGTGTCTCAACGATGCATCCGTGTCTATCTGGCTTCTTAGATTTTGAGGTTTTTTTTAGCTAATCCTTCAAAATTGAAATGTTAACTTTGAATTTGACTTCCACGGTTCCTATCATATCATATTAACTAAAAGATAGATCCTTTAATCAGTTTGTTTTGAAGTGATAAACAAAATAGAGAGAAGAAGTGTACTAGGAGTTTGATACACCAGTAAAAAGAGGAATATTGGACAGTCATTTTATTGTCTGATTGTAAGCCGATGTTTGTCGAACATGTCACTTCAACCTTTAGCTAAGGATGTTTACAATAAGAGCTATTCAAATAGAGAGATGTAATCGAAAATTTTGAACTTTAGAAATTAATGTTGTAACTTAACGAAGCATGCTTTTGAGGGTTTATTTAAAACGTTTTATTTTGTGGGGAAAGCTAATGATCGAGGGATTTATAGCACCTTGATGGACAAGGTTAATGGCACTAGCTTCTAGACTGTAACCAGCTTGTGAAACTTGTCCATTTATTTTGTGGAGCATAATCTACATCTGAATTGAGTAGCTTTATGATCCTTTGATCTGACATTTAGCATTCTATGGTCTGGAAACTATATTCCTCTTAATTCATGGTTCCACATTGTTGTTCCCTTGAAAAGAGTTAATGGAGGTTTCTACTCCACGGCAGTCGACTCCATGTTTCACATTTGCATGTCAATGAAAGCTTCATCTCTGATGACATTAAATTGTGTTCTGCTCTTATTCTGGTTCTGTTCGCGGATTTGTTTAAAAAGATAGCACAACTTGTGATAAAAAATTGTGCTGTGTTCTTTGTACTTAAGATCACATAACCTCGAGGACAAATATTTTGGGACTGGCTCCGCAGTAGAATTAAGGTGTTGAGATAGATGATTTGTAGATGTAGTATTTTTGTTACATTCGGTTTTGAATACGCATCTTATCTTATCTGAGCATTTATATCATTCCTAACTTTTCATCTATGCTTTTGGTTTTAACAACTTTAGGCAATTTATGAGTAGATTTCATTGAAAGATGAGAACATAACTTATCATAGAAAATGCAGCAGTCGCCTCAATAAATGCCTCTTTGCTGTTGGTAGAACTTAACAAGTTCATTTACCTGTCTTCTTCCTTAAATGAATTTCTCTTGTGTAATCTGCATTTCCTACCTTCCTTTCGCCTGAAAACGACCTTTGGCATATCAATGACCAATGGGAAGATTAAACGTTTGATTTCGAATTTCTGATATGCACACATAGTCCCCTTTTTCTGGTTCAAAGTCCAAGTTAAGGAGATGATTGATATGTTCACATTCTATGCAGATTCTAGAATGGAAATTGTAGGAGAGAATACATTTGCAGATCAGAAATCACACCATAGATGCCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGAAGCAAACATCAAAACCGAGCGACGAACATTGTGAATACTCCTGATTCTGATGGGTCCCTACCTGCTGGTATGCCTCTGAGATCTGAATTTTTGTACTCCAAAGTAAAGGTATCCCCAGTTTTTAGAGTCTGCTTAAATTGCAGTTTACAGCATCTAGATTTTTCTTTCAAATTTTGTGGCCACCTATGATGCTTCTACAGCGAAGAAAACATAATCCCATTGCCAAATTATCTTTGATATTTTCTCAGCTTAAGAAGTTAAACTCTTTTGTATCTGTCTTGACAGAGCTGTGAAAAAGGCTTGGGTTCTTCTTGAGTCAACTTAG

mRNA sequence

ACTAGACTAAGTATATAAAAGCCGTAGATTTTCCAGAATAATCTGTATATGAAATTAACAAAAAATACAAGCAATGGCAGAAATGTTGGAGATTCGAGGGAATTGGACTCATCTCCTTTCTCCTTCTTCTCTCTCGTTTTCTCTCTACAATTCGATCATGGCTTTCCATCTCTGAACCTTCCTTTCCATTCTTCCCCATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCTTGTACTCTCAAGCTCCATGGTTGGAGCCCTTTTCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCAGCTCCCACTAACGCTAAACCCTACTACTCTTCCACTCCCCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACTTGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTGCCGCTGGCTGTTACACGCGTCGGAGCTTCCGATTGATTGCTAGGAAGCGGCGGCGTCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACGAGACGGTGCTGCTCTGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCCAGTGGGGAGTTGTTTGTGAATGGAGATGCGAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGGTCCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGAGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCCAGATTGCTGTTGTGGGGTGAACGACTAGGAGATTCTAGAATGGAAATTGTAGGAGAGAATACATTTGCAGATCAGAAATCACACCATAGATGCCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGAGCTGTGAAAAAGGCTTGGGTTCTTCTTGAGTCAACTTAG

Coding sequence (CDS)

ATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCTTGTACTCTCAAGCTCCATGGTTGGAGCCCTTTTCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCAGCTCCCACTAACGCTAAACCCTACTACTCTTCCACTCCCCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACTTGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTGCCGCTGGCTGTTACACGCGTCGGAGCTTCCGATTGATTGCTAGGAAGCGGCGGCGTCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACGAGACGGTGCTGCTCTGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCCAGTGGGGAGTTGTTTGTGAATGGAGATGCGAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGGTCCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGAGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCCAGATTGCTGTTGTGGGGTGAACGACTAGGAGATTCTAGAATGGAAATTGTAGGAGAGAATACATTTGCAGATCAGAAATCACACCATAGATGCCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGAGCTGTGAAAAAGGCTTGGGTTCTTCTTGAGTCAACTTAG

Protein sequence

MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNAKPYYSSTPLHTKRPCLSDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALRAVKKAWVLLEST

Homology

[Close]

BLAST of Lsi03G010720 vs. ExPASy TrEMBL
Match: A0A0A0KT54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.4e-134
Identity = 251/270 (92.96%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTH-SSAPTNAKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H +SAPTN+KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAID+SALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240
           GSGF  SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Lsi03G010720 vs. ExPASy TrEMBL
Match: A0A1S3BYD4 (uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.4e-134
Identity = 251/270 (92.96%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTH-SSAPTNAKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H +SAPTN+KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAID+SALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240
           GSGF  SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Lsi03G010720 vs. ExPASy TrEMBL
Match: A0A6J1DMG8 (uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022393 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.0e-131
Identity = 247/272 (90.81%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHL---PKTLDSDTHSSAPTNAKPYYSSTPLHTKRP 60
           MSRRALDSRQSI+SCTLKLH W PF L   PKTLDSD H+SAPTN+KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 61  CLSDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 120
           CLSDR TSF+VDAID+S LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 121 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 181 HLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240
             G     SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

[Close]

BLAST of Lsi03G010720 vs. ExPASy TrEMBL
Match: A0A6J1GCW8 (uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452804 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 250/274 (91.24%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFH----LPKTLDSDTHSSAPTNAKPYYSSTPLHTKR 60
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT +KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAID+S LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 D-HLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240
           D HLG GFG SNGG DAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 241 SRMEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           SRMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

[Close]

BLAST of Lsi03G010720 vs. ExPASy TrEMBL
Match: A0A6J1J7N4 (uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129
Identity = 245/272 (90.07%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNAKPYYSSTPLHTKRPCLS 60
           MSRRALDSR+SI SCTLKLHGW PF LPK LDSD H+SAPT+AKPYYSS+ LHTKRPCLS
Sbjct: 1   MSRRALDSRESIHSCTLKLHGWRPFQLPKALDSDAHTSAPTSAKPYYSSSGLHTKRPCLS 60

Query: 61  DRTTSFNVDAIDLSALSLIDDDKPSI-AAGCYTRRSFRLIARK-RRRRGSRSVSGRSSDR 120
           DRTTSFNVDAID+S LSLIDDDKPSI A G Y+R SF+LIARK RRRRGSRSVSGRS+DR
Sbjct: 61  DRTTSFNVDAIDMSGLSLIDDDKPSITAGGSYSRPSFQLIARKRRRRRGSRSVSGRSTDR 120

Query: 121 SGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNS-RREREEKD 180
           SGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNS RREREEKD
Sbjct: 121 SGTRRCCSVGASAAHGTCSDFPMAVGTDSSGELFVNGDANWSSDVSEAKNSRRREREEKD 180

Query: 181 HLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240
            LGSGFG SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR
Sbjct: 181 QLGSGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           +EIVGENTFADQKSHHRCRRKKHEC MVD+LR
Sbjct: 241 VEIVGENTFADQKSHHRCRRKKHECGMVDSLR 272

[Close]

BLAST of Lsi03G010720 vs. NCBI nr
Match: XP_038906083.1 (uncharacterized protein LOC120091971 [Benincasa hispida])

HSP 1 Score: 524.6 bits (1350), Expect = 5.1e-145
Identity = 264/269 (98.14%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNAKPYYSSTPLHTKRPCLS 60
           MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTN+KPYYSSTPLHTKRPCLS
Sbjct: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNSKPYYSSTPLHTKRPCLS 60

Query: 61  DRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSG 120
           DRTTSFNVDAID+SALSLIDDDKPSIAAGCYTRRS RLIARKRRRRGSRSVSGRSSDRSG
Sbjct: 61  DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSLRLIARKRRRRGSRSVSGRSSDRSG 120

Query: 121 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG 180
           TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG
Sbjct: 121 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG 180

Query: 181 SGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEI 240
           SGFG SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDS+MEI
Sbjct: 181 SGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSKMEI 240

Query: 241 VGENTFADQKSHHRCRRKKHECRMVDALR 270
           VGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 VGENTFADQKSHHRCRRKKHECRMVDALR 269

[Close]

BLAST of Lsi03G010720 vs. NCBI nr
Match: XP_004152251.1 (uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical protein Csa_015327 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 9.1e-134
Identity = 251/270 (92.96%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTH-SSAPTNAKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H +SAPTN+KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAID+SALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240
           GSGF  SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Lsi03G010720 vs. NCBI nr
Match: XP_008454343.1 (PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 9.1e-134
Identity = 251/270 (92.96%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTH-SSAPTNAKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H +SAPTN+KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAID+SALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240
           GSGF  SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Lsi03G010720 vs. NCBI nr
Match: XP_022155253.1 (uncharacterized protein LOC111022393 [Momordica charantia])

HSP 1 Score: 478.4 bits (1230), Expect = 4.2e-131
Identity = 247/272 (90.81%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFHL---PKTLDSDTHSSAPTNAKPYYSSTPLHTKRP 60
           MSRRALDSRQSI+SCTLKLH W PF L   PKTLDSD H+SAPTN+KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 61  CLSDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 120
           CLSDR TSF+VDAID+S LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 121 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 181 HLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240
             G     SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

[Close]

BLAST of Lsi03G010720 vs. NCBI nr
Match: XP_022949469.1 (uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata])

HSP 1 Score: 478.0 bits (1229), Expect = 5.5e-131
Identity = 250/274 (91.24%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MSRRALDSRQSIDSCTLKLHGWSPFH----LPKTLDSDTHSSAPTNAKPYYSSTPLHTKR 60
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT +KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDLSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAID+S LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 D-HLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240
           D HLG GFG SNGG DAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 241 SRMEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           SRMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

[Close]

BLAST of Lsi03G010720 vs. TAIR 10
Match: AT4G02425.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-70
Identity = 163/278 (58.63%), Postives = 197/278 (70.86%), Query Frame = 0


Query: 1   MSRRALD-SRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNAKPYYSSTPLHTKRPCL 60
           MS + L+ SR SI+SCT +L  W PFH  KTLDS   S  P     ++S TP   KRPC 
Sbjct: 1   MSPKHLESSRSSIESCTSQLLSWRPFHRSKTLDS---SDQPPQTNGFHSFTP---KRPCF 60

Query: 61  SDRTTSFNVDAIDLSALSLIDDDK--PSIAAGCYTRR-SFRLIARKRRRRGSRSVSGRSS 120
           SDR+TSF ++A  +S LSL DDD    +++A  Y+ R SFRL+ARKRRRR SRSVSGRSS
Sbjct: 61  SDRSTSFTIEA--MSRLSLADDDNGGKTLSASNYSNRGSFRLVARKRRRRNSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSE-AKNSRREREE 180
           DRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+NSRRER +
Sbjct: 121 DRSGTRRCCSIG---AHGTCSDLPFAVGTDSSGELF--GEANWASDVSEAARNSRRERRD 180

Query: 181 ---KDHLGSGFGPSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGER 240
              +     GFG +N G D  GNESGYGSEPGYRGD EFGYGDE D+E+ED + L WG+ 
Sbjct: 181 SGGEKEASGGFGFAN-GVDPMGNESGYGSEPGYRGDAEFGYGDEFDDEEEDVKPLFWGDT 240

Query: 241 LGDSRMEIVGENTFADQKSHHRCRRKK-HECRMVDALR 270
             DS M + GE  F+D K   RCRR++ H+ + VD++R
Sbjct: 241 --DSTMGMSGETKFSDSKPQFRCRRRRQHDYKTVDSMR 262

The following BLAST results are available for this feature:

BLAST of Lsi03G010720 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G010720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT54	4.4e-134	92.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1	[more]
A0A1S3BYD4	4.4e-134	92.96	uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=...	[more]
A0A6J1DMG8	2.0e-131	90.81	uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1GCW8	2.7e-131	91.24	uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J7N4	2.5e-129	90.07	uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487...	[more]

BLAST of Lsi03G010720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906083.1	5.1e-145	98.14	uncharacterized protein LOC120091971 [Benincasa hispida]	[more]
XP_004152251.1	9.1e-134	92.96	uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical ...	[more]
XP_008454343.1	9.1e-134	92.96	PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo]	[more]
XP_022155253.1	4.2e-131	90.81	uncharacterized protein LOC111022393 [Momordica charantia]	[more]
XP_022949469.1	5.5e-131	91.24	uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata]	[more]

BLAST of Lsi03G010720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02425.1	1.5e-70	58.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..180
None	No IPR available	PANTHER	PTHR36775	LYR MOTIF PROTEIN	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010720.1	Lsi03G010720.1	mRNA