Lsi03G010470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Integrase
Location	chr03: 20119188 .. 20128589 (+)
RNA-Seq Expression	Lsi03G010470
Synteny	Lsi03G010470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTTCATTCAGAGGTGGTTCACGTGGAAGACGTGGTGGTCGTGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAATGGTGGAAATTCAGAAAATTCACAAGAAAGCTCTTCTTCATCTCGAGGTAGAGGAAGCAGAAGAGGAAGAGGTTTTGGCAGAAACCAAGAAGGAGGTCGAGGTAATTTGTCTCACATTCAATGTTTTAACTGCAAAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACCGAAAAATGGAGATGAAAATTCCACCATGATGCATAAAGAGGAGAAAAATGATGAAGGCGTTCTATTTCTTGCATGTAGCGTTCAAGACGACGTTGTAGAGTCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAAGAAATAGAAGTATATTTGTTACTTTGGATGAATCTCTCCAAAGTGAAGTAAAAACTGGTGATGACACTAGATTGCAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACGAAAAAAGGTATAAAACGAGTTACAGATGTGTTTTATGTTCTAGGTCTGAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTCAAAAAGTTTCATTTGAAGGTGATGTATGTACAATCAAAGATCAGACTGGCGTTCTTATTGCCAAGGTAAAAATGATTGCTAATAAGATGTTTCCTTTTAAATTTACATATGGTCAAATATCTTGCTTTAGCAGCATATTAAAGGATCCATCCTGGCTTTGGCATTTTCGATATGGTCACACACTACAACAAAAATGGACTATAATATCAGTCGAAAACAGACATTATTGGAGTACAGTATCGGTCAGGTGACCGACATCGAAGAACGTGTTATTAAAGATGTTTAATGTCGATTGACTTTAATGTCAGTTTTCGACCGACATTATTGATGTCTTTAATGTCAGTTTTCGACCGACATTATAGATGACCGACATTGAACACTAACACCCTCAATGCTGGTAGCCCGACCGACATTAAATGTATTTGCCCGTCATTAAATATTAATTTTCTGTGAAAGGCAATGTCTGTCATCATTGCTTTATTAAAACATTAAAAAAAAATTATTATTTGCATACATGACTGACTAACAAAATTAATATTTCTATACATATAATAAAAGTAATATGATATTTGTATACACCATAACTCAACTTTCATCAAGCACAACAATTAACTAATTCACTCCAATAGAAGTAATATGATTATCCGTCTCTCTACAAACTACATTCAATTTATAAAGATAAACAAAACTTTAAATACAAGACGAGTTATGATCCTTAATTATAAAATACAGAGCATAATGTAATAACTAAGTAACCTATCAACAAGTTACAACAATCAATATTACATAGAGTTCTAAAGTCTAAAGATCAAGAAAGCTGGTTGTCTGGAAGGTCCTATCACAAAACAATCTGCAAAAAAGATATGCTTACTTAAGTATATAAAATTGAGAATATTAAGAATATATCAAATAAAGCTCCAAATTAAAACTTACCTATCTACAAATAGAGCTCCAAAGGTTATAAACTAAATTACAACACTTAAAATAAAACTGAAAAGTCTAAACAAAACATTACCACCTAAATATCTTACCAAAAAGACTAGGGTCTTTACTGGAACGAGTTTGAAGAGTCCAAAACTAGTCTGAATCCACAAACAAGAGTTTACAAGTGTTAGGGACATTTCAAAAACACTCTAATTTAGTCCGAAAGAAATTTAGAGTAACATTAGCATCTAAATATATATTAGATAGAAAGAAAATACATATTAGATGGAAAGAAAATAAAAGGCTGAATATGCAATTTTTTTGCTTCTTCCCAAAAACATTTGACAGCTTCTTATCACCTTTCTTTTCAGATAAAGCACAAGAGGTAGATTTCTGCATTTCTATGTTTGCCTATCTAATACTTGAAGATGTTTCTCAAAACTATAGAGTCGAAGGGTAAATATCAAGATTATGTTGTTAACCTATTCTACAATAAATTTCTGGTAAGTGTGAAAATAGTACTTTTTGTAGTTTCTATAATGTTTGTTGTTGAAAATCCACAAGGAAAGTAAAGAAATTGCTTCATTAAAAAGGTCATACTCTAGTGAGAAGCATCCTGCACAGGACTACAACTAAGACGCGTCTCCTGACTCCTTCCCCGTTCGAGCGCAATCTAACTGTGTGGCTGGTTGGGCATCCTGCATATTTGAAGTGCTTATAAATATAATTACACAACCACAACCTCCATTCCACTAGTCTACCCACGTAAAAAGATTTGCTCAAAGTCATATAATTTTAGAAGAAGGTAAAGTATCAACAAAGCTCAAGTAATATGAACTAAGCAAACATTCTGATTGAATGGTCATATAAAAGGATTTGCTCAAGCTCATATAATTTCAGAAAAAGGTAAAGTATCCACAAAAAATTTTCATATAACTTGACTACCCAATTTTTATCAAGGAGATTTGGGGACTTTAGATCTCTATGAACAATGGTTCGATGACTTGTGTGCAAGTAGTTCATTCATTTGGCCTAAAAAAGAAAGATTTATTAAAAGGAACTAACCATGTTTTGTGGGAAAAATATTTATTTTCTAACTCCTTACCACATCAAGAGTCATTTTCAATTGTCTCCTTTCATCTACTTGAGAGTTGGCCAATGGAGTAACCTATCCAAAAAAAATGACAAAATGACAAATTCATCAATAAATGAAAAAATGTCTATTCTTCACTGCTTTACCATAACTTACATGTTTACATCCAAACAACCGAACAAACAAAAAAAAAGGCTTGAAATTACCTATATTTGAAAAAAAAAATCACAAAAGTACATAAATGCTTAAAAGCATTTCAAAGACTCACTTGAAAATTAGTCTTTAGATCAAACGTGTTAGCAACAAGATAATTTCTATTCCAATCATCTAGCTTATTCCAATCATTTTAACTCTTTCTTAACCCATACTTTAGGACACTTGAAGTCCAATCCAAGTAAGGAACTACCCTAAGACATTGAATACAATATAATTTGAGAATTTCAAGCCCAAAAGTGGGGTTAACTTAGCTACAAACTAAAAGAAATAGCAACTATATATAAAAATAATAATAGTAAATTGACAGTTGAGCAGTTTTTTTACAGCAAGTTCATTGCTAAGCTATTTTTCATGTCTTTTGCTGCTGTTTTAAGTTATTTTCAGCCCAAAACAGTAGATATAAAAACAAAAAACAACAGTATAAAATTGACAGCACTGCAGATTTTTTACAGCAACTTCATTGCGCTGCTGTTTCTTCATATTTTTGTTGCTATTTTAAGTTATTTCCTTCTTTTCACAGTCACCCCTCAATTTACAGTTGTAGATTAAGAAAGAGAGTTTACCAAAAATGAAGTCCACTGCTTGTTCTTTCTCAAATTTTTCCTTCAAGGCTGTTGTATCTCACCCAACAGTGAAATCTGCGACAACAGTACTTCCAAAAAAGAACTCGATTGTCTCATATACCAAAAAAAATTTCCGTATAGAGAACAGATATAAGTTAAATTGGGAAGTGATTGAACCTTAGATAGACCATTATAGTTGAAAAAGGAAGTGTCGAAATGGTTCAAGCCACCTAGTCCTTGGAAAATTTAAAATGAAACTACAAACAAAAGAGTAAGATATTCCACCACTAGTGAAAGTGAAAAATACTTTTATCATCCTCAAACAACCCAAAGCATTGAAAAATACTTTTGCAATCTTAACATTGGAGTGCTTCCTGATATATAAGAGTACCTGTTCGATTGAGCTAAGGGCTTCAACATCTCTCCACTTCTGCAAAGAATAACATTACAAGAGGTCAAACAAAAAAAAAACTTACTTCAATCTTCTTATAACATTCATATTCATTAAACTCCTTCCAATCACTAATAAACATCACATACAGTTGAAAACATCTCATAAAAAAATCGAAAAACAAAACTCAGTGAAAGAACAACAACTAGCCTATGCCAAAGCAAAAATAATCACTAGACATTAAACATTTCCGACAATCGAATTCACTTGTTTAAACAAAACATGATAAAATCTTCGCCGCAACAAATAAAATGCAAAATAAAAAAGATGATAAATTTCGATTAGTTCAACTCTGATAAGCTCCTAACAGATTCTTGGTCCACATGATGCAATGTTGGAAAGGAACTTATAAGTTTCTAAGAACAATCTTGCTTCGTGAGTAACACCTATTACCAATAACATCACTTCAATGCCACTGACAAAAGAATATAAAACTCCAAAATTTAACCAGATTGCTATAGATATCCATAAACATATCATAAGTCACTATGGGAGTATATTTTGTTTGCTTAAAGAAGACATATAGCTGAAACAAAAAGTTTGAAAATTAGCCACATGGATTACTCTGGAGTCAAATTAATTTAATAAACTATTCTTTGTGAATTATTCCACCACTAGTGAAAGTGAAATCAAATTAATTTCTGAACAAAAAATAGCATTTGAAAGTAGAGGAAGACCATACATCGAAAGTTATTGGGTGAGGTTCAATAGTGCAAGTTATTGGGTGAATCTTCACAAAGAGGTAGAACTTTAAGCCTTCGTTACCTGTGGAACAACAAAAATTCAAGAACAATCTACAGTATCAGAATCCACAAAAAATTTGAACCTCAATTTTTTAGGCTTGGACAGAACCACTAGTTTTCTTCAGAAATCAGAAACAAACGTTAGAAAAGGATCTTTATCAATAGGCTTGGACGACGACGATGCTGGTGAACGGATGAAGCTCGGGGACTCACGATGACGGCGTTCATGGATGGACGAAGCATAGATCTTGACGGTGGCGCTTGTGGACAGATCAAGCACAGATCTGCAATGACCTAGGTGAGATTGATGGAGATGCACAAACTTCGGCGTGTCGACGGCGGTGGGATCTGGCGGATTTGCAGAAACCTAAGATCGGCATTGTAGATCTAGCGGCTAGAGGACGAAGTTGACGGGTGAACTTAGAGATCGGCGTAGCTACAGAGACCTGATGGAGCTGCACGGACTGGGTGACCGACGGCGCAGATCTGGTCGTGATCGACGGAGCGAGCGTCGAGTGAGATTGGCCGACGAGATTGACGAAGTTGGGTCTGATTTGCGTATGAAAACAGAGAGAGAGCGAGTGGGTCTAATGGTTTGCATATGAAAATAGAGAGAGAAGAGAGAGAAAGTTGGGTTCTGGTGGAAAACAAAGAGAGTGAAGGAGATAATAAGTTTTGGAAAAAAAATCTTAATAGATAGGGATGGAAAAAAATCTTAATAATAAGTTTTGGAAAAAAAATAATTATCCCAATTCTTTTAACAAATTAATTTCAGAATCCCCAAATCTCTCATTAATTAAACTAATCAATTAACTTTTCAAATTATCTTAATTTTGATTTCATTAATCTAAGATAATGAAACCAAAATTAAAGGAATACTAAAATCCATTAATCTAAGATAATGAATTTAAAATTAACTAAAAATTCAGGATGTCACAAAAATAAAGGGCTAAAAGATTTATGATAGAAATGTAATATTAGTTTCCAAAATCTTGAAATTAAAATCGAGCTTCAGATCCCCAATGAAAGGGGAAAATAGAGAAAAAAAAATATTTTTGCTAAAAATATATTATATAACAAGAGGAAGGAAAAGTAGGAGAGAAATGGAGAAAAAATAGGGTTTGATTATTTTTTATTTTTTAATTGATAATTGGGGAGAGAAATGGGGGAAAAAATAAGGTTTGATTATTTTTTATTTTTTAATTGATAATTGGGGAAGGAGGGAAACAAAATTTGAGAGGGGAATGAAAATGGAGTAGGAGGGAAACAAAAAATGAAGATTAAAAAAGAAAATTAAATTTGAGAATTTTTTTTAGAGGATCTTTAATGTCAGTCGAAAACCGACATTAAAGATCTGTTTTAATGTATCTTTAATGTCAGTCTAAAACCGACATTAAAGATCCGCTTTTTTTTTCACTTGGCCTGACATTAAAGATCCATGTCCAATTTTTTGGACCGACACTGAAGACCTAATTTGTTGTAGTGTCACTTGAATTTCGGATCGCTATCTCATTTGTGCAAAAATCATATGGTGAGGGGCATACAAAATATCAACCATGAGACAGATATTTGTGAAGTGTGTATACTTGCAAAACATCATCGAGATTTATTTCCAACTGGGAAAGCTTGGAGAGCCTCCAGACCTCTTGAGTTGATTCATACAGATTTGTGTGGTCCCATGCGTACAATATCAAATGGACGTAATCGATATTTCATAACCTTCATTGATGATTTCAGCAGAAAGTTGTGGATTTATCTTTTGAAAGAAAAATCTGAAGCATTTGAATGTTTTAAATCTTTCAAAGTTTTAGTTGGGAATCAAAGTGGTCATAAGATAAAAACTTTGAGATCTGATCGTGGTGGAGAATATATAGTTTTTGATAAAAATTTTAAGGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTCCACAACAAAATGGAGTTGCAGAGAGAAAGAATAGAACGATCATGGAGATAGCGAGAAGTATGCTAAAAGCAAAAAAAGATGTCAGATGAGTTTTGGGGAGATTCTGTTGCATGTACTGCTTATATTTTGAATCAAGCTCCAACAAAGAGTGTTCCAGGTATGACTCCTTATGAAGCATGGTGTGGTGAGAAGCCATGTGTTAGTCACTTGAGAGCTTTTGGGAGTATAGCTTATTCTCACATACCAAATCAGCTAAGAGGCAAGCTTGATGATAAATCTGAAAAATGTATTATGGTAGGCTATAGTGAAAATTCTAAAGCTTATCGGTTGTATAATCCTGTGTCAAAAAAGATTATTATCAATAGGGATGTGATTTTCAATGAAGATGAATCCTAGAGCTGGGATGCTGCTGGTGAAGCTGAAAGTCCATTTCATGTTAGCATGGATGAGAATGAAGATGCTCAAGCCTCAGAGCAAGTAGAAATTCAAGCAATGGCATCATCTTCGTCTGCAGTGCCATCTTCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAATATTCAAGATATTTATAATTCTACTAGCAGAATTGATGATGATCATGTTGCTAATTTTGTATTATTTGCTGGTGTTGATCCTATAACTTTTGATGAGGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAAGAAATTGATGCGATAAAAAGAAATGAAACATGGGAGTTGATGGAGCTTCCTGTAAACAAAAAGGCTCTTTGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAAATGGTGAAGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGTTACAAGCAAGAATATGGTGTAGATTATGAAGAAATATTTGCTCCTGTGACGAGAATGGAAACCATCCGATTGATTTTATGTTTAGCTGCTCAAAATAGATGGAATGTTTATCAAATGGATGTAAAATCTGCTTTTTTGAATGGATACTTGAAGGAAGAGATATTTGTTGAACAACCTTTGAGTTATATGAAACAAGGAGAAAAAGAAAAGGTGTACAAGTTGAAGAAGGCCTTGTATGGATTGAAGCAAGCTCCACGAGATTGGTACAGCCGCATTGACAATTTCTTTCTGAAGACGGGATTTCAAAGATGTCCATATGAGCATGCACTCTATGTCAAAGAAGATAAGTATGACAAATTTCTTATCGTTTCACTTTACATTGATGATTTACTTTTCACTGGAAATGATAAATTGTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTTGAAATGAGTGATATGGGTCTCATCCACTATTTTCTCGGAATTGAAGTTGATCAAAAAGATGGAGAGATTGTCATCTCACAACAAAAGTATGCTAATGATTTGTTGAAAAAATTCCGGATGGAAAATGCTTTTCCTTGCAACACTCTCATGGATGCAAATTTGAAATTGAGCAAGGATGATATTGGAGAAGAAGTTTATCCAAGTTTGTATCGAAGTTTAGTTGGAAGCTTGATGTACTTGACGGCAACAAGACCTGATATTTCATTTGTTGTAAGTATGTTAAGTAGATTCATGACAAGCCCGAAAAGAAGTCACTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCGTGGAACCATTAATTTTGGAATTTATTACGAGAAAGTTCCAGAATCAGTATTATTTGGCTTTTGTGATAGTGATTGGGGTGGTAATGTAGATGATAACAAAAGTACATCGGGTTATGTTTTTAGCATCGGTTCAGGTGTTTTTTCATGGTGTTCAAAGAAGCAGCCTGTTGTTGCTCTTTCTACCACCGAAGCAGAATATATCTCTTTATCTACAGCTGGATGTCAAGCTTTATGGCTTAGATGGATGTTGAAGGAATTGAAGTGTACTCAAAGAAGTGAGACTGTTTTATTTTGTGATAATGGATCTGCTATAGCATTATCAAAGAATCCAGTTTTTCATGGAAGAAGCAAGCATATTAGAATCAAGTATCATTTTATCAGAGACTTGGTTAATGATGGAGAAGTGATGGTGAAATATTGCAAGACTCAAGATCAAGTGGCAGATATTTTTACATGTTTGTAAAGTTCAGAGAAAAACTTGGAGTTGCTCAAGTCTAGATTAAAGGAGGATGTTGAAATTAAATTAATCTAGACATCTTAATACATGAATTACATTATTACATACATGAATAGTTGAGATTCAAGGAATAGTTAGATACATGAATTACCAAATACATTGATGAATGTTCATGTATTGGTGAAAAGTCACATGTATTGATATTTATTGTTGATGTCTTTTGATTTACTCTCCTACTAGTATAAATATGTGTAGGATTTTTCATTTGTAAGAAGTAAGAAAGAAAAGAAAGTTTATAAGAAATATTCAAGTTCAATTCTCCTAAATTGTGTGAGTAAGAGAACAATCTTCTTCTCTTGTCTCTTGATTTATATTGTGTGAGTTTACTACGTTTCCAACACAATAAGTTGAACACGAGTTGGATTCTCTACTTTTTTTAGAAACCATAGCTTTAAGAGTCGCTATCTTCGAACCTTCAAACACCAATCTCTTATTACAAACTTTTTCATTCGTTTCTGAATCCTCCTGGCCGCCTCCAGATTGGCCATCGCTTGTGTCCGATTCCAGTCGAAAAAAGCTGGCAGCATTGAATTGAGGATTCACCGTCAGCGAATCGCCGCCATTGAAGCTACGAGCAATGGAAACCCAATCTCTCATGAAGTTGGTTATGGAGGTTGTATCCGCAAGTTTGTGATGGGCAGAGGCACAAATCACTTCTCCTCCACATTCAAATTTTGTCAACTGAATAAACAACAAAGGATGCAATAA

mRNA sequence

ATGCAAACTTCATTCAGAGGTGGTTCACGTGGAAGACGTGGTGGTCGTGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAATGGTGGAAATTCAGAAAATTCACAAGAAAGCTCTTCTTCATCTCGAGGTAGAGGAAGCAGAAGAGGAAGAGGTTTTGGCAGAAACCAAGAAGGAGGTCGAGGTAATTTGTCTCACATTCAATGTTTTAACTGCAAAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACCGAAAAATGGAGATGAAAATTCCACCATGATGCATAAAGAGGAGAAAAATGATGAAGGCGTTCTATTTCTTGCATGTAGCGTTCAAGACGACGTTGTAGAGTCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAAGAAATAGAAGTATATTTGTTACTTTGGATGAATCTCTCCAAAGTGAAGTAAAAACTGGTGATGACACTAGATTGCAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACGAAAAAAGGTATAAAACGAGTTACAGATGTGTTTTATGTTCTAGGTCTGAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTCAAAAAGTTTCATTTGAAGGTGATGTATGTACAATCAAAGATCAGACTGGCGTTCTTATTGCCAAGTCGAAAAAAGCTGGCAGCATTGAATTGAGGATTCACCGTCAGCGAATCGCCGCCATTGAAGCTACGAGCAATGGAAACCCAATCTCTCATGAAGTTGGTTATGGAGGTTGTATCCGCAAGTTTGTGATGGGCAGAGGCACAAATCACTTCTCCTCCACATTCAAATTTTGTCAACTGAATAAACAACAAAGGATGCAATAA

Coding sequence (CDS)

ATGCAAACTTCATTCAGAGGTGGTTCACGTGGAAGACGTGGTGGTCGTGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAATGGTGGAAATTCAGAAAATTCACAAGAAAGCTCTTCTTCATCTCGAGGTAGAGGAAGCAGAAGAGGAAGAGGTTTTGGCAGAAACCAAGAAGGAGGTCGAGGTAATTTGTCTCACATTCAATGTTTTAACTGCAAAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACCGAAAAATGGAGATGAAAATTCCACCATGATGCATAAAGAGGAGAAAAATGATGAAGGCGTTCTATTTCTTGCATGTAGCGTTCAAGACGACGTTGTAGAGTCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAAGAAATAGAAGTATATTTGTTACTTTGGATGAATCTCTCCAAAGTGAAGTAAAAACTGGTGATGACACTAGATTGCAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACGAAAAAAGGTATAAAACGAGTTACAGATGTGTTTTATGTTCTAGGTCTGAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTCAAAAAGTTTCATTTGAAGGTGATGTATGTACAATCAAAGATCAGACTGGCGTTCTTATTGCCAAGTCGAAAAAAGCTGGCAGCATTGAATTGAGGATTCACCGTCAGCGAATCGCCGCCATTGAAGCTACGAGCAATGGAAACCCAATCTCTCATGAAGTTGGTTATGGAGGTTGTATCCGCAAGTTTGTGATGGGCAGAGGCACAAATCACTTCTCCTCCACATTCAAATTTTGTCAACTGAATAAACAACAAAGGATGCAATAA

Protein sequence

MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEGGRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTMMHKEEKNDEGVLFLACSVQDDVVESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVTDVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSKKAGSIELRIHRQRIAAIEATSNGNPISHEVGYGGCIRKFVMGRGTNHFSSTFKFCQLNKQQRMQ

Homology

[Close]

BLAST of Lsi03G010470 vs. ExPASy TrEMBL
Match: A0A5A7U800 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00070 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.6e-99
Identity = 201/249 (80.72%), Postives = 210/249 (84.34%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGS GRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGSRRGRGFGRNQ G
Sbjct: 50  MQTSFRGGSHGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSRRGRGFGRNQGG 109

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEE-KNDEGVLFLACSVQDDVV 120
           GRGN S IQCFNC KYGHFQADCWA KNG  N+TM MHKE+ KNDEG+LFLACSVQ +VV
Sbjct: 110 GRGNFSQIQCFNCGKYGHFQADCWALKNGVGNTTMNMHKEQKKNDEGILFLACSVQHNVV 169

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 170 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 229

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSKKAGSIELRIHRQRI 240
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK       E  IH Q  
Sbjct: 230 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAK-------EQGIHHQMT 289

Query: 241 AAIEATSNG 248
           A +    NG
Sbjct: 290 ARMTPQQNG 291

[Close]

BLAST of Lsi03G010470 vs. ExPASy TrEMBL
Match: A0A5A7SUA3 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00700 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 3.1e-98
Identity = 194/227 (85.46%), Postives = 204/227 (89.87%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGS RGRGFG+NQ G
Sbjct: 216 MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGKNQGG 275

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM--MHKEE-KNDEGVLFLACSVQDDV 120
           GRGN S IQCFNC+KYGHFQADCWA KNG  N+TM  MHKE+ KNDEG+LFL CSVQD+V
Sbjct: 276 GRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTMNNMHKEQKKNDEGILFLTCSVQDNV 335

Query: 121 VESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRV 180
           VE TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRV
Sbjct: 336 VEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRV 395

Query: 181 TDVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSK 225
           T+VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK K
Sbjct: 396 TNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQVGVLIAKVK 442

[Close]

BLAST of Lsi03G010470 vs. ExPASy TrEMBL
Match: A0A5D3C044 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00450 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.2e-97
Identity = 197/249 (79.12%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRR G GR+GGGRNYDNR+G NSENSQESSS S+GRGS RGRGFGRNQ G
Sbjct: 148 MQTSFRGGSRGRRDGHGRQGGGRNYDNRSGANSENSQESSSLSQGRGSERGRGFGRNQGG 207

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEE-KNDEGVLFLACSVQDDVV 120
           GRGN S IQCFNC+KYGHFQADCWA KNG  N+TM MHKE+ KNDEG+LFL CSVQD+VV
Sbjct: 208 GRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTMNMHKEQKKNDEGILFLECSVQDNVV 267

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 268 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 327

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSKKAGSIELRIHRQRI 240
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLI K       E  IH Q  
Sbjct: 328 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLITK-------EQGIHHQMT 387

Query: 241 AAIEATSNG 248
           A +    NG
Sbjct: 388 ARMTPQQNG 389

[Close]

BLAST of Lsi03G010470 vs. ExPASy TrEMBL
Match: A0A5A7SKA6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002680 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.0e-97
Identity = 199/266 (74.81%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGGRGRRGGGRNYDNR   N ENSQE+SS SRGRGS RGRGFGRNQ G
Sbjct: 50  MQTSFRGGSRGRRGGRGRRGGGRNYDNR---NYENSQENSSLSRGRGSGRGRGFGRNQGG 109

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEE-KNDEGVLFLACSVQDDVV 120
           GRGN SHIQCFNC+KYGHF ADCW  KNGD N+TM MHKE+ KNDEG+LFLACSVQDDVV
Sbjct: 110 GRGNFSHIQCFNCRKYGHFPADCWTLKNGDGNTTMNMHKEQKKNDEGILFLACSVQDDVV 169

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+T+LQVKGQGDILVKTKKG KR+T
Sbjct: 170 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTKLQVKGQGDILVKTKKGTKRIT 229

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIA--------KSKKA---- 240
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C I+DQ GVLIA        KS+K     
Sbjct: 230 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIQDQAGVLIAKLRGKLDDKSEKCIMVD 289

Query: 241 -GSIELRIHRQRIAAIEATSNGNPIS 252
              +   + +  I A+E++S+  P S
Sbjct: 290 ENKVAQELEQAEIQAMESSSSLTPSS 312

[Close]

BLAST of Lsi03G010470 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.0e-97
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGS RGRGFGRNQ G
Sbjct: 216 MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 275

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEEKN-DEGVLFLACSVQDDVV 120
           GRGN S IQCFNC KYGHFQA+CWA KNG  N+TM MHKE+K  DEG+LFLACSVQD+VV
Sbjct: 276 GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVV 335

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 336 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 395

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSK 225
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK K
Sbjct: 396 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVK 441

[Close]

BLAST of Lsi03G010470 vs. NCBI nr
Match: KAA0051300.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 7.5e-99
Identity = 201/249 (80.72%), Postives = 210/249 (84.34%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGS GRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGSRRGRGFGRNQ G
Sbjct: 50  MQTSFRGGSHGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSRRGRGFGRNQGG 109

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEE-KNDEGVLFLACSVQDDVV 120
           GRGN S IQCFNC KYGHFQADCWA KNG  N+TM MHKE+ KNDEG+LFLACSVQ +VV
Sbjct: 110 GRGNFSQIQCFNCGKYGHFQADCWALKNGVGNTTMNMHKEQKKNDEGILFLACSVQHNVV 169

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 170 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 229

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSKKAGSIELRIHRQRI 240
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK       E  IH Q  
Sbjct: 230 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAK-------EQGIHHQMT 289

Query: 241 AAIEATSNG 248
           A +    NG
Sbjct: 290 ARMTPQQNG 291

[Close]

BLAST of Lsi03G010470 vs. NCBI nr
Match: KAA0032729.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 6.3e-98
Identity = 194/227 (85.46%), Postives = 204/227 (89.87%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGS RGRGFG+NQ G
Sbjct: 216 MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGKNQGG 275

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM--MHKEE-KNDEGVLFLACSVQDDV 120
           GRGN S IQCFNC+KYGHFQADCWA KNG  N+TM  MHKE+ KNDEG+LFL CSVQD+V
Sbjct: 276 GRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTMNNMHKEQKKNDEGILFLTCSVQDNV 335

Query: 121 VESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRV 180
           VE TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRV
Sbjct: 336 VEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRV 395

Query: 181 TDVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSK 225
           T+VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK K
Sbjct: 396 TNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQVGVLIAKVK 442

[Close]

BLAST of Lsi03G010470 vs. NCBI nr
Match: TYK05177.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 2.4e-97
Identity = 197/249 (79.12%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRR G GR+GGGRNYDNR+G NSENSQESSS S+GRGS RGRGFGRNQ G
Sbjct: 148 MQTSFRGGSRGRRDGHGRQGGGRNYDNRSGANSENSQESSSLSQGRGSERGRGFGRNQGG 207

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEE-KNDEGVLFLACSVQDDVV 120
           GRGN S IQCFNC+KYGHFQADCWA KNG  N+TM MHKE+ KNDEG+LFL CSVQD+VV
Sbjct: 208 GRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTMNMHKEQKKNDEGILFLECSVQDNVV 267

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 268 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 327

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSKKAGSIELRIHRQRI 240
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLI K       E  IH Q  
Sbjct: 328 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLITK-------EQGIHHQMT 387

Query: 241 AAIEATSNG 248
           A +    NG
Sbjct: 388 ARMTPQQNG 389

[Close]

BLAST of Lsi03G010470 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 4.1e-97
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGS RGRGFGRNQ G
Sbjct: 216 MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 275

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEEKN-DEGVLFLACSVQDDVV 120
           GRGN S IQCFNC KYGHFQA+CWA KNG  N+TM MHKE+K  DEG+LFLACSVQD+VV
Sbjct: 276 GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVV 335

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 336 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 395

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSK 225
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK K
Sbjct: 396 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVK 441

[Close]

BLAST of Lsi03G010470 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 4.1e-97
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MQTSFRGGSRGRRGGRGRRGGGRNYDNRNGGNSENSQESSSSSRGRGSRRGRGFGRNQEG 60
           MQTSFRGGSRGRRGG GRRGGGRNYDNR+G NSENSQESSS SRGRGS RGRGFGRNQ G
Sbjct: 216 MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 275

Query: 61  GRGNLSHIQCFNCKKYGHFQADCWAPKNGDENSTM-MHKEEKN-DEGVLFLACSVQDDVV 120
           GRGN S IQCFNC KYGHFQA+CWA KNG  N+TM MHKE+K  DEG+LFLACSVQD+VV
Sbjct: 276 GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVV 335

Query: 121 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVKTGDDTRLQVKGQGDILVKTKKGIKRVT 180
           E TWYLDSGCSNHMT NRSIFVTLDES QSEVKTGD+TRLQVKGQGDILVKTKKG KRVT
Sbjct: 336 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 395

Query: 181 DVFYVLGLKHNLLSIGQLLQRGQKVSFEGDVCTIKDQTGVLIAKSK 225
           +VFYV GLKHNLLSIGQLLQRG KVSFEGD+C IKDQ GVLIAK K
Sbjct: 396 NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVK 441

[Close]

BLAST of Lsi03G010470 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 119 ESTWYLDSGCSNHMTRNRSIFVTLDESLQSEVK--TGD---DTRLQVKGQGDILVKTKKG 178
           E+ W + S  SNHMT +   F TLD S + +VK  +GD    T   V+G GD+   T +G
Sbjct: 266 ENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEG 325

Query: 179 IKRVTDVFYVLGLKHNLLSIGQLLQRGQKVSFEGDV-CTIKDQT 217
            K + +V YV G++ N LS+ QL + G +VS E    C + D+T
Sbjct: 326 NKTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRT 369

The following BLAST results are available for this feature:

BLAST of Lsi03G010470 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G010470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U800	3.6e-99	80.72	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00070 PE=4 ...	[more]
A0A5A7SUA3	3.1e-98	85.46	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00700 PE=4...	[more]
A0A5D3C044	1.2e-97	79.12	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00450 PE=...	[more]
A0A5A7SKA6	2.0e-97	74.81	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002680 PE=4...	[more]
A0A5D3CLV1	2.0e-97	85.84	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]

BLAST of Lsi03G010470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051300.1	7.5e-99	80.72	integrase [Cucumis melo var. makuwa]	[more]
KAA0032729.1	6.3e-98	85.46	integrase [Cucumis melo var. makuwa]	[more]
TYK05177.1	2.4e-97	79.12	integrase [Cucumis melo var. makuwa]	[more]
TYJ95504.1	4.1e-97	85.84	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	4.1e-97	85.84	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Lsi03G010470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20980.1	1.4e-10	39.42	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 69..85 e-value: 0.0033 score: 26.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 69..83 e-value: 3.4E-4 score: 20.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 70..83 score: 9.174718
None	No IPR available	GENE3D	4.10.60.10		coord: 59..94 e-value: 1.2E-6 score: 30.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 68..209
None	No IPR available	PANTHER	PTHR34222:SF31	SUBFAMILY NOT NAMED	coord: 68..209
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 55..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010470.1	Lsi03G010470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding