Lsi03G010390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Gibberellin-regulated protein
Location	chr03: 19955854 .. 19956253 (+)
RNA-Seq Expression	Lsi03G010390
Synteny	Lsi03G010390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTTTTCTTTTTCACATTCTTGCTTTCCTTTCTTCTCTTCACATCTTCCTTCATAGACATCGTCATCGCCCAGCCCGGTAAGTCGTCGTCGTCAATTGTATACCTCTTCCTCTTCTTTCATGTTGACAATAATGCCTTTAGTTTTGGGATCTAACCTTTCAACATTATTTTTTGTTTTATTGTTTGGTTGTTTATGCATGTGTGAAGTGTTTTGTGACAAAAAATGCAAGAAGAGATGCTCAAAGGCAGGAGTGATGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTATTGCAAGTGTGTTCCTTCTGGAACTTATGGGAACAAGCATGAGTGCCCTTGTTATAGGGACATGAGGAGTTCTAAGGGTAGGCCCAAGTGCCCTTGA

mRNA sequence

ATGAAGAAGCTTTTCTTTTTCACATTCTTGCTTTCCTTTCTTCTCTTCACATCTTCCTTCATAGACATCGTCATCGCCCAGCCCGTGTTTTGTGACAAAAAATGCAAGAAGAGATGCTCAAAGGCAGGAGTGATGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTATTGCAAGTGTGTTCCTTCTGGAACTTATGGGAACAAGCATGAGTGCCCTTGTTATAGGGACATGAGGAGTTCTAAGGGTAGGCCCAAGTGCCCTTGA

Coding sequence (CDS)

ATGAAGAAGCTTTTCTTTTTCACATTCTTGCTTTCCTTTCTTCTCTTCACATCTTCCTTCATAGACATCGTCATCGCCCAGCCCGTGTTTTGTGACAAAAAATGCAAGAAGAGATGCTCAAAGGCAGGAGTGATGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTATTGCAAGTGTGTTCCTTCTGGAACTTATGGGAACAAGCATGAGTGCCCTTGTTATAGGGACATGAGGAGTTCTAAGGGTAGGCCCAAGTGCCCTTGA

Protein sequence

MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCVPSGTYGNKHECPCYRDMRSSKGRPKCP

Homology

[Close]

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.4e-29
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 3  KLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCV 62
          KLF  T LL  L+ T S I   +A   FCD KCK RCSKAG+ DRC+KYCGICC  CKCV
Sbjct: 2  KLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCV 61

Query: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 90
          PSGTYGNKHECPCYRD ++SKG+ KCP
Sbjct: 62 PSGTYGNKHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-24
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 30 FCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCVPSGTYGNKHECPCYRDMRSSKGRPKCP 89
          FCD KC  RCSKAG  +RC+KYCGICC  C CVPSGTYGNK ECPCYRD+++SKG PKCP
Sbjct: 4  FCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63

[Close]

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-22
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 30  FCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCVPSGTYGNKHECPCYRDMRSSKGRPKCP 89
           +C +KC+ RC +AG+ DRC+KYCGICC  C+CVPSGTYGNKHEC CYRD  SSKG PKCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-21
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 10 LLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK-CVPSGTYG 69
          L+  LL TSS   +  A    C  KC  RCSKAG  DRC+KYC ICC  C  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 70 NKHECPCYRDMRSSKGRPKCP 90
          NK ECPCYRDM++SKG  KCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-20
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  KLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCV 62
          KL    F +  LL TSSF  ++ +    C  KC  RCSKAG  + C+KYC ICC  C CV
Sbjct: 2  KLVVVQFFIISLLLTSSF-SVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 61

Query: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 90
          PSGT+G+K ECPCYRDM++SKG  KCP
Sbjct: 62 PSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL
Match: A0A5D3E0A6 (Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00810 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.1e-42
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFFFTFLL FLLFTSSFID V A+PVFCDKKCKKRCS+AGV DRC+KYCGICCGYCK
Sbjct: 1  MKKLFFFTFLLCFLLFTSSFIDTVNAKPVFCDKKCKKRCSRAGVKDRCMKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKGRPKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL
Match: A0A0A0KV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001520 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLF FTFLL FLLFTSSFIDIV A+PVFCDKKCKKRCSKAGV DRCIKYCGICCGYCK
Sbjct: 1  MKKLFLFTFLLCFLLFTSSFIDIVNAKPVFCDKKCKKRCSKAGVKDRCIKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPK 88
          CVPSGTYGNKHECPCYRDMRSSKGRPK
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGRPK 87

[Close]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL
Match: A0A6J1D7V8 (peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111017729 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFF T LL FLLFTSSFI+IVIA+ VFCDK+CKKRCSKAGVMDRCIKYCGICCGYCK
Sbjct: 1  MKKLFFSTLLLCFLLFTSSFINIVIAKSVFCDKQCKKRCSKAGVMDRCIKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL
Match: B9HS89 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G092600 PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 6.5e-31
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFF T LL  LLF+SSF++ V+A+  FC KKC+ RC+ AG+ DRC+KYCGICC  CK
Sbjct: 1  MKKLFFATLLLCSLLFSSSFLEPVMAKSSFCAKKCETRCANAGIQDRCLKYCGICCEQCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRD R+SKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDKRNSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL
Match: A0A4U5QA14 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000132620 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFF T LL  LLF+SSF++ V+A+  FC KKC  RC+ AG+ DRC+KYCGICC  CK
Sbjct: 1  MKKLFFATLLLCSLLFSSSFLEPVMAKSSFCAKKCDTRCANAGIQDRCLKYCGICCEQCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRD R+SKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDKRNSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. NCBI nr
Match: XP_038906246.1 (peamaclein-like [Benincasa hispida])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFFFTFLL+FLL TSSFIDIVIA PVFC KKCKKRCSKAGVMDRCIKYCGICCGYCK
Sbjct: 1  MKKLFFFTFLLTFLLLTSSFIDIVIAMPVFCGKKCKKRCSKAGVMDRCIKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. NCBI nr
Match: KAE8649034.1 (hypothetical protein Csa_014887 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 4.4e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLF FTFLL FLLFTSSFIDIV A+PVFCDKKCKKRCSKAGV DRCIKYCGICCGYCK
Sbjct: 1  MKKLFLFTFLLCFLLFTSSFIDIVNAKPVFCDKKCKKRCSKAGVKDRCIKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKGRPKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Lsi03G010390 vs. NCBI nr
Match: KAA0044354.1 (peamaclein-like [Cucumis melo var. makuwa] >TYK29483.1 peamaclein-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-41
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFFFTFLL FLLFTSSFID V A+PVFCDKKCKKRCS+AGV DRC+KYCGICCGYCK
Sbjct: 1  MKKLFFFTFLLCFLLFTSSFIDTVNAKPVFCDKKCKKRCSRAGVKDRCMKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKGRPKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Lsi03G010390 vs. NCBI nr
Match: XP_022149266.1 (peamaclein-like [Momordica charantia])

HSP 1 Score: 175.3 bits (443), Expect = 2.4e-40
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFF T LL FLLFTSSFI+IVIA+ VFCDK+CKKRCSKAGVMDRCIKYCGICCGYCK
Sbjct: 1  MKKLFFSTLLLCFLLFTSSFINIVIAKSVFCDKQCKKRCSKAGVMDRCIKYCGICCGYCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRDMRSSKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDMRSSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. NCBI nr
Match: XP_002313889.2 (peamaclein [Populus trichocarpa] >PNT20456.1 hypothetical protein POPTR_009G092600 [Populus trichocarpa])

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK 60
          MKKLFF T LL  LLF+SSF++ V+A+  FC KKC+ RC+ AG+ DRC+KYCGICC  CK
Sbjct: 1  MKKLFFATLLLCSLLFSSSFLEPVMAKSSFCAKKCETRCANAGIQDRCLKYCGICCEQCK 60

Query: 61 CVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
          CVPSGTYGNKHECPCYRD R+SKG+PKCP
Sbjct: 61 CVPSGTYGNKHECPCYRDKRNSKGKPKCP 89

[Close]

BLAST of Lsi03G010390 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 106.7 bits (265), Expect = 9.9e-24
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 30  FCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCVPSGTYGNKHECPCYRDMRSSKGRPKCP 89
           +C +KC+ RC +AG+ DRC+KYCGICC  C+CVPSGTYGNKHEC CYRD  SSKG PKCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Lsi03G010390 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 10 LLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCK-CVPSGTYG 69
          L+  LL TSS   +  A    C  KC  RCSKAG  DRC+KYC ICC  C  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 70 NKHECPCYRDMRSSKGRPKCP 90
          NK ECPCYRDM++SKG  KCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Lsi03G010390 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.7e-21
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  KLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAGVMDRCIKYCGICCGYCKCV 62
          KL    F +  LL TSSF  ++ +    C  KC  RCSKAG  + C+KYC ICC  C CV
Sbjct: 2  KLVVVQFFIISLLLTSSF-SVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 61

Query: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 90
          PSGT+G+K ECPCYRDM++SKG  KCP
Sbjct: 62 PSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Lsi03G010390 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein )

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-19
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAG-VMDRCIKYCGICCGYC 60
          MK      F +  LL TSSF  +  A    C  KC  RCSKA    + C++ C ICC  C
Sbjct: 1  MKMPVVVQFFIISLLLTSSFYVLSSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKC 60

Query: 61 KCVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
           CVPSGTYGNK ECPCYRDM++SKG  KCP
Sbjct: 61 NCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90

[Close]

BLAST of Lsi03G010390 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein )

HSP 1 Score: 87.4 bits (215), Expect = 6.2e-18
Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MKKLFFFTFLLSFLLFTSSFIDIVIAQPVFCDKKCKKRCSKAG-VMDRCIKYCGICCGYC 60
          MK      F +  LL TSSF  ++ +    C  KC  RCSKA    + C++ C ICC  C
Sbjct: 1  MKMPVVVQFFIISLLLTSSFY-VLSSADSSCGGKCSVRCSKADRTHEECLEDCDICCQKC 60

Query: 61 KCVPSGTYGNKHECPCYRDMRSSKGRPKCP 90
           CVPSGTYGNK ECPCYRDM++SKG  KCP
Sbjct: 61 NCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89

The following BLAST results are available for this feature:

BLAST of Lsi03G010390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q948Z4	3.4e-29	67.82	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
P86888	3.3e-24	75.00	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]
O82328	1.4e-22	71.67	Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV...	[more]
Q8LFM2	2.0e-21	61.73	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
O80641	3.8e-20	55.17	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]

BLAST of Lsi03G010390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0A6	8.1e-42	92.13	Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0081...	[more]
A0A0A0KV42	1.2e-40	94.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001520 PE=3 SV=1	[more]
A0A6J1D7V8	1.2e-40	91.01	peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111017729 PE=3 SV=1	[more]
B9HS89	6.5e-31	71.91	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G092600 PE=3 ...	[more]
A0A4U5QA14	1.1e-30	71.91	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000132620 PE=3 SV=1	[more]

BLAST of Lsi03G010390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906246.1	1.5e-42	94.38	peamaclein-like [Benincasa hispida]	[more]
KAE8649034.1	4.4e-42	94.38	hypothetical protein Csa_014887 [Cucumis sativus]	[more]
KAA0044354.1	1.7e-41	92.13	peamaclein-like [Cucumis melo var. makuwa] >TYK29483.1 peamaclein-like [Cucumis ...	[more]
XP_022149266.1	2.4e-40	91.01	peamaclein-like [Momordica charantia]	[more]
XP_002313889.2	1.3e-30	71.91	peamaclein [Populus trichocarpa] >PNT20456.1 hypothetical protein POPTR_009G0926...	[more]

BLAST of Lsi03G010390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14900.1	9.9e-24	71.67	Gibberellin-regulated family protein	[more]
AT5G59845.1	1.4e-22	61.73	Gibberellin-regulated family protein	[more]
AT2G39540.1	2.7e-21	55.17	Gibberellin-regulated family protein	[more]
AT1G10588.1	4.3e-19	53.33	Gibberellin-regulated family protein	[more]
AT1G10588.2	6.2e-18	52.22	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 30..89 e-value: 1.1E-22 score: 79.9
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 5..89
None	No IPR available	PANTHER	PTHR23201:SF88	SNAKIN-1	coord: 5..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010390.1	Lsi03G010390.1	mRNA