Lsi03G010210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010210
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pectin lyase-like superfamily protein
Location	chr03: 19716658 .. 19718503 (-)
RNA-Seq Expression	Lsi03G010210
Synteny	Lsi03G010210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTGGATTGTATCAGCTTCGTCTGATTTTAATGTTCTTGATTATGGAGCAATTGGAAATGGAAAAACTGATGATTCACAAGTAACTCATCTAACTACTTTGTGAATTATTTTATTTTATTTTTTCAATTTTATTCTTATAACTTATAGTTTTTCTTTTGGGTGATAAGGCTTTCTTGAAAGCATGGAAGGATGTGTGTGGAGCAATGGAAGGGATTCCAACATTGCATGTCCCAATTGGAAAAACTTTCATGTTGAATCCTCTCAAATTTGAGGGTCCATGCAACTCTAAACAAGTTCATTTTGAGGTACTTAATCATACCCCATTTTTCAAACCATTTTCTAAATTGACCTTTTATAATCGTAGCTTAAACCCACGATTTGTTTAAATTATTTTTCTTCAAACTTTGAAACCCTATTTTCTTTTTTTCTTTTTTTTTTTTATTTTGTAGCTTAGAGGAACTATAATAGCTCCAAGCAAGGGTGCATGGCCTAGCGATAGTAAAGAAAACTGGATCCAATTTTTGGATATTAATGGCCTCACTCTTAGTGGAACTGGTCAGTTTGATGGCCGGGGTTCTTTTTGGTGGAAAGATTGTCATTCAAATTGCCAAACACCAACTGTAAGTTTATAATTTTCTTTTATATTCATACAAGTATATGTATTTATAATATTAATATAGGTTTCATGGTTGAATTTATAATGTGGATAATAATTATAGTATATGGTTTTGTAGGCATTATCTTTCCACAATTGCAATGGACTCCAACTAAAGGAAACAAAACACATCAATAGTGGCAAAAGCCATTTCTCCATAGAAGCATGCAATGATGGCATTATTTCAGACATTCAAATTATTGCTCCTAAAGACAGTCCTAACACATATGGAATCGACATTTCTAAATCAAACAATATTCTTATTCAAAACTCTGCAATAGAAACGGGTAACAATTTTTTATTAATCTTTGAAATCATTATTATATATACATTTTTTTTCATATTGACTTTAATTTCAAATTTTAATTTTAATATAGGTGATGATTGTATTACTCTAAACAACGGATCTTCCAATATCAAAATCGTAGGTGTCACTTGCGGCCCTGGCCATGGGATAAGGTAAAAATTACATTTTCTTTATATAACATTATAATACCATGTAAACTCTAATCCTAACTTGTAATCTCCTTTTACATATTAACTTGTTTGTTTGAATGCAGCATTGGAAGCTTAGGAGGAGATGGAGAATATAGCATTGTTGAAAACATCTATGTAAGCAATTGCCTCTTGAAGGGCACTCAAAATGGACTAAGAATCAAGACTTTGCAGGTAATAATCATTTTAAAATTGATTCTTATATACCACGTAGAATATATATATTAGAAAAAAAATAAATATTTTTCCAAACATAATTACAGGGTGGATATGGATATGCAAGGAACATCACATTCGAAAAAATAACATTGATGGATACGCAAAATTCGATCATTATTGATCAAGATCACTCAACATTTGCATATTCAAGAAAAGCCCAGGTATACACAAGTGACATCATCTCATTAATTACCTTATGTTAATAGAGTTTATAATAATATGATGTTGATATTTTATTTTTTAGGCAATGAACATAAAAGTGAAGGACGTGACATATCGTGAAATTCATGGAACATCAACAAGCCATAATGCAATTGTTTTGAAGTGTTGTCAAGCTCGTTGTAGTAATATTGTAATGGAAGATGTAAGCATAATGACATCAACTCCAGGAAAAGAAGTCCAAGCATTTTGCCAAAATGTTAATGGAAGAGAAGAGTCTACTGTCCCAAGTGTGTCTTGCTTATCAAAATCTAAT

mRNA sequence

TCGTGGATTGTATCAGCTTCGTCTGATTTTAATGTTCTTGATTATGGAGCAATTGGAAATGGAAAAACTGATGATTCACAAGCTTTCTTGAAAGCATGGAAGGATGTGTGTGGAGCAATGGAAGGGATTCCAACATTGCATGTCCCAATTGGAAAAACTTTCATGTTGAATCCTCTCAAATTTGAGGGTCCATGCAACTCTAAACAAGTTCATTTTGAGCTTAGAGGAACTATAATAGCTCCAAGCAAGGGTGCATGGCCTAGCGATAGTAAAGAAAACTGGATCCAATTTTTGGATATTAATGGCCTCACTCTTAGTGGAACTGGTCAGTTTGATGGCCGGGGTTCTTTTTGGTGGAAAGATTGTCATTCAAATTGCCAAACACCAACTGCATTATCTTTCCACAATTGCAATGGACTCCAACTAAAGGAAACAAAACACATCAATAGTGGCAAAAGCCATTTCTCCATAGAAGCATGCAATGATGGCATTATTTCAGACATTCAAATTATTGCTCCTAAAGACAGTCCTAACACATATGGAATCGACATTTCTAAATCAAACAATATTCTTATTCAAAACTCTGCAATAGAAACGGGTGATGATTGTATTACTCTAAACAACGGATCTTCCAATATCAAAATCGTAGGTGTCACTTGCGGCCCTGGCCATGGGATAAGCATTGGAAGCTTAGGAGGAGATGGAGAATATAGCATTGTTGAAAACATCTATGTAAGCAATTGCCTCTTGAAGGGCACTCAAAATGGACTAAGAATCAAGACTTTGCAGGGTGGATATGGATATGCAAGGAACATCACATTCGAAAAAATAACATTGATGGATACGCAAAATTCGATCATTATTGATCAAGATCACTCAACATTTGCATATTCAAGAAAAGCCCAGGCAATGAACATAAAAGTGAAGGACGTGACATATCGTGAAATTCATGGAACATCAACAAGCCATAATGCAATTGTTTTGAAGTGTTGTCAAGCTCGTTGTAGTAATATTGTAATGGAAGATGTAAGCATAATGACATCAACTCCAGGAAAAGAAGTCCAAGCATTTTGCCAAAATGTTAATGGAAGAGAAGAGTCTACTGTCCCAAGTGTGTCTTGCTTATCAAAATCTAAT

Coding sequence (CDS)

TCGTGGATTGTATCAGCTTCGTCTGATTTTAATGTTCTTGATTATGGAGCAATTGGAAATGGAAAAACTGATGATTCACAAGCTTTCTTGAAAGCATGGAAGGATGTGTGTGGAGCAATGGAAGGGATTCCAACATTGCATGTCCCAATTGGAAAAACTTTCATGTTGAATCCTCTCAAATTTGAGGGTCCATGCAACTCTAAACAAGTTCATTTTGAGCTTAGAGGAACTATAATAGCTCCAAGCAAGGGTGCATGGCCTAGCGATAGTAAAGAAAACTGGATCCAATTTTTGGATATTAATGGCCTCACTCTTAGTGGAACTGGTCAGTTTGATGGCCGGGGTTCTTTTTGGTGGAAAGATTGTCATTCAAATTGCCAAACACCAACTGCATTATCTTTCCACAATTGCAATGGACTCCAACTAAAGGAAACAAAACACATCAATAGTGGCAAAAGCCATTTCTCCATAGAAGCATGCAATGATGGCATTATTTCAGACATTCAAATTATTGCTCCTAAAGACAGTCCTAACACATATGGAATCGACATTTCTAAATCAAACAATATTCTTATTCAAAACTCTGCAATAGAAACGGGTGATGATTGTATTACTCTAAACAACGGATCTTCCAATATCAAAATCGTAGGTGTCACTTGCGGCCCTGGCCATGGGATAAGCATTGGAAGCTTAGGAGGAGATGGAGAATATAGCATTGTTGAAAACATCTATGTAAGCAATTGCCTCTTGAAGGGCACTCAAAATGGACTAAGAATCAAGACTTTGCAGGGTGGATATGGATATGCAAGGAACATCACATTCGAAAAAATAACATTGATGGATACGCAAAATTCGATCATTATTGATCAAGATCACTCAACATTTGCATATTCAAGAAAAGCCCAGGCAATGAACATAAAAGTGAAGGACGTGACATATCGTGAAATTCATGGAACATCAACAAGCCATAATGCAATTGTTTTGAAGTGTTGTCAAGCTCGTTGTAGTAATATTGTAATGGAAGATGTAAGCATAATGACATCAACTCCAGGAAAAGAAGTCCAAGCATTTTGCCAAAATGTTAATGGAAGAGAAGAGTCTACTGTCCCAAGTGTGTCTTGCTTATCAAAATCTAAT

Protein sequence

SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQNVNGREESTVPSVSCLSKSN

Homology

[Close]

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-92
Identity = 183/383 (47.78%), Postives = 237/383 (61.88%), Query Frame = 0


Query: 3   IVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFE 62
           I ++S+  +V  +GA+G+G TDDSQAFLKAW+ VC    G     VP G TFML PLKF+
Sbjct: 17  IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMTFMLQPLKFQ 76

Query: 63  GPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC 122
           G C S  V  ++ G ++APSKG W  D K+ WI F DI GL + G G+ +G+GS WW+  
Sbjct: 77  GSCKSTPVFVQMLGKLVAPSKGNWKGD-KDQWILFTDIEGLVIEGDGEINGQGSSWWEHK 136

Query: 123 HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGI 182
            S    PTAL F +CN L+L    H++S  +H  I  CN   IS ++I AP+ SPNT GI
Sbjct: 137 GSR---PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGI 196

Query: 183 DISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVEN 242
           D+  S+N++IQ+  I TGDDCI +N+G+SNI I G+ CGPGHGISIGSLG DGE + VEN
Sbjct: 197 DVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVEN 256

Query: 243 IYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDH----STFAYS 302
           + V NC  +GT NG RIKT QGG GYAR ITF  ITL + +N IIIDQ +    S  A  
Sbjct: 257 VCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKD 316

Query: 303 RKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMT--STPGKEVQ 362
           RK+ A  ++V  V +    GTS S   +  +C +   C+ I + D+ I T  S  G+  Q
Sbjct: 317 RKSSA--VEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQ 376

Query: 363 AFCQNVNGREESTVPSVSCLSKS 379
             C NV G     VP + CL  S
Sbjct: 377 GQCLNVRGASTIAVPGLECLELS 392

[Close]

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot
Match: O23147 (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.5e-73
Identity = 156/372 (41.94%), Postives = 223/372 (59.95%), Query Frame = 0


Query: 7   SSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCN 66
           +S  +V ++GA G+GKTDD+QAF KAWK  C +  G+ T  VP GKT++L   +F GPC 
Sbjct: 65  ASTVSVSNFGAKGDGKTDDTQAFKKAWKKAC-STNGVTTFLVPKGKTYLLKSTRFRGPCK 124

Query: 67  SKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSG--TGQFDGRGSFWWK---- 126
           S + +F++ GT+ A +K +   D K +W+   D+N L++ G  TG  +G G  WW+    
Sbjct: 125 SLR-NFQILGTLSASTKRSDYKD-KNHWLILEDVNNLSIDGGSTGIINGNGKTWWQNSCK 184

Query: 127 -DCHSNC-QTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPN 186
            D    C + PTAL+ +N   L +K  +  N+ +   SIE CN   +S+++I AP DSPN
Sbjct: 185 IDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPN 244

Query: 187 TYGIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYS 246
           T GI I+ + NI + NS I TGDDCI++ +G+ N++I  +TCGPGHGISIGSLG D   +
Sbjct: 245 TDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKA 304

Query: 247 IVENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYS 306
            V  I V       + NG+RIKT QGG G A+NI F+ I + + +N IIIDQD+      
Sbjct: 305 YVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCD-KDK 364

Query: 307 RKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQA-RCSNIVMEDVSIMTSTPGKEVQAF 366
            + Q   ++VK+V Y+ I GTS +  AI L C +   C  IV+E+V I   T      A 
Sbjct: 365 CEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIKGGT------AS 424

Query: 367 CQNVNGREESTV 370
           C+N N + + TV
Sbjct: 425 CKNANVKNQGTV 426

[Close]

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 3.7e-72
Identity = 157/370 (42.43%), Postives = 220/370 (59.46%), Query Frame = 0


Query: 11  NVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCNSKQV 70
           +V D+GA G+GKTDD+QAF+ AWK  C +  G   L VP G T++L  ++  GPCNS  +
Sbjct: 69  SVSDFGAKGDGKTDDTQAFVNAWKKACSS-NGAVNLLVPKGNTYLLKSIQLTGPCNS-IL 128

Query: 71  HFELRGTIIAPSKGAWPSDSKE--NWIQFLDINGLTLSG--TGQFDGRGSFWWKD-CHSN 130
             ++ GT+ A  K    SD K+   WI F  +N L++ G  TG  DG G  WW++ C  N
Sbjct: 129 TVQIFGTLSASQK---RSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRN 188

Query: 131 -----CQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 190
                 + PTAL+F+N   L +K  K  N+ +   SIE C++  +S++ + AP DSPNT 
Sbjct: 189 KAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTD 248

Query: 191 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 250
           GI I+ + NI +  S I TGDDCI++ +GS N++I  +TCGPGHGISIGSLG D   + V
Sbjct: 249 GIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFV 308

Query: 251 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 310
             + V    L GT NG+RIKT QGG G A NI F+ I + + +N IIIDQD+   +    
Sbjct: 309 SGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTT 368

Query: 311 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMTSTPGKEVQAFCQ 370
            ++  ++VK+V YR+I GTS S NAI   C +   C  IV++ V+I      K  +A C 
Sbjct: 369 EKSA-VQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI------KGGKATCT 426

[Close]

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 6.2e-72
Identity = 149/368 (40.49%), Postives = 215/368 (58.42%), Query Frame = 0


Query: 5   SASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGP 64
           S+   FNV  +GA  NG  DDS+AF+KAW+  C +  GI  +  P  + +ML  + F GP
Sbjct: 66  SSPRSFNVNTFGAKANG-NDDSKAFMKAWEAACSS-TGIVYIVAPKNRDYMLKAVTFSGP 125

Query: 65  CNSKQVHFELRGTIIAPSKGAW--PSDSKE--NWIQFLDINGLTLSGTGQFDGRGSFWW- 124
           C S  + F++ G I      AW  PSD KE  +WI F ++N L + G G+ DG G  WW 
Sbjct: 126 CKSSLIIFKIYGRI-----EAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWP 185

Query: 125 KDCHSNCQ-----TPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPK 184
           K C  N Q      PTA++F  CN L++   +  N+ + H + + C +    ++ + +P 
Sbjct: 186 KSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPA 245

Query: 185 DSPNTYGIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGD 244
           DSPNT GI +S + NILIQ+S + TGDDCI++ +GS N++  G+TCGPGHGISIGSLG D
Sbjct: 246 DSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGED 305

Query: 245 GEYSIVENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHST 304
              + V N+ V+   L GT NG+RIKT QGG+G A+NI F+ I + +  N III+QD+  
Sbjct: 306 NSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCD 365

Query: 305 FAYSRKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMTSTPGKE 362
              +   Q   ++V +V Y+ I GTS+   A+   C +   C  I M++V ++  T    
Sbjct: 366 RVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDV 425

[Close]

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-67
Identity = 146/368 (39.67%), Postives = 206/368 (55.98%), Query Frame = 0


Query: 5   SASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGP 64
           S  +D +V D+GA G+G TDD++AF KAWKD C +      L VP  K ++L  + F GP
Sbjct: 80  SPDTDISVDDFGARGDG-TDDTKAFEKAWKDACSSGS---VLIVPENKNYLLKQITFSGP 139

Query: 65  CNSKQVHFELRGTIIAPS-KGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDCH 124
           C S  +  ++RGTI A S +  W   +++ WI+F DI+ LTL G G  +G G  WW    
Sbjct: 140 CKS-DLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWW---D 199

Query: 125 SNCQ---------TPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPK 184
           S+C+          PTAL+F +C  L + +    +S K H S + C D I S++ + AP+
Sbjct: 200 SSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPE 259

Query: 185 DSPNTYGIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGD 244
            SPNT GI I+ +  I + NS I TGDDCI++ +GS  +    +TCGPGHGISIGSLG  
Sbjct: 260 HSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGDR 319

Query: 245 GEYSIVENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHST 304
              + V  + V    L  T NGLRIKT QGG G A+NI F+ I + +  N IIIDQ +  
Sbjct: 320 NSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCD 379

Query: 305 FAYSRKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQAR-CSNIVMEDVSIMTSTPGKE 362
                  Q   +KV +V Y  I GTS S  A+   C ++  C   ++ +++++    GKE
Sbjct: 380 SKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINLV-GNGGKE 438

[Close]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL
Match: A0A6J1CJJ6 (probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111011582 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.2e-157
Identity = 259/379 (68.34%), Postives = 312/379 (82.32%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SW+VS S +FNVLDYGAIGNG+TDDSQAFL+AW D CGA EGIP LH P+GK +MLNPLK
Sbjct: 18  SWVVSTSPNFNVLDYGAIGNGQTDDSQAFLRAWXDACGATEGIPALHAPVGKIYMLNPLK 77

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           F+GPC SKQV F L GT++AP+K +WPSD ++ WIQF DI+GL ++G+GQFDG+GS WWK
Sbjct: 78  FQGPCKSKQVIFHLGGTVVAPTKDSWPSDDRDRWIQFSDIDGLMVNGSGQFDGQGSSWWK 137

Query: 121 DCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 180
           DC  +C  PTAL  HNCNGLQL+E KHINSG++H SI ACND IISD+ I+AP+DSPNT 
Sbjct: 138 DCDKHCTRPTALFLHNCNGLQLREMKHINSGRNHISINACNDAIISDLHIMAPEDSPNTD 197

Query: 181 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 240
           GIDIS SNN+LIQNS + TGDDCI LNNGS+NI IVGVTCGPGHGISIGSLG +G+Y++V
Sbjct: 198 GIDISGSNNVLIQNSFMGTGDDCIALNNGSTNINIVGVTCGPGHGISIGSLGENGQYNVV 257

Query: 241 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 300
           E+I+V NCLLKGTQNG+RIKT Q GYGYAR ITFE+ITL+D +N IIIDQ +S  A ++K
Sbjct: 258 EDIHVKNCLLKGTQNGVRIKTWQNGYGYARGITFEQITLIDVKNPIIIDQYYSDLAKAQK 317

Query: 301 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQN 360
            + + IKV DVTYRE+HGTS + NAI+L C ++RCSNI+ME+VSI    P KE +  CQN
Sbjct: 318 NRLLPIKVSDVTYREVHGTSANENAIILNCSRSRCSNIIMENVSIKNIDPXKEAKXLCQN 377

Query: 361 VNGREESTVPSVSCLSKSN 380
           V+GR  S +PSV CLSK N
Sbjct: 378 VDGRSTSAIPSVPCLSKQN 396

[Close]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL
Match: A0A6J1CIX8 (probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111011581 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.8e-152
Identity = 261/376 (69.41%), Postives = 307/376 (81.65%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SWIVSAS  FNVLDYGAIGNG+ DDSQAFL+AW DVCGA EGIPTLH P GK +ML PLK
Sbjct: 18  SWIVSASPSFNVLDYGAIGNGQADDSQAFLRAWNDVCGATEGIPTLHAPHGKIYMLKPLK 77

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           F+GPC SKQV F L+GT++AP KG+WP   +E WIQF DI+GL ++GTGQFDG+GS WW+
Sbjct: 78  FQGPCKSKQVTFHLKGTLVAPKKGSWPKYDRERWIQFSDIDGLIVNGTGQFDGQGSSWWE 137

Query: 121 DCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 180
           D   +CQ PTAL  HNCNGLQL+E KHINS K+H SI ACND IISD+ IIAP+DSPNT 
Sbjct: 138 D-WEHCQRPTALFLHNCNGLQLREMKHINSAKNHISINACNDVIISDLHIIAPEDSPNTD 197

Query: 181 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 240
           GID+S+SNN+LIQNS + TGDDCI LNNGSSNI IVGVTCGPGHGISIGSLGG+ EY++V
Sbjct: 198 GIDVSRSNNVLIQNSFMGTGDDCIALNNGSSNIDIVGVTCGPGHGISIGSLGGNREYNVV 257

Query: 241 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 300
           ENI+V NCLLKGTQNG+RIKT QGGYGYARNITFE+ITLM  +N IIIDQ ++ F +S  
Sbjct: 258 ENIHVKNCLLKGTQNGMRIKTWQGGYGYARNITFEQITLMGAKNPIIIDQYYTDF-FSIF 317

Query: 301 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQN 360
            Q  +IKV +VTYRE++GTS + NAI+L C + RCSNI++E+VSI    P  E +AFCQN
Sbjct: 318 FQLFDIKVSNVTYREVNGTSANENAIILNCSRNRCSNIILENVSIKPIDPKMEAKAFCQN 377

Query: 361 VNGREESTVPSVSCLS 377
           V+GR    VP+V CLS
Sbjct: 378 VDGRSTYAVPTVPCLS 391

[Close]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL
Match: A0A0A0KZ95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025750 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 3.2e-148
Identity = 251/380 (66.05%), Postives = 305/380 (80.26%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SW V  SSDFNVLDYGAIGNGKTDDS+AFLKAW DVCGA E  PTLHVP GKT++LNPLK
Sbjct: 18  SWTVLGSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEESPTLHVPDGKTYLLNPLK 77

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           F+GPC SKQ    L GT++AP+K  W SD K  WIQF DI GL L G G+FDG+GS WWK
Sbjct: 78  FQGPCKSKQ----LGGTLMAPTKDEWISDGKGQWIQFFDIEGLNLQGGGRFDGQGSLWWK 137

Query: 121 DC-HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNT 180
           DC H +C+ PTAL FHNCNGLQ+K  KHINS K+H SI  C+D I S + I AP+DSPNT
Sbjct: 138 DCDHKHCKRPTALFFHNCNGLQMKGMKHINSAKNHISINMCHDVIFSHLHISAPEDSPNT 197

Query: 181 YGIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSI 240
            GIDIS+S NI I++S + TGDDCI +NNGSSNI I G+TCGPGHGISIGSLG DGEY++
Sbjct: 198 DGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITCGPGHGISIGSLGKDGEYNV 257

Query: 241 VENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSR 300
           VEN++VSNCLL+ TQNG+RIKT +GGYGYA+NITFEKIT+ + +N IIIDQ +S++AYSR
Sbjct: 258 VENVHVSNCLLRSTQNGIRIKTWEGGYGYAKNITFEKITMKNAKNPIIIDQYYSSYAYSR 317

Query: 301 KAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQ 360
           K + M+IKV DVTYRE++GTS + +AI   C QARCSNI++++V+I  + PG++ +A CQ
Sbjct: 318 KMKGMDIKVSDVTYREVNGTSANEDAITFNCSQARCSNIILDNVNIKMTNPGEKAKAVCQ 377

Query: 361 NVNGREESTVPSVSCLSKSN 380
           N +G+  S VP VSCLSKS+
Sbjct: 378 NADGKVLSAVPPVSCLSKSH 393

[Close]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL
Match: A0A5D3CYS8 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00190 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 7.2e-148
Identity = 245/377 (64.99%), Postives = 305/377 (80.90%), Query Frame = 0


Query: 4   VSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEG 63
           V +SSDFNVLDYGAIGNGKTDDS+AFLKAW DVCGA +  PTLHVP GKT++L+PLKF+G
Sbjct: 21  VLSSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATQDSPTLHVPDGKTYLLSPLKFQG 80

Query: 64  PCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC- 123
           PC S QV F+L GT++AP+K  WP+D K  W+QF+D+ GL + G G+FDG+GS WWK C 
Sbjct: 81  PCKSNQVIFDLGGTLMAPTKDEWPNDGKSKWVQFVDVEGLNVQGGGRFDGQGSCWWKGCD 140

Query: 124 HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGI 183
           H  C+ PTAL FHNCNGLQ+   KH+NS K+H SI  CND I S + I AP+DSPNT GI
Sbjct: 141 HKQCKRPTALFFHNCNGLQMNGMKHVNSAKNHISINLCNDVIFSHLHISAPEDSPNTDGI 200

Query: 184 DISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVEN 243
           DIS+S NI IQ+S I TGDDC+ +NNGSSNI I  +TCGPGHGISIGSLG DGEY++VEN
Sbjct: 201 DISQSTNIFIQDSFIGTGDDCVAINNGSSNININTITCGPGHGISIGSLGKDGEYNVVEN 260

Query: 244 IYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQ 303
           ++VSNCLL+ TQNG+RIKT +GGYGYA+NITFEKITL +++N IIIDQ ++++AYSRK +
Sbjct: 261 VHVSNCLLRNTQNGIRIKTWEGGYGYAKNITFEKITLKNSKNPIIIDQYYTSYAYSRKIK 320

Query: 304 AMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQNVN 363
            M+IKV DVTYRE++GTS +  AI   C QARCSNI++++V+I  + PG+E +A CQNV+
Sbjct: 321 GMDIKVSDVTYREVNGTSANEEAITFNCSQARCSNIILDNVNIKMTNPGEEAKAVCQNVD 380

Query: 364 GREESTVPSVSCLSKSN 380
           G+  S VP VSCLSKS+
Sbjct: 381 GKVLSAVPPVSCLSKSH 397

[Close]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL
Match: A0A6J1GVS6 (probable polygalacturonase At3g15720 OS=Cucurbita moschata OX=3662 GN=LOC111457994 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.8e-144
Identity = 241/376 (64.10%), Postives = 299/376 (79.52%), Query Frame = 0


Query: 5   SASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGP 64
           SASS FNVLDYGA GNGKTDDS+AFLKAW D C + E  PTL VP GKTF+LNPLKF+GP
Sbjct: 22  SASSYFNVLDYGADGNGKTDDSEAFLKAWNDACASTEDNPTLRVPSGKTFLLNPLKFQGP 81

Query: 65  CNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWW-KDCH 124
           C SK+++F+L G ++APSK  W SD  + WIQF DI+ LT+ G GQFDG+GS WW KDCH
Sbjct: 82  CKSKRINFDLGGIVMAPSKDEWSSDGVDKWIQFYDIDSLTVKGDGQFDGQGSSWWDKDCH 141

Query: 125 SNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGID 184
            +C+ PTA+ FHNCN L L +TKH+NSG++H SI +CND IISDI I AP +SPNT GID
Sbjct: 142 KHCKRPTAIFFHNCNRLHLSKTKHVNSGRNHMSINSCNDVIISDIHITAPNESPNTDGID 201

Query: 185 ISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVENI 244
           IS S N+ I +S I TGDDCI +N+GSSNI I+G+TCGPGHGISIGSLG +G+Y++VEN+
Sbjct: 202 ISGSKNVRILDSFIGTGDDCIAINDGSSNIDIIGLTCGPGHGISIGSLGKNGDYNVVENV 261

Query: 245 YVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQA 304
           YVS C+L+ TQNG+RIKT +GGYGYA+NITFEKITL + +N IIIDQ ++ +AY RK + 
Sbjct: 262 YVSECILQDTQNGVRIKTWEGGYGYAKNITFEKITLENVKNPIIIDQHYTAYAYGRKNKG 321

Query: 305 MNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQNVNG 364
             IKV DVTYR++HGTS +  AI L C +ARC+NI+ME+V+I TST  +E ++FCQN +G
Sbjct: 322 REIKVSDVTYRDVHGTSANEKAITLDCSRARCTNIIMEEVNITTSTSDEEAKSFCQNADG 381

Query: 365 REESTVPSVSCLSKSN 380
              STVP V CLSKS+
Sbjct: 382 ESTSTVPPVPCLSKSH 397

[Close]

BLAST of Lsi03G010210 vs. NCBI nr
Match: KAG7014943.1 (putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 583.9 bits (1504), Expect = 9.6e-163
Identity = 275/379 (72.56%), Postives = 321/379 (84.70%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SWIVSAS DFNVLDYGA+GNGKTDDSQAFLKAWKDVC A  GIPTL VPIGKT++L PLK
Sbjct: 79  SWIVSASFDFNVLDYGAVGNGKTDDSQAFLKAWKDVCRATIGIPTLRVPIGKTYLLKPLK 138

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           FEGPCN K+VHFE+RGTI+APS  AW S ++ENWIQFLDI GL ++G GQFDG+ S WWK
Sbjct: 139 FEGPCNPKRVHFEVRGTIMAPSVAAWRSHNEENWIQFLDIAGLNINGAGQFDGQSSSWWK 198

Query: 121 DCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 180
           DCHSNC  PTAL F NC GL+L+ETKHINS K+H SI ACND +IS++ IIAP++ PNTY
Sbjct: 199 DCHSNCTPPTALFFQNCTGLRLRETKHINSVKNHISINACNDVVISNVHIIAPENIPNTY 258

Query: 181 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 240
           G +IS+SNN+LIQNS IETGD+CI+L NGSSNI IVGVTCGPG+GISI SLG DG Y+++
Sbjct: 259 GFNISRSNNVLIQNSLIETGDECISLYNGSSNINIVGVTCGPGYGISIRSLGEDGGYNVI 318

Query: 241 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 300
           ENI VSNC LKGTQNGLRIKT +GG+GY RN+ ++KITL+DTQ  I+IDQ +STFA +RK
Sbjct: 319 ENINVSNCTLKGTQNGLRIKTTKGGHGYVRNVVYKKITLIDTQLPIVIDQQYSTFANTRK 378

Query: 301 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQN 360
            + M IKV DVTYREIHG ST+ + ++L C Q RCSNIVMEDVSI TS+P K+V+AFCQN
Sbjct: 379 IKEMGIKVMDVTYREIHGISTNESTVILNCSQTRCSNIVMEDVSIRTSSPKKQVKAFCQN 438

Query: 361 VNGREESTVPSVSCLSKSN 380
           V+GR  STVP VSCLSKSN
Sbjct: 439 VDGRAVSTVPIVSCLSKSN 457

[Close]

BLAST of Lsi03G010210 vs. NCBI nr
Match: XP_023552846.1 (probable polygalacturonase At3g15720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.2 bits (1484), Expect = 2.0e-160
Identity = 270/377 (71.62%), Postives = 315/377 (83.55%), Query Frame = 0


Query: 3   IVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFE 62
           +  +SSDFNVLDYGA+GNGKTDDSQAFLKAWKDVC A  GIPTL VPIGKT++L PLKFE
Sbjct: 75  LAESSSDFNVLDYGAVGNGKTDDSQAFLKAWKDVCRASTGIPTLRVPIGKTYLLKPLKFE 134

Query: 63  GPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC 122
           GPCN K+VHFE+RGTI+APS  AW S ++ENWIQFLDI GL ++G GQFDG+ S WWKDC
Sbjct: 135 GPCNPKRVHFEVRGTIMAPSVAAWRSHNEENWIQFLDIAGLNINGAGQFDGQSSSWWKDC 194

Query: 123 HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGI 182
           HSNC  PTAL F NC GLQL+ETKHINS K+H S+ ACND +IS++ IIAP++ PNTYG 
Sbjct: 195 HSNCTPPTALFFQNCTGLQLRETKHINSVKNHISLNACNDVVISNVHIIAPENIPNTYGF 254

Query: 183 DISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVEN 242
           +IS+SNN+LIQNS IETGD+CI+L NGSSNI IVGVTCGPG+GISI SLG DG Y+++EN
Sbjct: 255 NISRSNNVLIQNSLIETGDECISLYNGSSNINIVGVTCGPGYGISIRSLGEDGGYNVIEN 314

Query: 243 IYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQ 302
           I VSNC LKGTQNGLRIKT +GG+GY RN+ +EKITL+DTQ  I+IDQ +ST A +RK +
Sbjct: 315 INVSNCTLKGTQNGLRIKTTKGGHGYVRNVIYEKITLIDTQLPIVIDQQYSTLANTRKIK 374

Query: 303 AMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQNVN 362
            M IKV DVTYREIHG ST+   ++L C Q RCSNIVMEDVSI  S PGKEV+AFCQNV+
Sbjct: 375 EMGIKVMDVTYREIHGISTNETTVILNCSQTRCSNIVMEDVSIQMSAPGKEVKAFCQNVD 434

Query: 363 GREESTVPSVSCLSKSN 380
           GR  STVP V+CLSKSN
Sbjct: 435 GRAVSTVPIVTCLSKSN 451

[Close]

BLAST of Lsi03G010210 vs. NCBI nr
Match: XP_022141108.1 (probable polygalacturonase At3g15720 [Momordica charantia])

HSP 1 Score: 565.1 bits (1455), Expect = 4.6e-157
Identity = 259/379 (68.34%), Postives = 312/379 (82.32%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SW+VS S +FNVLDYGAIGNG+TDDSQAFL+AW D CGA EGIP LH P+GK +MLNPLK
Sbjct: 18  SWVVSTSPNFNVLDYGAIGNGQTDDSQAFLRAWXDACGATEGIPALHAPVGKIYMLNPLK 77

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           F+GPC SKQV F L GT++AP+K +WPSD ++ WIQF DI+GL ++G+GQFDG+GS WWK
Sbjct: 78  FQGPCKSKQVIFHLGGTVVAPTKDSWPSDDRDRWIQFSDIDGLMVNGSGQFDGQGSSWWK 137

Query: 121 DCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 180
           DC  +C  PTAL  HNCNGLQL+E KHINSG++H SI ACND IISD+ I+AP+DSPNT 
Sbjct: 138 DCDKHCTRPTALFLHNCNGLQLREMKHINSGRNHISINACNDAIISDLHIMAPEDSPNTD 197

Query: 181 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 240
           GIDIS SNN+LIQNS + TGDDCI LNNGS+NI IVGVTCGPGHGISIGSLG +G+Y++V
Sbjct: 198 GIDISGSNNVLIQNSFMGTGDDCIALNNGSTNINIVGVTCGPGHGISIGSLGENGQYNVV 257

Query: 241 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 300
           E+I+V NCLLKGTQNG+RIKT Q GYGYAR ITFE+ITL+D +N IIIDQ +S  A ++K
Sbjct: 258 EDIHVKNCLLKGTQNGVRIKTWQNGYGYARGITFEQITLIDVKNPIIIDQYYSDLAKAQK 317

Query: 301 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQN 360
            + + IKV DVTYRE+HGTS + NAI+L C ++RCSNI+ME+VSI    P KE +  CQN
Sbjct: 318 NRLLPIKVSDVTYREVHGTSANENAIILNCSRSRCSNIIMENVSIKNIDPXKEAKXLCQN 377

Query: 361 VNGREESTVPSVSCLSKSN 380
           V+GR  S +PSV CLSK N
Sbjct: 378 VDGRSTSAIPSVPCLSKQN 396

[Close]

BLAST of Lsi03G010210 vs. NCBI nr
Match: XP_038888676.1 (probable polygalacturonase At3g15720 [Benincasa hispida])

HSP 1 Score: 558.5 bits (1438), Expect = 4.3e-155
Identity = 260/378 (68.78%), Postives = 317/378 (83.86%), Query Frame = 0


Query: 3   IVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFE 62
           IVSASS+FNVLDYGAIGNGK DDS+AFLKAW DVCGA E  PTLHVP GKT++LNPLKF+
Sbjct: 20  IVSASSNFNVLDYGAIGNGKADDSEAFLKAWNDVCGATEDSPTLHVPDGKTYLLNPLKFQ 79

Query: 63  GPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC 122
           GPC S QV+F+LRGT++APSK  WPSD  + W+QF DI GL L G G+FDG+GS WWKDC
Sbjct: 80  GPCKSNQVNFDLRGTLMAPSKDEWPSDGADKWVQFYDIEGLNLKGAGKFDGQGSLWWKDC 139

Query: 123 -HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYG 182
              +C+ PTAL FHNCNGLQ+KE KHINSG++H SI  CND I S+IQI+AP++SPNT G
Sbjct: 140 DRKHCKRPTALFFHNCNGLQVKEMKHINSGRNHISINDCNDVIFSNIQILAPEESPNTDG 199

Query: 183 IDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVE 242
           IDISKS N+LIQ+S I TGDDCI +N GSS+I I+G+TCGPGHGISIGSLG DG Y++VE
Sbjct: 200 IDISKSKNVLIQDSFIATGDDCIAINEGSSDINIIGITCGPGHGISIGSLGKDGAYNVVE 259

Query: 243 NIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKA 302
           NI+VSNCLL+GTQNG+RIKT QGGYGYA+NITFEKITL + +N IIIDQ ++++AYSRK 
Sbjct: 260 NIHVSNCLLQGTQNGVRIKTWQGGYGYAKNITFEKITLKNAKNPIIIDQYYTSYAYSRKI 319

Query: 303 QAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQNV 362
           + M+IKV DVTYRE++GTS + +AI L C +ARC+NI++++V+I   T GKE +A CQNV
Sbjct: 320 KGMDIKVSDVTYREVNGTSANEDAITLNCSRARCTNIILDNVNIKMITLGKEAKAICQNV 379

Query: 363 NGREESTVPSVSCLSKSN 380
           +G+  STVP VSCLSKS+
Sbjct: 380 DGKFLSTVPIVSCLSKSH 397

[Close]

BLAST of Lsi03G010210 vs. NCBI nr
Match: XP_022141107.1 (probable polygalacturonase At3g15720 [Momordica charantia])

HSP 1 Score: 548.1 bits (1411), Expect = 5.9e-152
Identity = 261/376 (69.41%), Postives = 307/376 (81.65%), Query Frame = 0


Query: 1   SWIVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLK 60
           SWIVSAS  FNVLDYGAIGNG+ DDSQAFL+AW DVCGA EGIPTLH P GK +ML PLK
Sbjct: 18  SWIVSASPSFNVLDYGAIGNGQADDSQAFLRAWNDVCGATEGIPTLHAPHGKIYMLKPLK 77

Query: 61  FEGPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWK 120
           F+GPC SKQV F L+GT++AP KG+WP   +E WIQF DI+GL ++GTGQFDG+GS WW+
Sbjct: 78  FQGPCKSKQVTFHLKGTLVAPKKGSWPKYDRERWIQFSDIDGLIVNGTGQFDGQGSSWWE 137

Query: 121 DCHSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTY 180
           D   +CQ PTAL  HNCNGLQL+E KHINS K+H SI ACND IISD+ IIAP+DSPNT 
Sbjct: 138 D-WEHCQRPTALFLHNCNGLQLREMKHINSAKNHISINACNDVIISDLHIIAPEDSPNTD 197

Query: 181 GIDISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIV 240
           GID+S+SNN+LIQNS + TGDDCI LNNGSSNI IVGVTCGPGHGISIGSLGG+ EY++V
Sbjct: 198 GIDVSRSNNVLIQNSFMGTGDDCIALNNGSSNIDIVGVTCGPGHGISIGSLGGNREYNVV 257

Query: 241 ENIYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRK 300
           ENI+V NCLLKGTQNG+RIKT QGGYGYARNITFE+ITLM  +N IIIDQ ++ F +S  
Sbjct: 258 ENIHVKNCLLKGTQNGMRIKTWQGGYGYARNITFEQITLMGAKNPIIIDQYYTDF-FSIF 317

Query: 301 AQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQARCSNIVMEDVSIMTSTPGKEVQAFCQN 360
            Q  +IKV +VTYRE++GTS + NAI+L C + RCSNI++E+VSI    P  E +AFCQN
Sbjct: 318 FQLFDIKVSNVTYREVNGTSANENAIILNCSRNRCSNIILENVSIKPIDPKMEAKAFCQN 377

Query: 361 VNGREESTVPSVSCLS 377
           V+GR    VP+V CLS
Sbjct: 378 VDGRSTYAVPTVPCLS 391

[Close]

BLAST of Lsi03G010210 vs. TAIR 10
Match: AT3G15720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-93
Identity = 183/383 (47.78%), Postives = 237/383 (61.88%), Query Frame = 0


Query: 3   IVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFE 62
           I ++S+  +V  +GA+G+G TDDSQAFLKAW+ VC    G     VP G TFML PLKF+
Sbjct: 17  IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMTFMLQPLKFQ 76

Query: 63  GPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC 122
           G C S  V  ++ G ++APSKG W  D K+ WI F DI GL + G G+ +G+GS WW+  
Sbjct: 77  GSCKSTPVFVQMLGKLVAPSKGNWKGD-KDQWILFTDIEGLVIEGDGEINGQGSSWWEHK 136

Query: 123 HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGI 182
            S    PTAL F +CN L+L    H++S  +H  I  CN   IS ++I AP+ SPNT GI
Sbjct: 137 GSR---PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGI 196

Query: 183 DISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVEN 242
           D+  S+N++IQ+  I TGDDCI +N+G+SNI I G+ CGPGHGISIGSLG DGE + VEN
Sbjct: 197 DVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVEN 256

Query: 243 IYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDH----STFAYS 302
           + V NC  +GT NG RIKT QGG GYAR ITF  ITL + +N IIIDQ +    S  A  
Sbjct: 257 VCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKD 316

Query: 303 RKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMT--STPGKEVQ 362
           RK+ A  ++V  V +    GTS S   +  +C +   C+ I + D+ I T  S  G+  Q
Sbjct: 317 RKSSA--VEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQ 376

Query: 363 AFCQNVNGREESTVPSVSCLSKS 379
             C NV G     VP + CL  S
Sbjct: 377 GQCLNVRGASTIAVPGLECLELS 392

[Close]

BLAST of Lsi03G010210 vs. TAIR 10
Match: AT3G15720.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 332.0 bits (850), Expect = 6.2e-91
Identity = 181/383 (47.26%), Postives = 235/383 (61.36%), Query Frame = 0


Query: 3   IVSASSDFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFE 62
           I ++S+  +V  +GA+G+G TDDSQAFLKAW+ VC    G     VP G TFML PLKF+
Sbjct: 16  IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMTFMLQPLKFQ 75

Query: 63  GPCNSKQVHFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDC 122
           G C S  V  ++ G ++APSKG W  D K+ WI F DI GL + G G+ +G+GS WW+  
Sbjct: 76  GSCKSTPVFVQMLGKLVAPSKGNWKGD-KDQWILFTDIEGLVIEGDGEINGQGSSWWEHK 135

Query: 123 HSNCQTPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGI 182
            S    PT   F +CN L+L    H++S  +H  I  CN   IS ++I AP+ SPNT GI
Sbjct: 136 GSR---PT---FRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGI 195

Query: 183 DISKSNNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVEN 242
           D+  S+N++IQ+  I TGDDCI +N+G+SNI I G+ CGPGHGISIGSLG DGE + VEN
Sbjct: 196 DVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVEN 255

Query: 243 IYVSNCLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDH----STFAYS 302
           + V NC  +GT NG RIKT QGG GYAR ITF  ITL + +N IIIDQ +    S  A  
Sbjct: 256 VCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKD 315

Query: 303 RKAQAMNIKVKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMT--STPGKEVQ 362
           RK+ A  ++V  V +    GTS S   +  +C +   C+ I + D+ I T  S  G+  Q
Sbjct: 316 RKSSA--VEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQ 375

Query: 363 AFCQNVNGREESTVPSVSCLSKS 379
             C NV G     VP + CL  S
Sbjct: 376 GQCLNVRGASTIAVPGLECLELS 388

[Close]

BLAST of Lsi03G010210 vs. TAIR 10
Match: AT4G35670.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 3.4e-89
Identity = 167/362 (46.13%), Postives = 229/362 (63.26%), Query Frame = 0


Query: 9   DFNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCNSK 68
           ++NVL++ A G+G+TDDS+AFL+AW   CG    I TL +P GKTF+L P  F+GPC S 
Sbjct: 23  NYNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSS 82

Query: 69  QVHFELRGTIIAPS-KGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDCHSNCQ 128
            +  +L GTI+APS K AW       WI+F  ++GL + G+G  D RGS +W+      Q
Sbjct: 83  SIKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWELNLKASQ 142

Query: 129 TPTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGIDISKS 188
            PTAL    C+ L++     I+S K+H SI+ CN   IS+I + AP+ SPNT GIDIS S
Sbjct: 143 RPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDS 202

Query: 189 NNILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVENIYVSN 248
            NI I +S I+TGDDCI +N+GSSNI I G+ CGPGHGIS+GSLG  G  + V ++ V++
Sbjct: 203 TNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVTH 262

Query: 249 CLLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQAMNIK 308
           C    T NG RIKT  GG GYARNI+F  ITL++T+N IIIDQ +      R  +   + 
Sbjct: 263 CTFNQTTNGARIKTWLGGQGYARNISFTDITLVNTKNPIIIDQHY--IDKGRLTEESAVA 322

Query: 309 VKDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMTSTPGKEVQAFCQNVNGREE 368
           + +V + +  GTS++ NAI LKC +   C ++VM+ + I  +  GK  +  CQ V+G   
Sbjct: 323 ISNVKFVDFRGTSSNKNAITLKCSETTHCVDVVMDGIDITMANGGKP-KVNCQYVDGESS 381

[Close]

BLAST of Lsi03G010210 vs. TAIR 10
Match: AT5G27530.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 3.4e-89
Identity = 165/372 (44.35%), Postives = 230/372 (61.83%), Query Frame = 0


Query: 10  FNVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCNSKQ 69
           +NVL +GA G+G+TDDS AFL+AW   CG  E I TL +P GKT++L P++F+GPC S  
Sbjct: 53  YNVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFIPSGKTYLLQPIEFKGPCKSTS 112

Query: 70  VHFELRGTIIAPSK-GAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDCHSNCQT 129
           +  +L G I+APS   +W +   + WI F  + GL + G+G  +GRGS +W+        
Sbjct: 113 IKLQLDGIIVAPSNITSWSNPKSQTWISFSGVPGLMIDGSGTINGRGSSFWE-------- 172

Query: 130 PTALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGIDISKSN 189
             AL   NCN L +     I+S KSH SI+ C+   IS I I+AP++SPNT GIDIS S 
Sbjct: 173 --ALHICNCNNLTINGITSIDSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYST 232

Query: 190 NILIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVENIYVSNC 249
           N+ I +S I+TGDDCI +N GSS+I I  V CGPGHGIS+GSLG DGE + V ++YV+ C
Sbjct: 233 NVNIFDSTIQTGDDCIAINTGSSSINITQVNCGPGHGISVGSLGADGENAAVSDVYVTQC 292

Query: 250 LLKGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDHSTFAYSRKAQAMNIKV 309
               T NG RIKT QGG GYARNI+FE ITL++ QN IIIDQ ++        +   + +
Sbjct: 293 TFNKTTNGARIKTWQGGQGYARNISFENITLINVQNPIIIDQQYTDKVLLDATKDSAVAI 352

Query: 310 KDVTYREIHGTSTSHNAIVLKCCQ-ARCSNIVMEDVSIMTSTPGKEVQAFCQNVNGREES 369
             V Y    GT+ + +AI+LKC     C ++V++D+ + T   G++ +  C+NV G    
Sbjct: 353 SSVKYVGFQGTTLNEDAIMLKCSAITYCKDMVIDDIEV-TMENGEKPKVECENVEGESSD 412

Query: 370 TVPSVSCLSKSN 380
                 C + ++
Sbjct: 413 NDLMRECFNSNS 413

[Close]

BLAST of Lsi03G010210 vs. TAIR 10
Match: AT5G17200.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 313.5 bits (802), Expect = 2.3e-85
Identity = 162/375 (43.20%), Postives = 226/375 (60.27%), Query Frame = 0


Query: 11  NVLDYGAIGNGKTDDSQAFLKAWKDVCGAMEGIPTLHVPIGKTFMLNPLKFEGPCNSKQV 70
           +V  +GAIG+GKTDD++AFLKAW+ VC        L VP GKTFML PL F GPC S  +
Sbjct: 40  SVTSFGAIGDGKTDDTKAFLKAWEAVCKGGHNRKIL-VPQGKTFMLKPLTFIGPCKSSTI 99

Query: 71  HFELRGTIIAPSKGAWPSDSKENWIQFLDINGLTLSGTGQFDGRGSFWWKDCHSNCQTPT 130
              +RG ++AP    W +     WI F  INGL ++G G  DGRGS WW + ++    P 
Sbjct: 100 SLSIRGNLVAPGY-TWYAGRYTTWISFDSINGLVVTGGGTIDGRGSLWWGNVNNR---PC 159

Query: 131 ALSFHNCNGLQLKETKHINSGKSHFSIEACNDGIISDIQIIAPKDSPNTYGIDISKSNNI 190
           A+ F+NCNGL++   +H+NS ++H  +    +  +  +++ AP DSPNT GIDIS    +
Sbjct: 160 AMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDGIDISNCIGV 219

Query: 191 LIQNSAIETGDDCITLNNGSSNIKIVGVTCGPGHGISIGSLGGDGEYSIVENIYVSNCLL 250
            I +S I TGDDCI +N+GSS+I I G+ CGPGHGIS+GSLG  G++  VE + V NC  
Sbjct: 220 HIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFETVEEVRVKNCTF 279

Query: 251 KGTQNGLRIKTLQGGYGYARNITFEKITLMDTQNSIIIDQDH-----------STFAYSR 310
             TQNG+RIKT Q G GYAR I+FE I ++ ++N IIIDQ +           S+ +Y  
Sbjct: 280 TKTQNGVRIKTYQNGSGYARKISFEDINMVASENPIIIDQTYHNGGTNGGISKSSSSYQN 339

Query: 311 ----------KAQAMNIKVKDVTYREIHGTSTSHNAIVLKC-CQARCSNIVMEDVSIMTS 364
                           +KV DV Y  I G+S S   I L C     CS+IVM++V+++++
Sbjct: 340 CHLTAKQRTPSGNGKGVKVTDVRYARIRGSSASDQDITLNCDADLGCSDIVMDNVNMVSA 399

The following BLAST results are available for this feature:

BLAST of Lsi03G010210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW07	1.9e-92	47.78	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
O23147	2.5e-73	41.94	Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1	[more]
Q8RY29	3.7e-72	42.43	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
Q9SFB7	6.2e-72	40.49	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]
Q02096	2.7e-67	39.67	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]

BLAST of Lsi03G010210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJJ6	2.2e-157	68.34	probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1CIX8	2.8e-152	69.41	probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KZ95	3.2e-148	66.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025750 PE=3 SV=1	[more]
A0A5D3CYS8	7.2e-148	64.99	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1GVS6	2.8e-144	64.10	probable polygalacturonase At3g15720 OS=Cucurbita moschata OX=3662 GN=LOC1114579...	[more]

BLAST of Lsi03G010210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014943.1	9.6e-163	72.56	putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552846.1	2.0e-160	71.62	probable polygalacturonase At3g15720 [Cucurbita pepo subsp. pepo]	[more]
XP_022141108.1	4.6e-157	68.34	probable polygalacturonase At3g15720 [Momordica charantia]	[more]
XP_038888676.1	4.3e-155	68.78	probable polygalacturonase At3g15720 [Benincasa hispida]	[more]
XP_022141107.1	5.9e-152	69.41	probable polygalacturonase At3g15720 [Momordica charantia]	[more]

BLAST of Lsi03G010210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15720.1	1.3e-93	47.78	Pectin lyase-like superfamily protein	[more]
AT3G15720.2	6.2e-91	47.26	Pectin lyase-like superfamily protein	[more]
AT4G35670.1	3.4e-89	46.13	Pectin lyase-like superfamily protein	[more]
AT5G27530.1	3.4e-89	44.35	Pectin lyase-like superfamily protein	[more]
AT5G17200.1	2.3e-85	43.20	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 210..230 e-value: 3900.0 score: 3.0 coord: 160..186 e-value: 300.0 score: 10.2 coord: 240..261 e-value: 44.0 score: 12.9 coord: 303..330 e-value: 6600.0 score: 1.4 coord: 187..208 e-value: 570.0 score: 9.0 coord: 269..290 e-value: 1200.0 score: 6.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 4..378 e-value: 1.3E-107 score: 362.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 44..362 e-value: 1.2E-81 score: 274.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 217..230
None	No IPR available	PANTHER	PTHR31375:SF232	SUBFAMILY NOT NAMED	coord: 4..375
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 4..375
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 6..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010210.1	Lsi03G010210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity