Lsi03G008150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G008150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SHI RELATED SEQUENCE 1
Location	chr03: 12302971 .. 12304271 (-)
RNA-Seq Expression	Lsi03G008150
Synteny	Lsi03G008150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGGTTGTTCTATTTAAGTGGGAAACAGGAGGAGGATGAAGAAGAAATTATGAGAGGAAGAGAACAACAATTGTTTTTGTATAGTAAAAACAATAATGAAGAGATCTATTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGACAATTACATTTCCTTTGGAGTTGTGGGGCCTACTAGGAAGAACTTGATCATCAATGCCTCCGATCATGAGTTTGTTTCGAGATTAGGGTTTTCGATGATGAGAGGAGGAGGAGGAGGAGGGGTGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGGTGTAGGACTTGTTGTAAGAGTCGAGGGTTTCACTGCCAAACCCATGTCAAGAGTACTTGGGTTCCAGCGGCCAAGCGTCGGGAAAGACAACAACAACGTCATCAGCTTGTGCAGCATCACCACCGACAACAATTTCAAACAGATCAATCAGATCAGACCACTTCCAAAAGGCACGAAGAAAATCAACTACCACTTCCAACTCCAACTATCACTTCAGGTAATTCATCTTTAACAAGTTTAAGCTGATGGGTTATGGTAAATTTAATTTTTTTTTTTTTAAGTTCGAACAAACATGGGGTGGGAGGGTGTGGGGATCGATGATTTGAATCTCGAACTCGATGTTGTAATGGCTTAGATTGGTGGAGATGATTGCTTTTTGTGTGTTTCTTGATCTAATCAATATGGCTTGGAAATTAGGGTTAGAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTGTTTTTCGGTGTGTCAAAGTCAGTGCCATTGACAATGTAGAAGAACAATTAGCATATCAAACATCTGTGAACATTGGTGGGCATATGTTCAAAGGCATTCTTTATGACCACGGTCCCGAAACCTCTGGCGGAGAGAGCTCGTACTGCCATGACGGAGAAGACGATGGTCAAGCACTCGATCTAGTGATCGGAGCATCCAACGGCACCGGGAGAGTTAACCAATCATCATCTGCCCCATTTGTGGAGTCTTCACTATATCCCATCCCAATCAACACATTCAACACCGGTACGCAATTTTTTCCATCCACAAGAACATAAGAAAAATGGGGCTCATAAACTAGAAAAAAAAAAGAAAAAAAAAAAGCTTCCTTGATTTTATGATGTGTCGGATGAAGACATTGGAATAAAACAAAACAAGGTGATGCTATTTTAATTTAATTTACGTATGAGTATATGATAATCGACCCTACATTTTATTTGCATTCCCATATCATAAATTGGTAACGTATTGTT

mRNA sequence

ATGAAGGGGTTGTTCTATTTAAGTGGGAAACAGGAGGAGGATGAAGAAGAAATTATGAGAGGAAGAGAACAACAATTGTTTTTGTATAGTAAAAACAATAATGAAGAGATCTATTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGACAATTACATTTCCTTTGGAGTTGTGGGGCCTACTAGGAAGAACTTGATCATCAATGCCTCCGATCATGAGTTTGTTTCGAGATTAGGGTTTTCGATGATGAGAGGAGGAGGAGGAGGAGGGGTGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGGTGTAGGACTTGTTGGTTAGAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTGTTTTTCGGTGTGTCAAAGTCAGTGCCATTGACAATGTAGAAGAACAATTAGCATATCAAACATCTGTGAACATTGGTGGGCATATGTTCAAAGGCATTCTTTATGACCACGGTCCCGAAACCTCTGGCGGAGAGAGCTCGTACTGCCATGACGGAGAAGACGATGGTCAAGCACTCGATCTAGTGATCGGAGCATCCAACGGCACCGGGAGAGTTAACCAATCATCATCTGCCCCATTTGTGGAGTCTTCACTATATCCCATCCCAATCAACACATTCAACACCGGTACGCAATTTTTTCCATCCACAAGAACATAAGAAAAATGGGGCTCATAAACTAGAAAAAAAAAAGAAAAAAAAAAAGCTTCCTTGATTTTATGATGTGTCGGATGAAGACATTGGAATAAAACAAAACAAGGTGATGCTATTTTAATTTAATTTACGTATGAGTATATGATAATCGACCCTACATTTTATTTGCATTCCCATATCATAAATTGGTAACGTATTGTT

Coding sequence (CDS)

ATGAAGGGGTTGTTCTATTTAAGTGGGAAACAGGAGGAGGATGAAGAAGAAATTATGAGAGGAAGAGAACAACAATTGTTTTTGTATAGTAAAAACAATAATGAAGAGATCTATTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGACAATTACATTTCCTTTGGAGTTGTGGGGCCTACTAGGAAGAACTTGATCATCAATGCCTCCGATCATGAGTTTGTTTCGAGATTAGGGTTTTCGATGATGAGAGGAGGAGGAGGAGGAGGGGTGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGGTGTAGGACTTGTTGGTTAGAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTGTTTTTCGGTGTGTCAAAGTCAGTGCCATTGACAATGTAGAAGAACAATTAGCATATCAAACATCTGTGAACATTGGTGGGCATATGTTCAAAGGCATTCTTTATGACCACGGTCCCGAAACCTCTGGCGGAGAGAGCTCGTACTGCCATGACGGAGAAGACGATGGTCAAGCACTCGATCTAGTGATCGGAGCATCCAACGGCACCGGGAGAGTTAACCAATCATCATCTGCCCCATTTGTGGAGTCTTCACTATATCCCATCCCAATCAACACATTCAACACCGGTACGCAATTTTTTCCATCCACAAGAACATAA

Protein sequence

MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQQNVDNYISFGVVGPTRKNLIINASDHEFVSRLGFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTCWLEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETSGGESSYCHDGEDDGQALDLVIGASNGTGRVNQSSSAPFVESSLYPIPINTFNTGTQFFPSTRT

Homology

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BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.0e-33
Identity = 111/355 (31.27%), Postives = 152/355 (42.82%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGR------EQQLFLYSK-----NNNEEIYS--KGLEIWPQ 60
           M   F L G QE+  +EI   +          FLY       ++N+EI +  KG E+W  
Sbjct: 1   MANFFSLGGNQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGFELWQS 60

Query: 61  QNVDNY-------------------------ISFGVVGPTRKNLIINASDHEFVSRLGFS 120
            N   +                         +  G VGP+R    I+A DHE  SR GF 
Sbjct: 61  GNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLG-VGPSRSGFDISAGDHE-ASRSGFV 120

Query: 121 MMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC---------------W------------- 180
           MMR  GGGG++CQDCGNQAKKDC H+RCRTC               W             
Sbjct: 121 MMR-SGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQL 180

Query: 181 ------------------------------------------LEVAHFPAEFNSPAVFRC 234
                                                     LEV  FP++  + AVF+C
Sbjct: 181 AALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRTSAVFQC 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 105/313 (33.55%), Postives = 142/313 (45.37%), Query Frame = 0


Query: 11  QEEDEEEIM---RGREQQLFLYSKNNNEEIYSKGLEIWPQQNVDNYISFGVVGPTRKNLI 70
           Q  +++EIM   +  +Q+L LYS        + GL + P     N+  F + G T     
Sbjct: 73  QNHNQQEIMFQHQQHQQRLDLYSS-------AAGLGVGP----SNHNQFDISGETSTAGA 132

Query: 71  INASDHEFVSRLGFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC-------------- 130
             A+    +   G     GGG GGV+CQDCGNQAKKDCSH+RCRTC              
Sbjct: 133 GRAAAMMMIRSGG----SGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRS 192

Query: 131 -W-----------------------------------------------------LEVAH 190
            W                                                     LEV +
Sbjct: 193 TWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN 252

Query: 191 FPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETSGG------E 234
           FPAE +S AVFRCV+VS++++ EE+ AYQT+V+IGGH+FKGILYD GP +SGG       
Sbjct: 253 FPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVA 312

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BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.1e-30
Identity = 100/283 (35.34%), Postives = 131/283 (46.29%), Query Frame = 0


Query: 26  LFLYSKNNNEEIYSKGLEIWPQQNVDNYISFG--VVGPTRKNLIINASDHEFVSRLGFSM 85
           L L+   NN+EI  +  +   QQ +D Y S     VGP+ ++LI  +            M
Sbjct: 57  LELWQHPNNQEIIFQQQQ-QQQQRLDLYTSAAGLGVGPSNRSLIETSGG-------ALMM 116

Query: 86  MR-GGGGGGVNCQDCGNQAKKDCSHLRCRTC---------------W------------- 145
           MR G G GG +CQDCGNQ+KKDCSH+RCRTC               W             
Sbjct: 117 MRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQL 176

Query: 146 ----------------------------------------LEVAHFPAEFNSPAVFRCVK 205
                                                   LEV +FP E +S AVFRCV+
Sbjct: 177 STGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVR 236

Query: 206 VSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGP---ETSGGESSYCHDGEDDGQALDLVI 234
           VS++D+ EE+ AY+T+V+IGGH+FKG+LYD GP    +SGG S   +       A     
Sbjct: 237 VSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 296

[Close]

BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.9e-29
Identity = 115/354 (32.49%), Postives = 150/354 (42.37%), Query Frame = 0


Query: 1   MKGLFYLSG----KQEEDEEEIMRGREQQLFLYSKNNNEEIY--SKGLEIWP-------- 60
           M GLFYL G    KQ+  +E+     +   +LY     +EIY  +KG EI+P        
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYL--YKDEIYNNNKGFEIFPPQYFQQQQ 60

Query: 61  QQN----VDNYISFGVV---------GPTRKNLIIN-ASDHEFV--SRLGFSMMRGGGGG 120
           QQN      N  SFG+V           T ++L  N  SDHE V  S  GF++ R    G
Sbjct: 61  QQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---QG 120

Query: 121 GVNCQDCGNQAKKDCSHLRCRTC---------------W--------------------- 180
            +NCQDCGNQAKKDC H+RCRTC               W                     
Sbjct: 121 NMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRI 180

Query: 181 ------------------------------------------LEVAHFPAEFNSPAVFRC 233
                                                     LE +H P E +SPAVFRC
Sbjct: 181 RDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRC 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 112/368 (30.43%), Postives = 144/368 (39.13%), Query Frame = 0


Query: 1   MKGLFYLSGK------QEEDEEEIMRGREQQ-----LFLYSKNNNEEIY--SKGLEIWPQ 60
           M G FYL G+       ++D  ++ +    Q     L+LY     +EIY  +KG EIWP 
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLY----KDEIYNNNKGFEIWPP 60

Query: 61  QNVD------------------NYISFGVV--GPTRKN-------LIIN-ASDHEFVSRL 120
           Q                     N+ SFG+V  G +  N       L  N  SDHE     
Sbjct: 61  QYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHE---PG 120

Query: 121 GFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC---------------WLEVA------ 180
           GF++ R    GG+NCQDCGNQAKKDC H+RCRTC               W+  A      
Sbjct: 121 GFTVTR---QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERL 180

Query: 181 ------------------------------------------------------------ 234
                                                                       
Sbjct: 181 AQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEV 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL
Match: A0A0A0K1X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051450 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.3e-102
Identity = 214/317 (67.51%), Postives = 224/317 (70.66%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMR-GREQQLFLYS---KNNNEEIYSKGLEIWPQQNVDNYISF 60
           M+GL YL GKQEEDEEE +R GREQQLFLYS    NNNEEIYSKGLEIWPQQNV+NYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRG--GGGGGVNCQDCGNQAKKDCSHLRCRTC- 120
           GVVGPTRKNLIINASDHEFVSRLGFSMMRG  GGGGG+NCQDCGNQAKKDCSHLRCRTC 
Sbjct: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRTCC 120

Query: 121 --------------W--------------------------------------------- 180
                         W                                             
Sbjct: 121 KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQPLL 180

Query: 181 --------LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHG 234
                   L+VAHFPAEFNSPA FRCVKVSAIDNVEEQLAYQTSVN+GGHMFKGILYDHG
Sbjct: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL
Match: A0A5A7SQY1 (Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002930 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.0e-101
Identity = 215/319 (67.40%), Postives = 222/319 (69.59%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMR-GREQQLFLYS---KNNNEEIYSKGLEIWPQQNVDNYISF 60
           M+GL YL GKQEEDEEEI+R GREQQLFLYS    +NNEEIYSKGLEIWPQQNV+NYISF
Sbjct: 1   MRGLLYLGGKQEEDEEEILRSGREQQLFLYSSTNNHNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMR---GGGGGGVNCQDCGNQAKKDCSHLRCRTC 120
           GVVGPTRKNLIINASDHE VSRLGFSMMR   GGGGGG+NCQDCGNQAKKDCSHLRCRTC
Sbjct: 61  GVVGPTRKNLIINASDHELVSRLGFSMMRGGGGGGGGGMNCQDCGNQAKKDCSHLRCRTC 120

Query: 121 ---------------W-------------------------------------------- 180
                          W                                            
Sbjct: 121 CKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRYGENQPL 180

Query: 181 ---------LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 233
                    LEVAHFPAEFNSPA FRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH
Sbjct: 181 LATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL
Match: A0A1S3C0M5 (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103495466 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.0e-101
Identity = 215/319 (67.40%), Postives = 222/319 (69.59%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMR-GREQQLFLYS---KNNNEEIYSKGLEIWPQQNVDNYISF 60
           M+GL YL GKQEEDEEEI+R GREQQLFLYS    +NNEEIYSKGLEIWPQQNV+NYISF
Sbjct: 1   MRGLLYLGGKQEEDEEEILRSGREQQLFLYSSTNNHNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMR---GGGGGGVNCQDCGNQAKKDCSHLRCRTC 120
           GVVGPTRKNLIINASDHE VSRLGFSMMR   GGGGGG+NCQDCGNQAKKDCSHLRCRTC
Sbjct: 61  GVVGPTRKNLIINASDHELVSRLGFSMMRGGGGGGGGGMNCQDCGNQAKKDCSHLRCRTC 120

Query: 121 ---------------W-------------------------------------------- 180
                          W                                            
Sbjct: 121 CKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRYGENQPL 180

Query: 181 ---------LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 233
                    LEVAHFPAEFNSPA FRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH
Sbjct: 181 LATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL
Match: A0A6J1J314 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480884 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 191/308 (62.01%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQ-----QNVDNYIS 60
           M GL YL GKQE+D+E+  RGREQQLFLY+  NNEEIYSKGLEIWPQ     Q V+NYIS
Sbjct: 1   MTGLLYLGGKQEDDQEQ--RGREQQLFLYNSRNNEEIYSKGLEIWPQYGQQHQAVENYIS 60

Query: 61  FGVVGPTRKNLIINASDHEFVSRLGFSMMR-----GGGGGGVNCQDCGNQAKKDCSHLRC 120
           FG VGP+R NL+INASDHE      F+MMR     GGGGGG+NCQDCGNQAKKDCSHLRC
Sbjct: 61  FG-VGPSRMNLMINASDHE------FTMMRQGAATGGGGGGINCQDCGNQAKKDCSHLRC 120

Query: 121 RTC---------------W----------------------------------------- 180
           RTC               W                                         
Sbjct: 121 RTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRQQQFRPDQFDQTTHKCHRETQPSIPPAT 180

Query: 181 ----LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETS 234
               LE+AHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYDHGPETS
Sbjct: 181 VTSGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPETS 240

[Close]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL
Match: A0A6J1FN62 (protein SHI RELATED SEQUENCE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445787 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.8e-87
Identity = 189/309 (61.17%), Postives = 205/309 (66.34%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQ-----QNVDNYIS 60
           M GL YL GKQE+D+E+  RGREQQLFLY+  NNEEIYSKGLEIWPQ     Q V+NYIS
Sbjct: 1   MTGLLYLGGKQEDDQEQ--RGREQQLFLYNNRNNEEIYSKGLEIWPQYGQQHQAVENYIS 60

Query: 61  FGVVGPTRKNLIINASDHEFVSRLGFSMMR-----GGGGGGVNCQDCGNQAKKDCSHLRC 120
           FG VGP+R NL+INASDHE      F+MMR     GGGGGG+NCQDCGNQAKKDC+HLRC
Sbjct: 61  FG-VGPSRMNLMINASDHE------FTMMRQGAATGGGGGGINCQDCGNQAKKDCTHLRC 120

Query: 121 RTC---------------W----------------------------------------- 180
           RTC               W                                         
Sbjct: 121 RTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRQQQQFRPDQFDQTTPKRHRETQPSIPPA 180

Query: 181 -----LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPET 234
                LE+AHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYDHGPE+
Sbjct: 181 AVTSGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPES 240

[Close]

BLAST of Lsi03G008150 vs. NCBI nr
Match: XP_004137039.1 (protein EXPRESSION OF TERPENOIDS 1 [Cucumis sativus] >KGN43665.1 hypothetical protein Csa_017336 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 214/317 (67.51%), Postives = 224/317 (70.66%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMR-GREQQLFLYS---KNNNEEIYSKGLEIWPQQNVDNYISF 60
           M+GL YL GKQEEDEEE +R GREQQLFLYS    NNNEEIYSKGLEIWPQQNV+NYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRG--GGGGGVNCQDCGNQAKKDCSHLRCRTC- 120
           GVVGPTRKNLIINASDHEFVSRLGFSMMRG  GGGGG+NCQDCGNQAKKDCSHLRCRTC 
Sbjct: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRTCC 120

Query: 121 --------------W--------------------------------------------- 180
                         W                                             
Sbjct: 121 KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQPLL 180

Query: 181 --------LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHG 234
                   L+VAHFPAEFNSPA FRCVKVSAIDNVEEQLAYQTSVN+GGHMFKGILYDHG
Sbjct: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240

[Close]

BLAST of Lsi03G008150 vs. NCBI nr
Match: XP_038886896.1 (protein EXPRESSION OF TERPENOIDS 1-like [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 204/306 (66.67%), Postives = 217/306 (70.92%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQQNVDNYISFGVVG 60
           M+ L YL GKQE DEEE++RGREQQLFLYS NNNEEIYSKGLEIWPQQNV+NYISFGV+G
Sbjct: 1   MRKLLYLGGKQEVDEEEMIRGREQQLFLYSTNNNEEIYSKGLEIWPQQNVENYISFGVMG 60

Query: 61  PTRKNLIINASDHEFVSRLGFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC------- 120
           PTRKN +INASDHEFVSRLGF +MR GGGGG+NCQDCGNQAKKDCSHLRCRTC       
Sbjct: 61  PTRKNFVINASDHEFVSRLGFPVMR-GGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFH 120

Query: 121 --------W--------------------------------------------------- 180
                   W                                                   
Sbjct: 121 CQTHVKSTWVPAAKRRERQQQRHQIVQHHHRQQFQADQSDQTTPKRHGENQPPLVTPIVT 180

Query: 181 --LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETS-- 233
             LEVAHFP EFNS AVFRCVKVSAIDNVEEQLAYQTS+N+GGHMFKGILYDHG ETS  
Sbjct: 181 SGLEVAHFPTEFNSVAVFRCVKVSAIDNVEEQLAYQTSINVGGHMFKGILYDHGLETSQN 240

[Close]

BLAST of Lsi03G008150 vs. NCBI nr
Match: XP_008455259.1 (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0031525.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa] >TYK06978.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 215/319 (67.40%), Postives = 222/319 (69.59%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMR-GREQQLFLYS---KNNNEEIYSKGLEIWPQQNVDNYISF 60
           M+GL YL GKQEEDEEEI+R GREQQLFLYS    +NNEEIYSKGLEIWPQQNV+NYISF
Sbjct: 1   MRGLLYLGGKQEEDEEEILRSGREQQLFLYSSTNNHNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMR---GGGGGGVNCQDCGNQAKKDCSHLRCRTC 120
           GVVGPTRKNLIINASDHE VSRLGFSMMR   GGGGGG+NCQDCGNQAKKDCSHLRCRTC
Sbjct: 61  GVVGPTRKNLIINASDHELVSRLGFSMMRGGGGGGGGGMNCQDCGNQAKKDCSHLRCRTC 120

Query: 121 ---------------W-------------------------------------------- 180
                          W                                            
Sbjct: 121 CKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRYGENQPL 180

Query: 181 ---------LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 233
                    LEVAHFPAEFNSPA FRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH
Sbjct: 181 LATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 240

[Close]

BLAST of Lsi03G008150 vs. NCBI nr
Match: XP_022981873.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022981874.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 332.8 bits (852), Expect = 2.4e-87
Identity = 191/308 (62.01%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQ-----QNVDNYIS 60
           M GL YL GKQE+D+E+  RGREQQLFLY+  NNEEIYSKGLEIWPQ     Q V+NYIS
Sbjct: 1   MTGLLYLGGKQEDDQEQ--RGREQQLFLYNSRNNEEIYSKGLEIWPQYGQQHQAVENYIS 60

Query: 61  FGVVGPTRKNLIINASDHEFVSRLGFSMMR-----GGGGGGVNCQDCGNQAKKDCSHLRC 120
           FG VGP+R NL+INASDHE      F+MMR     GGGGGG+NCQDCGNQAKKDCSHLRC
Sbjct: 61  FG-VGPSRMNLMINASDHE------FTMMRQGAATGGGGGGINCQDCGNQAKKDCSHLRC 120

Query: 121 RTC---------------W----------------------------------------- 180
           RTC               W                                         
Sbjct: 121 RTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRQQQFRPDQFDQTTHKCHRETQPSIPPAT 180

Query: 181 ----LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETS 234
               LE+AHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYDHGPETS
Sbjct: 181 VTSGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPETS 240

[Close]

BLAST of Lsi03G008150 vs. NCBI nr
Match: XP_023525481.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo] >XP_023525483.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86
Identity = 189/309 (61.17%), Postives = 205/309 (66.34%), Query Frame = 0


Query: 1   MKGLFYLSGKQEEDEEEIMRGREQQLFLYSKNNNEEIYSKGLEIWPQ-----QNVDNYIS 60
           M GL YL GKQE+D+E+  RGREQQLFLY+  NNEEIYSKGLEIWPQ     Q V+NYIS
Sbjct: 1   MTGLLYLGGKQEDDQEQ--RGREQQLFLYNSRNNEEIYSKGLEIWPQYGQQHQAVENYIS 60

Query: 61  FGVVGPTRKNLIINASDHEFVSRLGFSMMR-----GGGGGGVNCQDCGNQAKKDCSHLRC 120
           FG VGP+R NL+INASDH+      F+MMR     GGGGGG+NCQDCGNQAKKDC+HLRC
Sbjct: 61  FG-VGPSRMNLMINASDHD------FAMMRQGAATGGGGGGINCQDCGNQAKKDCTHLRC 120

Query: 121 RTC---------------W----------------------------------------- 180
           RTC               W                                         
Sbjct: 121 RTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRQQQQFRPDQFDQTTPKRHRETQPSIPPA 180

Query: 181 -----LEVAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPET 234
                LE+AHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYDHGPET
Sbjct: 181 AVTSGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPET 240

[Close]

BLAST of Lsi03G008150 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-34
Identity = 105/313 (33.55%), Postives = 142/313 (45.37%), Query Frame = 0


Query: 11  QEEDEEEIM---RGREQQLFLYSKNNNEEIYSKGLEIWPQQNVDNYISFGVVGPTRKNLI 70
           Q  +++EIM   +  +Q+L LYS        + GL + P     N+  F + G T     
Sbjct: 73  QNHNQQEIMFQHQQHQQRLDLYSS-------AAGLGVGP----SNHNQFDISGETSTAGA 132

Query: 71  INASDHEFVSRLGFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC-------------- 130
             A+    +   G     GGG GGV+CQDCGNQAKKDCSH+RCRTC              
Sbjct: 133 GRAAAMMMIRSGG----SGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRS 192

Query: 131 -W-----------------------------------------------------LEVAH 190
            W                                                     LEV +
Sbjct: 193 TWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN 252

Query: 191 FPAEFNSPAVFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGPETSGG------E 234
           FPAE +S AVFRCV+VS++++ EE+ AYQT+V+IGGH+FKGILYD GP +SGG       
Sbjct: 253 FPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVA 312

[Close]

BLAST of Lsi03G008150 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-31
Identity = 100/283 (35.34%), Postives = 131/283 (46.29%), Query Frame = 0


Query: 26  LFLYSKNNNEEIYSKGLEIWPQQNVDNYISFG--VVGPTRKNLIINASDHEFVSRLGFSM 85
           L L+   NN+EI  +  +   QQ +D Y S     VGP+ ++LI  +            M
Sbjct: 57  LELWQHPNNQEIIFQQQQ-QQQQRLDLYTSAAGLGVGPSNRSLIETSGG-------ALMM 116

Query: 86  MR-GGGGGGVNCQDCGNQAKKDCSHLRCRTC---------------W------------- 145
           MR G G GG +CQDCGNQ+KKDCSH+RCRTC               W             
Sbjct: 117 MRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQL 176

Query: 146 ----------------------------------------LEVAHFPAEFNSPAVFRCVK 205
                                                   LEV +FP E +S AVFRCV+
Sbjct: 177 STGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVR 236

Query: 206 VSAIDNVEEQLAYQTSVNIGGHMFKGILYDHGP---ETSGGESSYCHDGEDDGQALDLVI 234
           VS++D+ EE+ AY+T+V+IGGH+FKG+LYD GP    +SGG S   +       A     
Sbjct: 237 VSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 296

[Close]

BLAST of Lsi03G008150 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 128.6 bits (322), Expect = 6.4e-30
Identity = 115/354 (32.49%), Postives = 150/354 (42.37%), Query Frame = 0


Query: 1   MKGLFYLSG----KQEEDEEEIMRGREQQLFLYSKNNNEEIY--SKGLEIWP-------- 60
           M GLFYL G    KQ+  +E+     +   +LY     +EIY  +KG EI+P        
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYL--YKDEIYNNNKGFEIFPPQYFQQQQ 60

Query: 61  QQN----VDNYISFGVV---------GPTRKNLIIN-ASDHEFV--SRLGFSMMRGGGGG 120
           QQN      N  SFG+V           T ++L  N  SDHE V  S  GF++ R    G
Sbjct: 61  QQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---QG 120

Query: 121 GVNCQDCGNQAKKDCSHLRCRTC---------------W--------------------- 180
            +NCQDCGNQAKKDC H+RCRTC               W                     
Sbjct: 121 NMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRI 180

Query: 181 ------------------------------------------LEVAHFPAEFNSPAVFRC 233
                                                     LE +H P E +SPAVFRC
Sbjct: 181 RDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRC 240

[Close]

BLAST of Lsi03G008150 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 128.6 bits (322), Expect = 6.4e-30
Identity = 115/354 (32.49%), Postives = 150/354 (42.37%), Query Frame = 0


Query: 1   MKGLFYLSG----KQEEDEEEIMRGREQQLFLYSKNNNEEIY--SKGLEIWP-------- 60
           M GLFYL G    KQ+  +E+     +   +LY     +EIY  +KG EI+P        
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYL--YKDEIYNNNKGFEIFPPQYFQQQQ 60

Query: 61  QQN----VDNYISFGVV---------GPTRKNLIIN-ASDHEFV--SRLGFSMMRGGGGG 120
           QQN      N  SFG+V           T ++L  N  SDHE V  S  GF++ R    G
Sbjct: 61  QQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---QG 120

Query: 121 GVNCQDCGNQAKKDCSHLRCRTC---------------W--------------------- 180
            +NCQDCGNQAKKDC H+RCRTC               W                     
Sbjct: 121 NMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRI 180

Query: 181 ------------------------------------------LEVAHFPAEFNSPAVFRC 233
                                                     LE +H P E +SPAVFRC
Sbjct: 181 RDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRC 240

[Close]

BLAST of Lsi03G008150 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 112/368 (30.43%), Postives = 144/368 (39.13%), Query Frame = 0


Query: 1   MKGLFYLSGK------QEEDEEEIMRGREQQ-----LFLYSKNNNEEIY--SKGLEIWPQ 60
           M G FYL G+       ++D  ++ +    Q     L+LY     +EIY  +KG EIWP 
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLY----KDEIYNNNKGFEIWPP 60

Query: 61  QNVD------------------NYISFGVV--GPTRKN-------LIIN-ASDHEFVSRL 120
           Q                     N+ SFG+V  G +  N       L  N  SDHE     
Sbjct: 61  QYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHE---PG 120

Query: 121 GFSMMRGGGGGGVNCQDCGNQAKKDCSHLRCRTC---------------WLEVA------ 180
           GF++ R    GG+NCQDCGNQAKKDC H+RCRTC               W+  A      
Sbjct: 121 GFTVTR---QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERL 180

Query: 181 ------------------------------------------------------------ 234
                                                                       
Sbjct: 181 AQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEV 240

The following BLAST results are available for this feature:

BLAST of Lsi03G008150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4B6C9	6.0e-33	31.27	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9SD40	1.0e-32	33.55	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	8.1e-30	35.34	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9FXH7	8.9e-29	32.49	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]
Q9LQZ5	2.2e-27	30.43	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]

BLAST of Lsi03G008150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1X2	6.3e-102	67.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051450 PE=3 SV=1	[more]
A0A5A7SQY1	7.0e-101	67.40	Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C0M5	7.0e-101	67.40	protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103495466 PE=3 SV=1	[more]
A0A6J1J314	1.2e-87	62.01	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480884 ...	[more]
A0A6J1FN62	9.8e-87	61.17	protein SHI RELATED SEQUENCE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Lsi03G008150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137039.1	1.3e-101	67.51	protein EXPRESSION OF TERPENOIDS 1 [Cucumis sativus] >KGN43665.1 hypothetical pr...	[more]
XP_038886896.1	1.7e-101	66.67	protein EXPRESSION OF TERPENOIDS 1-like [Benincasa hispida]	[more]
XP_008455259.1	1.4e-100	67.40	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0031525.1 protein S...	[more]
XP_022981873.1	2.4e-87	62.01	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022981874.1 protein S...	[more]
XP_023525481.1	1.5e-86	61.17	protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo] >XP_023525483.1...	[more]

BLAST of Lsi03G008150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	7.3e-34	33.55	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	5.7e-31	35.34	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	6.4e-30	32.49	SHI-related sequence 7	[more]
AT1G19790.2	6.4e-30	32.49	SHI-related sequence 7	[more]
AT1G75520.1	1.6e-28	30.43	SHI-related sequence 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 118..168 e-value: 9.3E-22 score: 78.2 coord: 91..113 e-value: 2.8E-8 score: 34.4
None	No IPR available	PANTHER	PTHR31604:SF2	PROTEIN SHI RELATED SEQUENCE 7	coord: 115..230 coord: 1..113
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 119..167 e-value: 3.5E-25 score: 85.7
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 115..230 coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G008150.1	Lsi03G008150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding