Lsi03G005540 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G005540
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B-like cyclin
Location	chr03: 6711122 .. 6714750 (-)
RNA-Seq Expression	Lsi03G005540
Synteny	Lsi03G005540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCTTCTCTATTTCACCACCAACTCCATTCTTCCACCAATGGATTCTCCGAGATTCTCCTCCCCCTCCTCCGCTTGTCTTCTCCGGCAAACTCGGCAACTTCCACATTCTCTCTCCGCCGTTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGGTATGGATTTCGACTTCTTTGTCTTGATTTTTTTTTAGATATCGGTTTGGCTAGTTCCCTGTGCTCGAGATATTGCGTGCAGTGAGGTTGTTAAATGAACTGAGGATTGCGATACCTTTACTCTCTCTTGGTTTTAGGTATTGGTTTGGCAAGTTCTCTGTGGTTGAGAGATATTGTGTGTAGTGAGTGCTTATATGAACTGAACATTACGATGTCTTTTCTTTGGTTTGATTTTAGATATCGGTTTAGCGAGGTCTCTGAGATCGAGATCTTGTGTGTAGTGAAGTGGTCATATGAACTGACGATTGCGATACCTTTTCTTCGTGCAGTTTAATAGTTTCATCGTCATCTTGTTCATTTACGATTATACTAATTATAGAGAATTCGAGGTTCCTTGCTACTGATATTTGTTTAATTTTTCTACAATTGTTGTTTCTGCGATTTGTCTTGGAGGAATTTATTATAGCGCAGGGGAGGTTCTATCTGGAATATATTGTTTGGATATGGATTAATGTCTCGATAACACAATTTTCTCGGTCAATTTATTTCTTCGGATTGGAATATTTTACTAAAATGCATTTATACTCACAAATATATGTACAAGTAAAGTTTGCAAGTTCGAATTCCTGCCTGCTAGTTTCCTCATCTTTCAACACGTTCAAGCAAACCAATGCCAATCTCATTCCCATGATTTTATGAAAATAATAATCTTCAAGTTTAATAGTTCAACTTCAACATATTTGATCCAACTAGTTATTTCCTTGCGTGAACCAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGTATTTACTAAGAACCCACTTGTTTTATTTGGTAATATTTATGGTTTTAGTTACAAAATCTCATTGCTATATTATTGATTGGTGCTGCAGGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTGCTCAATTAGTCCTTTCCATGCTTAAGCATTGCTTTCTCTTCTAATATTTTGACGCTATAAACATGTTGCATTCTCGTCTTCCCTGACATGTTTACAGCAGAAGGAAGAAAATCTCCATATGGTTTATGAGTTATAAATATCATTGCTAGTATTTATGTCCCTTTTTTATTTTGTTATTCATAATTGTTTTTCAAAACATAGTTATTGACATCAATATCTTGTCTTATCAACATTTTTAGAAAATTGAGACATCAACTTTAATCCTTTTGCATACCCCTTTTTAGTTAATGAAACTTAGCTGTTAATTTTGGTTCATATGCGAAAAGATACTAATTCCATGGCAACTGATTAAGGATTTTATCTGGTTTTGTTTAATATGCAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGTAAGAATGCTTTTCAACTATCGTGCATTGAGTTCCTACAAACCGATATTTCCCATTTTCACAATAAGGGATTAACTCATTGTTGCCACCTTACAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGTAAGCCCCATTCTCGACATTTTCCCATTTTTATTCTTCCTCTCATTATTGATTCTAAAAACTTACCTCTATCATCAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGGTAAGTGATATGTTTGCAACTCTTTTAGTAACCAATTTATGACATAGTTTGATAATGTTCTTGTTAACTTCATTAAAATATTATTGGTGTTTTAAGCGATAACAAATTTTGTTGCTTCACCACATTTTGCAGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGGTACCGTGCGTACATATTTCATTAGTTATTTTGCTCAAACTTTTGAATTGTGACCTATATACTAAAAAATATTGAAAAGAATAAACTAACTTTATCAAGTAAAACTCTTAATTTTATTGGCAATTTGATATAGGTATTGATATTGAATCCAAAACTATTTCTAGTTTACATAAATTTACCTTTGCCTAATTAGCTTAAGCTTTTGAGCCAATTGATGATTTAATCTGATATTAGAGCAAGAGGTCCCGTGCTTAGATCCTTGTTATTTCCTCTCCAATTAATATTAATTTTCACTTGTCGAGTATTCTACAATTTCCAAATCTACAAGTGAGGAGTGTAGTGTTGATATAATATTAGACTTACATTCACTATCATGTTAAGCTTTTTGGTTAACCGTTGATTTAACATAAATGAAACAAAAACTGAAGCAAATGAAGAATGTTAAGGGCGAGCATGTATGAAGGGTTAAATACACTTTACAGAAGTTTTCGTTTTCAATAGTGAACTCTAATCATATTTAATGATAAGCATTTTCATTTTTTCAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAAACTCTTTCTCTTCTCTTGGCTAGCATGACATGCACAGTAACCATGCACAAATAATGAGTACTAGGTACTTGATAGATAGATCATAGAAGAAAATTTTTTTCGTCTATCTCTCTTCATTGTAGCTTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATTATGAGGGCTTTACTCCCCCTTTCTCTTAGTTCCCATCCAAGAATTGTATAGATCATACATTTGTTTTCAAGGTGAAATTTCTACTAC

mRNA sequence

AGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCTTCTCTATTTCACCACCAACTCCATTCTTCCACCAATGGATTCTCCGAGATTCTCCTCCCCCTCCTCCGCTTGTCTTCTCCGGCAAACTCGGCAACTTCCACATTCTCTCTCCGCCGTTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAAACTCTTTCTCTTCTCTTGGCTAGCATGACATGCACAGTAACCATGCACAAATAATGAGTACTAGGTACTTGATAGATAGATCATAGAAGAAAATTTTTTTCGTCTATCTCTCTTCATTGTAGCTTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATTATGAGGGCTTTACTCCCCCTTTCTCTTAGTTCCCATCCAAGAATTGTATAGATCATACATTTGTTTTCAAGGTGAAATTTCTACTAC

Coding sequence (CDS)

ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAA

Protein sequence

MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFLRTA

Homology

[Close]

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot
Match: Q75I54 (Cyclin-A3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-81
Identity = 164/294 (55.78%), Postives = 211/294 (71.77%), Query Frame = 0


Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           +D +E  EG    C+     A  I ++LRS+E++   +   + IE        +T   +R
Sbjct: 87  VDDDEEGEGDPQLCAP---YASDINSYLRSMEVQAKRRPAADYIETV---QVDVT-ANMR 146

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
            ILVDWLVEVAEEYKLVSDTLYLT+S+IDR+LS  +I+R KLQLLGV  MLIASK+EEIS
Sbjct: 147 GILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEIS 206

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDL 240
           PP+ EDFCYITDNTY K++V+ MER++   L  E G PT K FLR+F + + E+ K P L
Sbjct: 207 PPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSL 266

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
             E +  YLAELSLL++ CV++LPS VAAS +F++R T+  + +PW   LQ  +GYR SE
Sbjct: 267 PLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASE 326

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
           LK+CI  IHDLQLNRKGSSL+AIRDKYKQH+FK V+ L  P EIPA YFED+++
Sbjct: 327 LKDCITCIHDLQLNRKGSSLMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373

[Close]

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot
Match: Q2QN26 (Cyclin-A3-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.8e-80
Identity = 152/274 (55.47%), Postives = 200/274 (72.99%), Query Frame = 0


Query: 81  AFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYKLVSDT 140
           A  IY +LRS+E+E   +   + IE A+  D +     +R ILVDWLVEVA+EYKLV+DT
Sbjct: 116 ASDIYTYLRSMEVEARRQSAADYIE-AVQVDVT---ANMRAILVDWLVEVADEYKLVADT 175

Query: 141 LYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTYTKEQV 200
           LYL +S++DRYLS H + R++LQLLGV  MLIA+K+EEISPPH EDFCYITDNTYT+++V
Sbjct: 176 LYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEV 235

Query: 201 LNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLLDHRCV 260
           + ME ++   L  E G PT+K FLR FT+   E+ K   L  E +  YLAELSLLD+ C+
Sbjct: 236 VKMESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCL 295

Query: 261 QILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSL 320
           + LPS VAAS +F+++  I P  +PW   +Q+ +GY+ SELK+CILAIHDLQL +K S+L
Sbjct: 296 RFLPSVVAASVVFVAKLNIDPYTNPWSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNL 355

Query: 321 LAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
            AIRDKYKQHKFKCV+ L  P +IPA Y +D+ +
Sbjct: 356 TAIRDKYKQHKFKCVSTLLPPVDIPASYLQDLTE 385

[Close]

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot
Match: Q3ECW2 (Cyclin-A3-4 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-4 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.0e-79
Identity = 170/355 (47.89%), Postives = 237/355 (66.76%), Query Frame = 0


Query: 14  SKKRDSEVHSLQQATANKRPALGEITN------------SLIFSSSQCSFSDQEMTDKDL 73
           +K++ S +   +   + KR  LGE+ N              + + +  + S ++M  K L
Sbjct: 15  AKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQM-KKAL 74

Query: 74  DMEE---LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTR 133
            + E   L E RSVD       A  I  +LR +E +   + LP+ IEK     S LT   
Sbjct: 75  MIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKV---QSDLT-PH 134

Query: 134 VREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIAS-KHE 193
           +R +LVDWLVEVAEEYKLVSDTLYLTIS++DR+LS   I+R KLQL+GV  MLIAS K+E
Sbjct: 135 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYE 194

Query: 194 EISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKA 253
           EI PP  EDFCYITDNT+TK++V++ME ++   L  E G+PT+K FLR FT+VA E++K 
Sbjct: 195 EIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKD 254

Query: 254 PDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYR 313
             LQ E L CYL+ELS+LD+ CV+ LPS ++ASA+FL+RF I+P++HPW   L+ Y+ Y+
Sbjct: 255 SQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYK 314

Query: 314 PSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
            ++L+ C+  IHDL L+R+G++L A+R+KYKQHK+KCVA +    E+P  +FEDI
Sbjct: 315 AADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 364

[Close]

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot
Match: Q9C6A9 (Cyclin-A3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-76
Identity = 144/293 (49.15%), Postives = 205/293 (69.97%), Query Frame = 0


Query: 60  DLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRV 119
           DL+ +   + RS D          IY +LR LE++   + LP+ IEK            +
Sbjct: 82  DLESKSDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKD----VTPSM 141

Query: 120 REILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEI 179
           R +LVDWLVEVAEEYKL S+TLYLT+SHIDR+LS   +++ KLQL+GV  MLIASK+EEI
Sbjct: 142 RGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEI 201

Query: 180 SPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPD 239
           SPP  +DFCYITDNT++K+ V+ ME ++   L  E G PT+  F+R FT+VA +++K P 
Sbjct: 202 SPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPH 261

Query: 240 LQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPS 299
           LQ E L CYL+ELS+LD++ V+ +PS +AASA+FL+RF I+P++HPW   L+ Y+ Y+ +
Sbjct: 262 LQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAA 321

Query: 300 ELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           +L+ C+  IHDL L+R+G +L A+R+KYK HKF+CVA +    E+P  ++ED+
Sbjct: 322 DLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWEDV 370

[Close]

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot
Match: Q9FMH5 (Putative cyclin-A3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.1e-76
Identity = 160/345 (46.38%), Postives = 224/345 (64.93%), Query Frame = 0


Query: 13  TSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEEL----PE 72
           T +K   E    ++    KR  LGE+ N      S+ + + Q+     +   E      +
Sbjct: 16  TKRKASMEAAIDKERINKKRVVLGELPNLSNIKKSRKATTKQKKKSVSIPTIETLNSDID 75

Query: 73  GRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLV 132
            RS D         SI+ +LR LE++   + L + IEK     +S     +R +LVDWLV
Sbjct: 76  TRSDDPQMCGPYVTSIFEYLRQLEVK--SRPLVDYIEKIQKDVTS----NMRGVLVDWLV 135

Query: 133 EVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFC 192
           EVAEEYKL+SDTLYL +S+IDR+LS   +++ +LQLLGV  MLIASK+EEI+PP+ +DFC
Sbjct: 136 EVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFC 195

Query: 193 YITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCY 252
           YITDNTYTK++++ ME ++   L  E G PT   FLR FT+VA E+++   LQ E L  Y
Sbjct: 196 YITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSY 255

Query: 253 LAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAI 312
           L+ELS+LD++ V+ LPS VAASA+FL+RF I+P++HPW + L+ Y+ Y+  +LKEC+  I
Sbjct: 256 LSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMI 315

Query: 313 HDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDID 353
           HDL L+RK  +L AIR+KYKQHKFKCVA +    E+P   FED++
Sbjct: 316 HDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFEDVN 354

[Close]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL
Match: A0A0A0K7S8 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G071600 PE=3 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.6e-181
Identity = 319/362 (88.12%), Postives = 332/362 (91.71%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 82  MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 141

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 142 LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 201

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 202 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 261

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWKAPDLQ
Sbjct: 262 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQ 321

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SEL
Sbjct: 322 FELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASEL 381

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRFL
Sbjct: 382 KECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFL 441

Query: 361 RT 363
           RT
Sbjct: 442 RT 443

[Close]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL
Match: A0A1S3C003 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103495289 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.9e-175
Identity = 308/351 (87.75%), Postives = 324/351 (92.31%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLRIFTKV+LENWKAPD++
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRIFTKVSLENWKAPDVE 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPSEL
Sbjct: 241 FELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           KECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 KECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 351

[Close]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL
Match: A0A1S3BZG3 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103495289 PE=3 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 9.6e-174
Identity = 308/352 (87.50%), Postives = 324/352 (92.05%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWK-APDL 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLRIFTKV+LENWK APD+
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRIFTKVSLENWKQAPDV 240

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
           +FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPSE
Sbjct: 241 EFELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSE 300

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           LKECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 LKECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 352

[Close]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL
Match: A0A6J1JE46 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111486057 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170
Identity = 306/362 (84.53%), Postives = 329/362 (90.88%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY KPSVRTSKKRD E  SLQ A+ANKR ALGEITNSLIF++SQCS SDQEMTDKD
Sbjct: 1   MDASEYLKPSVRTSKKRDLEDQSLQLASANKRVALGEITNSLIFNTSQCSLSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           +D EE P+G SVDCS+K  SA SIYNHLRSLEMELHMK+LPNNIEKA NGDS L+FT +R
Sbjct: 61  MDEEERPDGTSVDCSKKCRSASSIYNHLRSLEMELHMKVLPNNIEKAQNGDSILSFTYMR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+D YLS  A+D+SKLQLLGVCCML+ASK+EEI+
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDIYLSSQAVDKSKLQLLGVCCMLLASKYEEIN 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PP+ EDFCYITDNTYTKEQVL+MEREVR FL+CEGAPT+K FLRIFT+V+LENWKAPDLQ
Sbjct: 181 PPNVEDFCYITDNTYTKEQVLSMEREVRKFLSCEGAPTIKNFLRIFTQVSLENWKAPDLQ 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE LSCYLAELSLLDHR VQ LPS VAASAIFLSRFTIQP+KHPWCLALQ YSGYRPSEL
Sbjct: 241 FEFLSCYLAELSLLDHRFVQFLPSMVAASAIFLSRFTIQPDKHPWCLALQHYSGYRPSEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIH LQLNRKGSSL AIR KYKQHKFKCVAELSSPSEIPAYYFEDID+Q FNRFL
Sbjct: 301 KECILAIHRLQLNRKGSSLQAIRTKYKQHKFKCVAELSSPSEIPAYYFEDIDKQSFNRFL 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL
Match: A0A5A7SPV7 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001030 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.5e-166
Identity = 299/353 (84.70%), Postives = 317/353 (89.80%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLR--IFTKVALENWKAPD 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLR   F+ +    + APD
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRQECFSTIM---YSAPD 240

Query: 241 LQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPS 300
           ++FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPS
Sbjct: 241 VEFELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPS 300

Query: 301 ELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           ELKECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 ELKECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 350

[Close]

BLAST of Lsi03G005540 vs. NCBI nr
Match: XP_038888570.1 (cyclin-A3-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 673.3 bits (1736), Expect = 1.2e-189
Identity = 333/362 (91.99%), Postives = 345/362 (95.30%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPSVR SKKR+SE HSLQQATANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSAEYHKPSVRASKKRESEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPEG SVDCSEKSGSAFSIY+HLRSLEMELHMKLLPNNIEKA N DSSLTFTR+R
Sbjct: 61  LDKEELPEGMSVDCSEKSGSAFSIYSHLRSLEMELHMKLLPNNIEKAHNSDSSLTFTRMR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYT+EQVLNMEREVRTFLTCEGAPT+KVFLRIFTKVALENWKAPDL+
Sbjct: 181 PPHVEDFCYITDNTYTREQVLNMEREVRTFLTCEGAPTIKVFLRIFTKVALENWKAPDLE 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+LSCYLAELSLLD+ C+Q LPSKVAASAIFLSRFTIQPEKHPWC  LQ YSG+RPSEL
Sbjct: 241 FELLSCYLAELSLLDYLCMQFLPSKVAASAIFLSRFTIQPEKHPWCSVLQHYSGFRPSEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVA+LSSPSEIPA YFEDIDQQ F+RFL
Sbjct: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAKLSSPSEIPACYFEDIDQQSFSRFL 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Lsi03G005540 vs. NCBI nr
Match: XP_038888569.1 (putative cyclin-A3-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 668.7 bits (1724), Expect = 2.9e-188
Identity = 333/363 (91.74%), Postives = 345/363 (95.04%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPSVR SKKR+SE HSLQQATANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSAEYHKPSVRASKKRESEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPEG SVDCSEKSGSAFSIY+HLRSLEMELHMKLLPNNIEKA N DSSLTFTR+R
Sbjct: 61  LDKEELPEGMSVDCSEKSGSAFSIYSHLRSLEMELHMKLLPNNIEKAHNSDSSLTFTRMR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWK-APDL 240
           PPH EDFCYITDNTYT+EQVLNMEREVRTFLTCEGAPT+KVFLRIFTKVALENWK APDL
Sbjct: 181 PPHVEDFCYITDNTYTREQVLNMEREVRTFLTCEGAPTIKVFLRIFTKVALENWKQAPDL 240

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
           +FE+LSCYLAELSLLD+ C+Q LPSKVAASAIFLSRFTIQPEKHPWC  LQ YSG+RPSE
Sbjct: 241 EFELLSCYLAELSLLDYLCMQFLPSKVAASAIFLSRFTIQPEKHPWCSVLQHYSGFRPSE 300

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRF 360
           LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVA+LSSPSEIPA YFEDIDQQ F+RF
Sbjct: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAKLSSPSEIPACYFEDIDQQSFSRF 360

Query: 361 LRT 363
           LRT
Sbjct: 361 LRT 363

[Close]

BLAST of Lsi03G005540 vs. NCBI nr
Match: XP_004137091.2 (putative cyclin-A3-1 isoform X2 [Cucumis sativus] >KGN43871.1 hypothetical protein Csa_017106 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 7.5e-181
Identity = 319/362 (88.12%), Postives = 332/362 (91.71%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 82  MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 141

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 142 LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 201

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 202 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 261

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWKAPDLQ
Sbjct: 262 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQ 321

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SEL
Sbjct: 322 FELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASEL 381

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRFL
Sbjct: 382 KECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFL 441

Query: 361 RT 363
           RT
Sbjct: 442 RT 443

[Close]

BLAST of Lsi03G005540 vs. NCBI nr
Match: XP_011658884.2 (putative cyclin-A3-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 1.9e-179
Identity = 319/363 (87.88%), Postives = 332/363 (91.46%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 82  MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 141

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 142 LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 201

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 202 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 261

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWK-APDL 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWK APDL
Sbjct: 262 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKQAPDL 321

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
           QFE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SE
Sbjct: 322 QFELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASE 381

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRF 360
           LKECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRF
Sbjct: 382 LKECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRF 441

Query: 361 LRT 363
           LRT
Sbjct: 442 LRT 444

[Close]

BLAST of Lsi03G005540 vs. NCBI nr
Match: XP_008455012.1 (PREDICTED: cyclin-A3-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 624.0 bits (1608), Expect = 8.1e-175
Identity = 308/351 (87.75%), Postives = 324/351 (92.31%), Query Frame = 0


Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLRIFTKV+LENWKAPD++
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRIFTKVSLENWKAPDVE 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPSEL
Sbjct: 241 FELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           KECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 KECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 351

[Close]

BLAST of Lsi03G005540 vs. TAIR 10
Match: AT1G47230.1 (CYCLIN A3;4 )

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-81
Identity = 170/354 (48.02%), Postives = 237/354 (66.95%), Query Frame = 0


Query: 14  SKKRDSEVHSLQQATANKRPALGEITN------------SLIFSSSQCSFSDQEMTDKDL 73
           +K++ S +   +   + KR  LGE+ N              + + +  + S ++M  K L
Sbjct: 15  AKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQM-KKAL 74

Query: 74  DMEE---LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTR 133
            + E   L E RSVD       A  I  +LR +E +   + LP+ IEK     S LT   
Sbjct: 75  MIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKV---QSDLT-PH 134

Query: 134 VREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEE 193
           +R +LVDWLVEVAEEYKLVSDTLYLTIS++DR+LS   I+R KLQL+GV  MLIASK+EE
Sbjct: 135 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEE 194

Query: 194 ISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAP 253
           I PP  EDFCYITDNT+TK++V++ME ++   L  E G+PT+K FLR FT+VA E++K  
Sbjct: 195 IGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDS 254

Query: 254 DLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRP 313
            LQ E L CYL+ELS+LD+ CV+ LPS ++ASA+FL+RF I+P++HPW   L+ Y+ Y+ 
Sbjct: 255 QLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKA 314

Query: 314 SELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           ++L+ C+  IHDL L+R+G++L A+R+KYKQHK+KCVA +    E+P  +FEDI
Sbjct: 315 ADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 363

[Close]

BLAST of Lsi03G005540 vs. TAIR 10
Match: AT1G47230.2 (CYCLIN A3;4 )

HSP 1 Score: 296.2 bits (757), Expect = 3.6e-80
Identity = 170/355 (47.89%), Postives = 237/355 (66.76%), Query Frame = 0


Query: 14  SKKRDSEVHSLQQATANKRPALGEITN------------SLIFSSSQCSFSDQEMTDKDL 73
           +K++ S +   +   + KR  LGE+ N              + + +  + S ++M  K L
Sbjct: 15  AKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQM-KKAL 74

Query: 74  DMEE---LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTR 133
            + E   L E RSVD       A  I  +LR +E +   + LP+ IEK     S LT   
Sbjct: 75  MIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKV---QSDLT-PH 134

Query: 134 VREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIAS-KHE 193
           +R +LVDWLVEVAEEYKLVSDTLYLTIS++DR+LS   I+R KLQL+GV  MLIAS K+E
Sbjct: 135 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYE 194

Query: 194 EISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKA 253
           EI PP  EDFCYITDNT+TK++V++ME ++   L  E G+PT+K FLR FT+VA E++K 
Sbjct: 195 EIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKD 254

Query: 254 PDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYR 313
             LQ E L CYL+ELS+LD+ CV+ LPS ++ASA+FL+RF I+P++HPW   L+ Y+ Y+
Sbjct: 255 SQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYK 314

Query: 314 PSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
            ++L+ C+  IHDL L+R+G++L A+R+KYKQHK+KCVA +    E+P  +FEDI
Sbjct: 315 AADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 364

[Close]

BLAST of Lsi03G005540 vs. TAIR 10
Match: AT1G47210.2 (cyclin-dependent protein kinase 3;2 )

HSP 1 Score: 288.1 bits (736), Expect = 9.8e-78
Identity = 144/293 (49.15%), Postives = 205/293 (69.97%), Query Frame = 0


Query: 60  DLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRV 119
           DL+ +   + RS D          IY +LR LE++   + LP+ IEK            +
Sbjct: 82  DLESKSDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKD----VTPSM 141

Query: 120 REILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEI 179
           R +LVDWLVEVAEEYKL S+TLYLT+SHIDR+LS   +++ KLQL+GV  MLIASK+EEI
Sbjct: 142 RGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEI 201

Query: 180 SPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPD 239
           SPP  +DFCYITDNT++K+ V+ ME ++   L  E G PT+  F+R FT+VA +++K P 
Sbjct: 202 SPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPH 261

Query: 240 LQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPS 299
           LQ E L CYL+ELS+LD++ V+ +PS +AASA+FL+RF I+P++HPW   L+ Y+ Y+ +
Sbjct: 262 LQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAA 321

Query: 300 ELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           +L+ C+  IHDL L+R+G +L A+R+KYK HKF+CVA +    E+P  ++ED+
Sbjct: 322 DLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWEDV 370

[Close]

BLAST of Lsi03G005540 vs. TAIR 10
Match: AT5G43080.1 (Cyclin A3;1 )

HSP 1 Score: 287.0 bits (733), Expect = 2.2e-77
Identity = 160/345 (46.38%), Postives = 224/345 (64.93%), Query Frame = 0


Query: 13  TSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEEL----PE 72
           T +K   E    ++    KR  LGE+ N      S+ + + Q+     +   E      +
Sbjct: 16  TKRKASMEAAIDKERINKKRVVLGELPNLSNIKKSRKATTKQKKKSVSIPTIETLNSDID 75

Query: 73  GRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLV 132
            RS D         SI+ +LR LE++   + L + IEK     +S     +R +LVDWLV
Sbjct: 76  TRSDDPQMCGPYVTSIFEYLRQLEVK--SRPLVDYIEKIQKDVTS----NMRGVLVDWLV 135

Query: 133 EVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFC 192
           EVAEEYKL+SDTLYL +S+IDR+LS   +++ +LQLLGV  MLIASK+EEI+PP+ +DFC
Sbjct: 136 EVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFC 195

Query: 193 YITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCY 252
           YITDNTYTK++++ ME ++   L  E G PT   FLR FT+VA E+++   LQ E L  Y
Sbjct: 196 YITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSY 255

Query: 253 LAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAI 312
           L+ELS+LD++ V+ LPS VAASA+FL+RF I+P++HPW + L+ Y+ Y+  +LKEC+  I
Sbjct: 256 LSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMI 315

Query: 313 HDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDID 353
           HDL L+RK  +L AIR+KYKQHKFKCVA +    E+P   FED++
Sbjct: 316 HDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFEDVN 354

[Close]

BLAST of Lsi03G005540 vs. TAIR 10
Match: AT1G47220.1 (Cyclin A3;3 )

HSP 1 Score: 255.4 bits (651), Expect = 7.0e-68
Identity = 145/337 (43.03%), Postives = 208/337 (61.72%), Query Frame = 0


Query: 16  KRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEGRSVDCS 75
           K+D ++HS             EI + L+      +F +   +  D+D       RS D  
Sbjct: 4   KKDKQIHSDHNPQDASPVEWAEIRHKLL------AFQENIQSGSDID------ARSDDPQ 63

Query: 76  EKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYK 135
                   IY +LR LE++  ++ L + IEK       +T ++ R +LVDWLVEVAEE++
Sbjct: 64  MCGLYVSDIYEYLRELEVKPKLRPLHDYIEKI---QEDITPSK-RGVLVDWLVEVAEEFE 123

Query: 136 LVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTY 195
           LVS+TLYLT+S+IDR+LS   ++   LQL+GV  M IASK+EE   P  EDFCYIT NTY
Sbjct: 124 LVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTY 183

Query: 196 TKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLL 255
           TK+ VL ME ++   L  E G PT   FLR F +VA E++K P+LQ E L CYL+ELS+L
Sbjct: 184 TKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSML 243

Query: 256 DHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNR 315
           D+ CV+ +PS +AASA+FL+RF I P +HPW   L+  + Y+ ++L+ C+  + DL L+R
Sbjct: 244 DYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIMLDLYLSR 303

Query: 316 KGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
              +  A+R+KYKQHKF+ VA +    E+P  ++ED+
Sbjct: 304 SEGASKAVREKYKQHKFQYVAAIPVYQELPVTFWEDV 324

The following BLAST results are available for this feature:

BLAST of Lsi03G005540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75I54	1.4e-81	55.78	Cyclin-A3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-1 PE=3 SV=1	[more]
Q2QN26	7.8e-80	55.47	Cyclin-A3-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-2 PE=2 SV=1	[more]
Q3ECW2	5.0e-79	47.89	Cyclin-A3-4 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-4 PE=1 SV=1	[more]
Q9C6A9	1.4e-76	49.15	Cyclin-A3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-2 PE=2 SV=1	[more]
Q9FMH5	3.1e-76	46.38	Putative cyclin-A3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-1 PE=3 SV=1	[more]

BLAST of Lsi03G005540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7S8	3.6e-181	88.12	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G071600 PE=3 SV=1	[more]
A0A1S3C003	3.9e-175	87.75	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103495289 PE=3 SV=1	[more]
A0A1S3BZG3	9.6e-174	87.50	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103495289 PE=3 SV=1	[more]
A0A6J1JE46	1.3e-170	84.53	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111486057 PE=3 SV=1	[more]
A0A5A7SPV7	1.5e-166	84.70	B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001030...	[more]

BLAST of Lsi03G005540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888570.1	1.2e-189	91.99	cyclin-A3-1-like isoform X2 [Benincasa hispida]	[more]
XP_038888569.1	2.9e-188	91.74	putative cyclin-A3-1 isoform X1 [Benincasa hispida]	[more]
XP_004137091.2	7.5e-181	88.12	putative cyclin-A3-1 isoform X2 [Cucumis sativus] >KGN43871.1 hypothetical prote...	[more]
XP_011658884.2	1.9e-179	87.88	putative cyclin-A3-1 isoform X1 [Cucumis sativus]	[more]
XP_008455012.1	8.1e-175	87.75	PREDICTED: cyclin-A3-1-like isoform X2 [Cucumis melo]	[more]

BLAST of Lsi03G005540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47230.1	1.5e-81	48.02	CYCLIN A3;4	[more]
AT1G47230.2	3.6e-80	47.89	CYCLIN A3;4	[more]
AT1G47210.2	9.8e-78	49.15	cyclin-dependent protein kinase 3;2	[more]
AT5G43080.1	2.2e-77	46.38	Cyclin A3;1	[more]
AT1G47220.1	7.0e-68	43.03	Cyclin A3;3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 217..340 e-value: 1.9E-37 score: 140.4
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 217..339 e-value: 3.0E-30 score: 104.8
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 221..309 e-value: 2.8E-14 score: 63.5 coord: 125..209 e-value: 8.9E-19 score: 78.4
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 217..308 e-value: 4.5334E-10 score: 53.7817
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 120..207 e-value: 5.13101E-18 score: 76.1232
IPR039361	Cyclin	PIRSF	PIRSF001771	Cyclin_A_B_D_E	coord: 3..347 e-value: 1.1E-86 score: 289.7
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 20..350
None	No IPR available	GENE3D	1.10.472.10		coord: 97..215 e-value: 6.6E-79 score: 266.4
None	No IPR available	GENE3D	1.10.472.10		coord: 84..336 e-value: 6.6E-79 score: 266.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10177:SF478	CYCLIN-A3-1-LIKE	coord: 20..350
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 101..211 e-value: 1.6E-32 score: 111.9
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 288..363 score: 13.807961
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 217..341
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 85..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G005540.1	Lsi03G005540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding