Lsi03G005430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G005430
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPlant basic secretory protein (BSP) family protein
Locationchr03: 6520437 .. 6521591 (+)
RNA-Seq ExpressionLsi03G005430
SyntenyLsi03G005430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACTGGCGTTCACTACCAACAACGAGATTCATGTCAGCGCAAACTATATTTCAAGCTATAATGGGGATTTGAAAAGGGAGATCACAGGTGCTTGCTACTATCCCCAAAGCTTAAAATTTATATTAGTTTCATTTTTTGTGTTTTAAGATCAAATGACAAATTTTAAAAACTAGAAAATATAATTTTTAAAAACTTGTTTTTATTTTTTAAAAATTAAGAATTCGAATGGTTAAAGGAAAATATGAAAATCATGCCTTTTCCAAGTAAAAAAATTTAAAAACAAAAAATTAAAACCAAATGATTACCAAATGGATTTATGTTTTTTAGTTTAAAAAACTTTGTTTAAATTTTGAAAACACTCTGCAAATAGGACAACAACAAAACAAGAAACCAATATGTGATTTAATATTTATAAACATACATTCTTGAAATTCAGAAACAAAAAATCTGTTAGGATAGAAACGAAATCCATAAGTAAAAAAAAAAACAAACAAAAAAATGGCATAGAAATTTATGTGGTTCACTAACAATCAATTTACGTCTAAAGGCATGTAGAAAAAGTAGATTATTATTGAAAAGAAATATAAAATAATACAAATAGTAGTGGTATCAATAGAGTTAGTATGTTTATATATGACACTTTTCTAAGCTCCATGTCCAAAAACAAAATAAATATAAACGAAATTTAACCAAATTTTAGTTAGAATGATATCATTTAATTCTAATCTTTTATTCTTATTCTTAATTATAGGGGTGTTGTACCACGAAATAACCCATATATGGCAGTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA

mRNA sequence

ATGGAGGGTGTTTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA

Coding sequence (CDS)

ATGGAGGGTGTTTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA

Protein sequence

MEGVWSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGLVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL
Homology
BLAST of Lsi03G005430 vs. ExPASy Swiss-Prot
Match: C0HJG8 (Basic secretory protease (Fragments) OS=Boswellia serrata OX=613112 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0

Query: 43 WDEGYDVTARFLDYLEGVKSGLVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYK 98
          WDEGYDVTARFLDYL  + +G VA+L                  K V+QLW+EYK
Sbjct: 18 WDEGYDVTARFLDYLNSLDAGFVAELE----------------NKTVEQLWSEYK 56

BLAST of Lsi03G005430 vs. ExPASy TrEMBL
Match: A0A0A0K322 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072800 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 92/115 (80.00%), Postives = 102/115 (88.70%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLE-GVKSG 64
           W+GNL AP GLIEGIADYVRLKSGYIPG W EPG G  WDEGYDVTARFLDYLE  V+SG
Sbjct: 130 WNGNLKAPSGLIEGIADYVRLKSGYIPGTWVEPGGGNWWDEGYDVTARFLDYLERSVRSG 189

Query: 65  LVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNG 119
           LVA+LNR++RNGYS DYFRQL+GKPVD+LWAEYKTKAK+ N+D KCNSF IEV+G
Sbjct: 190 LVAELNRKMRNGYSDDYFRQLMGKPVDELWAEYKTKAKFGNVDNKCNSFEIEVSG 244

BLAST of Lsi03G005430 vs. ExPASy TrEMBL
Match: A0A5D3C5V2 (NtPRp27-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00870 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           WSGN+ AP GLIEGIADYVRLKSGYI   W EPG G RWDEGYDVTARFLDYLE V+SGL
Sbjct: 129 WSGNMKAPSGLIEGIADYVRLKSGYISETWVEPGGGNRWDEGYDVTARFLDYLERVRSGL 188

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL 124
           VA+LNR++RN YS DYFRQLLGKPVD+LW EYKTK K   +D KC +F IE +GVFALQL
Sbjct: 189 VAELNRKMRNEYSDDYFRQLLGKPVDELWTEYKTKGKLGILDDKCKAFEIEASGVFALQL 248

BLAST of Lsi03G005430 vs. ExPASy TrEMBL
Match: A0A1S3BZT8 (uncharacterized protein LOC103495268 OS=Cucumis melo OX=3656 GN=LOC103495268 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           WSGN+ AP GLIEGIADYVRLKSGYI   W EPG G RWDEGYDVTARFLDYLE V+SGL
Sbjct: 137 WSGNMKAPSGLIEGIADYVRLKSGYISETWVEPGGGNRWDEGYDVTARFLDYLERVRSGL 196

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL 124
           VA+LNR++RN YS DYFRQLLGKPVD+LW EYKTK K   +D KC +F IE +GVFALQL
Sbjct: 197 VAELNRKMRNEYSDDYFRQLLGKPVDELWTEYKTKGKLGILDDKCKAFEIEASGVFALQL 256

BLAST of Lsi03G005430 vs. ExPASy TrEMBL
Match: A0A6J1GMQ9 (uncharacterized protein LOC111455381 OS=Cucurbita moschata OX=3662 GN=LOC111455381 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.3e-41
Identity = 77/93 (82.80%), Postives = 86/93 (92.47%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+GN +APGGLIEGIADYVRLKSGYIPGHW  PG G RWD+GYDVTARFLDYLEG++SG 
Sbjct: 131 WNGNPSAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRSGF 190

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYK 98
           VA+LNRRL+NGYSADYF QLLGKPVD+LWA+YK
Sbjct: 191 VAELNRRLKNGYSADYFLQLLGKPVDRLWADYK 223

BLAST of Lsi03G005430 vs. ExPASy TrEMBL
Match: A0A6J1I4N3 (uncharacterized protein LOC111470952 OS=Cucurbita maxima OX=3661 GN=LOC111470952 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+GN ++PGGLIEGIADYVRLKSGYIPGHW  PG G RWD+GYDVTARFLDYLEG++SG 
Sbjct: 129 WNGNPSSPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRSGF 188

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRN 105
           VA+LNR L+NGYSADYF QLLGKPVDQLWA+Y  KA +RN
Sbjct: 189 VAELNRWLKNGYSADYFLQLLGKPVDQLWADY--KAAFRN 226

BLAST of Lsi03G005430 vs. NCBI nr
Match: XP_038888599.1 (uncharacterized protein LOC120078398 [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 105/125 (84.00%), Postives = 111/125 (88.80%), Query Frame = 0

Query: 1   MEGVWS-GNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEG 60
           M  +W  GN  APGGLIEGIADYVRLKSGYIPGHW EPG G  WDEGYDVTARFLDYLEG
Sbjct: 123 MTNIWQWGNSEAPGGLIEGIADYVRLKSGYIPGHWVEPGGGNWWDEGYDVTARFLDYLEG 182

Query: 61  VKSGLVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGV 120
           V+SGLVA+LNRRLRNGYSADYFRQ LGKPVD+LWAEYKTKAKY  +DKKC+SF IEVNGV
Sbjct: 183 VRSGLVAELNRRLRNGYSADYFRQFLGKPVDELWAEYKTKAKYGKLDKKCDSFEIEVNGV 242

Query: 121 FALQL 125
           FALQL
Sbjct: 243 FALQL 247

BLAST of Lsi03G005430 vs. NCBI nr
Match: XP_038888417.1 (uncharacterized protein LOC120078264 [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 4.1e-54
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           WSGNL AP GLIEGIADY+RLKSGYIPG W EPG G RWDEGYDVTARFLDYLEGV+SGL
Sbjct: 129 WSGNLEAPSGLIEGIADYIRLKSGYIPGQWVEPGGGNRWDEGYDVTARFLDYLEGVRSGL 188

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFAL 123
           VA LNRRLRNGYSADYFRQLLGKPVD+LWA+YKTKAKY  ++ KCN+F IEVNGVFAL
Sbjct: 189 VADLNRRLRNGYSADYFRQLLGKPVDELWAQYKTKAKYGKLNNKCNTFEIEVNGVFAL 246

BLAST of Lsi03G005430 vs. NCBI nr
Match: XP_038888579.1 (uncharacterized protein LOC120078385 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 5.9e-53
Identity = 99/120 (82.50%), Postives = 108/120 (90.00%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+GN  AP  LIEGIADYVRLKSGYIPG+W EPG G RWDEGYDVTARFLDYLEGV+SGL
Sbjct: 129 WNGNWEAPRWLIEGIADYVRLKSGYIPGYWVEPGGGNRWDEGYDVTARFLDYLEGVRSGL 188

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL 124
           VA+LNRRLRN YS DYFRQLLGKPVD+LWA+YKTKAKY  ++KKCN+F IEVNGVFALQL
Sbjct: 189 VAELNRRLRNDYSVDYFRQLLGKPVDELWAQYKTKAKYGKLNKKCNTFEIEVNGVFALQL 248

BLAST of Lsi03G005430 vs. NCBI nr
Match: XP_011658890.1 (uncharacterized protein LOC105434420 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLE-GVKSG 64
           W+GNL AP GLIEGIADYVRLKSGYIPG W EPG G  WDEGYDVTARFLDYLE  V+SG
Sbjct: 130 WNGNLKAPSGLIEGIADYVRLKSGYIPGTWVEPGGGNWWDEGYDVTARFLDYLERSVRSG 189

Query: 65  LVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQ 124
           LVA+LNR++RNGYS DYFRQL+GKPVD+LWAEYKTKAK+ N+D KCNSF IEV+GVFALQ
Sbjct: 190 LVAELNRKMRNGYSDDYFRQLMGKPVDELWAEYKTKAKFGNVDNKCNSFEIEVSGVFALQ 249

BLAST of Lsi03G005430 vs. NCBI nr
Match: XP_008454988.1 (PREDICTED: uncharacterized protein LOC103495268 [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 4.9e-47
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           WSGN+ AP GLIEGIADYVRLKSGYI   W EPG G RWDEGYDVTARFLDYLE V+SGL
Sbjct: 137 WSGNMKAPSGLIEGIADYVRLKSGYISETWVEPGGGNRWDEGYDVTARFLDYLERVRSGL 196

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL 124
           VA+LNR++RN YS DYFRQLLGKPVD+LW EYKTK K   +D KC +F IE +GVFALQL
Sbjct: 197 VAELNRKMRNEYSDDYFRQLLGKPVDELWTEYKTKGKLGILDDKCKAFEIEASGVFALQL 256

BLAST of Lsi03G005430 vs. TAIR 10
Match: AT2G15220.1 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-36
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+G   APGGLIEGIADYVRLK+GY P HW  PG G RWD+GYDVTARFLDY  G+++G 
Sbjct: 128 WNGAGRAPGGLIEGIADYVRLKAGYAPSHWVGPGRGDRWDQGYDVTARFLDYCNGLRNGF 187

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTK 100
           VA+LN+++RNGYS  +F  LLGK V+QLW EYK K
Sbjct: 188 VAELNKKMRNGYSDGFFVDLLGKDVNQLWREYKAK 222

BLAST of Lsi03G005430 vs. TAIR 10
Match: AT2G15130.1 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-32
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+G   APGGLIEGIADYVRLK+GY+  HW  PG G RWD+GYDVTARFL+Y   +++G 
Sbjct: 128 WNGAGRAPGGLIEGIADYVRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCNDLRNGF 187

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYK 98
           VA+LN+++R+ Y+  +F  LLGK V+QLW EYK
Sbjct: 188 VAELNKKMRSDYNDGFFVDLLGKDVNQLWREYK 220

BLAST of Lsi03G005430 vs. TAIR 10
Match: AT2G15130.2 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-32
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0

Query: 5   WSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGL 64
           W+G   APGGLIEGIADYVRLK+GY+  HW  PG G RWD+GYDVTARFL+Y   +++G 
Sbjct: 47  WNGAGRAPGGLIEGIADYVRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCNDLRNGF 106

Query: 65  VAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYK 98
           VA+LN+++R+ Y+  +F  LLGK V+QLW EYK
Sbjct: 107 VAELNKKMRSDYNDGFFVDLLGKDVNQLWREYK 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
C0HJG86.7e-0749.09Basic secretory protease (Fragments) OS=Boswellia serrata OX=613112 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K3221.3e-4880.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072800 PE=4 SV=1[more]
A0A5D3C5V22.4e-4775.83NtPRp27-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G... [more]
A0A1S3BZT82.4e-4775.83uncharacterized protein LOC103495268 OS=Cucumis melo OX=3656 GN=LOC103495268 PE=... [more]
A0A6J1GMQ97.3e-4182.80uncharacterized protein LOC111455381 OS=Cucurbita moschata OX=3662 GN=LOC1114553... [more]
A0A6J1I4N31.3e-4079.00uncharacterized protein LOC111470952 OS=Cucurbita maxima OX=3661 GN=LOC111470952... [more]
Match NameE-valueIdentityDescription
XP_038888599.12.2e-5584.00uncharacterized protein LOC120078398 [Benincasa hispida][more]
XP_038888417.14.1e-5484.75uncharacterized protein LOC120078264 [Benincasa hispida][more]
XP_038888579.15.9e-5382.50uncharacterized protein LOC120078385 [Benincasa hispida][more]
XP_011658890.11.5e-5180.99uncharacterized protein LOC105434420 [Cucumis sativus][more]
XP_008454988.14.9e-4775.83PREDICTED: uncharacterized protein LOC103495268 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G15220.15.4e-3667.37Plant basic secretory protein (BSP) family protein [more]
AT2G15130.12.8e-3261.29Plant basic secretory protein (BSP) family protein [more]
AT2G15130.22.8e-3261.29Plant basic secretory protein (BSP) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007541Uncharacterised protein family, basic secretory proteinPFAMPF04450BSPcoord: 5..96
e-value: 4.1E-34
score: 118.2
IPR007541Uncharacterised protein family, basic secretory proteinPANTHERPTHR33321FAMILY NOT NAMEDcoord: 5..99
NoneNo IPR availablePANTHERPTHR33321:SF12PLANT BASIC SECRETORY PROTEIN (BSP) FAMILY PROTEINcoord: 5..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G005430.1Lsi03G005430.1mRNA