Lsi03G003150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G003150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WIYLD domain-containing protein
Location	chr03: 3806161 .. 3810252 (-)
RNA-Seq Expression	Lsi03G003150
Synteny	Lsi03G003150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCAACATTAAGGGGTGAAAGGAACCGGTCGAACCGGAACCGTCGGTTCGGCTGCGCTCACGCTTTTCGATTCGGTTTGATTTTTATCATCGGCCGAACCGACCCAGATGTAGTTTGTTTTGGGTTTGCTTTCAATTTTCATCAAACACAGTAGGGTTTCTCGTCGTTCGTCTTTTCATTTCCGTTTCGTCAAACCCAAATGTAGTTTGCACTGGTCGTTCGTCTCTCTCTCTCAAGTCTTTCGTGGCCTTACTCACTCTCAGCCACCGCGTTGTCGACATTGTTGAAGCTAGGAGCTTCGGCCTCTTCTCTGCTAACATCGACAGTATCTGCGTCGACTTCGGAAAAGTAACGGTCGTCGGAACGGTGAGTGATTCTGATTAAACTTTGTTCGGCCTCTTTTTTGAAGTTGATTGGGCCGGGCATAACGGTGTGTGATTGTTAGATTGTGTAGCATTAAGATGGTATCAGAGCAACTGTTTGAGTGTTAGATGATTTCACCGTCAGCTTCGCCTCTTATTTGAAGTTGATTGCAGCTCCAGGCTTTTGGCCCTTTCTTCTTTCGACCTCTCATTTTCTGGTTCAACGTGATTCAACCGTTGGTCCCCGTTGTTGTAAGTAATCTCACCTACGAGGGACTTTAAACTGAGTTATTGTATTGACCCAATGATGAATTTGTTGTCCTTGTTATGGGGAAAATGTTGGCTGGCTATAAATTGAGTTTCTCGTTGTTAGGTCATAGAATGTTGTCTTTGGGGTGGGAAATTTTATTAGATATTGTATGAAGAATTGTTTTAGAAAATCAAGAAATTGATACAAATGTTTTTTTCTTTAATATAATTGAGAGGCCATTTACGATTTGAATAAAAAATGTTAAATATGGAAGGAGAGAGACAGGGGAAAGGAAAGAACGGTTTTTTGGACAGATGACCTACATTTTGTATTTCAATGTCGTTTGTGCGGTTTTTTAAAATAACGAAGGATAACCATATGCCATGAAAGATGTGTTAATTATCCAAATTGCCCCTTACACACTATTGGTAAGATTTACTAGTGAGAGAGTTAGACGGAGCCAAATGCAAGTATGAAGGAGTGAGGAAGGAAGAGTCCTAGTATGTGCACGTACTTTTATGGATGGATAATGAACCCTTCCTTAGTGCGTCTTGACAATGACAGATAATCATATTTCATTATTTTTAAAATTTAGGATAAACAATATTACGACAATGAAATTAAGATGATCCGTACAAAAACCAACGAAATGAAACCCATAAAAAAATCGTATAATTTTTCCCTGCCCTTCCTTTTTCTTTCATGTTCTGAACAAAATCACTCCCCTTTTCTTTTTTCATTGATTCCGACACCATCCTATTCTGCTGCTTATGGTATGTTTCTTCTCCAAGCTTATGATTCTTAGGTTTCATTTGAACCCATATTCCTGTTCTTCTTTCTCTTCTGTATGTTTATTGGGCGATTTTAGCATTGTAGGTGGAGTATTGTGATTCTTAGTAACTGCTTTATCAGGTTTCGTGGGTTCAGTCGTATGAGAAAGCTTTCTTTTTTCAGTTGCAGCTTGTTCGACAATTCTTTGTTGGGTTCTGAGGTTCAGAAATGGCTCCTAGAGTGCGAAGCAAAAAGGCATTTTATTTTGTTTCTTTAACCTTTTTGTTGATTCCTTTTTTCCTTCAACGAGCTTTCTTCATTTCTCCTTTCACTTGCTCTCTAGTAGATAGTAATAGTATTTTTCTAATCTTATCCTGATTGGCTCGCTTCAATTTAAACTTTAGAGGGTTAACTTACGAATTGATGCTGCGCTCGATGCTATGAAACCATTTGGATTTCCTCTGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTTAGTGTAGGTTTTTAAGATTTCCTCTCTGTTATTATTATTGTTATTGTGTGTGCTTCTTCTGTGGCTGTAGTTTGTAGAAACGTGGGTGGATTGGTTTTTCTTTTTCATCTCATAAAACAAGAAAGAAAGCTTATTAATTTATCCCTTTTCTTATATTCAGTTTGGGGTTATGTCATTATTTTATGGGTGGTGCCTGGAAATGTTTTATTTGTTTCGTTTCTTTAATTTGATTTTCTTGCAATCATTGCGACATTTTGTTTCACTCATACATTATGGGAAGAATTTTCTTTAGGTCTATGGAGGAGACGATGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATCGATACCCTTCTCGAGAAACAGAACAAGGGTGCAATAGAGTTGGTTAGTTTTTCCAACTACTTTTGTTGCATTTGGTTCTTGACATGCACACATTTTTTACGCAAATGGTTTATGGGTTATTAAAGATGCCAACGGAGAGCCACTGATGTTTGTTGTGTTGGGTTAAGAAAATGCTAGCTTTGTAGATTTTTGTTAACTATTAGCATGAGGCATCCATCTTAAATGGAAAGGTACGCACCGGACTGTGTTTTATATAAACAAGAATCGAAATATTTAGCTCCAAGAGAAACTCGAATTCAAAATTTCAAAGGGGTGTTTGGCCCAAGGAGTTGGAATTGGGACAAGTGGAGTTGTGAACTCCACTTCTTATTTGACCCAAGGAGTTCGTGAACCCCACAACTAAAAGACGTCAATTTTATGCTTTATTAACTCCTTACATTGTGGGTCCTACAACTTTTTAACTCTCTAGACTTCACAACTTCACTTCTTGTCCCAAATACCCCTAAATTGGTGTTCGTGAGGTGCCAATACTTTTTTGCTAGTCCTGGTCAATTGTCAGCAGTTAGCACAGTTTGCTCATGCATATAGTTTTTGTTTCTTTTTTACTTGGAGTACTTTTAGTTGAACTTCTAATCACAATATTTCTACCGTGTGTGTCAACTGGGAAGTGTGTTTGTAGGTCTATTGGCCACTTTAAATTCAAATTGTTAATGACAAATGGCTGCTGTTATGTTGAACTGTGTAGAGGATTGGTTCTTCTCTGGCTAGCCTGTTGATTCTTTTTTGAAGTCACGAGTGTTCGTTTTAATCTTTATCCCCTCTGGTTATCAGAATAGTGCACAGTGCACACCTTGTATTTTTTCCAATGTTTTATTTCTTCAGTATTTCCACGTTGAATGTCTATTTTCTGAAGGTTCATGATAATGAAAGAGCTAAAGATCATCAGGAGACCTCAGTAGCTAGCTGTTCATCGAGTGCTATCGGTGAAACTAGTGAAACTACAAGGTTCACAGCCACATTGCCTGCAAATGATTCAGGTAATTAGTATCCCATACCTTATCAAAATTTACATCGTTCTATAATTACTGCTATCAATTCCTTCAAATGTAATTTGGTGAGTTTAGTCTTATAGTTGATGATTGGTGCCTTAAACTTGTAACCTTACCATGTTTTAGATACATTATTTCCTGGAGATGAAAGTTATTGGAAGGACGATAAAGCTTCTATTGATGATGACCATTTTAGGAGGAGTACTCTTAACCAGTCTTTACCTGCATATACCCCCAAAATACGAAGGCGAAAACCTTATCATGGCTGGATTGGTAAAGACGACAATGAGGAGGATCTTGTGTACTTAACCCCTGATCATTTGCCTGAAGAGTTTGCCAAGTTACTCGGGTCTCATCCACTAAAAAAAAGAAAGAAGCGTTGGGATGTGGAACCTGTAGGATCATGAGTTTTTATTTGACTGGTTCGTCTATCGTTGGATGTTGGTGACTTGAGGGAAGAAGATAGGTGAAAGTGTAAATGGTAGTTTTTTGTTTTTCTTTTCCAATTATTTAAAAAGTACAATAGGGGTCGGGGATTCGAACTACGGACCTCTTGCTCACCAACACACAGTGCATGCCGGTTTAGCTGTGCCTTCTTTGAAAATGTAAATGGTAATTTTGATGCTTTGCTTATTAGCTCAATGATTTATTATTTTTAGAACTTTCTCTCCAGGAGGCAGCTTCATTTCCTTGTGAGACAAGGAAAAGCTGTATCATGAATTTCACCCTCTTCTCTGTTAAGCTGGGAGACCATTTTTTCTGTAAACAATTTTGGTTAAATTATAAATTTGGGCTTTTATGGATTG

mRNA sequence

ATGTTCCCAACATTAAGGGGTGAAAGGAACCGGTCGAACCGGAACCGTCGGTTCGGCTGCGCTCACGCTTTTCGATTCGTAGGGTTTCTCGTCGTTCGTCTTTTCATTTCCGTTTCGTCAAACCCAAATGTAGTTTGCACTGGTCGTTCGTCTCTCTCTCTCAAGTCTTTCGTGGCCTTACTCACTCTCAGCCACCGCGTTGTCGACATTGTTGAAGCTAGGAGCTTCGGCCTCTTCTCTGCTAACATCGACAGTATCTGCGTCGACTTCGGAAAAGTAACGGTCGTCGGAACGCTCCAGGCTTTTGGCCCTTTCTTCTTTCGACCTCTCATTTTCTGGTTCAACGTGATTCAACCGTTGGTCCCCGTTGTTAGGGTTAACTTACGAATTGATGCTGCGCTCGATGCTATGAAACCATTTGGATTTCCTCTGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTTAGTGTCTATGGAGGAGACGATGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATCGATACCCTTCTCGAGAAACAGAACAAGGGTGCAATAGAGTTGGTTCATGATAATGAAAGAGCTAAAGATCATCAGGAGACCTCAGTAGCTAGCTGTTCATCGAGTGCTATCGGTGAAACTAGTGAAACTACAAGGTTCACAGCCACATTGCCTGCAAATGATTCAGATACATTATTTCCTGGAGATGAAAGTTATTGGAAGGACGATAAAGCTTCTATTGATGATGACCATTTTAGGAGGAGTACTCTTAACCAGTCTTTACCTGCATATACCCCCAAAATACGAAGGCGAAAACCTTATCATGGCTGGATTGGTAAAGACGACAATGAGGAGGATCTTGTGTACTTAACCCCTGATCATTTGCCTGAAGAGTTTGCCAAGTTACTCGGGTCTCATCCACTAAAAAAAAGAAAGAAGCGTTGGGATGTGGAACCTGTAGGATCATGAGTTTTTATTTGACTGGTTCGTCTATCGTTGGATGTTGGTGACTTGAGGGAAGAAGATAGGTGAAAGTGTAAATGGTAGTTTTTTGTTTTTCTTTTCCAATTATTTAAAAAGTACAATAGGGGTCGGGGATTCGAACTACGGACCTCTTGCTCACCAACACACAGTGCATGCCGGTTTAGCTGTGCCTTCTTTGAAAATGTAAATGGTAATTTTGATGCTTTGCTTATTAGCTCAATGATTTATTATTTTTAGAACTTTCTCTCCAGGAGGCAGCTTCATTTCCTTGTGAGACAAGGAAAAGCTGTATCATGAATTTCACCCTCTTCTCTGTTAAGCTGGGAGACCATTTTTTCTGTAAACAATTTTGGTTAAATTATAAATTTGGGCTTTTATGGATTG

Coding sequence (CDS)

ATGTTCCCAACATTAAGGGGTGAAAGGAACCGGTCGAACCGGAACCGTCGGTTCGGCTGCGCTCACGCTTTTCGATTCGTAGGGTTTCTCGTCGTTCGTCTTTTCATTTCCGTTTCGTCAAACCCAAATGTAGTTTGCACTGGTCGTTCGTCTCTCTCTCTCAAGTCTTTCGTGGCCTTACTCACTCTCAGCCACCGCGTTGTCGACATTGTTGAAGCTAGGAGCTTCGGCCTCTTCTCTGCTAACATCGACAGTATCTGCGTCGACTTCGGAAAAGTAACGGTCGTCGGAACGCTCCAGGCTTTTGGCCCTTTCTTCTTTCGACCTCTCATTTTCTGGTTCAACGTGATTCAACCGTTGGTCCCCGTTGTTAGGGTTAACTTACGAATTGATGCTGCGCTCGATGCTATGAAACCATTTGGATTTCCTCTGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTTAGTGTCTATGGAGGAGACGATGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATCGATACCCTTCTCGAGAAACAGAACAAGGGTGCAATAGAGTTGGTTCATGATAATGAAAGAGCTAAAGATCATCAGGAGACCTCAGTAGCTAGCTGTTCATCGAGTGCTATCGGTGAAACTAGTGAAACTACAAGGTTCACAGCCACATTGCCTGCAAATGATTCAGATACATTATTTCCTGGAGATGAAAGTTATTGGAAGGACGATAAAGCTTCTATTGATGATGACCATTTTAGGAGGAGTACTCTTAACCAGTCTTTACCTGCATATACCCCCAAAATACGAAGGCGAAAACCTTATCATGGCTGGATTGGTAAAGACGACAATGAGGAGGATCTTGTGTACTTAACCCCTGATCATTTGCCTGAAGAGTTTGCCAAGTTACTCGGGTCTCATCCACTAAAAAAAAGAAAGAAGCGTTGGGATGTGGAACCTGTAGGATCATGA

Protein sequence

MFPTLRGERNRSNRNRRFGCAHAFRFVGFLVVRLFISVSSNPNVVCTGRSSLSLKSFVALLTLSHRVVDIVEARSFGLFSANIDSICVDFGKVTVVGTLQAFGPFFFRPLIFWFNVIQPLVPVVRVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGAIELVHDNERAKDHQETSVASCSSSAIGETSETTRFTATLPANDSDTLFPGDESYWKDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSHPLKKRKKRWDVEPVGS

Homology

[Close]

BLAST of Lsi03G003150 vs. ExPASy TrEMBL
Match: A0A5D3DLD6 (Ubiquitin-binding WIYLD domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002240 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 6.5e-81
Identity = 163/203 (80.30%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 124 VRVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQ 183
           +R NLRIDAALDAMK FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQ
Sbjct: 1   MRPNLRIDAALDAMKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQ 60

Query: 184 NKGAIELVHDNERAKDHQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESY 243
           N+GAIE+VHDNER  DHQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESY
Sbjct: 61  NEGAIEVVHDNERV-DHQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESY 120

Query: 244 WKDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEF 303
           W ++KAS+DDDHF RST NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE 
Sbjct: 121 W-NNKASVDDDHF-RSTFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEEL 180

Query: 304 AKLLGSHPLKKRKKRWDVEPVGS 325
           AKLL    LKKRKKRWDVE   S
Sbjct: 181 AKLLIPGALKKRKKRWDVESAES 200

[Close]

BLAST of Lsi03G003150 vs. ExPASy TrEMBL
Match: A0A1S3B3F8 (uncharacterized protein LOC103485563 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 8.5e-81
Identity = 163/202 (80.69%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 125 RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQN 184
           R NLRIDAALDAMK FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQN
Sbjct: 10  RPNLRIDAALDAMKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQN 69

Query: 185 KGAIELVHDNERAKDHQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESYW 244
           +GAIE+VHDNER  DHQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESYW
Sbjct: 70  EGAIEVVHDNERV-DHQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESYW 129

Query: 245 KDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFA 304
            ++KAS+DDDHF RST NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE A
Sbjct: 130 -NNKASVDDDHF-RSTFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEELA 189

Query: 305 KLLGSHPLKKRKKRWDVEPVGS 325
           KLL    LKKRKKRWDVE   S
Sbjct: 190 KLLIPGALKKRKKRWDVESAES 208

[Close]

BLAST of Lsi03G003150 vs. ExPASy TrEMBL
Match: A0A0A0K7Q2 (WIYLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011060 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80
Identity = 158/199 (79.40%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 125 RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQN 184
           R NLRIDAALDAMK FGFP KLVRDTVKELL VYGGDDGWVFIEEGSY LLID+LLEKQN
Sbjct: 10  RPNLRIDAALDAMKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYALLIDSLLEKQN 69

Query: 185 KGAIELVHDNERAKDHQETSVASCSSSA--IGETSETTRFTATLPANDSDTLFPGDESYW 244
           +GAIE+VHDNER  DHQ TSVA CS SA  +  ++E    TA LPAND DTLFPGDESYW
Sbjct: 70  EGAIEVVHDNERV-DHQYTSVAGCSLSATDVTPSNEAIMTTAALPANDLDTLFPGDESYW 129

Query: 245 KDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFA 304
            ++K S+DDDHF RST NQSLPAYTPKIRRRK YHGW+GKDD EEDLVYLTPDHLPEE A
Sbjct: 130 -NNKGSVDDDHF-RSTFNQSLPAYTPKIRRRKAYHGWVGKDDKEEDLVYLTPDHLPEELA 189

Query: 305 KLLGSHPLKKRKKRWDVEP 322
           KLL +  LKKRKKRWDVEP
Sbjct: 190 KLLIAGALKKRKKRWDVEP 205

[Close]

BLAST of Lsi03G003150 vs. ExPASy TrEMBL
Match: A0A1S3B448 (uncharacterized protein LOC103485563 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.5e-74
Identity = 151/189 (79.89%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 138 KPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGAIELVHDNERA 197
           K FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQN+GAIE+VHDNER 
Sbjct: 8   KKFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQNEGAIEVVHDNERV 67

Query: 198 KDHQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESYWKDDKASIDDDHFR 257
            DHQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESYW ++KAS+DDDHF 
Sbjct: 68  -DHQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESYW-NNKASVDDDHF- 127

Query: 258 RSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSHPLKKRKK 317
           RST NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE AKLL    LKKRKK
Sbjct: 128 RSTFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEELAKLLIPGALKKRKK 187

Query: 318 RWDVEPVGS 325
           RWDVE   S
Sbjct: 188 RWDVESAES 193

[Close]

BLAST of Lsi03G003150 vs. ExPASy TrEMBL
Match: A0A1S3B481 (uncharacterized protein LOC103485563 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 150/187 (80.21%), Postives = 158/187 (84.49%), Query Frame = 0


Query: 140 FGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGAIELVHDNERAKD 199
           FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQN+GAIE+VHDNER  D
Sbjct: 2   FGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQNEGAIEVVHDNERV-D 61

Query: 200 HQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESYWKDDKASIDDDHFRRS 259
           HQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESYW ++KAS+DDDHF RS
Sbjct: 62  HQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESYW-NNKASVDDDHF-RS 121

Query: 260 TLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSHPLKKRKKRW 319
           T NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE AKLL    LKKRKKRW
Sbjct: 122 TFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEELAKLLIPGALKKRKKRW 181

Query: 320 DVEPVGS 325
           DVE   S
Sbjct: 182 DVESAES 185

[Close]

BLAST of Lsi03G003150 vs. NCBI nr
Match: XP_038884315.1 (uncharacterized protein LOC120075188 isoform X2 [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-92
Identity = 175/202 (86.63%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 125 RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQN 184
           RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQ 
Sbjct: 10  RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQK 69

Query: 185 KGAIELVHDNERAKDHQETSVASCSSSAIGE--TSETTRFTATLPANDSDTLFPGDESYW 244
           +GAIELVHDNERAKDHQETS+ASCSSSAI E  ++E T  TATLPANDSDTLFPGDESYW
Sbjct: 70  EGAIELVHDNERAKDHQETSIASCSSSAINEIPSNEVTMITATLPANDSDTLFPGDESYW 129

Query: 245 KDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFA 304
           K DKAS+D DH  RST NQSLPAYTPKIRRRKPYHGWIG DD EEDLVYLTPDHLPEEFA
Sbjct: 130 KSDKASVDHDHL-RSTFNQSLPAYTPKIRRRKPYHGWIGNDDKEEDLVYLTPDHLPEEFA 189

Query: 305 KLLGSHPLKKRKKRWDVEPVGS 325
           KLL +   +KRKKRWDVEP+ S
Sbjct: 190 KLLNA--FRKRKKRWDVEPLKS 208

[Close]

BLAST of Lsi03G003150 vs. NCBI nr
Match: XP_038884313.1 (uncharacterized protein LOC120075188 isoform X1 [Benincasa hispida] >XP_038884314.1 uncharacterized protein LOC120075188 isoform X1 [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-90
Identity = 175/208 (84.13%), Postives = 183/208 (87.98%), Query Frame = 0


Query: 125 RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQN 184
           RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQ 
Sbjct: 10  RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQK 69

Query: 185 KGAIELVHDNERAKDHQETSVASCSSSAIGE--TSETTRFTATLPANDS------DTLFP 244
           +GAIELVHDNERAKDHQETS+ASCSSSAI E  ++E T  TATLPANDS      DTLFP
Sbjct: 70  EGAIELVHDNERAKDHQETSIASCSSSAINEIPSNEVTMITATLPANDSVPHYVLDTLFP 129

Query: 245 GDESYWKDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDH 304
           GDESYWK DKAS+D DH  RST NQSLPAYTPKIRRRKPYHGWIG DD EEDLVYLTPDH
Sbjct: 130 GDESYWKSDKASVDHDHL-RSTFNQSLPAYTPKIRRRKPYHGWIGNDDKEEDLVYLTPDH 189

Query: 305 LPEEFAKLLGSHPLKKRKKRWDVEPVGS 325
           LPEEFAKLL +   +KRKKRWDVEP+ S
Sbjct: 190 LPEEFAKLLNA--FRKRKKRWDVEPLKS 214

[Close]

BLAST of Lsi03G003150 vs. NCBI nr
Match: XP_038884316.1 (uncharacterized protein LOC120075188 isoform X3 [Benincasa hispida] >XP_038884318.1 uncharacterized protein LOC120075188 isoform X3 [Benincasa hispida])

HSP 1 Score: 322.0 bits (824), Expect = 5.8e-84
Identity = 163/196 (83.16%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 137 MKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGAIELVHDNER 196
           MKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQ +GAIELVHDNER
Sbjct: 1   MKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQKEGAIELVHDNER 60

Query: 197 AKDHQETSVASCSSSAIGE--TSETTRFTATLPANDS------DTLFPGDESYWKDDKAS 256
           AKDHQETS+ASCSSSAI E  ++E T  TATLPANDS      DTLFPGDESYWK DKAS
Sbjct: 61  AKDHQETSIASCSSSAINEIPSNEVTMITATLPANDSVPHYVLDTLFPGDESYWKSDKAS 120

Query: 257 IDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSH 316
           +D DH  RST NQSLPAYTPKIRRRKPYHGWIG DD EEDLVYLTPDHLPEEFAKLL + 
Sbjct: 121 VDHDHL-RSTFNQSLPAYTPKIRRRKPYHGWIGNDDKEEDLVYLTPDHLPEEFAKLLNA- 180

Query: 317 PLKKRKKRWDVEPVGS 325
             +KRKKRWDVEP+ S
Sbjct: 181 -FRKRKKRWDVEPLKS 193

[Close]

BLAST of Lsi03G003150 vs. NCBI nr
Match: TYK24425.1 (ubiquitin-binding WIYLD domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-80
Identity = 163/203 (80.30%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 124 VRVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQ 183
           +R NLRIDAALDAMK FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQ
Sbjct: 1   MRPNLRIDAALDAMKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQ 60

Query: 184 NKGAIELVHDNERAKDHQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESY 243
           N+GAIE+VHDNER  DHQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESY
Sbjct: 61  NEGAIEVVHDNERV-DHQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESY 120

Query: 244 WKDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEF 303
           W ++KAS+DDDHF RST NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE 
Sbjct: 121 W-NNKASVDDDHF-RSTFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEEL 180

Query: 304 AKLLGSHPLKKRKKRWDVEPVGS 325
           AKLL    LKKRKKRWDVE   S
Sbjct: 181 AKLLIPGALKKRKKRWDVESAES 200

[Close]

BLAST of Lsi03G003150 vs. NCBI nr
Match: XP_008441447.1 (PREDICTED: uncharacterized protein LOC103485563 isoform X1 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.8e-80
Identity = 163/202 (80.69%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 125 RVNLRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQN 184
           R NLRIDAALDAMK FGFP KLVRDTVKELL VYGGDDGWVFIEEGSYTLLIDTLLEKQN
Sbjct: 10  RPNLRIDAALDAMKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYTLLIDTLLEKQN 69

Query: 185 KGAIELVHDNERAKDHQETSVASCSSSAIGET--SETTRFTATLPANDSDTLFPGDESYW 244
           +GAIE+VHDNER  DHQ TSVA CS SAI  T  +E    TATLPAN+ DTLFPGDESYW
Sbjct: 70  EGAIEVVHDNERV-DHQCTSVAGCSLSAIDVTPSNEAIITTATLPANELDTLFPGDESYW 129

Query: 245 KDDKASIDDDHFRRSTLNQSLPAYTPKIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFA 304
            ++KAS+DDDHF RST NQSLPAYTPKIRRRK YHGWIGKD+ EEDLVYLTPDHLPEE A
Sbjct: 130 -NNKASVDDDHF-RSTFNQSLPAYTPKIRRRKAYHGWIGKDNKEEDLVYLTPDHLPEELA 189

Query: 305 KLLGSHPLKKRKKRWDVEPVGS 325
           KLL    LKKRKKRWDVE   S
Sbjct: 190 KLLIPGALKKRKKRWDVESAES 208

[Close]

BLAST of Lsi03G003150 vs. TAIR 10
Match: AT2G40020.1 (Nucleolar histone methyltransferase-related protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10
Identity = 62/233 (26.61%), Postives = 99/233 (42.49%), Query Frame = 0


Query: 128 LRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGA 187
           +R DAA D M+ FGF   ++ +++KELL VY  +D W  IE+ SY  L+   LEKQ +  
Sbjct: 1   MREDAARDRMRGFGFHEHVISESIKELLEVY--EDQWFLIEDDSYGPLLAICLEKQEEKE 60

Query: 188 IELV----------HDNERAKDHQETSVA--------------------------SCSSS 247
            +L           H+ E A++ Q   +A                          S +S 
Sbjct: 61  KQLAEVQANQLPENHNEEMAEEEQPNQLAVEIHEEEKEQEQDMHIEYGRDQADELSINSE 120

Query: 248 AIGETSETTRFTATLPANDSDTLFPGDESY---WKDDKASIDDDHFRRSTLNQSLPAYTP 307
           A+ + S          ++ + +   G E+    W  D+   D +        ++ P   P
Sbjct: 121 AVNDPSPAAIHLGEASSDYAQSSVRGVENLHCGWLIDEEETDPEEETDPEEKETEPE-DP 180

Query: 308 KIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSHPLKKRKK---RWD 319
           K +  +P     G DD   +++ LTP+ L EE  +LL     +KR+K   RWD
Sbjct: 181 KEKETEPEEDSDGDDD---EIIQLTPEPLCEELQELLREVRGQKRRKKEMRWD 227

[Close]

BLAST of Lsi03G003150 vs. TAIR 10
Match: AT2G40020.3 (Nucleolar histone methyltransferase-related protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10
Identity = 62/233 (26.61%), Postives = 99/233 (42.49%), Query Frame = 0


Query: 128 LRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGA 187
           +R DAA D M+ FGF   ++ +++KELL VY  +D W  IE+ SY  L+   LEKQ +  
Sbjct: 13  MREDAARDRMRGFGFHEHVISESIKELLEVY--EDQWFLIEDDSYGPLLAICLEKQEEKE 72

Query: 188 IELV----------HDNERAKDHQETSVA--------------------------SCSSS 247
            +L           H+ E A++ Q   +A                          S +S 
Sbjct: 73  KQLAEVQANQLPENHNEEMAEEEQPNQLAVEIHEEEKEQEQDMHIEYGRDQADELSINSE 132

Query: 248 AIGETSETTRFTATLPANDSDTLFPGDESY---WKDDKASIDDDHFRRSTLNQSLPAYTP 307
           A+ + S          ++ + +   G E+    W  D+   D +        ++ P   P
Sbjct: 133 AVNDPSPAAIHLGEASSDYAQSSVRGVENLHCGWLIDEEETDPEEETDPEEKETEPE-DP 192

Query: 308 KIRRRKPYHGWIGKDDNEEDLVYLTPDHLPEEFAKLLGSHPLKKRKK---RWD 319
           K +  +P     G DD   +++ LTP+ L EE  +LL     +KR+K   RWD
Sbjct: 193 KEKETEPEEDSDGDDD---EIIQLTPEPLCEELQELLREVRGQKRRKKEMRWD 239

[Close]

BLAST of Lsi03G003150 vs. TAIR 10
Match: AT2G40020.2 (Nucleolar histone methyltransferase-related protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 128 LRIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQNKGA 187
           +R DAA D M+ FGF   ++ +++KELL VY  +D W  IE+ SY  L+   LEKQ +  
Sbjct: 13  MREDAARDRMRGFGFHEHVISESIKELLEVY--EDQWFLIEDDSYGPLLAICLEKQEEKE 72

Query: 188 IEL--VHDNERAKDHQE 203
            +L  V  N+  ++H E
Sbjct: 73  KQLAEVQANQLPENHNE 87

[Close]

BLAST of Lsi03G003150 vs. TAIR 10
Match: AT1G45248.2 (Nucleolar histone methyltransferase-related protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 129 RIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTL-LIDTLLEKQNK 186
           R DAA D MK FGF   ++  ++K++L VY G+D W  IE+ +Y + LI  L  K+NK
Sbjct: 16  REDAARDRMKEFGFKKPVINASIKQVLKVY-GEDQWFLIEDANYEVSLIFPLKSKRNK 72

[Close]

BLAST of Lsi03G003150 vs. TAIR 10
Match: AT1G45248.3 (Nucleolar histone methyltransferase-related protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 129 RIDAALDAMKPFGFPLKLVRDTVKELLSVYGGDDGWVFIEEGSYTL-LIDTLLEKQNK 186
           R DAA D MK FGF   ++  ++K++L VY G+D W  IE+ +Y + LI  L  K+NK
Sbjct: 16  REDAARDRMKEFGFKKPVINASIKQVLKVY-GEDQWFLIEDANYEVSLIFPLKSKRNK 72

The following BLAST results are available for this feature:

BLAST of Lsi03G003150 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G003150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLD6	6.5e-81	80.30	Ubiquitin-binding WIYLD domain protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B3F8	8.5e-81	80.69	uncharacterized protein LOC103485563 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K7Q2	2.5e-80	79.40	WIYLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011060 PE=4 ...	[more]
A0A1S3B448	3.5e-74	79.89	uncharacterized protein LOC103485563 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B481	1.0e-73	80.21	uncharacterized protein LOC103485563 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lsi03G003150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884315.1	1.2e-92	86.63	uncharacterized protein LOC120075188 isoform X2 [Benincasa hispida]	[more]
XP_038884313.1	1.1e-90	84.13	uncharacterized protein LOC120075188 isoform X1 [Benincasa hispida] >XP_03888431...	[more]
XP_038884316.1	5.8e-84	83.16	uncharacterized protein LOC120075188 isoform X3 [Benincasa hispida] >XP_03888431...	[more]
TYK24425.1	1.3e-80	80.30	ubiquitin-binding WIYLD domain protein [Cucumis melo var. makuwa]	[more]
XP_008441447.1	1.8e-80	80.69	PREDICTED: uncharacterized protein LOC103485563 isoform X1 [Cucumis melo]	[more]

BLAST of Lsi03G003150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40020.1	3.5e-10	26.61	Nucleolar histone methyltransferase-related protein	[more]
AT2G40020.3	3.5e-10	26.61	Nucleolar histone methyltransferase-related protein	[more]
AT2G40020.2	2.1e-07	40.26	Nucleolar histone methyltransferase-related protein	[more]
AT1G45248.2	5.2e-06	44.83	Nucleolar histone methyltransferase-related protein	[more]
AT1G45248.3	5.2e-06	44.83	Nucleolar histone methyltransferase-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018848	WIYLD domain	PFAM	PF10440	WIYLD	coord: 129..184 e-value: 6.4E-21 score: 73.9
IPR043017	WIYLD domain superfamily	GENE3D	1.10.8.850		coord: 118..185 e-value: 3.8E-18 score: 66.9
None	No IPR available	PANTHER	PTHR34271	NUCLEOLAR HISTONE METHYLTRANSFERASE-RELATED PROTEIN	coord: 129..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003150.1	Lsi03G003150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0008237	metallopeptidase activity