Lsi03G002860 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G002860
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein EARLY RESPONSIVE TO DEHYDRATION 15-like
Location	chr03: 3473594 .. 3474564 (-)
RNA-Seq Expression	Lsi03G002860
Synteny	Lsi03G002860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACGGCGTGCAGTGCAGTGTCATAAAGTTTCGTCGATTAGTCGAAGAAATCAACCCGTTTCAAAAACCTTGGGCCGAATTCCATCTTCTTTTGCCTTTAAACAGTGTCATTTCCGTAATAAAACGAAACCCTGAGTGCTATTTCACTTTTCATTTTTATATATTTCATCCCCAATCTCTCCATAAAACTTCGTCTTCAATCTCAAGCTTCAATTAAGCAAGCAGTGGCTATGGATGTGGTTACTCAAAGAAACTCGTCTTCCTCCGTTTCCATGTTGAATCCTAACGCTCCTTTGTTCGTTCCGATGGCGTATAGGACGGTAGAAGATTTCTCCGACCAGTGGTGGAATCTGATCCACTCGTCGCCGTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTCCGTTTGCAGAAAATGAAGAATTTGTTCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCGAGTCATCGATTCAGTCAATTTGTTTTGTAATTTGTTGTTTACTAATTTGTTGTTTCTTCTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAGTTTTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATAGACTTGACGCGGTATTTCCAACTCATCGAGTACGTTTCTTCATCAGAACTCAGGAACCAGTTTGAATTGTTGTTGATCTAGGTTTTCCATTTCGTTTATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGGTCTGTGTTTAGTTTATGTAAATTTGTACCAAGTCTTACTTTCAATTATGATATAATAAAAAGAGTTTCAAAATTCTCAACAAA

mRNA sequence

CAAAAACGGCGTGCAGTGCAGTGTCATAAAGTTTCGTCGATTAGTCGAAGAAATCAACCCGTTTCAAAAACCTTGGGCCGAATTCCATCTTCTTTTGCCTTTAAACAGTGTCATTTCCGTAATAAAACGAAACCCTGAGTGCTATTTCACTTTTCATTTTTATATATTTCATCCCCAATCTCTCCATAAAACTTCGTCTTCAATCTCAAGCTTCAATTAAGCAAGCAGTGGCTATGGATGTGGTTACTCAAAGAAACTCGTCTTCCTCCGTTTCCATGTTGAATCCTAACGCTCCTTTGTTCGTTCCGATGGCGTATAGGACGGTAGAAGATTTCTCCGACCAGTGGTGGAATCTGATCCACTCGTCGCCGTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTCCGTTTGCAGAAAATGAAGAATTTGTTCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAGTTTTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATAGACTTGACGCGGTATTTCCAACTCATCGAGTACGTTTCTTCATCAGAACTCAGGAACCAGTTTGAATTGTTGTTGATCTAGGTTTTCCATTTCGTTTATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGGTCTGTGTTTAGTTTATGTAAATTTGTACCAAGTCTTACTTTCAATTATGATATAATAAAAAGAGTTTCAAAATTCTCAACAAA

Coding sequence (CDS)

ATGGATGTGGTTACTCAAAGAAACTCGTCTTCCTCCGTTTCCATGTTGAATCCTAACGCTCCTTTGTTCGTTCCGATGGCGTATAGGACGGTAGAAGATTTCTCCGACCAGTGGTGGAATCTGATCCACTCGTCGCCGTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTCCGTTTGCAGAAAATGAAGAATTTGTTCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAGTTTTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATAG

Protein sequence

MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKVSPRTIHQPR

Homology

[Close]

BLAST of Lsi03G002860 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-34
Identity = 72/130 (55.38%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 12  SVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAENEE 71
           S S LNPNAP+FVP+AYRTVEDFSDQWWNL+HSSPWFR+YWL+E FQDPQ    F  ++ 
Sbjct: 5   SASSLNPNAPMFVPLAYRTVEDFSDQWWNLVHSSPWFRDYWLRECFQDPQ----FQNDDA 64

Query: 72  FVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSG-AEVPKYAQKAPKIVNVK 131
           F     +  FD   + ++E+E +  K++V +G  KW+    G A+ P+Y +KAPK V  K
Sbjct: 65  F-----DFDFDLDLQDEDEKERKEGKEVVSLGVLKWRSCGGGWAQAPRYVEKAPKFVKPK 124

Query: 132 VSPRTIHQPR 141
           VSPR IHQPR
Sbjct: 125 VSPRAIHQPR 125

[Close]

BLAST of Lsi03G002860 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-14
Identity = 55/156 (35.26%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Lsi03G002860 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP---QNDLPFAE- 72
           +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL    ++     +D    E 
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEE 68

Query: 73  --NEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKI 132
              E     D  S  D  T       L+   ++      K  +++  +  PKY QK  K 
Sbjct: 69  EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK--KY 128

Query: 133 VNVKVSPRT---IHQPR 141
           +N   + R    I+QPR
Sbjct: 129 MNPNFNCRRNHHIYQPR 143

[Close]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL
Match: A0A5D3BZS0 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001350 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LPF ENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELPFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL
Match: A0A0A0KBP8 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.6e-71
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+L F ENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL
Match: Q6ELF9 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-66
Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+L F ENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL
Match: A0A6J1JP33 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487067 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 124/140 (88.57%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QND  FAENEE VLPDLE+ FDD  RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFDDLARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL
Match: A0A6J1JQA7 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111488890 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNDL FAEN+E VLPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. NCBI nr
Match: KAA0052043.1 (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa] >TYK04518.1 Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 4.9e-72
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LPF ENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELPFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. NCBI nr
Match: KGN45812.1 (hypothetical protein Csa_005499 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 5.5e-71
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+L F ENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. NCBI nr
Match: XP_038884078.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 133/140 (95.00%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSS+VSMLNPNAPLFVPMAYRTVEDFSDQWW+LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSAVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QND  FAENEEF+LPDLESF DDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNDHSFAENEEFILPDLESFLDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. NCBI nr
Match: KAG6602602.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.9 bits (668), Expect = 3.1e-66
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVV +RNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QND  FAENEE VLPDLE+ F+DF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Lsi03G002860 vs. NCBI nr
Match: NP_001295813.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 6.9e-66
Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LI SSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLPFAENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+L F ENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of Lsi03G002860 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) )

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-15
Identity = 55/156 (35.26%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Lsi03G002860 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) )

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-15
Identity = 55/156 (35.26%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Lsi03G002860 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) )

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-15
Identity = 55/156 (35.26%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Lsi03G002860 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) )

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-15
Identity = 55/156 (35.26%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Lsi03G002860 vs. TAIR 10
Match: AT2G41430.3 (dehydration-induced protein (ERD15) )

HSP 1 Score: 67.8 bits (164), Expect = 8.0e-12
Identity = 33/83 (39.76%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 14 SMLNPNAPLFVPMAYRTVEDFSDQWWNLIHSSPWFREYWLQERFQDPQNDLPFAEN---- 73
          S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9  STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74 ----------EEFVLPDLESFFD 83
                    E F   D+E FFD
Sbjct: 69 GHIDVADLLPESFDFDDMEDFFD 91

The following BLAST results are available for this feature:

BLAST of Lsi03G002860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1JIC4	4.2e-34	55.38	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 ...	[more]
Q39096	3.7e-14	35.26	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q94AR4	1.2e-09	32.85	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Lsi03G002860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZS0	2.4e-72	97.14	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. ma...	[more]
A0A0A0KBP8	2.6e-71	95.71	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3...	[more]
Q6ELF9	3.3e-66	95.45	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3...	[more]
A0A6J1JP33	1.3e-65	88.57	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JQA7	1.1e-64	87.86	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi03G002860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052043.1	4.9e-72	97.14	Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. maku...	[more]
KGN45812.1	5.5e-71	95.71	hypothetical protein Csa_005499 [Cucumis sativus]	[more]
XP_038884078.1	3.5e-70	95.00	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Benincasa hispida]	[more]
KAG6602602.1	3.1e-66	89.29	Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subs...	[more]
NP_001295813.1	6.9e-66	95.45	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 po...	[more]

BLAST of Lsi03G002860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41430.1	2.7e-15	35.26	dehydration-induced protein (ERD15)	[more]
AT2G41430.4	2.7e-15	35.26	dehydration-induced protein (ERD15)	[more]
AT2G41430.2	2.7e-15	35.26	dehydration-induced protein (ERD15)	[more]
AT2G41430.5	2.7e-15	35.26	dehydration-induced protein (ERD15)	[more]
AT2G41430.3	8.0e-12	39.76	dehydration-induced protein (ERD15)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040414	PAM2-containing protein CID1/CID2	PANTHER	PTHR33790	OS05G0344200 PROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR33790:SF1	OS05G0344200 PROTEIN	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G002860.1	Lsi03G002860.1	mRNA