
Lsi03G002080 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCATATTACTTTTATTGGTTGTCGTCGGAGAACGTCCCATATTTGGTTTATGTTTGTGTGGTTAAGGGATGATTAAGGTGACATGTTAGTTTGTGTTCTTATGCAGGAAAAGGTGAGCAATATGATGGACAAGACAAGCGATGCAGCCCAATCAGCTAAAGAATCAGTGCAAGAAGCAGGACAACAGGTGAAAGCGAAGGCACAAGGGGCCGCTGATGCTGTCAAGGATGCAATTAACAAATAAAAATGTCTATCGATTTGCTCATTTTTTGAGATTTTTTTTTTCAAAGGTTCTCCTCAATTTTGTTTTTGCTTAGATTTTTTTTTTCTTTTCCC GTTTCATATTACTTTTATTGGTTGTCGTCGGAGAACGTCCCATATTTGGTTTATGAAAAGGTGAGCAATATGATGGACAAGACAAGCGATGCAGCCCAATCAGCTAAAGAATCAGTGCAAGAAGCAGGACAACAGGTGAAAGCGAAGGCACAAGGGGCCGCTGATGCTGTCAAGGATGCAATTAACAAATAAAAATGTCTATCGATTTGCTCATTTTTTGAGATTTTTTTTTTCAAAGGTTCTCCTCAATTTTGTTTTTGCTTAGATTTTTTTTTTCTTTTCCC GTTTCATATTACTTTTATTGGTTGTCGTCGGAGAACGTCCCATATTTGGTTTATGAAAAGGTGAGCAATATGATGGACAAGACAAGCGATGCAGCCCAATCAGCTAAAGAATCAGTGCAAGAAGCAGGACAACAGGTGAAAGCGAAGGCACAAGGGGCCGCTGATGCTGTCAAGGATGCAATTAACAAATAA VSYYFYWLSSENVPYLVYEKVSNMMDKTSDAAQSAKESVQEAGQQVKAKAQGAADAVKDAINK Homology
BLAST of Lsi03G002080 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.9e-10 Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of Lsi03G002080 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.2e-09 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Lsi03G002080 vs. ExPASy TrEMBL
Match: A0A6J1BXT9 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111006690 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-09 Identity = 39/45 (86.67%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of Lsi03G002080 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.9e-09 Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Lsi03G002080 vs. ExPASy TrEMBL
Match: A0A6J1BXE6 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111006564 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.9e-09 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of Lsi03G002080 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 76.6 bits (187), Expect = 8.3e-11 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Lsi03G002080 vs. NCBI nr
Match: XP_038891063.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 73.2 bits (178), Expect = 9.2e-10 Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of Lsi03G002080 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida]) HSP 1 Score: 72.4 bits (176), Expect = 1.6e-09 Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Lsi03G002080 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus]) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09 Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of Lsi03G002080 vs. NCBI nr
Match: XP_038891124.1 (late embryogenesis abundant protein 7-like [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09 Identity = 39/45 (86.67%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Lsi03G002080 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 53.9 bits (128), Expect = 5.4e-08 Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
BLAST of Lsi03G002080 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 53.9 bits (128), Expect = 5.4e-08 Identity = 27/41 (65.85%), Postives = 36/41 (87.80%), Query Frame = 0
BLAST of Lsi03G002080 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 50.8 bits (120), Expect = 4.6e-07 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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