Lsi03G000690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAATTGATTTAATATAAAAAAAATACACCTATTTTTTTTTTCCCTTCTTCTTTCAAATCGAAGATCCCAAGAAGCTTAAAGCATACTTTTAATGTTCACAACCAGAGAGCTCGGATCGCTCTCCAATGGCGCTTTCTCTATCCCTACAACTTATCCGATTCCCTCCTCAAGCATTATCTTCATCCTCTCACCATCTTCACATCTCTGACCTTGGCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGACTCCGTCGCGGAGCTGCACGATGACGTTATCTTCCAGAACGAAATGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGTGAACCGGAAGCGTTGGTGTCAGATGTGGACGGAGGGGGAGATCTTGAGGACGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGAGAGCAGGTTTATGAGGTCTGTTGCCTTGATGCATTTTGTTTTATTTTGTTTTTCTTTTTCACGTGAATTCGGACGTGTTTGCTGCTAGTTTGGGTGCTGGATTGAAGTAGGAAATTTGAACATCGAACCAAAAATTTCAATCAAACTAATAGTAAGATTTCCTCGCATTTGATGTTAGGTTGCAAATGGTTTAATATTAAAATTTTAAACAGTAGTAAGTGCTTCTAATCTTGTAGTAATTTAATGGTTTCTAAATTGATTTTTAAACATAAAAGACATTAGCAACATAGAAACTTTTTTTTAGTTCATGAATTCAAATCTCTAACCTATTGGTCGAAGAAATGAGGTAACTTTATGCTTTAACTAGTTGAACTATATTAGGTTGGTGATCATACACCAACATTTAATTAGTTAGAGGATATAAATCATATAAAATATGCATAGTATAAATTATAGCCCTATCAAAGAAATGATACAAAATTATGACTTTTGAGGGGTTCAACTCCAGGTATTCACTCTTCTTTGAGGTCACAATTTTTTAATTATTTTTTTGGATATGACTACAAATCCTGTTTGAAGGGCAGAATGTTTACAAAATTTCAGCTCAACAAATTCTGTTTGAAGGGCAGAATGTTTACAAAATTTCAGGTCAACAAATTCTTTTTGAAGGGCAGAATACTTACAAAATTTCAGCTTAATTTAAGACCTTGTGTTATAATCCTTCCACTGATTGGAGTTAATGGTTTGGAGCTAGTTATCGTTTTGATTCCTCAATCAAATCTTTTCCTGTTAGAGATATCTCTGCGGGTTTCTTTCTTAGATAAAGTTCTTACACTCAATGTTCATCTCTATTGACCACTTAGGTGTTAGAGGTTAAAGCTGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGTGAGTAAATATTACCAGAAATTTCAGCTTCTCATTTCAATGCGTAGTTTCTGGATGTATACCGTTGAAAACTTTTAGTCTGCATTGACTTGTGTATACTTTCTTTCGGAAATGTCGATTACTACTGGATGTCTCACGGTTGGTTTTTTGGATTCACCGATAGATAACCGTGGGATGACAAATAGTATGACTACATACTTGTTAACAAACTATATATTTTCCTCTTGTGGATATATATTTTTTTAATTATCAGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCGATGCCTACATTACTGGTATATTGATTTTCACCTTTTTAATTCCCGGTCATATTCTTTTATATTATAAGCTTTCTATGTTGAAGAATTAGCATTTGGGATAAACATATGAAATTAAGAAATTAAAGTCTATAAATGATACTCAGCAACAATTTTCTTTGTGGTTCACATCTCAGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGGTATCCATCTGACTTGAAAATGGTGCCATATTTATATCTCATACAAAATTTCGACATTGCAATTCCTTTTGCATGATGGTGATCATCTTCAGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTCGAGGTTAGTAATTCTTGTTTATATATGTATTTTTACATCATATAAATAGAGTTGGCAGATGAATGCAAAATTAGCTTACAGACTGCGATACTTCTGTACACCTAACAATAAGATGTTTCCCAATTGGAATTTGGTCCTTAGGAAGCTTACCCCTAGAAGCAATGAAAAATTACCACTAACTGCCTTTTAGCATTCTTATATCATTCTGCGAGTCCCAATGGAAATTGCTGAGAAGATCAGATAATTATTGTTAGCAGATAAGTGAGATCAACTTCTGCTCACAAAGATTTTCAAATTAAAATCTGACCTTGAGAGGTCAATGAAGGTTCCTACCAATTCTGAAACTTACATCGAATATTTTCTATGATGGAGGCCAGACAACCAAATACTATTAAATAACCGTTGAGGGGAAGTCCAAATAGGTAGTGAGCCATTTCTCATTGTCTGCTATGAAGGCTAAACTTTTGCACTTCCAGATCATCTCTCGGCTAATAATCTGTCTCCGATTATTGTTTAGACCTGAGAAAGGCTATAAACGCTTGGTGATATTGAACGGATTAACAAACTCATCTTCAAGAGCAATGGAGAAAAGAATAGTACAAAACTTAATACAGAACCATTGGTCTAACCTTGGTTTTCCATAAGCAATAATGGTCTTTTAATCTTCTGGTGGCTTCTCCAGTTCCACGATAGCATTTACAAAATTTAAATCAACTATAACAAAGGCCTTTTATAGATCCAGTTTGACATATGCACCCTTCTTCCTTTTTCAAACATCACCGAATTCTGGACAAGAATCAATAATTTGTTTTCACCCGAAAAAGCCATTTGATGTTCTTTAATTGTGTATCAAATAATCCTTTAGATATTTTAATAAAAACTTAGTGGGTAAAACCATTAAGTTTGAACTTGTTAAGTCACTAGTTGACCCAAAAACTTAAGTTGATGTGTGAAGGTAAATGTAATATTATATCAAAACTTTAACACTCTCCTTTACTTGTGAGCTTGAAAATTTGTAGAAGACCCAATAAGTGGAAATCAATATTAACTGGGGAGGAAATAACATTGTAAGGTTTTGAACACAGGACCTCTTGCTCTGATACAACGTTAAATCACCAATTGATCCAAAAGCTTAAGCTAATGGGTGAAGGTAAATTTGATATTATATAATACTTTAACGGAACTCAATTACCTTTTTTGCATTACACTTCATTAGAATAAGGTGTACATCTCATTAATGCTCATTGCTCATGTGAGTAATGTCATTTTAGAAAAGTCCATGGAACAATTTCATAACTTATGCAGAAGAATGTTCGACCTTTTCTGAAGAACACTGCTGTTAAATGGTCTAGCCTAGGGGCCTTGCACATACAAACTTCGCATATCTTTCAAGATCTTGCCGTAGTAAAACTGATTCCCATGCCTTCCTTTAGTGATCAGAAAGAGGATTCAAATCAAGATTAG TGGAAATTGATTTAATATAAAAAAAATACACCTATTTTTTTTTTCCCTTCTTCTTTCAAATCGAAGATCCCAAGAAGCTTAAAGCATACTTTTAATGTTCACAACCAGAGAGCTCGGATCGCTCTCCAATGGCGCTTTCTCTATCCCTACAACTTATCCGATTCCCTCCTCAAGCATTATCTTCATCCTCTCACCATCTTCACATCTCTGACCTTGGCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGACTCCGTCGCGGAGCTGCACGATGACGTTATCTTCCAGAACGAAATGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGTGAACCGGAAGCGTTGGTGTCAGATGTGGACGGAGGGGGAGATCTTGAGGACGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGCTGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGTCTGCATTGACTTGTGTATACTTTCTTTCGGAAATGTCGATTACTACTGGATGTCTCACGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCGATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTCGAGAAGAATGTTCGACCTTTTCTGAAGAACACTGCTGTTAAATGGTCTAGCCTAGGGGCCTTGCACATACAAACTTCGCATATCTTTCAAGATCTTGCCGTAGTAAAACTGATTCCCATGCCTTCCTTTAGTGATCAGAAAGAGGATTCAAATCAAGATTAG ATGGCGCTTTCTCTATCCCTACAACTTATCCGATTCCCTCCTCAAGCATTATCTTCATCCTCTCACCATCTTCACATCTCTGACCTTGGCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGACTCCGTCGCGGAGCTGCACGATGACGTTATCTTCCAGAACGAAATGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGTGAACCGGAAGCGTTGGTGTCAGATGTGGACGGAGGGGGAGATCTTGAGGACGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGCTGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGTCTGCATTGACTTGTGTATACTTTCTTTCGGAAATGTCGATTACTACTGGATGTCTCACGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCGATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTCGAGAAGAATGTTCGACCTTTTCTGAAGAACACTGCTGTTAAATGGTCTAGCCTAGGGGCCTTGCACATACAAACTTCGCATATCTTTCAAGATCTTGCCGTAGTAAAACTGATTCCCATGCCTTCCTTTAGTGATCAGAAAGAGGATTCAAATCAAGATTAG MALSLSLQLIRFPPQALSSSSHHLHISDLGSVSRFFRSPCLSSLTPSRSCTMTLSSRTKCFSMSTEEEQWSEPEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQRISSSSPSDYLSLAIREQVYEVLEVKADGTVSTRKVNRRQLLKSSVCIDLCILSFGNVDYYWMSHGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEKNVRPFLKNTAVKWSSLGALHIQTSHIFQDLAVVKLIPMPSFSDQKEDSNQD Homology
BLAST of Lsi03G000690 vs. ExPASy Swiss-Prot
Match: Q058N4 (Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRS2-11 PE=1 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 5.4e-50 Identity = 132/239 (55.23%), Postives = 155/239 (64.85%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy Swiss-Prot
Match: B8APK3 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-A PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.2e-42 Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy Swiss-Prot
Match: Q9AUK4 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-A PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.2e-42 Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy Swiss-Prot
Match: Q7SFQ9 (Mitochondrial inner membrane magnesium transporter mrs2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrs2 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy Swiss-Prot
Match: Q4WCV3 (Mitochondrial inner membrane magnesium transporter mrs2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=mrs2 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06 Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy TrEMBL
Match: A0A5A7U838 (Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00610 PE=3 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106 Identity = 219/258 (84.88%), Postives = 224/258 (86.82%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy TrEMBL
Match: A0A1S3CI47 (Magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103500679 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 7.3e-106 Identity = 218/258 (84.50%), Postives = 223/258 (86.43%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy TrEMBL
Match: A0A6J1HIJ3 (magnesium transporter MRS2-11, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464721 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 3.0e-99 Identity = 207/255 (81.18%), Postives = 217/255 (85.10%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy TrEMBL
Match: A0A6J1HK11 (Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111464814 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 3.0e-99 Identity = 207/255 (81.18%), Postives = 217/255 (85.10%), Query Frame = 0
BLAST of Lsi03G000690 vs. ExPASy TrEMBL
Match: A0A6J1I3J1 (magnesium transporter MRS2-11, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469313 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 8.0e-97 Identity = 203/255 (79.61%), Postives = 214/255 (83.92%), Query Frame = 0
BLAST of Lsi03G000690 vs. NCBI nr
Match: XP_038894956.1 (magnesium transporter MRS2-11, chloroplastic isoform X1 [Benincasa hispida] >XP_038894958.1 magnesium transporter MRS2-11, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-112 Identity = 226/255 (88.63%), Postives = 232/255 (90.98%), Query Frame = 0
BLAST of Lsi03G000690 vs. NCBI nr
Match: XP_038894959.1 (magnesium transporter MRS2-11, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 409.1 bits (1050), Expect = 3.4e-110 Identity = 224/255 (87.84%), Postives = 228/255 (89.41%), Query Frame = 0
BLAST of Lsi03G000690 vs. NCBI nr
Match: KAA0052093.1 (magnesium transporter MRS2-11 [Cucumis melo var. makuwa] >TYK00707.1 magnesium transporter MRS2-11 [Cucumis melo var. makuwa]) HSP 1 Score: 396.4 bits (1017), Expect = 2.3e-106 Identity = 219/258 (84.88%), Postives = 224/258 (86.82%), Query Frame = 0
BLAST of Lsi03G000690 vs. NCBI nr
Match: XP_008462287.1 (PREDICTED: LOW QUALITY PROTEIN: magnesium transporter MRS2-11, chloroplastic [Cucumis melo]) HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-105 Identity = 218/258 (84.50%), Postives = 223/258 (86.43%), Query Frame = 0
BLAST of Lsi03G000690 vs. NCBI nr
Match: XP_022964826.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 371.7 bits (953), Expect = 6.1e-99 Identity = 207/255 (81.18%), Postives = 217/255 (85.10%), Query Frame = 0
BLAST of Lsi03G000690 vs. TAIR 10
Match: AT5G22830.1 (magnesium (Mg) transporter 10 ) HSP 1 Score: 199.5 bits (506), Expect = 3.9e-51 Identity = 132/239 (55.23%), Postives = 155/239 (64.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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