Lsi02G028800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G028800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	25.3 kDa vesicle transport protein
Location	chr02: 35002309 .. 35005502 (+)
RNA-Seq Expression	Lsi02G028800
Synteny	Lsi02G028800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGGGACATATCGAACTAAAGATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTATACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCTTCAAGAATGTCTATTGAGACAGGCCCATATGTTTTTCAGTATCCATACGTGATTGACCTTAACTTATAGTGTTCGATGGCAGGCTAGTTTTTTGTATTTTGAATTTTTGTATCTGCATGTCCATGCTGCTATGATGTATATTTTACTAAATAAATTAATTAGTAGCTTTTCTGTTTGCTCCTAGTCATTACACCCAATCTGATTTGTTGTGGGTTGCAAGAGACTGACATGGAATATGGTTATCCCCATTTATGTTTGTTTCTTGTTGTGGAAAGGAAGTCGTGACCCTGTGGCCTGGACAAACTAGTTTTATCCTGACAATTTGATGGTAGCTTGCTGAAAAAGTTTTGGTTTCAAACAAAGGCGGTTGATGTTGAATATGAAAACTTATTTGATTTTACTATTTCTTGAGTTCAATGTGTAGAGGATTCATCATATAAATGTGTCTTATGAAGTATTTGAGAATTATGGTTCATCGATTTAAATTGTCTACAAGATTGTTAGCTCAAGTTATGCTCTTGACAGCCGTCATTTTACCTTGACCTAAGTTTTTAGCTATATAATTGAAGGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAGAAACTTGCCTTTCAATATCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGGTATGCATTACTTGGCTTTATATAAATAATTCATATGCACTTTGAACCTCTTAGCTTTATTTTACTTTCCTTTTGCTTTATTTGAAACCTTGTTTCCCACCTCCACTTCCTTTTTGTTCAACAGATACGTACATACAGAAGACCAAGAAATTGTACCAGGATACACGCACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTATGAAGTCCATCAGATAATGACTCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGACCGTAAGATATTTCCTTTTCCTTTTATCTTCTAATTTGTTCAAGTGTGGCTATGTATTATCCTATAGTAAAATGATGTGATAAAGCATTATGGATCCTTTGTTTTCTGTTGATGTGAGTGGTTCAACTATCATTACAAACTAAATCATATTGTTCCCGGTTCCTAGGTGTGTGAGGATCTTTGTTATTTGTTATGTTTAGCATGGATTATATTAATTTATGTTGGGAGAGATAAATATAATTGCGGCTTTCTTGAAGGGGTTTGCAGAATCATGATTCAGCAGTGTCAAAGATGATCAGTTTTTTATTTTAAACTATTAAAATTTTGCAGAGGTCAGTCAAATGTCAAGTAGGTTGACGTCAGAATCCCGCATATATGCCGACAAGGCGAAAGATTTGAACCGGCAGGTTAGTGTCATTTTATTGCTTGATGTGTGCTTTCAATTCTGTCGAAGTTGAATGTTTGCCTCAAAACATGTGGACTTTGAATGAAAATAATCTTTTGCCAATGGTTTAATGTATCATCATCAAGTAAACCTTTTGCATGCTTTTGATGTTGCTCATGAAGGTTGATACTGGTTTGATAATTGTCTAGGAAATAAGAAACAAGGAATACCATCAAACTAAAAAGAGAATACAGCTTAAAAGCCAGAGGGAAAAAGGAATCCCTTGCCTAGGAGGCTAGAAAAAAATCCCCTCCAGTCTAAACTGATCAAAATGCTGCTGTAGTTATGAAAATCCTTACGTGAGGCACTTCAAGTGGAAGCCGTTTGCTGTACATTTAGCCAAAAACCATGAAAACTTTAACAAACATCATTAAAAATCCCATTGTTCTTCTCTAACCAAATGGAGCAAAAACTGGGTATGCTTTTTTGACAATCTTCTAGCTTTGCCTTTAAGCCACCCTCTCGAAAGCAGCTTTGTGAGCCAGTCTGCCACATCATCTTGGTTCTTGGAAACAGTAGTTGAGCCTAAAAATCTTACAGAGGAAGAGATTTCGTTTTTGAATTCTATTTGGAGTGTTAGGCATCTCAGATCAAATGTGAAACTCAACTTTTTTTTTTTTTTTTTTTTGGCAAATTTACCCTCCTAATTGAGCTTCGACAATGGGATGGAGAGGTTGGTGGCCTGGCCTTGGACTTGAACTTGAAATTAGCTGCTTTACTAGAAAAGACGCCAATTCTTTCAAGATTCCAAACCTTTCTATCACTTCCAATTCCTTAACTTATGGGACGAAGCTTGATGGAGTTTATTCCTAAACTTTCAATTCCGTATGAAGTTTATTCCATGCAAATATGCATATAAGAAACAAAGAACCCATATTCTATTTCTCTGGGGGCCTTATAATCTGACCTTTGGTGGTTGAAATGAGTATAGTTACTGAAAATGCACTTGGAAGACATTTAAATTGAAATAAACAAATAAATATCAATGATTTATTCTGTTGTGAGATCCAGAATACAGACCGGCATTTTTATCAGAAATTTAAATGTGCCTAAAGTTGTGAGTAGTTGTGCAATGTGGTTGAAGAAAATACAAGCACAAGACATTGTAGGTCATCACTCTTAGTCTTATCCTTGCTGATTTTTCAAATTTCATAAGTATTTGGACTGTAATCCAAAATTGTGCATGATTTGTTGTAAACTGATCTCATAAACATTGTCAATATCTCATAGGATGCTTTCTACAAGTTGCGTCATTGGAAAGCTTGTGACCTCATTTTCAAGTGAACTTGTGTTTTTTAATTGACAGACCAAAGAAATTACTTAATTTCTTTTCTTTCTTAAAAATTTTGAACTCAGGCTTTAATTCGGAAGTGGGCCCCTGTTGCTATCGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGGTAATTCAGTTTCTGTTCCAGTTAATCTTTTAACTCATTTTCAGGCTTCTCTTTGCTTTTAGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAGAGGTGACTTCTAGATTTTACTTAATGGCTAAGATGGGATCAGAAAAA

mRNA sequence

TTGGGGGACATATCGAACTAAAGATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTATACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCTTCAAGAATGTCTATTGAGACAGGCCCATATGTTTTTCAGTATCCATACCTTTTCTGTTTGCTCCTAGTCATTACACCCAATCTGATTTGTTGTGGGTTGCAAGAGACTGACATGGAATATGGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAGAAACTTGCCTTTCAATATCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGATACGTACATACAGAAGACCAAGAAATTGTACCAGGATACACGCACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTATGAAGTCCATCAGATAATGACTCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACGTCAGAATCCCGCATATATGCCGACAAGGCGAAAGATTTGAACCGGCAGGATGCTTTCTACAAGTTGCGTCATTGGAAAGCTTGTGACCTCATTTTCAAACCAAAGAAATTACTTAATTTCTTTTCTTTCTTAAAAATTTTGAACTCAGGCTTTAATTCGGAAGTGGGCCCCTGTTGCTATCGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAGAGGTGACTTCTAGATTTTACTTAATGGCTAAGATGGGATCAGAAAAA

Coding sequence (CDS)

ATGGTGAAGCTTACAATGATTGCTCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTATACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCAAGAGGTCAAAATGAGGCTTCAAGAATGTCTATTGAGACAGGCCCATATGTTTTTCAGTATCCATACCTTTTCTGTTTGCTCCTAGTCATTACACCCAATCTGATTTGTTGTGGGTTGCAAGAGACTGACATGGAATATGGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAGAAACTTGCCTTTCAATATCTTGAAGACCTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGATACGTACATACAGAAGACCAAGAAATTGTACCAGGATACACGCACTCAACGTAATATTGCAAAGTTGAATGATGAACTTTATGAAGTCCATCAGATAATGACTCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACGTCAGAATCCCGCATATATGCCGACAAGGCGAAAGATTTGAACCGGCAGGATGCTTTCTACAAGTTGCGTCATTGGAAAGCTTGTGACCTCATTTTCAAACCAAAGAAATTACTTAATTTCTTTTCTTTCTTAAAAATTTTGAACTCAGGCTTTAATTCGGAAGTGGGCCCCTGTTGCTATCGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAGAGGTGACTTCTAGATTTTACTTAATGGCTAAGATGGGATCAGAAAAA

Protein sequence

MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPYVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFSFLKILNSGFNSEVGPCCYRVWSCIPPILVQIKDLLWLNGFRYQRLETGLEVTSRFYLMAKMGSEK

Homology

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BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 8.8e-93
Identity = 176/230 (76.52%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVK+T+IARVTDGLPLAEGLDDGRD+ D+++YKQQVKALFKNLSRGQN+ASRMS+ETGPY
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VF Y                       +  GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFHY-----------------------IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNG  IETAARPYAFIKFDT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIF 231
           LGVGEKLDQVS+MSSRLTSESRIYADKAKDLNRQ     +R W    ++F
Sbjct: 181 LGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQAL---IRKWAPVAIVF 204

[Close]

BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-41
Identity = 95/221 (42.99%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGL-DDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGP 60
           MV LTMIARV DGLPLA  + +D +  +D + Y+ Q K LF+ L+  +   +R ++E G 
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGA 60

Query: 61  YVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEF 120
             F Y                       +E G VCYL +C+ A+PKKLAF YLEDL++EF
Sbjct: 61  MAFHY----------------------IIEKG-VCYLVLCEAAFPKKLAFAYLEDLQSEF 120

Query: 121 ERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQE 180
           +  +G ++ T +RPY+FI+FDTYIQKTKKLY D+R +RN+  +N EL +V +IM  N++E
Sbjct: 121 DEQHGKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEE 180

Query: 181 VLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKL 221
           VL  GE L  +   ++ L+S S+ Y   AK LN +  + KL
Sbjct: 181 VLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKL 196

[Close]

BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40
Identity = 94/221 (42.53%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGL-DDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGP 60
           MV LTMIARV DGLPLA  + +D +  +D + Y+ Q K LF+ L+  +   +R ++E G 
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGA 60

Query: 61  YVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEF 120
             F Y                       +E G VCYL +C+ A+PKKLAF YLEDL +EF
Sbjct: 61  MTFHY----------------------IIEQG-VCYLVLCEAAFPKKLAFAYLEDLHSEF 120

Query: 121 ERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQE 180
           +  +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+  +N EL +V +IM  N++E
Sbjct: 121 DEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEE 180

Query: 181 VLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKL 221
           VL  GE L  +   ++ L+S S+ Y   AK LN +  + KL
Sbjct: 181 VLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKL 196

[Close]

BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot
Match: Q5RAI9 (Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40
Identity = 94/221 (42.53%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGL-DDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGP 60
           MV LTMIARV DGLPLA  + +D +  +D + Y+ Q K LF+ L+  +   +R ++E G 
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGA 60

Query: 61  YVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEF 120
             F Y                       +E G VCYL +C+ A+PKKLAF YLEDL +EF
Sbjct: 61  MTFHY----------------------IIEQG-VCYLVLCEAAFPKKLAFAYLEDLHSEF 120

Query: 121 ERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQE 180
           +  +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+  +N EL +V +IM  N++E
Sbjct: 121 DEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEE 180

Query: 181 VLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKL 221
           VL  GE L  +   ++ L+S S+ Y   AK LN +  + KL
Sbjct: 181 VLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKL 196

[Close]

BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot
Match: Q4KM74 (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40
Identity = 94/221 (42.53%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGL-DDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGP 60
           MV LTMIARV DGLPLA  + +D +  +D + Y+ Q K LF+ L+  +   +R ++E G 
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGA 60

Query: 61  YVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEF 120
             F Y                       +E G VCYL +C+ A+PKKLAF YLEDL +EF
Sbjct: 61  MTFHY----------------------IIEQG-VCYLVLCEAAFPKKLAFAYLEDLHSEF 120

Query: 121 ERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQE 180
           +  +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+  +N EL +V +IM  N++E
Sbjct: 121 DEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEE 180

Query: 181 VLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKL 221
           VL  GE L  +   ++ L+S S+ Y   AK LN +  + KL
Sbjct: 181 VLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKL 196

[Close]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL
Match: A0A7J9F2B2 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_003565 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 7.0e-101
Identity = 199/272 (73.16%), Postives = 217/272 (79.78%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C +    +E GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CPVHSYIIE-GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 238

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
             K+L  GFNSEVG  C+RV SC+PP+L + K
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSCVPPLLGESK 238

[Close]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL
Match: A0A7J9HR89 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_026199 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 7.0e-101
Identity = 199/272 (73.16%), Postives = 217/272 (79.78%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C +    +E GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CPVHSYIIE-GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 238

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
             K+L  GFNSEVG  C+RV SC+PP+L + K
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSCVPPLLGESK 238

[Close]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL
Match: A0A2P5YJL3 ((S)-2-hydroxy-acid oxidase OS=Gossypium barbadense OX=3634 GN=GOBAR_AA04765 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.0e-99
Identity = 204/300 (68.00%), Postives = 226/300 (75.33%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C         GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CP--------GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 240

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIKDLLWLNGFRYQRLETGLEVTSRFYLMAK 300
             K+L  GFNSEVG  C+RV S +PP+L + K +L ++    QR  TG  +     +MA+
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSRVPPLLGESKAVLVVH---TQRPNTGQNIIYVSRIMAE 256

[Close]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL
Match: A0A0D2TPX9 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G145000 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 9.4e-98
Identity = 194/272 (71.32%), Postives = 210/272 (77.21%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVK+TMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMSIETGPY
Sbjct: 1   MVKMTMIARVTDGLPLAEGLDDGRDLVDAEMYKQQVKALFKNLSKGHNEASRMSIETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VF Y                       +  GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFHY-----------------------IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                        F 
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQ------------------------FV 225

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
              +L+ GF+S+VG CC+ V SC+PP+L + K
Sbjct: 241 ICFLLHVGFDSKVGSCCHCVGSCVPPLLGESK 225

[Close]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL
Match: F6HXQ6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g00780 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.4e-96
Identity = 192/275 (69.82%), Postives = 207/275 (75.27%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLT+IARVTDGLPLAEGLDDGRD++DAE YKQQVKALFKNLS+GQNE SRMSIETGPY
Sbjct: 1   MVKLTLIARVTDGLPLAEGLDDGRDLKDAEFYKQQVKALFKNLSKGQNEPSRMSIETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           +F Y                       +  GRVCYLTMCDRAYPKKLAFQYLEDLKNEFE
Sbjct: 61  IFHY-----------------------IIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNG QIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGNQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                          
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQ-------------------------- 222

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIKDLL 276
                 +GF+SE+G CC   WS +PP+L Q +DL+
Sbjct: 241 ----AKAGFDSEMGSCCNSAWSRLPPLLDQKEDLV 222

[Close]

BLAST of Lsi02G028800 vs. NCBI nr
Match: MBA0779298.1 (hypothetical protein [Gossypium trilobum])

HSP 1 Score: 377.1 bits (967), Expect = 1.4e-100
Identity = 199/272 (73.16%), Postives = 217/272 (79.78%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C +    +E GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CPVHSYIIE-GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 238

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
             K+L  GFNSEVG  C+RV SC+PP+L + K
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSCVPPLLGESK 238

[Close]

BLAST of Lsi02G028800 vs. NCBI nr
Match: MBA0812213.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 377.1 bits (967), Expect = 1.4e-100
Identity = 199/272 (73.16%), Postives = 217/272 (79.78%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C +    +E GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CPVHSYIIE-GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 238

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
             K+L  GFNSEVG  C+RV SC+PP+L + K
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSCVPPLLGESK 238

[Close]

BLAST of Lsi02G028800 vs. NCBI nr
Match: PPS15790.1 (hypothetical protein GOBAR_AA04765 [Gossypium barbadense])

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-98
Identity = 204/300 (68.00%), Postives = 226/300 (75.33%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMS+ETGPY
Sbjct: 1   MVKLTMIARVTDGLPLAEGLDDGRDLTDAEMYKQQVKALFKNLSKGHNEASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VFQYP               C         GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFQYP---------------CP--------GRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                    +++   
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQII------------------IVSNSE 240

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIKDLLWLNGFRYQRLETGLEVTSRFYLMAK 300
             K+L  GFNSEVG  C+RV S +PP+L + K +L ++    QR  TG  +     +MA+
Sbjct: 241 VWKLLPVGFNSEVGSGCHRVRSRVPPLLGESKAVLVVH---TQRPNTGQNIIYVSRIMAE 256

[Close]

BLAST of Lsi02G028800 vs. NCBI nr
Match: KJB56926.1 (hypothetical protein B456_009G145000 [Gossypium raimondii])

HSP 1 Score: 366.7 bits (940), Expect = 1.9e-97
Identity = 194/272 (71.32%), Postives = 210/272 (77.21%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVK+TMIARVTDGLPLAEGLDDGRD+ DAE+YKQQVKALFKNLS+G NEASRMSIETGPY
Sbjct: 1   MVKMTMIARVTDGLPLAEGLDDGRDLVDAEMYKQQVKALFKNLSKGHNEASRMSIETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VF Y                       +  GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFHY-----------------------IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNGAQIETAARPYAFIKFDT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVSQMSSRLTSESRIYADKA+DLNRQ                        F 
Sbjct: 181 LGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQ------------------------FV 225

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIK 273
              +L+ GF+S+VG CC+ V SC+PP+L + K
Sbjct: 241 ICFLLHVGFDSKVGSCCHCVGSCVPPLLGESK 225

[Close]

BLAST of Lsi02G028800 vs. NCBI nr
Match: KAF7123813.1 (hypothetical protein RHSIM_Rhsim12G0211700 [Rhododendron simsii])

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-97
Identity = 193/275 (70.18%), Postives = 215/275 (78.18%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVKLTMIARVTDGLPLAEGLDDGRD+QDAE YKQQVKALFKNLSRGQNE SRMSIETGPY
Sbjct: 89  MVKLTMIARVTDGLPLAEGLDDGRDLQDAEFYKQQVKALFKNLSRGQNEPSRMSIETGPY 148

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           +F Y                       +  GRVCYLTMCDRAYPKKLAFQYLEDLKNEFE
Sbjct: 149 IFHY-----------------------VIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 208

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNG+QIETAARPYAFIKFDT+IQKT+KLY DTRTQRNI+KLNDELYEVHQIMTRNVQEV
Sbjct: 209 RVNGSQIETAARPYAFIKFDTFIQKTRKLYLDTRTQRNISKLNDELYEVHQIMTRNVQEV 268

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIFKPKKLLNFFS 240
           LGVGEKLDQVS+MSSRLTSESRIYADKAKDLNRQ    ++      +++ +P +      
Sbjct: 269 LGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQIIGRRIDR----NILDQPFEC----- 323

Query: 241 FLKILNSGFNSEVGPCCYRVWSCIPPILVQIKDLL 276
                   F+SEVGPCCY  WSC+P +L + ++L+
Sbjct: 329 --------FDSEVGPCCYCAWSCLPSLLDEKQNLV 323

[Close]

BLAST of Lsi02G028800 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein )

HSP 1 Score: 341.7 bits (875), Expect = 6.3e-94
Identity = 176/230 (76.52%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLDDGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETGPY 60
           MVK+T+IARVTDGLPLAEGLDDGRD+ D+++YKQQVKALFKNLSRGQN+ASRMS+ETGPY
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY 60

Query: 61  VFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNEFE 120
           VF Y                       +  GRVCYLTMCDR+YPKKLAFQYLEDLKNEFE
Sbjct: 61  VFHY-----------------------IIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFE 120

Query: 121 RVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180
           RVNG  IETAARPYAFIKFDT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV
Sbjct: 121 RVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV 180

Query: 181 LGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQDAFYKLRHWKACDLIF 231
           LGVGEKLDQVS+MSSRLTSESRIYADKAKDLNRQ     +R W    ++F
Sbjct: 181 LGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQAL---IRKWAPVAIVF 204

[Close]

BLAST of Lsi02G028800 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 7.8e-20
Identity = 57/184 (30.98%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 1   MVKLTMIARVTDGLPLAEGLD--DGRDMQDAELYKQQVKALFKNLSRGQNEASRMSIETG 60
           MVKLT++ RV DGLPLA+     +  D     LYKQQ + L K +S+      +M+I   
Sbjct: 1   MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD 60

Query: 61  PYVFQYPYLFCLLLVITPNLICCGLQETDMEYGRVCYLTMCDRAYPKKLAFQYLEDLKNE 120
            + F +                       +   ++CY+ + D +YP+KL F YL++L  E
Sbjct: 61  HHSFHF-----------------------LVEKKICYIALSDSSYPRKLLFNYLQNLNKE 120

Query: 121 FERVN-GAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNV 180
            ++++  A I+  ++PY+FI+F   I + +K Y DTRTQ N++KLN    +   ++T ++
Sbjct: 121 LDKLDEKALIQKISKPYSFIRFGKIIGRIRKQYIDTRTQANLSKLNALRKQELDVVTEHL 161

Query: 181 QEVL 182
            +++
Sbjct: 181 NDII 161

[Close]

BLAST of Lsi02G028800 vs. TAIR 10
Match: AT5G58060.1 (SNARE-like superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 33/124 (26.61%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 93  VCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG----AQIETAARPYAFIKFDTYIQKTKK 152
           +C +   D  YP + AF  L  + +E+++  G    +  E + +P+       Y+ +   
Sbjct: 76  LCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQPW------PYLTEALN 135

Query: 153 LYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKA 212
            +QD      + K+  EL E   I+ + +  VL  GEKLD + + SS L+  S+++  +A
Sbjct: 136 KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSMASQMFYKQA 193

[Close]

BLAST of Lsi02G028800 vs. TAIR 10
Match: AT5G58180.1 (Synaptobrevin family protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 31/122 (25.41%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 93  VCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGA--QIETAARPYAFIKFDTYIQKTKKLY 152
           +C +   D  YP + AF  L  + + +++  G   + E +++P+       Y+++    +
Sbjct: 78  LCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRFENSSQPW------PYLKEASDKF 137

Query: 153 QDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKAKD 212
           +D      + K+  EL E   I+ + +  VL  GEKLD + + SS L+  S+++  +AK 
Sbjct: 138 RDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSELSLASKMFYKQAKK 193

[Close]

BLAST of Lsi02G028800 vs. TAIR 10
Match: AT5G58060.2 (SNARE-like superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 33/124 (26.61%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 93  VCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG----AQIETAARPYAFIKFDTYIQKTKK 152
           +C +   D  YP + AF  L  + +E+++  G    +  E + +P+       Y+ +   
Sbjct: 98  LCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQPW------PYLTEALN 157

Query: 153 LYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKA 212
            +QD      + K+  EL E   I+ + +  VL  GEKLD + + SS L+  S+++  +A
Sbjct: 158 KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSMASQMFYKQA 215

The following BLAST results are available for this feature:

BLAST of Lsi02G028800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU2	8.8e-93	76.52	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2...	[more]
Q5ZJW4	2.7e-41	42.99	Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1	[more]
O08547	1.0e-40	42.53	Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3	[more]
Q5RAI9	1.0e-40	42.53	Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3	[more]
Q4KM74	1.0e-40	42.53	Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 ...	[more]

BLAST of Lsi02G028800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J9F2B2	7.0e-101	73.16	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_003565 PE=3 SV=1	[more]
A0A7J9HR89	7.0e-101	73.16	Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_026199 PE=3 SV...	[more]
A0A2P5YJL3	5.0e-99	68.00	(S)-2-hydroxy-acid oxidase OS=Gossypium barbadense OX=3634 GN=GOBAR_AA04765 PE=3...	[more]
A0A0D2TPX9	9.4e-98	71.32	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G145000 PE=3 ...	[more]
F6HXQ6	1.4e-96	69.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g00780 PE=3 SV=...	[more]

BLAST of Lsi02G028800 vs. NCBI nr


Match Name	E-value	Identity	Description
MBA0779298.1	1.4e-100	73.16	hypothetical protein [Gossypium trilobum]	[more]
MBA0812213.1	1.4e-100	73.16	hypothetical protein [Gossypium harknessii]	[more]
PPS15790.1	1.0e-98	68.00	hypothetical protein GOBAR_AA04765 [Gossypium barbadense]	[more]
KJB56926.1	1.9e-97	71.32	hypothetical protein B456_009G145000 [Gossypium raimondii]	[more]
KAF7123813.1	3.3e-97	70.18	hypothetical protein RHSIM_Rhsim12G0211700 [Rhododendron simsii]	[more]

BLAST of Lsi02G028800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11890.1	6.3e-94	76.52	Synaptobrevin family protein	[more]
AT5G52270.1	7.8e-20	30.98	SNARE-like superfamily protein	[more]
AT5G58060.1	1.4e-05	26.61	SNARE-like superfamily protein	[more]
AT5G58180.1	1.4e-05	25.41	Synaptobrevin family protein	[more]
AT5G58060.2	1.4e-05	26.61	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 35..142 e-value: 9.0E-23 score: 91.7
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 37..141 e-value: 4.9E-18 score: 64.9
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 6..143 score: 24.271173
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 5..150 e-value: 4.45908E-32 score: 113.89
None	No IPR available	GENE3D	1.20.5.110		coord: 151..213 e-value: 7.6E-11 score: 43.9
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..150 e-value: 2.4E-43 score: 149.2
None	No IPR available	PANTHER	PTHR45837:SF10	BNAA09G47480D PROTEIN	coord: 91..216
None	No IPR available	PANTHER	PTHR45837:SF10	BNAA09G47480D PROTEIN	coord: 1..64
None	No IPR available	CDD	cd15866	R-SNARE_SEC22	coord: 156..219 e-value: 4.07219E-29 score: 104.139
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 153..214
IPR001388	Synaptobrevin	PFAM	PF00957	Synaptobrevin	coord: 156..222 e-value: 2.2E-13 score: 49.8
IPR044565	Vesicle-trafficking protein Sec22	PANTHER	PTHR45837	VESICLE-TRAFFICKING PROTEIN SEC22B	coord: 1..64 coord: 91..216
IPR042855	v-SNARE, coiled-coil homology domain	PROSITE	PS50892	V_SNARE	coord: 158..218 score: 13.570942
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G028800.1	Lsi02G028800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0009853	photorespiration
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005484	SNAP receptor activity