
Lsi02G024260 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTTGTTTTGAATTTTTGGAAGATCAAAAGCCATATATATATATGCCTTGGTTTTGATAAATGGGAAAATTATATATAGAAAATTCTAACAGGTTTTGATTCTGTTCAATTAGTAGGACAACCAAATTATATATGATGGCTATGATTAATTGATCGTTTGGTTATTTTTGCTTACCCTAATGAGTTGTTTTGAAACAATAAAAGTCGGAAAATTTTCTAATATTGGGTTATACGTACACACATTGAAAATATGAATTATAAAAAGTTAATGCCAAAGGTCAAAAAATAATGATATTTTGTGTGGAGTGAGTAAAAAAAAAAATGTGGTTTGAAAATATAAAATATAAAACAAAGAAAGTAAAGATATGAGAGTGGTATTTATACGCTTAATTTAATATTATACACTTAATTTTCAAAAATGTCAAATTAATATTAAATTTACCTTTAGCCATAAGCTTAAGTTTTTTTGATAGTGATTAAAGATATGGTATTAGAATAAGTGGTCTAGGAGATTTTGTGTTCAAACTACTATGCAATGTTGATATAATATTAATTTACCTTCACCCATAAGTTCAAGCTTTTGAGTCAATTAATGATTTCTTATAAGCGAATCAAATTACATACATTTTGAAGAAGTCTACACACGTGGTATGTTTTATTTATATCTTTAGACTTTGAACATTTTATTTTTTAAATTTTGACATCTTTTTTGGTTAAAAAGTTTTAAATTGACACAATAATTGATGTCGAAAAATTGAAAGATAAATGTGACATCATTTACATATATTAAAGTGATAGTTGGTGGGCAAAAATTGATTAGTAAATAGTTTTAATGATATTGTTGAGATTGGAAATAAATACAACAATAACTTTAATCTCATATAAAAGTGTAAAGGTAAAAAATGAAACTTTTCAAAATCTAAATGCATTAGGGAAACTCACCCAAAAGTTTATGAGTATTTTCCATGATTAACCTATAATTTATTTAGTAAAAACCTTATATTGGGCACTTATTTTGTTGTTATGTAATCTGGAAAGGTTTAAGTAGGCATAACTAATTAGTTAGAATTTTCTTAATATAGTTTTCCCATCTAACAATGCAATATATATAGAGCTTTTTAACATTAAAAATTTCCAAACACACCCACACCATTGGCATTTCTACTCATCATCATCTGTTAAACCAGCTTGTGGCTTGCAACCTTAAGACAATTAAACCATGTCAATAGCAAAAGGCTTTAAGCTCTTCCAAACTCTTTCCTTGGTGTTTGCTTGGCATTGTTGTGCAAAGGTGAGTGCCACTTTCAACGATGCCACCGGTGTCGTAGATCACGGCCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGAAACCTCAAATGCCGGTAATAGCATCGCATCAACTGTAAACAATCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAATCGACAAACAGGACAAGGTTTCATCTTTTGGTCACGAAATTATTAAAAAGATCGATGCTTCTAATGATAATGAAATTAATTTGAAGAGTGGTGGCAACATTGCTTTTTCTCATGGTGGCAAAGTTATTCTAAAGAGCAAAGGTAGTGTTTCAAAAGGTGGTAAATTTGGTCTAAAAAGCAATGGGAATAATGTCATTGTTTCTCATGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTCTTTTGGTCTAGAAATAAAGAAGCAAATTATTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAACGTTCATATTGGTGTTTCTAATGGGTGGTAG ATGATGGTGAGTGCCACTTTCAACGATGCCACCGGTGTCGTAGATCACGGCCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGAAACCTCAAATGCCGGTAATAGCATCGCATCAACTGTAAACAATCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAATCGACAAACAGGACAAGGTTTCATCTTTTGGTCACGAAATTATTAAAAAGATCGATGCTTCTAATGATAATGAAATTAATTTGAAGAGTGGTGGCAACATTGCTTTTTCTCATGGTGGCAAAGTTATTCTAAAGAGCAAAGGTAGTGTTTCAAAAGGTGGTAAATTTGGTCTAAAAAGCAATGGGAATAATGTCATTGTTTCTCATGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTCTTTTGGTCTAGAAATAAAGAAGCAAATTATTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAACGTTCATATTGGTGTTTCTAATGGGTGGTAG ATGATGGTGAGTGCCACTTTCAACGATGCCACCGGTGTCGTAGATCACGGCCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGAAACCTCAAATGCCGGTAATAGCATCGCATCAACTGTAAACAATCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAATCGACAAACAGGACAAGGTTTCATCTTTTGGTCACGAAATTATTAAAAAGATCGATGCTTCTAATGATAATGAAATTAATTTGAAGAGTGGTGGCAACATTGCTTTTTCTCATGGTGGCAAAGTTATTCTAAAGAGCAAAGGTAGTGTTTCAAAAGGTGGTAAATTTGGTCTAAAAAGCAATGGGAATAATGTCATTGTTTCTCATGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTCTTTTGGTCTAGAAATAAAGAAGCAAATTATTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAACGTTCATATTGGTGTTTCTAATGGGTGGTAG MMVSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDASNDNEINLKSGGNIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNGW Homology
BLAST of Lsi02G024260 vs. ExPASy TrEMBL
Match: A0A0A0K5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.0e-56 Identity = 126/182 (69.23%), Postives = 144/182 (79.12%), Query Frame = 0
BLAST of Lsi02G024260 vs. ExPASy TrEMBL
Match: A0A0A0KAZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42 Identity = 105/181 (58.01%), Postives = 128/181 (70.72%), Query Frame = 0
BLAST of Lsi02G024260 vs. ExPASy TrEMBL
Match: A0A0A0K7W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.8e-41 Identity = 103/179 (57.54%), Postives = 125/179 (69.83%), Query Frame = 0
BLAST of Lsi02G024260 vs. ExPASy TrEMBL
Match: A0A5A7U057 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001040 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40 Identity = 101/178 (56.74%), Postives = 119/178 (66.85%), Query Frame = 0
BLAST of Lsi02G024260 vs. ExPASy TrEMBL
Match: A0A5A7U318 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001070 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 6.4e-38 Identity = 105/192 (54.69%), Postives = 123/192 (64.06%), Query Frame = 0
BLAST of Lsi02G024260 vs. NCBI nr
Match: KAE8646351.1 (hypothetical protein Csa_023818, partial [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55 Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 0
BLAST of Lsi02G024260 vs. NCBI nr
Match: KAA0048674.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18172.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 6.3e-40 Identity = 101/178 (56.74%), Postives = 119/178 (66.85%), Query Frame = 0
BLAST of Lsi02G024260 vs. NCBI nr
Match: KAE8646352.1 (hypothetical protein Csa_015951, partial [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 7.0e-39 Identity = 100/169 (59.17%), Postives = 118/169 (69.82%), Query Frame = 0
BLAST of Lsi02G024260 vs. NCBI nr
Match: KAA0048677.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18175.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 167.2 bits (422), Expect = 1.3e-37 Identity = 105/192 (54.69%), Postives = 123/192 (64.06%), Query Frame = 0
BLAST of Lsi02G024260 vs. NCBI nr
Match: KAA0048678.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18176.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 126.3 bits (316), Expect = 2.6e-25 Identity = 80/179 (44.69%), Postives = 111/179 (62.01%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|