Lsi02G023150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G023150
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSignal peptidase complex subunit 1
Locationchr02: 29748976 .. 29751239 (+)
RNA-Seq ExpressionLsi02G023150
SyntenyLsi02G023150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCCTTCTCTCAGTTTTCAAATTCCTTCTACTTTCATTTGTATATTTCTAAATCTTTGTTCGCAGCGCCTACGATTTTCATTATACTTGAATCTTCCTAATCTTTCTTCATTGGGTTGGATCATACGATTTATCTTCTTGTTTTCCATGTTTAAGATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGATGATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGCTGATAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAGGTCAGTTTGATTTTTGTTGTTCTTGTATTTAACAACATACAGTTTGAACCATTGAATTTCTAATGTCCCCAAAATGATTTTACATACATACACTTGTTATATGGATTATAATCTTGAAGTTTTAGAGAAATGCAGATCTTTTTTATTGATGCTCTTAGCTATTGCTTTACTTTGGTTTCGACTTGTGGGTTCTGTGGAAAGAGAACCCTTGTGTTTTTTCTGTTCTATGGTTAAAAATAGATTAAATCATAGTAAACATGTCTATATTGTCATAATTATAAGTTATTACTTGCTTGCTGCTGTTCCCGGGTTATCCAGGCTTCTTTTGGTAGCCATTTGGTTTTTTATTTTTGAAAATTAAGTCTATTTTCTATCAATTTCTTACAATGATTTTGTTGAATTCTTGGCTAAATTCCAAAGACAAAAACTACTTTTTTTAGTTATCAAAACTTGGACTGATTTTTAAAAACATTGGTAAAAAGTAGATAACAAAGCAAGAAATTTGGAGGTGGAAGGGGTGTTCATAGGCTTAATTTTCAAAAACTACAAACTAAACAGTTACCAAACGAAGCCTTGATTTTTTGTTTTTGAAAATTAAGCCTATTTCCTCTCAATTTCTTACAAAGCTTTGCATCGATCTTACATAAAATGGCTGAATTCATAGCCAAATACCAAAAACAAAAACAAGTTTTTAAAAACTACTTCAAAATTTGGTTTGGTTTTTTTTATACATTGGTAAAAGTAGATAATAATGAAGAAATTTAGAGCAAGTATTTATAGGCTTAATTTTTAAAAGCTAAAAATCAAAAACTAAATTGTTACCAAGGGGCCTAAATGTTTTTTTATTACTATAATATACATTTGAAGAGCATTTTGAAAGTAAACTGAATTAATTCATACATAGGATGAATATTGCCTCTACAGATTGTCATCTGCACACCATAATATCTAGGAAGGCATTTCAAGTTACATTTTTCGTACACTCTATGCTATTTCTAAAGATTACTTATTATGGGTTAGTGTTGTCAAAGCATTACTTTTGGAGATTTGGATGGAAAGAAACCATCGTACATTTCAGAGTGCTTCTCAATGTTCTTACTCTATTTATGACTCGGCTTGTCTAAAGCCTTATTCATGTTGCTTCCTCTAAAAAAAAGTTTGAAGGTTTCTGGATTCAAGATATCTCTTGCAATTAGTTGGCTTTCATTTCTCCTTCATAATTGTGTTATCCTTTTAAGTTTTGTTGATGTTCTGAGTTTCTTGTTTTGTTTTAAGTACTTTTTGTATCTCTGAGCACCTTATTGGAAAGTTTTGTATCCTTTCCTTTAAAATTTGATTAGGAATTCAAGTATTCGATTGAGTTTTTGTAGAATAGTAGAGTGGTTAGGACAACGTCGTTTTGTAGTAGTGTTATGATAGTTAAGTTTGATATTGGCAGATTGAGATAATTGTCCCCCTTTTTTTTTTAATGGAAGAGGAAATATTTCATAAACCAACAACAGGACGAGAGACCACAACCTCAGAAATAACTGAGGAAAATCACCTTGGCACAAAAGGAAACTGCCCTCCATCTTCTTTAGAGAGGTCGTCGAATGAGGCTGCTCATCGCCTTGCTCCAGGCGACAATGGAGTTTGAGAATTTTGTGTTTGATTTTGGTTGTAATGGTTTTTTTTCCCTTGGTTTTCAATGTAGGCTAAAAGAAAACATTTCAATTGATTCTAGAGCATGAAATTAGACTATAGATCCTTTCCTTTTGATTAGTTAATCCTTACCAATGATGGGATTCATTCTTCTTTTATATATATATATGTGCGCGCGCTTCAC

mRNA sequence

CTCTCCTTCTCTCAGTTTTCAAATTCCTTCTACTTTCATTTGTATATTTCTAAATCTTTGTTCGCAGCGCCTACGATTTTCATTATACTTGAATCTTCCTAATCTTTCTTCATTGGGTTGGATCATACGATTTATCTTCTTGTTTTCCATGTTTAAGATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGATGATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGCTGATAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAGATTGAGATAATTGTCCCCCTTTTTTTTTTAATGGAAGAGGAAATATTTCATAAACCAACAACAGGACGAGAGACCACAACCTCAGAAATAACTGAGGAAAATCACCTTGGCACAAAAGGAAACTGCCCTCCATCTTCTTTAGAGAGGTCGTCGAATGAGGCTGCTCATCGCCTTGCTCCAGGCGACAATGGAGTTTGAGAATTTTGTGTTTGATTTTGGTTGTAATGGTTTTTTTTCCCTTGGTTTTCAATGTAGGCTAAAAGAAAACATTTCAATTGATTCTAGAGCATGAAATTAGACTATAGATCCTTTCCTTTTGATTAGTTAATCCTTACCAATGATGGGATTCATTCTTCTTTTATATATATATATGTGCGCGCGCTTCAC

Coding sequence (CDS)

ATGTTTAAGATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGATGATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGCTGATAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAG

Protein sequence

MFKMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
Homology
[Close]
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match: Q944J0 (Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At2g22425 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.8e-23
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N
Sbjct: 1  MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
           HPL WLDP  A+K+PKP+    V  KKK +KK
Sbjct: 61 LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

[Close]
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match: B0FWK4 (Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.0e-10
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0 

Query: 3  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFF 62
          +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP +
Sbjct: 11 QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 63 NRHPLNWL---DPCVADKYP 80
           RHPL WL   D    DK P
Sbjct: 71 RRHPLKWLPVQDSGTEDKKP 90

[Close]
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match: Q3T134 (Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-10
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 0 

Query: 3  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFF 62
          +MD+ GQKLAEQ+ Q +++  A+VGF  GY+   F   + +  A    + L+T+P WP +
Sbjct: 11 QMDYKGQKLAEQMFQGIILFSAIVGFIYGYLAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 63 NRHPLNWL---DPCVADKYP 80
           RHPL WL   D    DK P
Sbjct: 71 RRHPLKWLPVQDSSTEDKKP 90

[Close]
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match: Q9Y6A9 (Signal peptidase complex subunit 1 OS=Homo sapiens OX=9606 GN=SPCS1 PE=1 SV=5)

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-10
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 0 

Query: 3   KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFF 62
           +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP +
Sbjct: 78  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 137

Query: 63  NRHPLNWL 71
            RHPL WL
Sbjct: 138 RRHPLKWL 145

[Close]
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match: Q9D958 (Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-10
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 0 

Query: 3   KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFF 62
           +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP +
Sbjct: 70  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 129

Query: 63  NRHPLNWL 71
            RHPL WL
Sbjct: 130 RRHPLKWL 137

[Close]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match: A0A0A0KS09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 4   MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
           MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFN
Sbjct: 111 MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 170

Query: 64  RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
           RHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Sbjct: 171 RHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match: A0A1S3BET6 (probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488895 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Sbjct: 61 RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match: A0A5D3CZV6 (Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002180 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Sbjct: 61 RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match: A0A6J1KDF1 (probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111493339 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.4e-36
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYACGVVLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP VA+KYPKPQPQEPVVLKKKP KK
Sbjct: 61 RHPLKWLDPSVAEKYPKPQPQEPVVLKKKPTKK 93

[Close]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match: A0A6J1GX63 (probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111458355 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 78/93 (83.87%), Postives = 82/93 (88.17%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP VA+KYPKPQPQEPV LKKKP KK
Sbjct: 61 RHPLKWLDPIVAEKYPKPQPQEPVALKKKPTKK 93

[Close]
BLAST of Lsi02G023150 vs. NCBI nr
Match: XP_004135313.1 (probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 probable signal peptidase complex subunit 1 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.7e-37
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Sbjct: 61 RHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 93

[Close]
BLAST of Lsi02G023150 vs. NCBI nr
Match: KGN51679.1 (hypothetical protein Csa_009252 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.7e-37
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 4   MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
           MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFN
Sbjct: 111 MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 170

Query: 64  RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
           RHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Sbjct: 171 RHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of Lsi02G023150 vs. NCBI nr
Match: XP_008446045.1 (PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446046.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_016900289.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >KAA0034201.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa] >TYK15719.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 3.5e-37
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Sbjct: 61 RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of Lsi02G023150 vs. NCBI nr
Match: XP_038882954.1 (probable signal peptidase complex subunit 1 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 5.1e-36
Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQIMLVAFAVV F TGY+MGSF+MMILVYA  V LTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYIMGSFRMMILVYAGGVVLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP +A+KYPKPQPQEPVVLKKK AKK
Sbjct: 61 RHPLKWLDPSLAEKYPKPQPQEPVVLKKKTAKK 93

[Close]
BLAST of Lsi02G023150 vs. NCBI nr
Match: XP_023549840.1 (probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFN
Sbjct: 1  MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RHPL WLDP VA+KYPKPQPQEPVVLKKKP KK
Sbjct: 61 RHPLKWLDPSVAEKYPKPQPQEPVVLKKKPTKK 93

[Close]
BLAST of Lsi02G023150 vs. TAIR 10
Match: AT4G40042.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 112.1 bits (279), Expect = 2.5e-25
Identity = 58/93 (62.37%), Postives = 67/93 (72.04%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKLAEQLMQI+L+  AVV F  GY   SF+MM+L+YA  V LTTLIT+PNWP FN
Sbjct: 1  MDWQGQKLAEQLMQILLLIAAVVSFVVGYTTASFRMMMLIYAGGVVLTTLITIPNWPCFN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
          RH L WLDP  A+K+PKPQ       KK  +KK
Sbjct: 61 RHHLKWLDPSEAEKHPKPQVVVVSSKKKSSSKK 93

[Close]
BLAST of Lsi02G023150 vs. TAIR 10
Match: AT2G22425.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N
Sbjct: 1  MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
           HPL WLDP  A+K+PKP+    V  KKK +KK
Sbjct: 61 LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

[Close]
BLAST of Lsi02G023150 vs. TAIR 10
Match: AT2G22425.2 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0 

Query: 4  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFN 63
          MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N
Sbjct: 1  MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 64 RHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK 97
           HPL WLDP  A+K+PKP+    V  KKK +KK
Sbjct: 61 LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

The following BLAST results are available for this feature:
BLAST of Lsi02G023150 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q944J08.8e-2360.22Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
B0FWK45.0e-1042.50Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1[more]
Q3T1346.5e-1041.25Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1[more]
Q9Y6A98.5e-1044.12Signal peptidase complex subunit 1 OS=Homo sapiens OX=9606 GN=SPCS1 PE=1 SV=5[more]
Q9D9588.5e-1044.12Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3[more]
BLAST of Lsi02G023150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS091.3e-3787.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1[more]
A0A1S3BET61.7e-3788.17probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488... [more]
A0A5D3CZV61.7e-3788.17Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1KDF19.4e-3684.95probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GX632.7e-3583.87probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of Lsi02G023150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135313.12.7e-3787.10probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 pr... [more]
KGN51679.12.7e-3787.10hypothetical protein Csa_009252 [Cucumis sativus][more]
XP_008446045.13.5e-3788.17PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446... [more]
XP_038882954.15.1e-3686.02probable signal peptidase complex subunit 1 [Benincasa hispida][more]
XP_023549840.11.9e-3584.95probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo][more]
BLAST of Lsi02G023150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G40042.12.5e-2562.37Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
AT2G22425.16.2e-2460.22Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
AT2G22425.26.2e-2460.22Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009542Signal peptidase complex subunit Spc1/SPCS1PFAMPF06645SPC12coord: 4..72
e-value: 7.9E-29
score: 99.6
IPR009542Signal peptidase complex subunit Spc1/SPCS1PANTHERPTHR13202MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNITcoord: 3..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G023150.1Lsi02G023150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045047 protein targeting to ER
biological_process GO:0006465 signal peptide processing
biological_process GO:0006412 translation
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome