Lsi02G021790 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCTCTCCACCTGGTTCCGCTACATAGCTCACAAGCTTGAATACTCCGTCTCTCTCAGTTGGAAGGTCTTTCACTTCCTCTTTCTAACCCTATTCTTCAATTTTCTACATGGGTTTTTGTTCCATCACTGTGTTTTTGCCTCATAAGTTGTTGCTTCTTTTGATTATTCGAACATTATTGGAGTTTCTTTAGAATAATCACATTTCTTGCACTACTCTTTGTCATCGGGCTTTCGGATTTATTATGCGTTCTTGGAATTTCAATTCGCATTTCTTGATTTTATTGGTTTTGGTTTTCGATCACCTAGGAGTCCTCTGGTTTTGTTCTTCGTTTATAAGTTCTTGACAATTTATGTGTATCGTCACTAAATTTTTGAAGGTGATTGGTACATTTTTACAGTGTCACATTCTTTACTGAAGAAAAGTAGAATGCTGTTTGTTTTGATTTTTTCTTGAATGGCTACTTCTTCAATGTTAATTCTTGGTTTGTTAGTTTGATTTATGATTATTAACTCATGTTGTCATTTACCATTTACCTATCAAGGGCGGGCAAGTTAGTAAGTGCGTTGAAAAAGAAAAGATTTCGCGTAGAGTTAAATTCTTTCACATGATATCTAAAGAACTTTTAATTTTTGTTGTTAGTTTCATCTTATTCATATCTGCCGTCTCACCATGTTGTTGTTCATTCATATGCTGAGTGGGGAAATTGCAGGATACATAATATTTACTGCCCTTTCTTGAGACAGGTTTGGGAGGAAGTTTTAATTGTGTTTTCGGCTAGATTTTGAACTTTTCTCAAAGGACATCATCCCTACACTGCTGCTAGGCCTTTCTCTCAGAAGAAAACATAATTTATCCGTTTCTTTCAAATAAAATTATTTCTTGAGAAATTAGACGAGTCTTTCAAATGGAAAGAGTAATTCTTTCCAATTTTCTGCATATACTTTGTTTCTTCACTTCTTGGCCTCCTATTGTAGTCTCTATATATGTTTTTTCAATTTCTCTCTTTTTTTCTTTTTTCTTTTTAATTTTTTTAATGCAAGTCCAATAGAGGGAGGTTTTTTGTTATCTTTTTTTGGCTTTAACTGTGCGAGAATGTTTATCTCCTGTTTTCCTTTTCAGAATGAGTGGTCTTTTTATTTTCTTATAGAGATGTATTTCTAATGTTTGAGAAGTTTAAGCCGGCCAGGAACTTCTATATTGAATGTGTGTGAGCTTCTGGGACTTGACAATTAAACCGTGTGCCAGGAAAAAGCAAATGGTGCATAGCTAATGCCAGTTCCTGAAAATTCATACTGTCCTTGCGGGACTGTCTTAGAACTTCTGATATCTCTATTCTAGTAGGAAATCTTAACATGATTTATCTTTCCATTCTCTCTTCGTGCATCTCCTTTCTATTCTGGGTTAGCTTGTAGTTATTTCTCAGTTAGCTTCTTGGTTCTCAGCTAGGAAGCTTTTGAACTCTAAGAAGTGTCTGATTGAGAAAAAAAGTAGAGATGTCTTAGCCATTTAAACCTTTCAAATATTTTATATAACAATGACAAGAAGAATCTTTAACTCTGATGCAGAACTATAAAGGGGGTCAAATTACTGACAAAGAAGTAGGTGATGCCGTTTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTGGCTTAAGGGAGAGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGGACGCTTCTCGTGCGCAAATTACCTACTGCAGATCCAACGTAATCTTTGTCTTCCTCTTAGTATAAAAAATCTATTCTCTTTTTCTGCAACACCAGTTTCCTGTTTTTGTCATAGCTTTACAATGCTTACTAATTTGGTCCTATTCCTATTGATTTAGTTCTAATTTATCACCTCAATTAAATTTGAAATTCTAAATAAAGTGAAGTCAGTCCTATACTCTACTTTTTTGTACTTCAGTGTTTATTTTTATTATTTGACAAGAAACAAACTTCATTAAGAAAAGAGAATATAATTCAAAGACAGATGAATAAAGGGGGTCCGATTATTCTATAAAATGGAAAGAAAATTATTACAAAAAAAAAAAATTTAATTTCTTTACATGTGGGGAGGAATGAAGTAAACTTATATTCCATGTTTGATCGATGGTCTTTTCTTCTTGAGAGAAATTATTCAGTGTGGCGACCACCTTAAATAATGGTCCAAAAATAGTTTTTAATTTATTCTTTGTACATCTAATGGCATAAAAGTGGCAGTTCATATGTTCAATATCTTCTTCCTCTTATTTCCATTCTGAGAAAAAAAAAATCTTCTTCCTCTTAAAAATTCTTCTTTTTCTACAGTCCAACCAAATAGTTGAAAGCACAACATATAAGTATTTGACCAATCAATTCTTGAGTGCATCTGAGGAAGGGCCATTATAAGTAAAGAAATTCGGAAACTTTGACCGAAAGGAAAAAATATAAGGAGGTTGTTTAACAACTCACTGACGGTAAAAACCACCATTCTGCAACTAAATGCTTGCAAAACTAAAAGCTAGCCTTCAGCCAAACAGAATCAAAATAAAGCTAGCTCAAAAAACCCCCTACATCACTACCTATGTAAAGGAAGCACCAGTTTGAGTTAAGGTAACTGAGGAGATCTCTTTGCTGTATATCGTCATTTGTGTTCAAGCCATCGAGAGGTAGTGTCCCTTAGAAAGAATTTACACTCTTTGGAGCCTTCCACTTCCAGAAATACTGTAAAACAAGGCCACGGTAGGAATACTGTTGGGGTTGCTAGAAATATTATTAGGGTATTAAGGGCATATTAATCACTAGTCGAGGAATTGGTTACATATCAAATGAGTGGGAGGAAATTAAGGTAGGCATTGTTTTAGTTGATTTAGGCTTGAGAATACTTGAGACAGGGTTCTAAAGGGCTAGAATATACTTTGCTATTATTATATTTCTATTCTAAGTACCTCAAATACTTAGATCTTTCATAAGGCTCTTTTAGAAAACGCTAAAGCCACTTTGCTAGAAGAGCCAATTTTCTCTCCTTGGTTTTCTATCCCCTCAGAAATTGAGGAAGAGAGGTTATATTCCACTTTCCCATAAAGAACAAGGATTGGGGTCTAGAAGGTAAATTGGTGCAGGTTAAGGGAAGAGATCCCCTTAACCCTGACAAAGACCAAACTGTAGACATTGAAAGTTTAATTTTTAACCTAAAGGTTTCCTTGAAGGCTCTTACTGGATTAGGAAGATTACAAATTATTTTTTTATGTATTCTCCACTGAGAAGAAGAAGACGTCATTTGTATTTTGCAATATGACTTCCATATTTGCTAATTTTTAATGTATTCTCCTTTTCAGTAAATAAGGGGCTATGTATGTTATCTTAACAATAAATTTATCCTCACCTTTGTGACAGAAGTCTCTCTCTCTTTCTCTCAAGAAACAATTTCATTGATGATTCTGAGAGAAAAGTCTTGGAACGTGCGTAGTCAATTTTGAACATGTTTTTTCACTCCTATAGAGTTTTCCATTATATCTATCTGAACTAGAAGCTTTCTTATCACCCAAATTATCCTCTGGTTTGATTTCCTCTTTAGCTAAAGGCCTCCCATGGCAACCTCCATCCTTAGGATTCAAGACAAATTAAAAAGAGCCACTCTGTAGCTTCTCCCATTTTCTGCATTAGACACTATTCCCTTGAGTAGAGCAAAATTTTTAGTTCAAGTTCTCCATATTCCTAGCCTACATTATTTGGTGGAAAAAAGCGATTTGTGTCACTATTTAGATTCCATCTAAGCTTACCTTTTCTGAGCCCGCATCATATTTTTTTTGTGAAGTTCTTGTAGGTTGGTTTTAAGTGAAGTGCAAGAGGTTCTCATCGTCAGTGGACAAGTTTCTTAAAATCACAACTTTATTAAGGTTGCAGACTTCTTTAAACAAGCAGAGTTTTTCAGTTTGAATGTGGCCAAAATGCTCTAGCCATAACAAACCAATTTTTAGCCAGATCCCATGTCTGGATTATCAATTCAACAATCAGCAGTGGAACGCCCCATTTTAAGAGGACAAGGCATAAAACTCAGGGAAGAGGGAAGACAAAGGTGTTTCCCTGCCCAGGCATCTTCCCGAAAGAGAACTGGCTGAACACTTTCCACTTTAAACTTCACAAGCTTCTTAAAACCAAGAGCTTTCCCATTGGTGTACTTCAGTACATGTTATGAGGCGCTGTTGCAAAATCATGTCAAACAGTATAATAATGAATGAGAACTGTTAATAGTTTATAATGCATTTGCTTGTTATAGGCTGTAATTTAGAGAAATTTGCTTAATGCTAGATTTTTTAGCCTATAATTGTTACCAACTTTTCTGACGGCAGAGATATTTGTTTCACAGGAGTGTTTTTGTTGGAGACGTCGTGGTAGTGAAGGAGCCAGAGAAACCACAAAACTATCTTGTGAGAAGATTGGCTGCAGTTGAAGGGCATGAAATGCTGTCTACGGATGAAAAAGATGAGCCTTTCATACTTGAGAAGGATCAGTGCTGGTTGTTGGCAGATAATGAGAAGTTGAAGCCGAAGGTATGATACAATGATGATCACCATAATTCTACTGTAGATAGTTTTTTCCTCAGCATTGGTATTTATTGGTTTCTCTATGAAGGTGGTACCTTTTTGCTATAGATCAATACCCTTTTGGTTGAGTTTTATTTTCTTTAATTTTTTAATTATGGAATTTTAGGAGCAGCTAACGCCAAAACAACATCATACTATAATTATTTATAAACCTTTCCTCGTTTTGTTAATTTTCTATCACATTCTTGGTCTTTTGTGATTTTAGTCCCTTTTTTGTTTTGCCCTTTCCCGTCATTTGCCAAAAACTATTTGGACGCTCTTTTCTGTGATCTTTGATTTTTCTTAAACTGCCAGGCATTCCATTTTAGTTTATGAACTTTGCATAAAAAAACCACTCTAGTCAGTGTTAATGTATAGAAATCTTGATCATACACTTGGAGAAGTTTTGGACCATGTTCTTTGGAAAAACTCTTTTAAAAGTAAAATTCGTCAAAATTTGATTCAAATTGATAGGCATCTAGGGTTTGCTTTGCTGTATTGTGTAATAATTAATTAAGTCTTGTAATCTTCATCACAAAACTAAAGTGTTTTTTCCCCCTCATTTTCCTCTTTTTACCCTTGACAGGAGGCGTACGACAGTCGAACATTTGGTCCAGTTTCAATGTCAGACATTGTAGGCAGAGCCATATATTGCCTACGCACAGCAGTCGATCATGGCCCGGTGCAGAATAGGTTAGCCACTATTCATTGAGTAGTCAACTCTATTTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAGAAAAGTAAAGAAAAAGTAAAATTTTATTGGGACTGACTGAGTTGTGTTTGTTTTCACTAGTGATTTTAGCATGAAAAAGGATTCGCCGATATTGGAAATCGAACTGGACGTTGACGAGATGGCAAAAAATCACAAGGCCTGAGAGAAAGAGAGTTTGATCTGGTTTGGACTGTGTATGTAATCAATCTCTTTTGCCAATTTTTCATTGCAGATGAACTCCAAATTTTTCAATGGATTTGGGGATATTGAGTTCCAATTTGTTTCTAATCAATAGTTGATAAACATCCATAAGATTTTACCTATATTCAGGTTTACTTCTGTCTTTCTGGAAAAAAAAGCAATAAAATGATTACTGATCTACTTACCTT ATGGCTTCCCTCTCCACCTGGTTCCGCTACATAGCTCACAAGCTTGAATACTCCGTCTCTCTCAGTTGGAAGAATGAGTGGTCTTTTTATTTTCTTATAGAGATAACTTCTGATATCTCTATTCTATTAGCTTCTTGGTTCTCAGCTAGGAAGCTTTTGAACTCTAAGAAGTGTCTGATTGAGAAAAAAAGTAGAGATAACTATAAAGGGGGTCAAATTACTGACAAAGAAGTAGGTGATGCCGTTTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTGGCTTAAGGGAGAGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGGACGCTTCTCGTGCGCAAATTACCTACTGCAGATCCAACGAGTGTTTTTGTTGGAGACGTCGTGGTAGTGAAGGAGCCAGAGAAACCACAAAACTATCTTGTGAGAAGATTGGCTGCAGTTGAAGGGCATGAAATGCTGTCTACGGATGAAAAAGATGAGCCTTTCATACTTGAGAAGGATCAGTGCTGGTTGTTGGCAGATAATGAGAAGTTGAAGCCGAAGGCATCTAGGGTTTGCTTTGCTGAGGCGTACGACAGTCGAACATTTGGTCCAGTTTCAATGTCAGACATTGTAGGCAGAGCCATATATTGCCTACGCACAGCAGTCGATCATGGCCCGGTGCAGAATAGTGATTTTAGCATGAAAAAGGATTCGCCGATATTGGAAATCGAACTGGACGTTGACGAGATGGCAAAAAATCACAAGGCCTGAGAGAAAGAGAGTTTGATCTGGTTTGGACTGTGTATGTAATCAATCTCTTTTGCCAATTTTTCATTGCAGATGAACTCCAAATTTTTCAATGGATTTGGGGATATTGAGTTCCAATTTGTTTCTAATCAATAGTTGATAAACATCCATAAGATTTTACCTATATTCAGGTTTACTTCTGTCTTTCTGGAAAAAAAAGCAATAAAATGATTACTGATCTACTTACCTT ATGGCTTCCCTCTCCACCTGGTTCCGCTACATAGCTCACAAGCTTGAATACTCCGTCTCTCTCAGTTGGAAGAATGAGTGGTCTTTTTATTTTCTTATAGAGATAACTTCTGATATCTCTATTCTATTAGCTTCTTGGTTCTCAGCTAGGAAGCTTTTGAACTCTAAGAAGTGTCTGATTGAGAAAAAAAGTAGAGATAACTATAAAGGGGGTCAAATTACTGACAAAGAAGTAGGTGATGCCGTTTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTGGCTTAAGGGAGAGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGGACGCTTCTCGTGCGCAAATTACCTACTGCAGATCCAACGAGTGTTTTTGTTGGAGACGTCGTGGTAGTGAAGGAGCCAGAGAAACCACAAAACTATCTTGTGAGAAGATTGGCTGCAGTTGAAGGGCATGAAATGCTGTCTACGGATGAAAAAGATGAGCCTTTCATACTTGAGAAGGATCAGTGCTGGTTGTTGGCAGATAATGAGAAGTTGAAGCCGAAGGCATCTAGGGTTTGCTTTGCTGAGGCGTACGACAGTCGAACATTTGGTCCAGTTTCAATGTCAGACATTGTAGGCAGAGCCATATATTGCCTACGCACAGCAGTCGATCATGGCCCGGTGCAGAATAGTGATTTTAGCATGAAAAAGGATTCGCCGATATTGGAAATCGAACTGGACGTTGACGAGATGGCAAAAAATCACAAGGCCTGA MASLSTWFRYIAHKLEYSVSLSWKNEWSFYFLIEITSDISILLASWFSARKLLNSKKCLIEKKSRDNYKGGQITDKEVGDAVWKNLLQGKLTYLHWLKGEEMAPTVGETGGTLLVRKLPTADPTSVFVGDVVVVKEPEKPQNYLVRRLAAVEGHEMLSTDEKDEPFILEKDQCWLLADNEKLKPKASRVCFAEAYDSRTFGPVSMSDIVGRAIYCLRTAVDHGPVQNSDFSMKKDSPILEIELDVDEMAKNHKA Homology
BLAST of Lsi02G021790 vs. ExPASy TrEMBL
Match: A0A6J1GQA3 (mitochondrial inner membrane protease subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111456518 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.4e-101 Identity = 194/254 (76.38%), Postives = 202/254 (79.53%), Query Frame = 0
BLAST of Lsi02G021790 vs. ExPASy TrEMBL
Match: A0A6J1JS86 (mitochondrial inner membrane protease subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111487930 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100 Identity = 193/254 (75.98%), Postives = 202/254 (79.53%), Query Frame = 0
BLAST of Lsi02G021790 vs. ExPASy TrEMBL
Match: A0A6J1H7P2 (uncharacterized protein LOC111461243 OS=Cucurbita moschata OX=3662 GN=LOC111461243 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 3.2e-99 Identity = 193/254 (75.98%), Postives = 200/254 (78.74%), Query Frame = 0
BLAST of Lsi02G021790 vs. ExPASy TrEMBL
Match: A0A6J1KT69 (uncharacterized protein LOC111498007 OS=Cucurbita maxima OX=3661 GN=LOC111498007 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98 Identity = 192/254 (75.59%), Postives = 199/254 (78.35%), Query Frame = 0
BLAST of Lsi02G021790 vs. ExPASy TrEMBL
Match: A0A1S3BH09 (uncharacterized protein LOC103489739 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489739 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.9e-97 Identity = 187/254 (73.62%), Postives = 200/254 (78.74%), Query Frame = 0
BLAST of Lsi02G021790 vs. NCBI nr
Match: XP_038897309.1 (mitochondrial inner membrane protease subunit 2-like [Benincasa hispida]) HSP 1 Score: 379.4 bits (973), Expect = 2.4e-101 Identity = 196/254 (77.17%), Postives = 202/254 (79.53%), Query Frame = 0
BLAST of Lsi02G021790 vs. NCBI nr
Match: XP_023547664.1 (mitochondrial inner membrane protease subunit 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.0 bits (972), Expect = 3.2e-101 Identity = 194/254 (76.38%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of Lsi02G021790 vs. NCBI nr
Match: XP_022954177.1 (mitochondrial inner membrane protease subunit 2-like [Cucurbita moschata] >KAG7014558.1 Mitochondrial inner membrane protease subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.9 bits (969), Expect = 7.0e-101 Identity = 194/254 (76.38%), Postives = 202/254 (79.53%), Query Frame = 0
BLAST of Lsi02G021790 vs. NCBI nr
Match: XP_022991205.1 (mitochondrial inner membrane protease subunit 2-like [Cucurbita maxima]) HSP 1 Score: 375.6 bits (963), Expect = 3.5e-100 Identity = 193/254 (75.98%), Postives = 202/254 (79.53%), Query Frame = 0
BLAST of Lsi02G021790 vs. NCBI nr
Match: KAG6576037.1 (hypothetical protein SDJN03_26676, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 374.8 bits (961), Expect = 6.0e-100 Identity = 193/254 (75.98%), Postives = 201/254 (79.13%), Query Frame = 0
BLAST of Lsi02G021790 vs. TAIR 10
Match: AT1G06200.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 255.8 bits (652), Expect = 3.8e-68 Identity = 132/254 (51.97%), Postives = 174/254 (68.50%), Query Frame = 0
BLAST of Lsi02G021790 vs. TAIR 10
Match: AT2G31140.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 255.4 bits (651), Expect = 4.9e-68 Identity = 134/254 (52.76%), Postives = 169/254 (66.54%), Query Frame = 0
BLAST of Lsi02G021790 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 49.7 bits (117), Expect = 4.1e-06 Identity = 37/127 (29.13%), Postives = 59/127 (46.46%), Query Frame = 0
BLAST of Lsi02G021790 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05 Identity = 34/117 (29.06%), Postives = 54/117 (46.15%), Query Frame = 0
BLAST of Lsi02G021790 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 45.8 bits (107), Expect = 5.9e-05 Identity = 39/159 (24.53%), Postives = 68/159 (42.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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