Lsi02G020450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G020450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr02: 26599770 .. 26601415 (-)
RNA-Seq Expression	Lsi02G020450
Synteny	Lsi02G020450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATATGCATTTGTTTGAACACTCAACTTTCACAAGTGAGCGGTGAAATATCGTTGTTCGATAAGTATTACGTTCATATCATCAACGGCTTCAAAGACGCGATGATCGGAGTTCATTGCAAGTCAAAAGACAATGATTTGGGCGAACAATACGTCCCGGTTGGGGGCGAATTCCAATGGAATTTTCGAACAAACTTCTTTGGGAGGACGTTGTTCTTTTGTCATGTTTGGTGGAATGAAGGATACATAACGTATAAGGCGTATTGGGATAACGAAGAGTTTAAGAGAGAAGCATGTGGAGATGGACATTGTAGATGGAAAGCTGATGCTCGGGGAATTTCTAATTTTAATGTTAGGCAAAATGTGTATCAATTGCTATACTTATGGCAACATTGATGAAAATCCCCATAGTTAATAATTAATAAGGATTGACACATTGTAATGGGGATTATTATTATTATTCATCAAGAAATAAAAGGGTTTAATCTTTTTCCTACCTGTTTTATATAATGGGAAAGTTGCAATAGAAATAAAAAAAGAGTCGATTTTAAATATAAAAAAATGAGTTGAACTATTTATAAATATACAAAAAATTTACTGTTTATCAGTACAACAGATTTTTATCGCTTGAGCGATAGATGCGATAAAAGTCTATCGCGGTCTACCGCTAATAGATAGTGAAATCTTTTTATATTTGTAAATAGTTTGATATTTTTTCTCTTTATAGTAATTTTCTTAAAAAAAACTTTAATTTGTAAATCTAGTAATGGTTTTTTTTTAATTGGCAAATATAACAAAAAATGTTAAATATTATTTCCCTTTTCAATTATTTCAGTTTTACCCATTATATTGTTGTATCACCATGTATATTAGGTAATAAATCTGTTATACTTCTCATATAAATTTCGCACTGTCGATTTCTTTTTTTACATTATTATTTGTTTGTTCATTTCATTTCTATCGTAACAACTATATATATATATATTACTATTTTGAAAACGACCTAAATAGAAAAACATACGTACAAAAAAGGAAGGGTAGTTTTTATTTACATTTATTAGAAAACCTCACTTGGTTTTCCAAAAAAAACAATAAGAAAAGAAAATACTCACTTGTCAATTAACTTTTATCCTTATAAAGATGAAATATAAGTATATATGTGTGTGGAACTAATGTAACAAACTAACACTTAATAGAAAGAATGGGCATCCACAAGAGCTACATTATCTTGCTTGTGATATCTATTTCTTTGAGTACAGTTGAGCGATGCATTTTTCGATAAATATTACGTTAACATCATCAATGACTTCGATAACATGACAATTGAAGCCCATTGCAGGTCGAAAGATAACGATCTCGGCAACAATTTCATCCCGATAAGGGTGAGTACCAGTGGCATTTCCGAACAAACTTGTTCAAGACGACATTGTTCTAATTGTCATATTTGGTAGATTGAAGGGCACATTACATATCAGGCCTATTGGCATGAGGATAACTTTGAGAGAGATGTATGTGGAGATGGACATTGCAGATGGAAAGCAAATGCTCAGGGAATTTCTAGTTTCAATGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGGGAACATTGA

mRNA sequence

ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATATGCATTTGTTTGAACACTCAACTTTCACAAGTGAGCGGTGAAATATCGTTGTTCGATAAGTATTACGTTCATATCATCAACGGCTTCAAAGACGCGATGATCGGAGTTCATTGCAAGTCAAAAGACAATGATTTGGGCGAACAATACGTCCCGGTTGGGGGCGAATTCCAATGGAATTTTCGAACAAACTTCTTTGGGAGGACGTTGTTCTTTTGTCATGTTTGGTGGAATGAAGGATACATAACGTATAAGGCGTATTGGGATAACGAAGAGTTTAAGAGAGAAGCATGTGGAGATGGACATTGTAGATGGAAAGCTGATGCTCGGGGAATTTCTAATTTTAATTTGAGCGATGCATTTTTCGATAAATATTACGTTAACATCATCAATGACTTCGATAACATGACAATTGAAGCCCATTGCAGGTCGAAAGATAACGATCTCGGCAACAATTTCATCCCGATAAGGATTGAAGGGCACATTACATATCAGGCCTATTGGCATGAGGATAACTTTGAGAGAGATGTATGTGGAGATGGACATTGCAGATGGAAAGCAAATGCTCAGGGAATTTCTAGTTTCAATGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGGGAACATTGA

Coding sequence (CDS)

ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATATGCATTTGTTTGAACACTCAACTTTCACAAGTGAGCGGTGAAATATCGTTGTTCGATAAGTATTACGTTCATATCATCAACGGCTTCAAAGACGCGATGATCGGAGTTCATTGCAAGTCAAAAGACAATGATTTGGGCGAACAATACGTCCCGGTTGGGGGCGAATTCCAATGGAATTTTCGAACAAACTTCTTTGGGAGGACGTTGTTCTTTTGTCATGTTTGGTGGAATGAAGGATACATAACGTATAAGGCGTATTGGGATAACGAAGAGTTTAAGAGAGAAGCATGTGGAGATGGACATTGTAGATGGAAAGCTGATGCTCGGGGAATTTCTAATTTTAATTTGAGCGATGCATTTTTCGATAAATATTACGTTAACATCATCAATGACTTCGATAACATGACAATTGAAGCCCATTGCAGGTCGAAAGATAACGATCTCGGCAACAATTTCATCCCGATAAGGATTGAAGGGCACATTACATATCAGGCCTATTGGCATGAGGATAACTTTGAGAGAGATGTATGTGGAGATGGACATTGCAGATGGAAAGCAAATGCTCAGGGAATTTCTAGTTTCAATGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGGGAACATTGA

Protein sequence

MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYYVNIINDFDNMTIEAHCRSKDNDLGNNFIPIRIEGHITYQAYWHEDNFERDVCGDGHCRWKANAQGISSFNVGQNVYQLKFKWEH

Homology

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BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 48/154 (31.17%), Postives = 69/154 (44.81%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM 60
           M I K  + L ++ I + T+LSQ             S   S+F   K  V I N   + +
Sbjct: 1   MDIPKQYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQL 60

Query: 61  -IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEF 120
            +  HCKSKD+DLG + +  G  + ++F   FFGRTL+FC   W     ++  Y D+ + 
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 121 KRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY 139
             +  C    C WK    G   FN     FD  Y
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCY 154

[Close]

BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 41/139 (29.50%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 3   IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLG 62
           I K+ + ++VI + +    SQV    +++      V I N   D + + +HCKS D+DLG
Sbjct: 4   ILKTQVHVVVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLG 63

Query: 63  EQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKA 122
            + +   G + + FRT+  G TLF+CH  W      +  Y D+ +  R      +C W  
Sbjct: 64  LKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDI 123

Query: 123 DARGISNFNLSDAFFDKYY 139
             +G   F+ SD  F+  Y
Sbjct: 124 SIQGPCMFSESDHAFNICY 142

[Close]

BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-09
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 6   SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKS 65
           +CI   ++ IC +  L+      V G       +    ++ V ++NG      + +HCKS
Sbjct: 2   NCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKS 61

Query: 66  KDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDG 125
           K++DLGE  +     F WNF  N    T F+C++  + G++    +WD +      CG  
Sbjct: 62  KEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD-DVILFHRCGWK 121

Query: 126 HCRWKADARGISNFN 129
           +C W A   G+  +N
Sbjct: 122 NCIWTAKTDGLYLWN 135

[Close]

BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 31/97 (31.96%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 33  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNE 92
           ++ V + NG      + +HCKSK+NDLG+  +     F WNF  N    TLF+C++  ++
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDD 99

Query: 93  GYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN 129
           G++  K +WD +      C   +C W A   G+  +N
Sbjct: 100 GHMNVKVFWD-DVILFHRCDWKNCVWTAKNDGLYLWN 135

[Close]

BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 41/135 (30.37%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 10  LLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGE 69
           +  + + L+  LS+ SG    F    V I+N   +   IG+HC+SKDNDL  Q V  G +
Sbjct: 3   IFYVIVLLSFFLSKSSG---FFPVIEVRIMNRRGNGRSIGIHCRSKDNDLQNQTVTSGHD 62

Query: 70  FQWNFRTNFFGRTLFFCHVWWNE----GYITYKAYWDNEEFKREACGDGHCRWKADARGI 129
             ++FR +FF  T F+C + W++    G+ +Y+A  D++      C    C WK    G+
Sbjct: 63  MSFSFREDFFHTTHFYCDLQWDKETKFGFYSYQAKRDDD----GRC-SSQCLWKIMDDGL 122

Query: 130 SNFNLSDAFFDKYYV 140
             F+     +  Y++
Sbjct: 123 YGFDQEHQIWQIYHL 129

[Close]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL
Match: A0A0A0K4G8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333910 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 82/139 (58.99%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG 
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSS--ALFEKFYVHIINGFDNATIGAHCRSKDDDLGN 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW   +F+   CGDGHCRWKAD
Sbjct: 61  QFIPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKAD 120

Query: 121 ARGISNFNLSDAFFDKYYV 140
            +G+S++ +    +   Y+
Sbjct: 121 PQGVSSYFVDQKRYSLTYL 137

[Close]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL
Match: A0A5A7UAS5 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001420 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 82/125 (65.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MG  KS I+LLVI   L+T+L+QVS   + FDK+YVHIINGF +A IG HC+SKD+DL  
Sbjct: 1   MGNRKSFIILLVISTALSTELTQVSN--AFFDKFYVHIINGFDNATIGAHCRSKDDDLSN 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q++PV GEFQW+FRTNFFG TLF+CHVWW  G ITYKAYW   +F+   CGDGHCRWKAD
Sbjct: 61  QFIPVNGEFQWHFRTNFFGTTLFYCHVWWIGGQITYKAYWHENDFELSVCGDGHCRWKAD 120

Query: 121 ARGIS 126
            +GIS
Sbjct: 121 PQGIS 123

[Close]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL
Match: A0A061DMI7 (S-protein homolog OS=Theobroma cacao OX=3641 GN=TCM_003121 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.3e-23
Identity = 52/121 (42.98%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 5   KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYV 64
           ++ +++LV+ +C    +SQ     S+ ++  VH+INGF  +  +  HCKSKD+DLG  ++
Sbjct: 5   QNLMIMLVLILC----MSQSLVTYSIMNRCRVHVINGFSTNETLEAHCKSKDDDLGLHHI 64

Query: 65  PVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARG 124
           PV GEFQW FRT+FF RT F CH+WW+ G  T   +W +++F    CG G+CRW++   G
Sbjct: 65  PVHGEFQWKFRTDFFSRTRFSCHMWWSGGQKTLDVFWVDDKFIENECGGGNCRWRSQNDG 121

[Close]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL
Match: A0A5N6QIK7 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002526 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 9   LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGE 68
           L L + + L   +SQ S   SL  KY V I NGF++  + + C+S+D+DLG Q++PV GE
Sbjct: 5   LRLALMLVLILYMSQPSTTYSLLKKYGVDIFNGFQNQTLSIRCQSEDDDLGIQHIPVNGE 64

Query: 69  FQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGI 125
           FQW+FR N++G TL+FC++WW+ G+     +W + +F  + CGD  CRW     GI
Sbjct: 65  FQWHFRINYWGTTLYFCYMWWSGGHRRLDVFWADNKFIVDDCGDSDCRWMGKEDGI 120

[Close]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL
Match: A0A5N6QH10 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002525 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-22
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 9   LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGE 68
           L L + + L   +SQ S   SL  KY V + NGF++  + + C+S+D+DLG Q++PV GE
Sbjct: 5   LRLALMLVLILYMSQPSTTYSLLKKYGVDVFNGFQNQTLSIRCQSEDDDLGIQHIPVNGE 64

Query: 69  FQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGI 125
           FQW+FR N++G TL+FC++WW+ G+     +W + +F  + CGD  CRW     GI
Sbjct: 65  FQWHFRINYWGTTLYFCYMWWSGGHRRLDVFWADNKFIVDDCGDSDCRWMGKEDGI 120

[Close]

BLAST of Lsi02G020450 vs. NCBI nr
Match: KAE8646226.1 (hypothetical protein Csa_016670 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-51
Identity = 114/277 (41.16%), Postives = 155/277 (55.96%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG 
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSS--ALFEKFYVHIINGFDNATIGAHCRSKDDDLGN 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW   +F+   CGDGHCRWKAD
Sbjct: 61  QFIPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKAD 120

Query: 121 ARGISNF--------------------------NLSDAFFDKYYVNIINDFD-NMTIEAH 180
            +G+S++                          N+  AF  +++V +IN  + +  +  H
Sbjct: 121 PQGVSSYFVDQKRISPNSWKTLTLPSLCLETKDNVFPAFI-RWHVTVINRLNASKGMLVH 180

Query: 181 CRSKDNDLGNNFIP--------------------IRIE-----GH----ITYQAYWHEDN 222
           CRS+D+DLG   +P                     R++     GH      ++ +WH+  
Sbjct: 181 CRSQDDDLGLQTLPPTANITWSFEANFFHSTLFWCRLQKGGGGGHGSVRAAFKVFWHDVR 240

[Close]

BLAST of Lsi02G020450 vs. NCBI nr
Match: XP_031745088.1 (S-protein homolog 3-like [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-43
Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG 
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSS--ALFEKFYVHIINGFDNATIGAHCRSKDDDLGN 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW   +F+   CGDGHCRWKAD
Sbjct: 61  QFIPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKAD 120

Query: 121 ARGISNFNLSDAFF--DKYYVNIINDFDNMT 150
            +G+S++ +       + + V     FD MT
Sbjct: 121 PQGVSSYFVDQKRISPNSWKVKTTYVFDEMT 149

[Close]

BLAST of Lsi02G020450 vs. NCBI nr
Match: KAA0050599.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07841.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-42
Identity = 82/125 (65.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MG  KS I+LLVI   L+T+L+QVS   + FDK+YVHIINGF +A IG HC+SKD+DL  
Sbjct: 1   MGNRKSFIILLVISTALSTELTQVSN--AFFDKFYVHIINGFDNATIGAHCRSKDDDLSN 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q++PV GEFQW+FRTNFFG TLF+CHVWW  G ITYKAYW   +F+   CGDGHCRWKAD
Sbjct: 61  QFIPVNGEFQWHFRTNFFGTTLFYCHVWWIGGQITYKAYWHENDFELSVCGDGHCRWKAD 120

Query: 121 ARGIS 126
            +GIS
Sbjct: 121 PQGIS 123

[Close]

BLAST of Lsi02G020450 vs. NCBI nr
Match: EOX94034.1 (Uncharacterized protein TCM_003121 [Theobroma cacao])

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-22
Identity = 52/121 (42.98%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 5   KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYV 64
           ++ +++LV+ +C    +SQ     S+ ++  VH+INGF  +  +  HCKSKD+DLG  ++
Sbjct: 5   QNLMIMLVLILC----MSQSLVTYSIMNRCRVHVINGFSTNETLEAHCKSKDDDLGLHHI 64

Query: 65  PVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARG 124
           PV GEFQW FRT+FF RT F CH+WW+ G  T   +W +++F    CG G+CRW++   G
Sbjct: 65  PVHGEFQWKFRTDFFSRTRFSCHMWWSGGQKTLDVFWVDDKFIENECGGGNCRWRSQNDG 121

[Close]

BLAST of Lsi02G020450 vs. NCBI nr
Match: KAE7997940.1 (hypothetical protein FH972_002526 [Carpinus fangiana])

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-22
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 9   LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGE 68
           L L + + L   +SQ S   SL  KY V I NGF++  + + C+S+D+DLG Q++PV GE
Sbjct: 5   LRLALMLVLILYMSQPSTTYSLLKKYGVDIFNGFQNQTLSIRCQSEDDDLGIQHIPVNGE 64

Query: 69  FQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGI 125
           FQW+FR N++G TL+FC++WW+ G+     +W + +F  + CGD  CRW     GI
Sbjct: 65  FQWHFRINYWGTTLYFCYMWWSGGHRRLDVFWADNKFIVDDCGDSDCRWMGKEDGI 120

[Close]

BLAST of Lsi02G020450 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.1 bits (157), Expect = 8.2e-11
Identity = 48/154 (31.17%), Postives = 69/154 (44.81%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM 60
           M I K  + L ++ I + T+LSQ             S   S+F   K  V I N   + +
Sbjct: 1   MDIPKQYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQL 60

Query: 61  -IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEF 120
            +  HCKSKD+DLG + +  G  + ++F   FFGRTL+FC   W     ++  Y D+ + 
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 121 KRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY 139
             +  C    C WK    G   FN     FD  Y
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCY 154

[Close]

BLAST of Lsi02G020450 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 41/139 (29.50%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 3   IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLG 62
           I K+ + ++VI + +    SQV    +++      V I N   D + + +HCKS D+DLG
Sbjct: 4   ILKTQVHVVVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLG 63

Query: 63  EQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKA 122
            + +   G + + FRT+  G TLF+CH  W      +  Y D+ +  R      +C W  
Sbjct: 64  LKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDI 123

Query: 123 DARGISNFNLSDAFFDKYY 139
             +G   F+ SD  F+  Y
Sbjct: 124 SIQGPCMFSESDHAFNICY 142

[Close]

BLAST of Lsi02G020450 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 36/138 (26.09%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 1   MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGE 60
           MG  ++C+L  V+ + ++  +S+ S  + +++      + G     +  HCKS+++DLG 
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMSRASTSVVIYND-----LGG--GLPLRHHCKSREDDLGY 60

Query: 61  QYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKAD 120
           Q +  G  + + F  + FGRTLF+C   W      +  Y  + + + +  G   C WK  
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIR 120

Query: 121 ARGISNFNLSDAFFDKYY 139
             G   F      FD  Y
Sbjct: 121 KNGPCKFYKKTGMFDHCY 131

[Close]

BLAST of Lsi02G020450 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-10
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 6   SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKS 65
           +CI   ++ IC +  L+      V G       +    ++ V ++NG      + +HCKS
Sbjct: 2   NCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKS 61

Query: 66  KDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDG 125
           K++DLGE  +     F WNF  N    T F+C++  + G++    +WD +      CG  
Sbjct: 62  KEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD-DVILFHRCGWK 121

Query: 126 HCRWKADARGISNFN 129
           +C W A   G+  +N
Sbjct: 122 NCIWTAKTDGLYLWN 135

[Close]

BLAST of Lsi02G020450 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 9.1e-10
Identity = 31/97 (31.96%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 33  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNE 92
           ++ V + NG      + +HCKSK+NDLG+  +     F WNF  N    TLF+C++  ++
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDD 99

Query: 93  GYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN 129
           G++  K +WD +      C   +C W A   G+  +N
Sbjct: 100 GHMNVKVFWD-DVILFHRCDWKNCVWTAKNDGLYLWN 135

The following BLAST results are available for this feature:

BLAST of Lsi02G020450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.2e-09	31.17	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	2.6e-09	29.50	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLS0	9.8e-09	27.41	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.3e-08	31.96	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q40975	2.2e-08	30.37	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]

BLAST of Lsi02G020450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4G8	7.5e-44	58.99	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333910 PE=3 SV=1	[more]
A0A5A7UAS5	4.8e-43	65.60	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A061DMI7	7.3e-23	42.98	S-protein homolog OS=Theobroma cacao OX=3641 GN=TCM_003121 PE=3 SV=1	[more]
A0A5N6QIK7	1.2e-22	43.10	S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002526 PE=3 SV=1	[more]
A0A5N6QH10	1.6e-22	42.24	S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002525 PE=3 SV=1	[more]

BLAST of Lsi02G020450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646226.1	5.8e-51	41.16	hypothetical protein Csa_016670 [Cucumis sativus]	[more]
XP_031745088.1	3.4e-43	56.95	S-protein homolog 3-like [Cucumis sativus]	[more]
KAA0050599.1	1.0e-42	65.60	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07841.1 pumilio-like...	[more]
EOX94034.1	1.5e-22	42.98	Uncharacterized protein TCM_003121 [Theobroma cacao]	[more]
KAE7997940.1	2.6e-22	43.10	hypothetical protein FH972_002526 [Carpinus fangiana]	[more]

BLAST of Lsi02G020450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	8.2e-11	31.17	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	1.8e-10	29.50	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	4.1e-10	26.09	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	7.0e-10	27.41	S-protein homologue 1	[more]
AT4G29035.1	9.1e-10	31.96	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 36..134 e-value: 2.2E-22 score: 79.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 26..125 coord: 134..169
None	No IPR available	PANTHER	PTHR31232:SF59	SUBFAMILY NOT NAMED	coord: 26..125 coord: 134..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G020450.1	Lsi02G020450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity