Lsi02G019530 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGTTGTTGTTTGAGAGTGTGATTTGAGTTCTTCCCCCATTTCTTTCTGAAGGGTTTCTGTTCAATTCTGTGTTGATTTGAAATGTTGGAGCAATTGGGGTTTGAGAAATTTGTTAATTTTTTTTTTTTTTTCCTTATGAATTGTGATTTTGCAACCCTTGGTTTTGTTGCTGAACAGATTTTATCAATTGGGCTCTTTTGTTTTACATGATTTCATTTGGTGATTGGTTGTGATGATCCTTTGTATGCTTTTAGGGGAATGGGAGCTAAAGTTGAGTGGTAGATTGTGTATTACTTGTTCTCCCCCTTTCGGTCTATTTTAGTACGAACTTTCATGCTTATTCTATTTTAGTCCTTGCATAATAGCCATTGTAGTTCTTACTGCTTGTGTATTTTTTCTATAAATTATTTAATAGAAACCAAATGTAGAAGTGGCAAACGCATCTTTTGTCAATTTACTTGGTCATTGGACTTCTAAAGTGGATAATGGATAAATGTTTCACAGGCATGCATATATATTTGCTCGATCAGTTGATGTCGTGTGTCTTAATGAAAAATTAGGGACAAGAATTAAAGTGGATCATTCAATCAAGACATTTGAAAGTTTAGGGGCCAAATGAAAGCTTATGGATCAGATAGGACTTAAACCAAGATTTAACTTTCGAATGAAACTCTTTGTTTGAGCATGGCATGGTGACTGCTATAGGTAAATGCTTAAGGGTCAAAGGGATTCTGAACTCCTGTTTGTATCTGATCCTTTAAAAATATTTCAAAAATTTGTCTGAAGAATACCCAAAAGTTCAACGTTGAAATCATATGTAATATGTTTCATCATTTAACCATAGAATTGTGTTAAGAAATAAATCTGCATTAATTGAACAGATATACTGGCTCAACTCCTTTTTGTTAACTATGCAGTGAAAAGTCAAGTTAGCTGATCTCTAGTAATCATGGAATGTTCTTAATAATTTAGTTCTTATTTTTTCCCTCATCTCTTGTTTATCTCCATGTTTGAACATTTTGAGCTCTGTGACGTCGGCCTATATAAGTGACCTTCAGTGTGCAATATGGTTTTCTTAGCTTCTTCTGGTTTACTGCATTATATATGTTATCGTTTGCCAAATACCAGTTACATTTTCAAATATTTTCCGTTTCCTTTATTAAGCTTCAAGGAATTTATATGCAAGGATATAACTGGGTAGATTCGGCTTGATTTTTGGCCAAAACTACTGCTAAACCAATCTACTGGTTTAAGGAAAATTGAAAACCAATGTCAAAATTGGCTTTTTTGAATAATTGAAGTGACTGTCTAACTAAAACTAAATGAAGCCAACACAACAAAACCTAACCAACTTGATTGAAACTAATAAAATCTATCAACACTGAACCGACTGATTAATATTTGGTTTTTTATTTTATTAAACTGACTGATCTAACTTGATTTGGTCAATTTTGTCTTTTTTTGGTTTCTTCATTTTCAGCTTGCTTCTCTCCCTAATATTGAATATTTCATTCCCCTTGAGATTGCAATTGTGCATGGGTGAATTCATCCTTTTTGCACTCCTTTAATGGTTATAATATGGGAAGGAACGAACCACCACGAGTTGGTTTAGTTTTCAGAAGGACTAGCTATTATAAACTTAGATGTTTTGAAGCTTATGGATTTGATTCTTGGTCGTTAGACGACCTACCTGGATATCAAATGACCTATCACATCTCCTAATGTTATAGTAGTTCATTTGATCAAATGAGGTGTTCATAAGTTACTCCAATTGTCTATTATCAGACAATGGGATGTTAAAGTTTTCTCCATTAGACATATTAGTTCTTTTTCTATAGGGTTCTAAATATTTAACTGTTATATTGACTGTAGTTCAATCATTTTACATAATCAAAGGTTTAAAAAAATGAGGTCAGGACTAGCGCGCTGCTGGTGTTCACTTTTCTTAATTACCTACTTGACTTCTTGGTCACTAGTTATGTCACCTCTAAATTGGGAAAGATGGGAGCCTCCCCCTCCCACAAGTAACAGGTTGGTGATGCTATTTGATAACGATCAAATAATGTTATCAATTGTATTTTTTGCCTTCTGATAGTGAGTGAAAAATTGAATATTTTGAGAAAACAATATATTTTCAGTTCAATTCTCATATAGACAATATATACATTCTTACATTTTCCTGAATTCAGTTCTCTTGTATTTTTTATTGCAGCATAATTGTACAAAAGTTTGAATCAGTTCAATTCTCATATAGACAATATATACATTCTTACATTTTCCTGAATTCAGTTCTCTTGTATTTTTTATTGCAGCATAATTGTACAAAAGTTTGAATCAAACTTTCTGATGATGGGCATGTTGCTGTTAAAACGAATCCCTGCAGTTTTGTATAGTGCATTAGTCTTCTTTGACATCTGAAATTGATAAAAGCCCCAAAATGGTTTTGATGTAATAACGTTAATAGACTCTTTAGATCAACCAGGAGGTCAGTGGTTGAAAACCTCTTCATGCTGCTTGTTAATCCTATGATTTTCATAACCAAATGGATTTCTTTTAAAGTGAGGTGGTGGTCTTTGAGTAAGAATGCAGTAATGTCGAATGGTCGAGGGAATTTAAGTTCAAACACGTTTTTATATGCTTGATTTTTGAAGCGGATGTTGTCAAGGGAGTTGAGTTCTGCTAATATATGGCGTGTACCAACATATCCTGTTCTTTTTGGCCAACAATCTGCTTTCATATATGGAATAATAGCGAGTTTTATTCACAATGTTCTCTTTTGGTTGGAAGAAACTCATAAGATTGATTTTAGTGTTGAGTCTACTGAGTATTTTTTTTTCTCCTCTTTTCCATCTCAGGAAGGTGCTGAGTATATCGTCAAAGTTCTGACTTTCTGTTATTTTTGTTCTTGACAATGATTTGCAGCTAGGAACTTGAGAGTAAGATCATTGGACTATAAATATGAGCCTGGCATGTCTTGTATGCAATAGCGTAGAGAGCCCTTCACACTCGTTTAGGAGCTATTCGGTTTCGAGTTCAGACAATGAGGGAAGATGTTCTGCAATGGCCAACTGCCTAATATGGAGACCATCTTTTCCTCCAACGCACCACCCGTCGTATGCAGCGTCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAATGTAATGGACGGTACGCCAAGGTTGGTGCGGAGCCGGGCAGTAAGAAGGGACCTGGTACGAGACTGGAATTTCGACGAGGTTGTTGTAGTTCAGCATTAGTATGTTTTACGTTGAGACGAGGAGAGTAAGGTCTTCAAATGGGCATGGGTGATGACCTGAAATGATGGGAGGGTAGCATCTTGCTTCCTATGTATTTTTGTTTTCTTATGGGTACAACTGAACTCACACTTCCACTGGAAGAGTTTGCACATTTGTAAGCATGAGAAAATGTGATTTAGAACTTTGTTTATATATAACCTACATACTACTGATTCATAGGAGGCAGAGTTGGGATGGGTTTAATTAGTTTTGTAAACTTGGATGGAATTGTGCTTTCAAAATTTTCGATGATATACACCAAGTTTATTTCATATAACAAGAAATAAGAAGTGTTGAATTTTTTTTTGTAGAAAAGGTCACATCTAAATCTTCTAAAATCTTGGTGCTGTGGCTGTGAAAGTCTTTGCCGCGCTGCGGTGCTAGGGTACAGTATTGCGATGCTACCTTGTTTTGCAGCTACGAGTTTCTAGTGTTGAGCCAAGCGTTGAGGTGCCACTTGCCCATCTTTTTTTTAGCATCTTTTTGCTCTTTTAAATGCATTAGGACCATTTTGCTCTTCCTAGGGTTCTTTCTTCAATAATTCTTCAAATTTTTTCTAATTATGCTCGATTCCTACAAGACCAATATAAAAGTGCATCAAACAACACGATTAACATATGAAAACTAACAAAAAAATCTAAAGCAAATAAAACACTTTCTAAAATGACTATTACTTATGGCACTTGGAGTGATCAAAATCATCTATCTGATGGAACCTCTAATCTTAAGGCTGATAGTATATAATTGATATCGGTTGAGCTATACTCTTTTTAGCGTCTTTATATTTGTTATCATAGTGAATGATGTGATTGATTAATAATTATTCTACGTACTTCCAATTAATCTTTAATAAAGTCCTCAAAGTTAATGTATATCTAAATATGTGAATATGTTTCTAAAATTTATAATAAAAAAATGCTAATTAGATAATAAAAAAGTTTTTGAAAAAGTCAACAATAAACTAGTTGTAGGGACTAAATTTAAGATTTATTGAAATTGAAAGTATAAGACTTAAAATTGAATAAATTTCAAAGTACGGAGGCCAAAATTGTATTTTAACATAAAAAAAAAGTCAATGTTATATGTTTAGTCCCTTAACATTGAGAGAGTTGTGTTGGTTTTTCAACTTTCAATATATTTAATAAGTTTTGAAACTTTCAATTTTGTGCATTTTAAATTTCTAAACTTTTAATTTTATGTCTAATAGATCCCTAACAAATTTAAAATTTTTTAAAAATCAATTAGTTAATTAGATATAAATTTGAATTTATGTCTAATAAAACACTAAACTTTCAATCATGTTTAGTAGAACTCTAAACTTTAAAAATTTAAAAATTTATGGACTAAATTTATAATTTTAAAAGTTTTAAGAAAAAAATAGATACAAACTTAAGGCACTCATTTTTAATTTAAGCAAGAATCAAATGAAGAATGTCTAGTCATTAGAGCACTATAGCAAATTAATAAAATATGAAAATATCTAGTCATTAGAGCACCATAGCAAATGAATCATGTACTTGCAAACAACTTTTCACCTCTCCCTTTGTGTAGTTAATTATTTGGGTTGTTTTTAAATATAGAAAAATGAGTTAAACTATTTATAAATACAGAAAAATTTTACTATCTATCACCGCGATAGAATTCTATTGAAAATTTTTTTATTATTAGCAAGATACATAAATGCACCTATTGCAGTTAGATATGGTATTTCATGACTAAGAAGTTCTTTACTATCTTCTCAAGGAAGAAGATATTCTTTCTTCACATCAAATGGACGAACTACCATTGAAATTTCAAATTGATTTGGTTTCTCTATGTTAAATTGTTTTATAAATTGATTGATGGATTAATATCCCATCAACTAGGCAAGACTTTATTTTTTTTCAATATCTTTCATCTCAAATTCTTTCTTAAAATCTTCTATCGTCTTTAATACTAAATTTTGATTTTGATTTCAACACATGGACAAGTAACGTTATTTTATATCATTCTTTCAACAAATATTCACTAAGAGATTATATCACATTCATGTAGATTGTTTTAATCCATATAAGAATCTTTGTAATCTGATCAAATGTGTACTCTCTTGTATTTGAATTATATGATTTTGGTATCTTCTATTCTTCCAGGATACAAATATCATTATAAAGAGGTCTATAAATATGTTGCAACTACATTTGTAAGATGCATGTCAAACTTTTCATCTACAACAAACCAATTAAATATCTAAATGTTATTATATCTACTACAAAAAAAAAAATGTCTTATCATAATCAATATTAAGCAATGCAATAAGTCAAGTCTTCCTTTACATCGTATCGACTCATTATTTTTATTTTTTTCTAACAAATACTCATTTGTATCCTAGAGAATTGGCATCTTCTAGTGTCTTGATTAATGGTCTAAAAACTTCACGTTTTGAAAATGAGTTTAATTTTACCATAATTGCTTCTTTTTATTTAAACCATTCTTTCTGTGTCAAGATACTTCGACAAATTTTGATTCATAATTACCTTTTATAGAAATAATATTATGAGCAAAAATGTTGTCAATAACTATATCATTGCGATTCCATCTTTTTTGAAATATTATTATTATCTTCAAATACACAACCTTCCTCAATAGTCTTATGAGTAGTCATGTTTAGGTTTTCTTTTGAAATATCTACATTCTCAATCAAACTATTTTGATTATTAACTATTCTTTTTCAAGGATTTTTATCTGACACCATTGGTCTACCATGAGTGTTTAGTCAAGCCAACTTGTGCATACCTTATTATTCTAAGAAGGACAACCACCTCACCCTAGTACATTTAGTTTTCAAGGTAACAACCACCTCACCCTAGTACATTTAGTTTTCAAGGTAACTCGTATGTCGGTCACATTAACAATGATGGTTTAGCCTTGCTAAAGTAAAATTTTCTTGAACAATTTACTCTAGACAACAAAAGAGAAAGCTATTGATGTAACAAAAACCAACAAAGCTGACCTTTGCCAATCTCCATCTTGGCTTTGCTAAGGAATCAATGCCCCAGAAAATCCACTCTTGGAAAGAAGTCCTGAGAGAAAACCTTTGTTACTGTTGTTGTTGTTGCTGTTCTTAAGATTGGTGTGGTTTAGTTTGTTTATGAGAGACCACTGTGTCTCAAAATCCAACTCATAACCACTTTCTTGCATTGCTCTCATTGTCTCTGATGCCTTTTCAAGATCGTTCTCATAGCAGTACCTGTTCAGAATGGAGCAATATGCATCCTTGCTTGGTTTTTCACCCATCTCTGTCATGCTCATCAAAACTCTTTCTGCTTCTTTTGTCTGCCCTTCTCTGCATAATAAGGAAACAAGTTTATCCCACGTCCCGATGCTTGGCTTTAAGCACCGGTCCAACATCTCGGTATGGAAATCTACTGCTTCTTCCAACTTCTTGTAGGTACAGCAACATTGAATGACAGAATCATAACTTGTAGCACTTGGGATGTTTCCTTTCTTAAGCATTATGTTTATAAGATTGATTGCCTTCAACCATCTTCCTCTCTGACAAAATTGCTTGATTATGTTATTGTAATCTACATGTTCAGGGACGAGACTCTTCTCAACCATTCTATTCAAAAAACATTCTGCTTCTTGAAGCTTACCATTTGAAATGAGACACTCTGCTATTGCATTCTGTACAGGTGAACTATGTATCCATCCCCTAGATTCCATCTCCCGGCTCAGCTCCAACACTTTGTCCAGCTGTCCAATATCACAAAGGTGGCTGATTACAGTATTCAAGCTTCGATTGCTAGGACGAAAGTCGTGTTGGATCATGGTAATGAGATATAACGTGGAACTGGAAAAGTCTTTGCACTTTGAAAATCCATATACTAGAAAATCATAGGTTACGTTATCAGGTATCAATTTCCTCTCATGTAATAGTTCGTCTGAAATTTTTTGCACAAGCAAACTGTTCCCGGTTCGAAAAATATAAAAAATAAGAATGTTATAGATAACACAGTCATGAGATGTGCTGTTTCTAAGCATGAGGTCCTTTAGATGCAATGCCTGGAGACTTCTTCCTTCCACACACATCAAACAAACTAATTTCTTGTAACTCGATATCGAAACGCTTAAGTCCTTCCTTACAGTAATGCCCAGTAGCTCCCGCACTTTATCGAAGTTTTTCACTTTGCAATGCCCTTGAACCAGATGATTATAAATCTCAGCATCTAGAGAAATACCTTTAGACAATATATCCTGGAGTAGAGGCAGGGTTTCTCTAACCTTCCCCATCATAAAGAAACCTTTCATTAGTGCACCAAACACCCTATGTGAAGAAGACGATAGCTTGGCAGTTCCGATCTCTTTTAATGCAATTGCGGTTTCATATCTACCAACCTTACATAATATAGGAATTAATAGAAGACAAACATCAACGGACGGAACCATACTCATAGCCATTATATCATTCAATACATTAATTGCTATTGAAATATTGTTCTCTTTACACAATCCAATGATAAGAAGTTCATATGCCTTTTGATCCAAGGAAAATCCGAGAGACATAAGCTCCTCTGCCAATACTAGTCCAATTGTGGCGAACCCTGCTTCCAAAAGCCTTTCAAGGAATATATAAAGTATATCCAACCTTGAATGTGGATAAGACACCAGCATGGTTTCGAGGAGGGAGAAAACTTCTTTGAGTTTTCCTTTCTTGCAAAGACAACTGATAAGTGATTTACAGTCATGCAACCCTGGAACCCAACCATCTTTCCGAGCTCTATCCCAACTACCAAGAAGATCACTTAAGTTTCCTGTTTTCCACAAACTATTTATCAGAGCCTTGTACGTTTCGTTTTCTATTTCTACGTTCATTTGGATCATTTCGTTTAGTATTCCAATTCCACTAGAAGTCAACCTGCTTTTGCTATATGCTTGCACAAGTAAATTTAAAGTCTCTGCTCCTAATTGAGCAATCATATATGGCCTTCTCTCCCAAACATCAACGACAGGTTTGATTCTGGAATTCAATTTACAATGGCTTTTCAATAAACCCATCAAACCTACTGAAGTTAGTTCTTGCCCCCATCGATCCATTTCAGCTGCCAACCCTAATACAGCTTTAGGGTCTCTGTTTTTGCACTCCTCGATTATAAGCAAATTAAAATCAGGTAATATTGACTCTTCAAGAACTTCGGTAAGTCTTTTCTCATATTCATCCACGTCAGTGTCCAAATAAAGCCCATTTCCAAGGGTATCGAAGAACTCTGTTTTAGAAACACCAGTATTGTTGTCTCTTTTCAACCTCACTGCTGAATCATTAAACCCCAAGAAAGAGAATATTCTGCACAATGGATCATCTACTGAAGAAAGTTGAATAAAACCATATCTTTCCATTTCAAGAACTATCTTTTTTGCTTCTTCAAATTGTCTAGCTTTGCAATAGCCTGCTAAAAGAATTCTGAAGGTCGATAAAGTAGGTTCAGTCCCCTGATCTACCATTTCAGCAAGAATGCCTTGGGCATTCTCCCAGAGGCCCTCCTTCAACATCTCGCTGA ATGGTGGACAATGAGGGAAGATGTTCTGCAATGGCCAACTGCCTAATATGGAGACCATCTTTTCCTCCAACGCACCACCCGTCGTATGCAGCGTCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAATGTAATGGACGGTACGCCAAGGTTGGTGCGGAGCCGGGCAGTAAGAAGGGACCTGGTTCAGTCCCCTGATCTACCATTTCAGCAAGAATGCCTTGGGCATTCTCCCAGAGGCCCTCCTTCAACATCTCGCTGA ATGGTGGACAATGAGGGAAGATGTTCTGCAATGGCCAACTGCCTAATATGGAGACCATCTTTTCCTCCAACGCACCACCCGTCGTATGCAGCGTCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAATGTAATGGACGGTACGCCAAGGTTGGTGCGGAGCCGGGCAGTAAGAAGGGACCTGGTTCAGTCCCCTGATCTACCATTTCAGCAAGAATGCCTTGGGCATTCTCCCAGAGGCCCTCCTTCAACATCTCGCTGA MVDNEGRCSAMANCLIWRPSFPPTHHPSYAASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQSPDLPFQQECLGHSPRGPPSTSR Homology
BLAST of Lsi02G019530 vs. ExPASy TrEMBL
Match: A0A1S4E3A0 (uncharacterized protein LOC103500045 OS=Cucumis melo OX=3656 GN=LOC103500045 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27 Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Lsi02G019530 vs. ExPASy TrEMBL
Match: A0A0A0K7X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290600 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 59/63 (93.65%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Lsi02G019530 vs. ExPASy TrEMBL
Match: A0A6J1INM3 (uncharacterized protein LOC111477165 OS=Cucurbita maxima OX=3661 GN=LOC111477165 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.2e-26 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Lsi02G019530 vs. ExPASy TrEMBL
Match: A0A6J1EX41 (uncharacterized protein LOC111439046 OS=Cucurbita moschata OX=3662 GN=LOC111439046 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.8e-25 Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Lsi02G019530 vs. ExPASy TrEMBL
Match: A0A6J1C1C6 (uncharacterized protein LOC111007477 OS=Momordica charantia OX=3673 GN=LOC111007477 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.2e-25 Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 0
BLAST of Lsi02G019530 vs. NCBI nr
Match: XP_016902709.1 (PREDICTED: uncharacterized protein LOC103500045 [Cucumis melo]) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27 Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Lsi02G019530 vs. NCBI nr
Match: XP_038898475.1 (uncharacterized protein LOC120086102 [Benincasa hispida] >XP_038898476.1 uncharacterized protein LOC120086102 [Benincasa hispida]) HSP 1 Score: 131.0 bits (328), Expect = 5.2e-27 Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Lsi02G019530 vs. NCBI nr
Match: XP_004139698.1 (uncharacterized protein LOC101218997 [Cucumis sativus] >KGN44437.1 hypothetical protein Csa_015635 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 3.4e-26 Identity = 59/63 (93.65%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Lsi02G019530 vs. NCBI nr
Match: XP_022976952.1 (uncharacterized protein LOC111477165 [Cucurbita maxima] >XP_022976953.1 uncharacterized protein LOC111477165 [Cucurbita maxima]) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Lsi02G019530 vs. NCBI nr
Match: KAG6592240.1 (hypothetical protein SDJN03_14586, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.6 bits (314), Expect = 2.2e-25 Identity = 61/68 (89.71%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of Lsi02G019530 vs. TAIR 10
Match: AT1G71865.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 6.8e-09 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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