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Lsi02G019270 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATTTTGGAGTCATGTGTGCCACCAGGCTTTAGGTTTCATCCAACTGAGGAAGAACTTGTTGGTTATTATCTCAAAAGGAAGATCAACTCACAGAAGATCGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGGTAATTAATTAATTTCATTTATTAATTCACAACATTCATATATAATCAAGTTTTTATTTTAGTGGACAGCATTAGCTTCAAACCCATATTATTATTATTATTATTATTATTATTTTAAATCTTCATTATTTTTCAAACACAATCTATTTCCCCTACTTGGACTTTCTCATTCACTCTATAAAAACTAGACTCCACTTTTTTAATTAACTTTCAAACATTTTGAAAGCTTGAGTTTTTTTTGCCTTGTTTTCATACTACTTTTTGTTATGCTTGCAATCAAATGCAATCCACTTTGTTTGTAATAATCCACTCTTCATGACTATGGTTCAACCATTCAAATTCAAAGGTTGATAAAACAAAAAAGAAAAAATAGTAATTTTTTTAAAAAAAATTTCACTTTCCCTTATACACTAGGCTAAATTTCAAGTTTATAAAATTTTTCTTAAATATTTTTAAATATTGGCTCGACTTTTAAGAAGTGGGACGATTTATAAACTTAATTTTAAAAAATAAACAAAATAGTTACGATAGTTTAATAAAACAACTTTCAAATCAATAATTTGAGCAATTGAATGAATTAAGAAGTATTTCTTAATCTACACCAATCTAACAAACCCTAACATATATTCTGTTAGTAATTTTTTTTTTTATTTTACTAATACTCTTTGAAAGATTTAAGAAACACTAATTAACCAATTAATTGCATGTTTTATTTGAAGTGATTATTATATTCTAACTCTATAGTCTAATAATTAGGTATTCTTCTACTAGTTAGTTTCTCTTATATTGTCAAAAGTCGTATCAAACTCACTCTTAAATTTAACAAATTGTGCAGCTAATTGTAAATTTGGTTACGAGGAGCAAAAGGAGTGGTACTTCTTTAGTCATAAAGACCGAAAATACCCGACGGGAACTCGAACGAACCGAGCTACAAGTGCTGGATTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGAATGAGAAAAACATTGGTGTTTTATAAAGGTCGAGCTCCAAATGGAAGAAAAACTGATTGGATTATGCATGAATATCGTCTTCAAACCTCTGAACTTGCACCAATTCAGGCAAGTCTTCTTTAATTAACTTGTCAATTCTAAATCAAAATGAAGCATAGCTTTGGAAAGCACCCACTTTTTTTTTTTTAAAAAAATAAATAAATAAATAATATTCCAAGAAAGGAAACGTTTGTTTAAGAGATGTACTTTTGACTTTCATGTTGTATATTATTTCTCTCGTTTGATGACTATTTATAACTAATTTAGTTTTGTTTTTGAAGATTATGTTTTTTTTTTTTTCTTCATAATTTCTTACTCATGGTTTTCATATTTTTTATATAAATCTTTGATTTCTTTGACCAATTTTCAAAAATTAAGACAAGTTTTAGAATTTTTTTATTTTTTTTTTTGAAGATTATGTTTTTTTTTTTTTCTTCATAATTTCTTACTCATGGTTTTCATATTTTTTATATAAATCTTTGAATTCTTTGACCAATTTTCAAAAATTAAAACAAGTTTTAGAATTTTTTTATTTTTTTTAGTTTCTAAATTTTGGTTTTGGTTTTGATTTTTAAAACGTTGATATTGAAAATGTAGACAACAAAATATATAAACATATAGATGGAAGTTGTGTTTATAGACTTAATTTTAAAAAACGAAATGCTTATATATCAAACAAGCTCTTAGTTTTTTATTTTTGGTTTTTGAAAATTAAGCTTATAAAACACTAAATTCCAACTGTTTGATTTATTTATTTTGTTTTCTACCTTTTGGTAAGGTTTTTAAAATCAGACTAAGATTTTGGAAACTAAAAGAAATATTTTTAAGTTTTTGTTTTTGAAATTTTACAAAGAATAAGTGTTGAAATGGTAAGAAAAGAAGCATATATAATATTCAAAAACTAAAAACTAAAAACAAAAAAATCAAATAGTTATCCAAAGAAACTTAACAATTTGGTTAGTAACACTAAATTATTTTATTTTCCAAAACAAACCAATAACAAAAAATTATTTTTATAGATAAATTTTTATTAAAATAATCTAAATCATGAGATCTCTAGAATTAAAAGTGGTTCAAATGATTTCTAAATCCACTTTTGTTGTTTCAATAAGACTTTTAGATAGTTGATTTTTCGATTTTAAAAAATACATAATATAACTCAAAATTTTTATAGATATGTCAACCTAGTTGAGATGTTCGTATATACCTGCTAATCTTTTTTTCCATTAGTTTCTTTGTTTCGAAAAAATAACTCAAGATTTTTGTTCGATATATGCAGGAAGAAGGTTGGGTGGTTTGTAGGGCATTCAAAAAGCCAAGCCCTAATCAAAACCAAGTCATTGGAGCTTGGAATAATAGCTATCAACATCAAGCCTTATATTATGATCTCAAGAACAACAATAATAATAGTCAATTTGTTAGGTCCCCTTCATTTTCAGATGCCATGACTCCTCACACTCACATGGTCAATTCCTCAGACCAACACCTCTCAAATCTGCACAACCCCTATGCCTCTAATCTTCACCATCAACAACAACAAAATTACCAGTTCGTCCAGCTCCCGAATCTCGAGAGCCCGACGCTCTCGACGAGCTTTGGAACTAACGAAACAAAGATAAATAACAACAATGACAATCCTGACGGTCCGTGCCTCGAATGGAATGTTGATTTGGACGACTTTCTCTCTTCGTCGCAGACGATTGTCGAAATGTCGCCTTGTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATGTATGA ATGGAGATTTTGGAGTCATGTGTGCCACCAGGCTTTAGGTTTCATCCAACTGAGGAAGAACTTGTTGGTTATTATCTCAAAAGGAAGATCAACTCACAGAAGATCGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGCTAATTGTAAATTTGGTTACGAGGAGCAAAAGGAGTGGTACTTCTTTAGTCATAAAGACCGAAAATACCCGACGGGAACTCGAACGAACCGAGCTACAAGTGCTGGATTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGAATGAGAAAAACATTGGTGTTTTATAAAGATGCCATGACTCCTCACACTCACATGGTCAATTCCTCAGACCAACACCTCTCAAATCTGCACAACCCCTATGCCTCTAATCTTCACCATCAACAACAACAAAATTACCAGTTCGTCCAGCTCCCGAATCTCGAGAGCCCGACGCTCTCGACGAGCTTTGGAACTAACGAAACAAAGATAAATAACAACAATGACAATCCTGACGGTCCGTGCCTCGAATGGAATGTTGATTTGGACGACTTTCTCTCTTCGTCGCAGACGATTGTCGAAATGTCGCCTTGTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATGTATGA ATGGAGATTTTGGAGTCATGTGTGCCACCAGGCTTTAGGTTTCATCCAACTGAGGAAGAACTTGTTGGTTATTATCTCAAAAGGAAGATCAACTCACAGAAGATCGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGCTAATTGTAAATTTGGTTACGAGGAGCAAAAGGAGTGGTACTTCTTTAGTCATAAAGACCGAAAATACCCGACGGGAACTCGAACGAACCGAGCTACAAGTGCTGGATTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGAATGAGAAAAACATTGGTGTTTTATAAAGATGCCATGACTCCTCACACTCACATGGTCAATTCCTCAGACCAACACCTCTCAAATCTGCACAACCCCTATGCCTCTAATCTTCACCATCAACAACAACAAAATTACCAGTTCGTCCAGCTCCCGAATCTCGAGAGCCCGACGCTCTCGACGAGCTTTGGAACTAACGAAACAAAGATAAATAACAACAATGACAATCCTGACGGTCCGTGCCTCGAATGGAATGTTGATTTGGACGACTTTCTCTCTTCGTCGCAGACGATTGTCGAAATGTCGCCTTGTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATGTATGA MEILESCVPPGFRFHPTEEELVGYYLKRKINSQKIDLDVIIDIDLYKMEPWDIQANCKFGYEEQKEWYFFSHKDRKYPTGTRTNRATSAGFWKATGRDKAVLSKNRVIGMRKTLVFYKDAMTPHTHMVNSSDQHLSNLHNPYASNLHHQQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNDNPDGPCLEWNVDLDDFLSSSQTIVEMSPCSYPNLPQTFVDFCNDV Homology
BLAST of Lsi02G019270 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.7e-54 Identity = 127/276 (46.01%), Postives = 148/276 (53.62%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy Swiss-Prot
Match: Q9SL41 (NAC domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=NAC037 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.9e-53 Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy Swiss-Prot
Match: O65508 (NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51 Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy Swiss-Prot
Match: Q9FH59 (NAC domain-containing protein 105 OS=Arabidopsis thaliana OX=3702 GN=NAC105 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49 Identity = 89/114 (78.07%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy Swiss-Prot
Match: Q9FWX2 (NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 SV=2) HSP 1 Score: 189.5 bits (480), Expect = 4.2e-47 Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy TrEMBL
Match: A0A0A0K4F0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G273640 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109 Identity = 214/310 (69.03%), Postives = 221/310 (71.29%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy TrEMBL
Match: A0A6J1FFG1 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111443466 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 8.1e-94 Identity = 197/300 (65.67%), Postives = 204/300 (68.00%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy TrEMBL
Match: A0A6J1IIC0 (NAC domain-containing protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111477167 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 2.0e-92 Identity = 195/300 (65.00%), Postives = 203/300 (67.67%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy TrEMBL
Match: A0A6J1DTW7 (NAC domain-containing protein 30-like OS=Momordica charantia OX=3673 GN=LOC111023457 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 4.4e-76 Identity = 171/300 (57.00%), Postives = 186/300 (62.00%), Query Frame = 0
BLAST of Lsi02G019270 vs. ExPASy TrEMBL
Match: A0A5D3E6Y0 (NAC domain-containing protein 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00880 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Lsi02G019270 vs. NCBI nr
Match: XP_004149423.1 (NAC domain-containing protein 30 [Cucumis sativus]) HSP 1 Score: 405.2 bits (1040), Expect = 3.7e-109 Identity = 214/310 (69.03%), Postives = 221/310 (71.29%), Query Frame = 0
BLAST of Lsi02G019270 vs. NCBI nr
Match: KAE8646149.1 (hypothetical protein Csa_015564 [Cucumis sativus]) HSP 1 Score: 405.2 bits (1040), Expect = 3.7e-109 Identity = 214/310 (69.03%), Postives = 221/310 (71.29%), Query Frame = 0
BLAST of Lsi02G019270 vs. NCBI nr
Match: XP_038899845.1 (NAC domain-containing protein 30-like [Benincasa hispida]) HSP 1 Score: 377.5 bits (968), Expect = 8.2e-101 Identity = 205/311 (65.92%), Postives = 213/311 (68.49%), Query Frame = 0
BLAST of Lsi02G019270 vs. NCBI nr
Match: XP_022937049.1 (NAC domain-containing protein 30-like [Cucurbita moschata] >XP_022937050.1 NAC domain-containing protein 30-like [Cucurbita moschata]) HSP 1 Score: 353.2 bits (905), Expect = 1.7e-93 Identity = 197/300 (65.67%), Postives = 204/300 (68.00%), Query Frame = 0
BLAST of Lsi02G019270 vs. NCBI nr
Match: XP_023554182.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.9 bits (899), Expect = 8.3e-93 Identity = 197/301 (65.45%), Postives = 203/301 (67.44%), Query Frame = 0
BLAST of Lsi02G019270 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 ) HSP 1 Score: 213.4 bits (542), Expect = 1.9e-55 Identity = 127/276 (46.01%), Postives = 148/276 (53.62%), Query Frame = 0
BLAST of Lsi02G019270 vs. TAIR 10
Match: AT2G18060.1 (vascular related NAC-domain protein 1 ) HSP 1 Score: 209.5 bits (532), Expect = 2.8e-54 Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Lsi02G019270 vs. TAIR 10
Match: AT4G36160.1 (NAC domain containing protein 76 ) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52 Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Lsi02G019270 vs. TAIR 10
Match: AT5G66300.1 (NAC domain containing protein 105 ) HSP 1 Score: 198.0 bits (502), Expect = 8.3e-51 Identity = 89/114 (78.07%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Lsi02G019270 vs. TAIR 10
Match: AT1G12260.1 (NAC 007 ) HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48 Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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