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Lsi02G019260 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTTCGAGGAATGTGGGGGTGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGAGCTAGCGGCGGCTCTCGGCATCTTCCTTATCTGCTTCACTGGCCTTGTCTGTGTGTACTTGACGATGCCTTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACGCTTTCGGATCTTCGGGTGCTTAAGTATGTGTTCTTCTCTTCGGCTCCTTTTCGTGTGTGA ATGGCGGCTTCGAGGAATGTGGGGGTGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGAGCTAGCGGCGGCTCTCGGCATCTTCCTTATCTGCTTCACTGGCCTTGTCTGTGTGTACTTGACGATGCCTTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACGCTTTCGGATCTTCGGGTGCTTAAGTATGTGTTCTTCTCTTCGGCTCCTTTTCGTGTGTGA ATGGCGGCTTCGAGGAATGTGGGGGTGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGAGCTAGCGGCGGCTCTCGGCATCTTCCTTATCTGCTTCACTGGCCTTGTCTGTGTGTACTTGACGATGCCTTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACGCTTTCGGATCTTCGGGTGCTTAAGTATGTGTTCTTCTCTTCGGCTCCTTTTCGTGTGTGA MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSAPFRV Homology
BLAST of Lsi02G019260 vs. ExPASy Swiss-Prot
Match: Q8L586 (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At4g09580 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.3e-17 Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Lsi02G019260 vs. ExPASy TrEMBL
Match: A0A0A0K623 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G273650 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.8e-35 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Lsi02G019260 vs. ExPASy TrEMBL
Match: A0A1S4E3J1 (uncharacterized membrane protein At4g09580-like OS=Cucumis melo OX=3656 GN=LOC103500434 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34 Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Lsi02G019260 vs. ExPASy TrEMBL
Match: A0A5A7U377 (Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G001030 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34 Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Lsi02G019260 vs. ExPASy TrEMBL
Match: A0A6J1EEH6 (uncharacterized membrane protein At4g09580-like OS=Cucurbita moschata OX=3662 GN=LOC111433391 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34 Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Lsi02G019260 vs. ExPASy TrEMBL
Match: A0A6J1IUC8 (uncharacterized membrane protein At4g09580-like OS=Cucurbita maxima OX=3661 GN=LOC111480654 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34 Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Lsi02G019260 vs. NCBI nr
Match: XP_031745009.1 (uncharacterized membrane protein At4g09580 [Cucumis sativus] >KGN44374.1 hypothetical protein Csa_016650 [Cucumis sativus]) HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Lsi02G019260 vs. NCBI nr
Match: XP_038900052.1 (uncharacterized membrane protein At4g09580 [Benincasa hispida]) HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34 Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Lsi02G019260 vs. NCBI nr
Match: XP_008461958.1 (PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo] >XP_008461960.1 PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo] >XP_016902793.1 PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo] >KAA0048737.1 putative membrane protein [Cucumis melo var. makuwa] >TYK31598.1 putative membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34 Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Lsi02G019260 vs. NCBI nr
Match: XP_022926209.1 (uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_022926211.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_022926212.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_023521319.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023521320.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023522459.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023522460.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.8 bits (390), Expect = 3.5e-34 Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Lsi02G019260 vs. NCBI nr
Match: KAG6607628.1 (putative membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037228.1 putative membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153.7 bits (387), Expect = 7.7e-34 Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Lsi02G019260 vs. TAIR 10
Match: AT4G09580.1 (SNARE associated Golgi protein family ) HSP 1 Score: 89.4 bits (220), Expect = 1.7e-18 Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Lsi02G019260 vs. TAIR 10
Match: AT1G71940.1 (SNARE associated Golgi protein family ) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-18 Identity = 42/81 (51.85%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Lsi02G019260 vs. TAIR 10
Match: AT1G71940.2 (SNARE associated Golgi protein family ) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-18 Identity = 42/81 (51.85%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Lsi02G019260 vs. TAIR 10
Match: AT4G17790.1 (SNARE associated Golgi protein family ) HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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