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Lsi02G019220 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATACAAAGATGAGTTTTTCTTCATTCACCTTGTATCTTGTTTTATTGTTCACAATTTCTCTGAATTTGCTTCTTACTTCGGCGAGAATATCCGACAAATCCACCTCTAACATTGATGTACCATCATCATTGCATCTCGTTTACACCATCGAGAGGCCTAGCAATGAGAAACCTAAGGCATTTTACATCCAAATCCTAGCTTCTGTTCTTGGCAGGTATGTTTTTCATGAAAAATTATTCAAAGAAATTGCCACAATGTGTTGGACGATAATTATTCAATCAGATCACCACAATAACGTTCACAGTTTTGCACGGTTGGATGTAGATTCTAAAATTTGCAAGCTCCTAATAACCACGAGATACAAATTTGATAAGCTTTTAATGTTTGTCTCAAATGTCAAAATAGTTTAAGGCGCTCTCTTCAAATTAGTTCTCATCGCTCATCGTGGTTAATTGTTAGGAGCATCCACATCGAGACGATCTGTCATCGAATAATTTTTTGTTTTCTAAATATTCCTTTGCGTGAAATGATCCTGGGATAATTTAGGGTGAATTTTTGTGTCATTTTGTTGCTTTGTTGCAGTGAAGAAGCTGCTAAGAAAGCTCTTGTGTATAGTTTCAAGAGTTCCATGAGTGGCTTTGCAGCTAACCTGACTCCCGATCAAGTCAAGAAAATTTTGGGTAACTATCACTCTATGATTTTATTATCATTATTATTATTAACAACTTTAGAATATGATTAGATATTCCCTCACATTTTATATTTTGGGACTTTGGCAGCCCAACCAGGAGTTCTACATGTTGCACAAAGTGTTAACTATGATTTAACAGGAGGAAAAAGGAATAATGATGTATAGAACTTCAATTTCTCTATTCAAATATGAGTTTGTTGGTTAAATAGGTAAGTTAAATCGTAAATTTGATTCCTATAATTTGGAGAAAGTTAAAATTTAG ATGGCAAATACAAAGATGAGTTTTTCTTCATTCACCTTGTATCTTGTTTTATTGTTCACAATTTCTCTGAATTTGCTTCTTACTTCGGCGAGAATATCCGACAAATCCACCTCTAACATTGATGTACCATCATCATTGCATCTCGTTTACACCATCGAGAGGCCTAGCAATGAGAAACCTAAGGCATTTTACATCCAAATCCTAGCTTCTGAGCATCCACATCGAGACGATCTTGAAGAAGCTGCTAAGAAAGCTCTTGTGTATAGTTTCAAGAGTTCCATGAGTGGCTTTGCAGCTAACCTGACTCCCGATCAAGTCAAGAAAATTTTGGCCCAACCAGGAGTTCTACATGTTGCACAAAGTGTTAACTATGATTTAACAGGAGGAAAAAGGAATAATGATGTATAGAACTTCAATTTCTCTATTCAAATATGAGTTTGTTGGTTAAATAGGTAAGTTAAATCGTAAATTTGATTCCTATAATTTGGAGAAAGTTAAAATTTAG ATGGCAAATACAAAGATGAGTTTTTCTTCATTCACCTTGTATCTTGTTTTATTGTTCACAATTTCTCTGAATTTGCTTCTTACTTCGGCGAGAATATCCGACAAATCCACCTCTAACATTGATGTACCATCATCATTGCATCTCGTTTACACCATCGAGAGGCCTAGCAATGAGAAACCTAAGGCATTTTACATCCAAATCCTAGCTTCTGAGCATCCACATCGAGACGATCTTGAAGAAGCTGCTAAGAAAGCTCTTGTGTATAGTTTCAAGAGTTCCATGAGTGGCTTTGCAGCTAACCTGACTCCCGATCAAGTCAAGAAAATTTTGGCCCAACCAGGAGTTCTACATGTTGCACAAAGTGTTAACTATGATTTAACAGGAGGAAAAAGGAATAATGATGTATAG MANTKMSFSSFTLYLVLLFTISLNLLLTSARISDKSTSNIDVPSSLHLVYTIERPSNEKPKAFYIQILASEHPHRDDLEEAAKKALVYSFKSSMSGFAANLTPDQVKKILAQPGVLHVAQSVNYDLTGGKRNNDV Homology
BLAST of Lsi02G019220 vs. ExPASy Swiss-Prot
Match: F4HPF1 (Subtilisin-like protease SBT3.4 OS=Arabidopsis thaliana OX=3702 GN=SBT3.4 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy Swiss-Prot
Match: Q8GUK4 (Subtilisin-like protease SBT3.13 OS=Arabidopsis thaliana OX=3702 GN=SBT3.13 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.2e-06 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy Swiss-Prot
Match: Q9MAP7 (Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana OX=3702 GN=SBT3.5 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 6.8e-05 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy Swiss-Prot
Match: Q9SVT4 (Subtilisin-like protease SBT3.14 OS=Arabidopsis thaliana OX=3702 GN=SBT3.14 PE=3 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 5.8e-04 Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy Swiss-Prot
Match: Q9MAP5 (Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana OX=3702 GN=SBT3.3 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 7.5e-04 Identity = 35/105 (33.33%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy TrEMBL
Match: A0A0A0K630 (Inhibitor I9 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G274680 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.0e-40 Identity = 99/136 (72.79%), Postives = 112/136 (82.35%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy TrEMBL
Match: A0A5D3C9P1 (Subtilisin-like protease SBT3.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001980 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 97/136 (71.32%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy TrEMBL
Match: A0A1S3CFT4 (subtilisin-like protease SBT3.4 OS=Cucumis melo OX=3656 GN=LOC103500439 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 97/136 (71.32%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy TrEMBL
Match: E5GCJ1 (Peptidase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31 Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Lsi02G019220 vs. ExPASy TrEMBL
Match: A0A6J1IUK8 (subtilisin-like protease SBT3.6 OS=Cucurbita maxima OX=3661 GN=LOC111480709 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.8e-20 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 0
BLAST of Lsi02G019220 vs. NCBI nr
Match: XP_038896488.1 (subtilisin-like protease SBT3.13 [Benincasa hispida]) HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42 Identity = 106/136 (77.94%), Postives = 113/136 (83.09%), Query Frame = 0
BLAST of Lsi02G019220 vs. NCBI nr
Match: XP_038896487.1 (subtilisin-like protease SBT3.13 [Benincasa hispida]) HSP 1 Score: 179.9 bits (455), Expect = 1.5e-41 Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of Lsi02G019220 vs. NCBI nr
Match: XP_008461963.1 (PREDICTED: subtilisin-like protease SBT3.4 [Cucumis melo] >KAA0048207.1 subtilisin-like protease SBT3.4 [Cucumis melo var. makuwa] >TYK08050.1 subtilisin-like protease SBT3.4 [Cucumis melo var. makuwa]) HSP 1 Score: 171.4 bits (433), Expect = 5.3e-39 Identity = 97/136 (71.32%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of Lsi02G019220 vs. NCBI nr
Match: ADN34190.1 (peptidase [Cucumis melo subsp. melo]) HSP 1 Score: 146.0 bits (367), Expect = 2.4e-31 Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Lsi02G019220 vs. NCBI nr
Match: XP_038896852.1 (subtilisin-like protease SBT3.6 isoform X2 [Benincasa hispida]) HSP 1 Score: 118.2 bits (295), Expect = 5.3e-23 Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Lsi02G019220 vs. TAIR 10
Match: AT1G71950.1 (Proteinase inhibitor, propeptide ) HSP 1 Score: 75.1 bits (183), Expect = 4.8e-14 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of Lsi02G019220 vs. TAIR 10
Match: AT1G32950.1 (Subtilase family protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
BLAST of Lsi02G019220 vs. TAIR 10
Match: AT4G21650.1 (Subtilase family protein ) HSP 1 Score: 52.0 bits (123), Expect = 4.4e-07 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of Lsi02G019220 vs. TAIR 10
Match: AT1G32940.1 (Subtilase family protein ) HSP 1 Score: 48.5 bits (114), Expect = 4.8e-06 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of Lsi02G019220 vs. TAIR 10
Match: AT1G32960.1 (Subtilase family protein ) HSP 1 Score: 45.1 bits (105), Expect = 5.4e-05 Identity = 35/105 (33.33%), Postives = 55/105 (52.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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