Lsi02G018680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G018680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Upstream activation factor subunit spp27-like
Location	chr02: 24442793 .. 24447289 (-)
RNA-Seq Expression	Lsi02G018680
Synteny	Lsi02G018680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTCTTTCTACTCTCACAGAAAAGAGAGAGAAAGGAAGAAGCAGAGACATAAAGGGAGAGAGAAAGAGAAGCAGAGAGAGAGACAGAGTTCTTGAGAGAGAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGATCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACTAACCCTAACCCTTTTTCTTCCTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAGGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCTCATCACCACCACAACCACCACCAGCACCAGCACCAGCACCACCATCATCATCAACAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCGCCGCCTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTAGTTTTTTCAATTTTGGGGTTTTGGGGGGGTTTTTTGGTTTTCCCTTTTGATTTACTTGTTGTTTGTTTTGGGTGTGTATGTTTAATGTTTGTGCAAATCTGTTTCAATTCTGGAGTGAAGTTGATTTCGTTCTGTTTTGGTTGCAATTCTACTGAATTGGTGGAAGGGCTTCTCGATTTCTTTATTTATCCCTTTTCCTTCTCTGCAACGGTTACTTCAATAGTTCAGAATTAGGGCCGAAAAGGCAGTGAAGTTGTTTGTTTACTTGTTGTGAACTGTGTCGAGAGGGTTTTGGAGTGTATAGTTCACTAAATAGTGGCAGTTGGGTTGGTCTTAATCTTACTCGAGGGTTCAATATTGTTAATTTTCTATTGAATGTTGGCTAGCTTCTGCTTTGTTTTCCTCTGGGTTTAGAAGTTTACTCAGGATTTCTGGTCACAAATGTGACTTTCTGCTTTTGTCATGGCTGTTGGAAAAGTAAATTTCCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAGATATCTACTACGAGCATGTTGAGTTTTCATTTATTTTCTGTTTGTTTTCTTTAAATCGTATTATTTCTACATTCTTGTTGCTAGTCTGGTCAGCACAGCCATACGCCATATATGGACAAAAATTCTCTTGGGAATTTGTGACTTTGGATTTGTGCATCAGCACGGAAGTGGATAGGTAGGAAGTTAATTTGAGGAGAGATGGAAGCTACCCTAGTTTACTGGAAATAGATATTGATATATGGCATCTACATGTGAGGAGTCTTTATCGTGTATATGCACTTTTCTATAAATATCACTGTAATTTTGACCTCTTAGCACACTTTTGAAAGTGACTGGCTAGCTCCTTACTAATCTGGGCTTTCTTTTATTGTGAAATCTAGTAATGTAGCTTAGAGCTTGTAATCTTGTTGAATCTATTATCAGCTGGTAGCCATAAGTATGGAACATTTTGTTGTGTACTATAGAGCTATGAAGCAGAATCTCTCAATTAGTTTTCATTCCATGGGAGGGTGAAATCTATCATTCCTGTTTTATTCAGAGTTTAAAACAATATATGTTTCTCTAATTGTTAGAACCCTAATATGTATGTTTGACTGATAAAATCTCACCTTTACAACTTGAAAGCAGTACCCAGACCAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAACCAGAATTGCCAAGAACTGAGGTTTCTATCTCTTTCTTATTTCATAGTTGTTTGATTCTCAATTTTAGTACTTATGAGGTTCATATGATGCTTCTGGGTTTGGTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATCCAGTTTGATGCTCCCCCATCCCCCTAGTTCTGGAAGAAATCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTGCAGTTGGTGTAAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGGTTATATCTGAAGCTCTAGCAAATTTTTTTGGTGTCGATGGAAGGGAAATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAATTTTCACTTTGTTGCATGCTAACCATTCACTATGTATTTAGTCTATCCATCGTAATATGAAAAATACTTTCCATGAATTTCCATCATACTTTTTGAACTTTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTCTGCATACTAATCATGGGATGTTGTTCTCCTAACAACTTTCTTTTCCCCATTATCATTCACTTACATTGAAACGTTCTTGTACTCATACGTTTTGGGATCTTAAAAACAGGACCCTTTGAACCCGATGGCGGTCTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGATAGCTAATCTTCTAGGATGGTTAGTACATTCAAACTTTCTTCTATATTAAAACTGATGTTTGAGTTGATGGGTAATTTTGTGTGTCCCCATTGTTGCAATTTAACCTCCTTGTCAACTTCATCATCATCATGCACATTTTCCACAAGCATATTAGTGTTGGAGGCTGCTGATTAGTTAACCTGTTATCACTTGTCCTAGTTGAAAATTTCTTAGTTTTATGACTGGTCTGTGGGAACCTTCCATCAAATTTTGTTCTTGTACCGTTTGCTAGGAAAGATGGCAGGATAAAGAGAAAATGAAAGGAAAAACTGTAGAATTGTTTGTTATTAACCCCATAGAAATTCACCTAGGACTCAACTTGAAACACAAGCCTTGAAATAGTAAATATCTACTAGAAACTGTTTATTCTGATTTTTACTGTGCCATCTGGAAAGGATAAGAGCGCATGTAATTCACCTAAGGTATTAAACTAGGACTTTGAAATTTAATTAGAAATAGAAATTCAAGTTAAAATTGGGGTTTTGGAGGTCTCTTATCTATATTGGTCTCCGCAGAACAAATATGAAAATTTAAAATATATTGAAATATAGTAATTACTGCTACACGCTACTCCTGAATGAATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTATAAATGAAGAAAACACAATGATTTGAAGCTTTAATTTGTGCAATCATAGCTTTTCACCCTTCAAGGTCCCGTTTGACAACAAATTTTTTTTTTTTCAATTAAGCTTATAAATGTTATTCCCACTTGTGAGTATCATTATTTTGTTATCTACTTCTACAAATATTTTCAAATCTAAGACATGTTTTAAAACTTAAAAGAAATAGTTTTTCCAAATTTGTTTTTGTTTTTGGAATTTAATTATTTGTTCAAGAGAGATAAAGTCCTAGTAAAGTAATTGTGAGAAAATAAGCCCAATTTTAAAAAACTGAAAACTAAAACTAAAAACTATTATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACTGTTGTTTTCTTTTTTCCTTTTCAAAAAAAAGAACCGAAGGATTAGCTTCTTTCTGACTGCTTTTTCCAGCAGTGCCAGCTGTGCTGCATACTTACTTTACCTTTAGTTGAAGAATTTGTTTCTTCTTCTTTTTCTTTTTCAAAAAGCATAAAAAAATAGATTAGCCAGGACAAACTAATGAGTGCTGATCCTTGATTGCAGTTGCGGATCGAATGGTGTTAGCGACTTACATATTGGGGCAGTGTTTGGAAAAGTCTATATGGTTTTTTTCCTCCCCTTTCTTAATATTGTAATCAGTGATGATAATATTTTACTTTTGGATCTTATGCTAAGGTAAGGTGTGAACTTGGGGATGTAAGATGGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCAAGTCCTTGGGTTTCCATTTGTCTGACTTGGTGTTTAGGTTAGAGTGACCCTGGGAGTTTCTAACATCCATCATACACTACAGATGATGGGTAAAGTAAAATTATGTTATCTACTCACTAGTTTGTTAAATATATATGTTTTTATGTAGTAAAAGTTTAGCCTTCTTTACTTTGCTTTCTTTTGTTACTGTTTGTGGAAAAAGGCTTGTTGAAGCTCTGTTACCTTATATTTAATAGTATCTTCATATTCATACA

mRNA sequence

TTTTGTCTTTCTACTCTCACAGAAAAGAGAGAGAAAGGAAGAAGCAGAGACATAAAGGGAGAGAGAAAGAGAAGCAGAGAGAGAGACAGAGTTCTTGAGAGAGAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGATCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACTAACCCTAACCCTTTTTCTTCCTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAGGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCTCATCACCACCACAACCACCACCAGCACCAGCACCAGCACCACCATCATCATCAACAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCGCCGCCTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGTACCCAGACCAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTGCAGTTGGTGTAAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGGTTATATCTGAAGCTCTAGCAAATTTTTTTGGTGTCGATGGAAGGGAAATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGACCCTTTGAACCCGATGGCGGTCTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGATAGCTAATCTTCTAGGATGTTGCGGATCGAATGGTGTTAGCGACTTACATATTGGGGCAGTGTTTGGAAAAGTCTATATGGTTTTTTTCCTCCCCTTTCTTAATATTGTAATCAGTGATGATAATATTTTACTTTTGGATCTTATGCTAAGGTAAGGTGTGAACTTGGGGATGTAAGATGGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCAAGTCCTTGGGTTTCCATTTGTCTGACTTGGTGTTTAGGTTAGAGTGACCCTGGGAGTTTCTAACATCCATCATACACTACAGATGATGGGTAAAGTAAAATTATGTTATCTACTCACTAGTTTGTTAAATATATATGTTTTTATGTAGTAAAAGTTTAGCCTTCTTTACTTTGCTTTCTTTTGTTACTGTTTGTGGAAAAAGGCTTGTTGAAGCTCTGTTACCTTATATTTAATAGTATCTTCATATTCATACA

Coding sequence (CDS)

ATGGTTACAGATCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACTAACCCTAACCCTTTTTCTTCCTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAGGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCTCATCACCACCACAACCACCACCAGCACCAGCACCAGCACCACCATCATCATCAACAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCGCCGCCTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGTACCCAGACCAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTGCAGTTGGTGTAAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGGTTATATCTGAAGCTCTAGCAAATTTTTTTGGTGTCGATGGAAGGGAAATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGACCCTTTGAACCCGATGGCGGTCTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGA

Protein sequence

MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFILRSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Lsi02G018680 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-13
Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 166 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 225
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 226 MNKLLAKHII-------PLEPTKPSSSKKARVENESAVGVKG 261
           MNKLL KH+          E  K +  K+ ++ENES   + G
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENESLPNLSG 226

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BLAST of Lsi02G018680 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.0e-13
Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 166 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 225
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 226 MNKLLAKHIIPLEPTKPS 244
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

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BLAST of Lsi02G018680 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-09
Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 0


Query: 85  QQQQQLPSSQKDLFAL-HQSPNFQSAPSPTSSAFHTFTAQPPPPKAESAVSPTVPGSDPP 144
           +++  L + +KDL AL  +  +  +APS   S      A+    K  +  + T  G  P 
Sbjct: 32  RRKVDLSAHKKDLNALILKCFDETAAPSEKESLEKQAPARKTKGK-RATENGTEEGKKPA 91

Query: 145 KESTQT--------KTKRRGGPGG--LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIR 204
           K + +         K KR   P    LNK   +SP+L   +G  +L R + VK+LW YI+
Sbjct: 92  KRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIK 151

Query: 205 KNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL 231
            ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Sbjct: 152 AHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

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BLAST of Lsi02G018680 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 327/346 (94.51%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPH    HHQH H HHH  QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPH----HHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           +AQPPP K +S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 SAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Lsi02G018680 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.0e-178
Identity = 327/346 (94.51%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPHHH +HH   H HH   QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPHHHQHHH---HHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           TAQPP  KA+S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 TAQPPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

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BLAST of Lsi02G018680 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.0e-178
Identity = 327/346 (94.51%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPHHH +HH   H HH   QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPHHHQHHH---HHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           TAQPP  KA+S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 TAQPPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Lsi02G018680 vs. ExPASy TrEMBL
Match: A0A6J1CGF4 (uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010586 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.0e-165
Identity = 305/346 (88.15%), Postives = 317/346 (91.62%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASA NP+ FSSLNAVVQEL+TKLGLDLSHKVDFIHAQIQF+L
Sbjct: 1   MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHP  P HHH HHQ            Q  P  QKDLF LHQ+PNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPLHPQHHHRHHQ--------PPPPQPPPPPQKDLFTLHQTPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           TAQPPPPK ++AV+PT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 TAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENES +GVKGAE SICPSV+ISEALA FFGVDGREMLQ+EVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Lsi02G018680 vs. ExPASy TrEMBL
Match: A0A6J1FLX5 (uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC111446611 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.8e-161
Identity = 299/347 (86.17%), Postives = 314/347 (90.49%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MV+DQELS+A+QCLLRDSAS +NPNPFSSLNAVV ELQ+KLGLDLSHKVDFIHAQIQ IL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQP  H N         HHHQQQQ  PSSQKD+   HQSPNF SAPSPTSSAFHTF
Sbjct: 61  RSHPQQPQIHQN---------HHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL 180
           TAQPPP K E+A +P T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPEL
Sbjct: 121 TAQPPPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPEL 180

Query: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 240
           PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEP
Sbjct: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEP 240

Query: 241 TKPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYI 300
           TKPSSSKKARVE+E A+ VK AEPS+CPSV+ISEALA+FFGVDGREMLQSEVLRRIWEYI
Sbjct: 241 TKPSSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYI 300

Query: 301 KVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           + NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 RANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Lsi02G018680 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 635.2 bits (1637), Expect = 3.3e-178
Identity = 327/346 (94.51%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPH    HHQH H HHH  QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPH----HHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           +AQPPP K +S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 SAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Lsi02G018680 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 632.9 bits (1631), Expect = 1.7e-177
Identity = 327/346 (94.51%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPHHH +HH   H HH   QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPHHHQHHH---HHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           TAQPP  KA+S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 TAQPPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Lsi02G018680 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 8.2e-177
Identity = 327/347 (94.24%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPH    HHQH H HHH  QQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPH----HHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL 180
           +AQPPP K +S V+PTVPGSDPPKE STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL
Sbjct: 121 SAQPPPAKPDSVVAPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL 180

Query: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 240
           PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP
Sbjct: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 240

Query: 241 TKPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYI 300
           TKPSSSKKARVENESAV VK AEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYI
Sbjct: 241 TKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYI 300

Query: 301 KVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           KVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 KVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Lsi02G018680 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 627.5 bits (1617), Expect = 6.9e-176
Identity = 327/346 (94.51%), Postives = 329/346 (95.09%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASATNPNP SSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPH +         HHHHH   QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPHPY---------HHHHH---QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180
           TAQ PP KAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP
Sbjct: 121 TAQLPPAKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELP 180

Query: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240
           RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 181 RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 240

Query: 241 KPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIK 300
           KPSSSKKARVENESAVGVKGAEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYIK
Sbjct: 241 KPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           VNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 334

[Close]

BLAST of Lsi02G018680 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 327/347 (94.24%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASATNPNP SSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120
           RSHPQQPH +         HHHHH   QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF
Sbjct: 61  RSHPQQPHPY---------HHHHH---QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF 120

Query: 121 TAQPPPPKAESAVSPTVPGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL 180
           TAQ PP KAESAVSPTVPGSDPPKE STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL
Sbjct: 121 TAQLPPAKAESAVSPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPEL 180

Query: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 240
           PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP
Sbjct: 181 PRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 240

Query: 241 TKPSSSKKARVENESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYI 300
           TKPSSSKKARVENESAVGVKGAEPSICPSV+ISEALANFFGVDGREMLQSEVLRRIWEYI
Sbjct: 241 TKPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYI 300

Query: 301 KVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 347
           KVNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 KVNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 335

[Close]

BLAST of Lsi02G018680 vs. TAIR 10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-78
Identity = 184/396 (46.46%), Postives = 243/396 (61.36%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MV+DQ+L++ ++ LLR S    +P+  +SL+++VQ+L+ KLGLDL+ K  FI  QI  +L
Sbjct: 1   MVSDQDLAKGVETLLRQS----DPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILL 60

Query: 61  RSHP------------QQPHHHHNHHQHQHQHHHHHQQQQQLPSSQKDLFALHQSPNFQS 120
           R+H             QQ H       HQ Q+ H       +P   K  F L     F  
Sbjct: 61  RAHQNPSASVASASSVQQSHPPPPPSSHQQQNLH---SGVNVPPMAKGHFTLSHPSQFSV 120

Query: 121 APSPTSSAFHTFTAQPP---------------------------PPKAESAV------SP 180
           +        H F  QPP                           P + +S+V      + 
Sbjct: 121 SSQSQQYPSH-FALQPPYHSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNA 180

Query: 181 TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKN 240
           ++  +  PKES    TKR+GGPGGLNK+C VSPEL+ +VG+P LPRTEIV+QLWAYIRKN
Sbjct: 181 SLSVNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKN 240

Query: 241 NLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS-SSKKARVENES 300
           NLQDPSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+PL+P+K S  +KKA+ E E+
Sbjct: 241 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVET 300

Query: 301 AVGVKGAEP----SICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNP 347
               +  EP    +I  +V +SE L  FFG    EM   E++RR+WEYIK+N+LEDP+NP
Sbjct: 301 K--TETTEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNP 360

[Close]

BLAST of Lsi02G018680 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-38
Identity = 86/212 (40.57%), Postives = 127/212 (59.91%), Query Frame = 0


Query: 143 PKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSN 202
           P +S + K KR+GG GG  K+C +SPELQA  G  EL RTE+VK LW YI++NNLQDP++
Sbjct: 249 PAKSVE-KPKRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPND 308

Query: 203 KRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLE-------PTKPSSSKKARVEN--- 262
           KR IIC++  R +F  +  +MF+MNK L KHI PLE        +K   + K ++E+   
Sbjct: 309 KRSIICDESFRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGD 368

Query: 263 --ESAVGVKGAEPSICPSVVISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNP 322
             E     K  +  +   + +S+AL  F G     + +++V++R+WEYI  N L+DP + 
Sbjct: 369 SEEPNEKDKKQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDK 428

Query: 323 MAVLCDAKLRELFGCESISALGIPEVLGRHHI 343
             V+CD KL+ELF  +S     + ++L  H I
Sbjct: 429 RRVICDEKLKELFEVDSFEDTSVSKLLTNHFI 458

[Close]

BLAST of Lsi02G018680 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-31
Identity = 77/248 (31.05%), Postives = 128/248 (51.61%), Query Frame = 0


Query: 140 SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQD 199
           +D  K     K K+RG  GG NK+C +SP+L+  +G  +L RTE+VK++WAYIR+++LQD
Sbjct: 84  NDDDKTELPVKAKKRG--GGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQD 143

Query: 200 PSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI------------------------- 259
           P+N+R I+C++ L  +F     +MF+MNK LAKHI                         
Sbjct: 144 PTNRRNILCDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSGER 203

Query: 260 ----IPLEPTKPSSSKKARVENESAVGVK------------------GAEPSICPSVVIS 319
               + +E    ++ +++R E + +V  +                  G    +C    +S
Sbjct: 204 DEKDVKIEEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCS---LS 263

Query: 320 EALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALG 341
             L  F G    ++ ++EV++ +W+YIK N+L+DP +   ++CD  LR LF  ESI+   
Sbjct: 264 PELQAFTGTP--QLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQ 323

[Close]

BLAST of Lsi02G018680 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-14
Identity = 41/106 (38.68%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 131 SAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWA 190
           +  S     SDP   +T TKT+    P G+ K   VS  +Q +VG PE+PRT+ +K++WA
Sbjct: 45  AVTSAAAASSDP---TTTTKTRE---PRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWA 104

Query: 191 YIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLLAKHII 236
           YI++++LQDP NKR I+C+++L+ +FE  +     ++ KL+  H +
Sbjct: 105 YIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144

[Close]

BLAST of Lsi02G018680 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-12
Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 98  FALHQSPNFQSAPSPTSSAFHTFTAQPPPP-KAESAVSPTVPGSDPPKESTQTKTKRRGG 157
           F   ++ +F++  +P SS    F + P    +   AV+     S+P      T T +R  
Sbjct: 11  FLCIKTTSFRNPSTPLSSL--RFASHPAAKLRLVRAVTSATESSEP------TATNKR-V 70

Query: 158 PGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 217
           P G+ K   VSPE+Q IV  PE+ RT+ +K++WAYI++++LQDP NKR+I+C+++L+ +F
Sbjct: 71  PRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIF 130

Query: 218 E-TDCTDMFKMNKLLAKHII 236
           E  D     ++ KL+  H +
Sbjct: 131 EGRDRVGFLEIAKLIGPHFL 141

The following BLAST results are available for this feature:

BLAST of Lsi02G018680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05024	2.1e-13	38.24	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q08747	6.0e-13	46.15	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
O74503	2.4e-09	35.03	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Lsi02G018680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	1.6e-178	94.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	8.0e-178	94.51	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	8.0e-178	94.51	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CGF4	2.0e-165	88.15	uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1FLX5	6.8e-161	86.17	uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC1114466...	[more]

BLAST of Lsi02G018680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	3.3e-178	94.51	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_008447697.1	1.7e-177	94.51	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_031744592.1	8.2e-177	94.24	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_038900174.1	6.9e-176	94.51	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]
XP_038900172.1	1.7e-174	94.24	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]

BLAST of Lsi02G018680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22360.1	1.4e-78	46.46	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	1.9e-38	40.57	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	5.0e-31	31.05	SWIB complex BAF60b domain-containing protein	[more]
AT4G34290.1	2.5e-14	38.68	SWIB/MDM2 domain superfamily protein	[more]
AT2G14880.1	1.8e-12	35.00	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 160..239 e-value: 1.2E-44 score: 164.3 coord: 265..346 e-value: 1.3E-9 score: 48.0
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 269..340 e-value: 1.3E-18 score: 66.6 coord: 164..234 e-value: 1.3E-27 score: 95.5
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 159..236 score: 22.405313
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 264..343 score: 19.460289
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 155..245 e-value: 1.4E-30 score: 106.9 coord: 264..345 e-value: 2.6E-20 score: 74.1
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 263..341
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 153..239
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..59 e-value: 4.0E-6 score: 26.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..121
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..342
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 1..342
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 269..340 e-value: 3.83453E-20 score: 81.0505
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 164..234 e-value: 1.67273E-40 score: 134.978

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G018680.1	Lsi02G018680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus