Lsi02G016710 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCTAAATCTCCTCGGCACCTATTCAACGGCAACTATGTTTCATCACCGCCACACACGTGGCAGCTTGCCAATGCTCCCATCCTCAAGCTGGTGTGTCACCGGCCGGTGCTCGTAGTATACCCCTTACTGTAAGCTTACTGGCAACTTGTTTTGCCGGTTACGAAGCGGTTATTTCTGGTGTATAAAAAGGCCAGTGGAAGCATAAGGAACAAAATTCAAACCACAAAGCATTCAGCAAAGAAATACAGAGTGAAAAAGGAAAATTCTTCTTCAATCTCTTAGAACTGAAACAAAAAAAAAAAAAATGCCAATCCATAAATTTACAATCGGAACACCGGGAGAGGCGAGCCAACCGGACGCGATCAAGGCTGCATTTGCCGAATTCTTCTCCATGATCATCTTTGTTTTCGCCGGACAAGGATCCGGATTGGCTTTTGGTAAGTTCTAATTGAGTTCAAATCGTTGATTCGATGTTCTATGGTCCGCATTTCGTTTGAATTTCGATTACTTGTGGATTTGTTCGATTTCTGAACTGATAGTAGTCAATTAGGAATTTAACGAGTTGTCTGAGCATTTTCTGGACTCAAATTTGAAGATCTTCAGTTGTAATTGAGCTATTGATTGCGCATTGATGTGTAGGTTTATAATTTTGGCAGATAAGTTAACGGACGGTGGTTCTGCGACGCCGTCGGGGTTGATAGTCGCATCTCTGGCTCATGCTTTTGCGTTCTTTGTGGCGGTCTCCGTCGGAGCTAATATCTCCGGCGGCCATGTAAATCCGGCAGTTACATTTGGTGCGCTTATTGGTGGAAACATATCGTTCTTTAGAAGTATAATGTATTGGATCGCTCAATTGCTTGGCTCTGTTGTTGCGTGCTTCCTTCTTAAGTTTGCGACCGGTGGAAAGGTATGATGCTGCCAAAACTTTTATTTATTTATTTAAGTTCAACACGAATGTTAATTATAAGCTATGCTGATTAGTGAATTTTCATTGATATGTCTATATTTCCACGTTTTCAGGGATTCGATATCGATATAGAGGTGAATCGATATTTTTATTATATCGTAGACAAATCTACGAAACACACAATATAAGCATCAAATTGACGCTAATATAAATATAATTTGAAAATAATAAATTATTTATTTATTAATTTAATTTAATTTTAATCTTTTTTTTTTTTATAATTTTTCTAGAAATATCCATCAAAATTGATATTTTATCGATATTTCCATAAAAATTTCTGTAAAATTAAGACTTCGATATTTCCATCGACATCGATATTTTAAACCTTGTTAATGAGTAAGAATGTATTTGGCTCGTATAACCATTTTTAGTTTAGTGAGAATATAGATTCGGATATCTGCGTTGGAATAGATAGTATTGTATTTTTGGCTTAGAGTTGCATCATTATATTTTACATTCATGGATTACATTCTATTACTACTAAGGTAAGTCTTTTCACTTAATAGCCAATTTATAGAAGATATATGACTATTCAAATTACTATGAATTGGTGTATAGATATCTCAAATCTCCAAATTAGAACACTTAATTTTTTCATCAATACTTTTCTTCCAAGTCCCATCAAGAATTCGTAAATGTTTGGTTTGCTACTCAAAGTAAGATCATGTTATCTTTTAAGTAATGATTAAGTACAGCCTAGGCTACATCTAATCATGTGCATCTCTTTTTCTACCCACAAAGTAAAAATAAAAAATATATTTTTTTAAAAAAAACTATTTGCCACATGTCAGAATTTTATTGGCCTATCCCTCAAGATGCACCAAGGTAGATACAGCCAAGGAGTACCCAAGTTTTTTTCTTATCTTTTTATGAATGTAACACCTCATTCCACAAAATCTAGTAAATACCACTTTGTGGAGTAAATCAAACAAACTTTGATGGGAGAAAAATGTTGATGGAAAAAGTATTTTTTTTTCAATTTTAGGAAGAGACGTATTTATAGTCTATAGATTAATTTGTGACTATTCAAATAGTCATATCCCTTATACAAAAGTGGTTATCAAATGAAAAAATCACTTGACCATAGTGAAGGAAGGCAACCTATGGATGCGAAAAGATGAAACTCGGTCACATACAATTTATTCCAATGATCAATTCCTATTCTTTTAGATAAAAATATATACTTTAATAAGTTGAATTACGTTTGCATGAATTTTAGTTCTAAAATTTAAAAACTAGCAAACTTTATTTTTAATTTAACCAAAAACTATCCAATATTACCCTTAGTTGTAGTGGTAATTGATGATACACATGAGGTTTAAATCTCACAATAAATTTTTCTTTGGTCCCAAAATTTTTACAACATTCAGTTTAGTCCTTAAATTATTACTCTTGAAATTAAGAAGTTTTTAGAAATGATCTAAATTTTATGATTTAAAAATCCAAAAATAATTTTAATTTTTGTTTGAAATTAGAAAGATTTAAAATTAATGCAACTAAAATTTTGTGTTTGGATCTTCACGGAAAAAAAATGAAATTCTCACCAATATAAAATTTAATGTTGATTTATTAATACAAAATTTAAATATGATAAAGTGAAAAAATAATTTACTTCAAAATTCTAACATCTATATGTCTATGTTGGCTTTGTATTTGACAAATCCATCAGTTTGTTTTGTTTTGTTTTTTAAAACATTCCATTGTGTTCTATTTCATGGGATAGCAAATAATATAATTTATTTGTAAATAGTTACAATTTGACATTACTAAAAATCCTAGATAAACTAACTGATGAATAAAAAACAATAATTCTGGTTTCAAACTTTCAAATTTTGAATATTATATTCGTTGAACTTCGAATTGAAAGCATAACTATTTCAATCTTTGTAGTTATTTTGCCCATTCATATTTACTAACCAATGTCGCTCTACAATATGTCCAACCAACACTTGTTAAAGCTACACTTTTTATTAAATAAAGATAAGAACCAAAATGATTATTACTTTCTTTATCCATCAACTAAAATACATATCCAATAAACTAAGAGATCCAAATGAAATAGACCTAACTGAAATAAACATGAAAGTTTAGAGAACATAATGACTATTTTTCATAGTTCAACAACTAAAATAGAAAACTAAAAACTACCATGATTATAGAATATGTAGCATAGTCTAGGATTTAAAATTTAGTATTTGCAAAGTGAGAGAATATGATTATCCCTCCCTTGATGATTTCCCTCTTATCTTTCATCTGCAATATATATACAATGTGGGTGGTAACGAAACGCAGGTAACACCAGCATTTGCCCTGTCATCAGGAGTTTCTGTGTGGAATGCATTTATATTTGAGGCAGTGATGACTTTTGGATTAGTATATACAGTGTATGCAACAGCAATAGATCCAAAGAGGGAGAATTTGGGAATCATTGCCCCAATTTCTATTGGTTTCATTGTTGGTGCTAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTAGTCACCCGGTCATGGACCCATCACTGGGTTTACTGGCTTGGTCCTATGGCTGGTGCAGCCATTGCTACCATTGTCTATGACACCCTCTTTATCTCAGACTCCACGCATGATCCTCTTACTCAGTATAATGATTTCTAG ATGGATCCTAAATCTCCTCGGCACCTATTCAACGGCAACTATGTTTCATCACCGCCACACACGTGGCAGCTTGCCAATGCTCCCATCCTCAAGCTGGTGTGTCACCGGCCGGTGCTCGTAGTATACCCCTTACTGTTTATAATTTTGGCAGATAAGTTAACGGACGGTGGTTCTGCGACGCCGTCGGGGTTGATAGTCGCATCTCTGGCTCATGCTTTTGCGTTCTTTGTGGCGGTCTCCGTCGGAGCTAATATCTCCGGCGGCCATGTAAATCCGGCAGTTACATTTGGTGCGCTTATTGGTGGAAACATATCGTTCTTTAGAAGTATAATGTATTGGATCGCTCAATTGCTTGGCTCTGTTGTTGCGTGCTTCCTTCTTAAGTTTGCGACCGGTGGAAAGGTAACACCAGCATTTGCCCTGTCATCAGGAGTTTCTGTGTGGAATGCATTTATATTTGAGGCAGTGATGACTTTTGGATTAGTATATACAGTGTATGCAACAGCAATAGATCCAAAGAGGGAGAATTTGGGAATCATTGCCCCAATTTCTATTGGTTTCATTGTTGGTGCTAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTAGTCACCCGGTCATGGACCCATCACTGGGTTTACTGGCTTGGTCCTATGGCTGGTGCAGCCATTGCTACCATTGTCTATGACACCCTCTTTATCTCAGACTCCACGCATGATCCTCTTACTCAGTATAATGATTTCTAG ATGGATCCTAAATCTCCTCGGCACCTATTCAACGGCAACTATGTTTCATCACCGCCACACACGTGGCAGCTTGCCAATGCTCCCATCCTCAAGCTGGTGTGTCACCGGCCGGTGCTCGTAGTATACCCCTTACTGTTTATAATTTTGGCAGATAAGTTAACGGACGGTGGTTCTGCGACGCCGTCGGGGTTGATAGTCGCATCTCTGGCTCATGCTTTTGCGTTCTTTGTGGCGGTCTCCGTCGGAGCTAATATCTCCGGCGGCCATGTAAATCCGGCAGTTACATTTGGTGCGCTTATTGGTGGAAACATATCGTTCTTTAGAAGTATAATGTATTGGATCGCTCAATTGCTTGGCTCTGTTGTTGCGTGCTTCCTTCTTAAGTTTGCGACCGGTGGAAAGGTAACACCAGCATTTGCCCTGTCATCAGGAGTTTCTGTGTGGAATGCATTTATATTTGAGGCAGTGATGACTTTTGGATTAGTATATACAGTGTATGCAACAGCAATAGATCCAAAGAGGGAGAATTTGGGAATCATTGCCCCAATTTCTATTGGTTTCATTGTTGGTGCTAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTAGTCACCCGGTCATGGACCCATCACTGGGTTTACTGGCTTGGTCCTATGGCTGGTGCAGCCATTGCTACCATTGTCTATGACACCCTCTTTATCTCAGACTCCACGCATGATCCTCTTACTCAGTATAATGATTTCTAG MDPKSPRHLFNGNYVSSPPHTWQLANAPILKLVCHRPVLVVYPLLFIILADKLTDGGSATPSGLIVASLAHAFAFFVAVSVGANISGGHVNPAVTFGALIGGNISFFRSIMYWIAQLLGSVVACFLLKFATGGKVTPAFALSSGVSVWNAFIFEAVMTFGLVYTVYATAIDPKRENLGIIAPISIGFIVGANILVGGAFDGASMNPAVSFGPAVVTRSWTHHWVYWLGPMAGAAIATIVYDTLFISDSTHDPLTQYNDF Homology
BLAST of Lsi02G016710 vs. ExPASy Swiss-Prot
Match: Q94CS9 (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 8.3e-84 Identity = 151/202 (74.75%), Postives = 170/202 (84.16%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy Swiss-Prot
Match: O82598 (Aquaporin TIP1-3 OS=Arabidopsis thaliana OX=3702 GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.1e-83 Identity = 154/208 (74.04%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy Swiss-Prot
Match: Q9ATM0 (Aquaporin TIP1-2 OS=Zea mays OX=4577 GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 5.9e-82 Identity = 150/202 (74.26%), Postives = 171/202 (84.65%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy Swiss-Prot
Match: P25818 (Aquaporin TIP1-1 OS=Arabidopsis thaliana OX=3702 GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.9e-80 Identity = 149/208 (71.63%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy Swiss-Prot
Match: Q41963 (Aquaporin TIP1-2 OS=Arabidopsis thaliana OX=3702 GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 299.7 bits (766), Expect = 3.3e-80 Identity = 147/211 (69.67%), Postives = 172/211 (81.52%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy TrEMBL
Match: A0A1S3CJE9 (aquaporin TIP1-3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501648 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 3.4e-104 Identity = 194/209 (92.82%), Postives = 198/209 (94.74%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy TrEMBL
Match: A0A0A0KQU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505790 PE=3 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 4.5e-101 Identity = 191/210 (90.95%), Postives = 196/210 (93.33%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy TrEMBL
Match: A0A6J1BW74 (aquaporin TIP1-3 OS=Momordica charantia OX=3673 GN=LOC111006080 PE=3 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 7.7e-101 Identity = 185/208 (88.94%), Postives = 200/208 (96.15%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy TrEMBL
Match: A0A5N6QC57 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001525 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.4e-89 Identity = 168/209 (80.38%), Postives = 187/209 (89.47%), Query Frame = 0
BLAST of Lsi02G016710 vs. ExPASy TrEMBL
Match: A0A0F7G5V2 (TIP41 OS=Betula luminifera OX=312789 GN=TIP41 PE=2 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 2.3e-89 Identity = 169/209 (80.86%), Postives = 186/209 (89.00%), Query Frame = 0
BLAST of Lsi02G016710 vs. NCBI nr
Match: XP_038890729.1 (aquaporin TIP1-3 [Benincasa hispida]) HSP 1 Score: 392.9 bits (1008), Expect = 2.2e-105 Identity = 197/209 (94.26%), Postives = 202/209 (96.65%), Query Frame = 0
BLAST of Lsi02G016710 vs. NCBI nr
Match: XP_008463493.1 (PREDICTED: aquaporin TIP1-3-like isoform X1 [Cucumis melo]) HSP 1 Score: 387.9 bits (995), Expect = 6.9e-104 Identity = 194/209 (92.82%), Postives = 198/209 (94.74%), Query Frame = 0
BLAST of Lsi02G016710 vs. NCBI nr
Match: XP_004149825.1 (aquaporin TIP1-3 [Cucumis sativus] >KGN51269.1 hypothetical protein Csa_008722 [Cucumis sativus]) HSP 1 Score: 377.5 bits (968), Expect = 9.4e-101 Identity = 191/210 (90.95%), Postives = 196/210 (93.33%), Query Frame = 0
BLAST of Lsi02G016710 vs. NCBI nr
Match: XP_022133519.1 (aquaporin TIP1-3 [Momordica charantia]) HSP 1 Score: 376.7 bits (966), Expect = 1.6e-100 Identity = 185/208 (88.94%), Postives = 200/208 (96.15%), Query Frame = 0
BLAST of Lsi02G016710 vs. NCBI nr
Match: KAE7996836.1 (hypothetical protein FH972_001525 [Carpinus fangiana]) HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89 Identity = 168/209 (80.38%), Postives = 187/209 (89.47%), Query Frame = 0
BLAST of Lsi02G016710 vs. TAIR 10
Match: AT4G01470.1 (tonoplast intrinsic protein 1;3 ) HSP 1 Score: 311.2 bits (796), Expect = 7.7e-85 Identity = 154/208 (74.04%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Lsi02G016710 vs. TAIR 10
Match: AT2G36830.1 (gamma tonoplast intrinsic protein ) HSP 1 Score: 300.4 bits (768), Expect = 1.4e-81 Identity = 149/208 (71.63%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of Lsi02G016710 vs. TAIR 10
Match: AT3G26520.1 (tonoplast intrinsic protein 2 ) HSP 1 Score: 299.7 bits (766), Expect = 2.3e-81 Identity = 147/211 (69.67%), Postives = 172/211 (81.52%), Query Frame = 0
BLAST of Lsi02G016710 vs. TAIR 10
Match: AT1G17810.1 (beta-tonoplast intrinsic protein ) HSP 1 Score: 239.6 bits (610), Expect = 2.8e-63 Identity = 117/210 (55.71%), Postives = 151/210 (71.90%), Query Frame = 0
BLAST of Lsi02G016710 vs. TAIR 10
Match: AT1G73190.1 (Aquaporin-like superfamily protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62 Identity = 117/204 (57.35%), Postives = 148/204 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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