Lsi02G016070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G016070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	pre-rRNA-processing protein ESF2
Location	chr02: 21957511 .. 21964616 (-)
RNA-Seq Expression	Lsi02G016070
Synteny	Lsi02G016070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCCCTCTTTCGCGCCGCCCCCCAGTTTGATGGGAAATTGCCAAAAATAGGCACATTTTAGAGGGTTAAAGATTAAAGATTTTGGGATCAATTTGTAACTGGGATGAGATGTGAAATGTCAATATTACCCCTAATTAAATAAAACCCTAAAATGAAGAAAAAGAAGAGCAGTCCCACCCCCTCTCGCGCGCGTCAATCCTTCACGGTGTCCGCGCGTCGATTCTTCCCCAGCGGCGGCCCATCCGGCGAAAACCCTTGGCGGCGGCACCTTCGACGGCAGCAGCTTCAGACACATTTGGACGAGCGACAACGCCTTCGTACGGGCGGCAGCACCTTGGAATGGTTGGTTAGGTTTATTGAGTTTTTTTATTCGTTTTGATTGAGTTTTCTGATTTTTGGATGTTGGTTGGGCGCTTCTTCTGAAAATTGTTGGTTGGGTTTATTCTCCACTGACGTTACTTGTGAAAATTGTTGTAGGTTGGGTTTATTTTTCATTGACATCACTTGTGAAAGTTGTTGGTTGGGTTTATTTTCCATTGACGTCACTTGCCAACAATAAAATTGTTGGTTGGGTTTATTTTGATTTGTTTCTTGCAAAACTATTTTTGGTTGGGTTTATTATGCAAAAACATGTTTTTGCTACTTTTTTAGGTGATTTTGAGGATTACATATCATTACAGGCATTAGTTTTTATCTTAAGAGTATCGCGCAACTGTCTTCAAACAGAAAAACCTCTACTCTTAACGCATTGTGACACATTATATATGTATTTTAGGCTAACTAGGGCGGGTATGGATGTGTTTTGGCTAGCCTTTTAGGTATTGTTTTTTATCTCGCAACATCTCGCAATGATTTTCAAATTCGAAACAATCAATTGTAACTTATTTTAATAGGTGTTTTAGGTGATTTAGGGTGATTTTAGACATCTTTTAAATAGTTTTTAGCTACTGTTTTTTATCTCGCAATATCTCGCAACAACTTTCCAACATCTCGCAACACATATAAAAATGACTTGGAGTTGGGCATTCAAGTTTGGAAGTTGGAACGTTGTTGCAAGATATTGCGAGAAGTTGCGAGATAAAAAACAGTAGCCACTAAACTATCTAAAACATGTCTAAACCCACCTTAAATCACCTAAAACACATGTAAAAATGATTTAGAGTTGGTGTTTCAAGTTTGGAAGTCGGAAAGTTGTTGCGAGGTATTGCAAGATAAAAAATAGTAGCTAAAAAACTATCTAAAGAATGTCTAAACCCACCCTAGATCACCTAAAACACATTTTGGAATTGGGCGTTTCAAGTTTGGAAGTTGGAAAGTTGTTACAAGATATTGCGAGATAAAAAACAATAGCTAAAAAACTATCTAAAAAATGTTTAAACTCACCCTAAATCATCTAAAACACATATAACAATGATTTGTGGTTGGAAATTTCAAGTTTGAAAATTGAAAAGTTGTTGCGAGATATTGCAAGACGTTGCTGTGAGATAAAAAAAAACGCCTATCTTGCAACTATCTTGCAACATAAAAAATTAGGAGACTAAAAAATCTGTAATAATTAATAGAAATCATAAAAACTTACCACAAAGAGAATATGTTTGAGAGAATGTTCAACTTTCTAACAATATTGGAGCATGGCAAGAGAGCTTTAGAGAAGAGAAGTTGGAGAGAAGTTGGAGAAAAGATGCGAGGGAAGGATGAAAGTCATAAAATGTGTGTTATAGAGAATAAAAAGTTGGTTTCTATCTTGTAAGGGCATAATGGACATTTCATATGCCCATTTGTCTCAAAGCTCTTCATTTTAAAAATTGATCCCAAAAGTCTTCTAATCCCCTTAAAATTGTCGTATTTTTGACAATTTCCCCAGTTTCATCCCCATCCCTTATTGTCTTCTTCTTTCATATCAGGGGTAGTGTGTTCTTGTGTTTTAAAAGGCCTTCTCGGGCGCACACCTAGGCTCAAGGCGCAGGTCTGGCACAGGCTCACAAGATAAGGCGCGTGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCCTGGGCCTTGGGGCTTTTTCATTATTTTTAAAAATAGTAATAATTAAGGGTTTTCCTTTTTTATTAACTAAAATAATCAAGTTTACTAAGCTTAAATGCAAAATTTCTTGTGTTTAGGGTCTTTTTCTTCCATATTTCCACTTAACCATGCTTTCTCTTTTTAATGTAATATTTTTATATATAGTGCGTCTCACATAAAAAGCCCGCGCCTTTTTGTGGCCTTGCGCCTAGGCTCTAGAGGGTCATTGCGCCTTGGGCATTTAAAAACACTGTGTGCGATGAATCTAGCCATCGACCTGCACTGTTCACACGCATGGACGGTGACCCTCGCAGCGGCGAACTAGATCGCTTCTTTGCAACTCACATCAGCAGCGACAAAACGTTGTTCAGCGTGGCATCTGAACGGCAATGAATCACACACTTGGTCCTCCTACACAAGAGGTGAGCGTAACCAGCAGCAACCATTGCGCCCCGACGAACCCCTTCCTCTCGCCTTGATTTTGCTCATGCAACTAACACACGAGCAAGACGCCAACAACCCACGCCAATCAGACCTTGAATCAACTTGGGTTCGTGGCCCACACTCTGAATGGCCTTGGATTTGAACACTCTTAGTATCTAGAAGTTAGATTTCCAAGTTCAAACTCAACCTAACACGTTCCAGCAAGATTCGACTTTTAGGTAAAGTTGCTCTAATTTCCTTTTAGACTAGTTTAAGTGTTCTAATTGGATTCTAATGTTTGGAACTCCTCCATGTTTAGGTTTGGATTAATTTCAGACTCATTTGGACACTTTTCAGGAAGGAACCAAGTCTTTTTTTTTTTTTTTTTGGGTAAGAATTAGGTAGTAAAGTTCTGCTTGGGCTCTTAATTTTATGCAAGTGCTTTATTATAAATTCGAACCTTTGGGACACTTCTATTGGTAGTTTTGGACTATTTGGACTTTCGAACAAAGTTTAAGAGTGTCGCTGGGTTTCTCTTGATCACCCTTGTAGTTTCAATTGAGGTGTTCTATAAACATCGAACTGAGTTTTAACTTTGTAATCTTTTTTTTTTCAGGAGCCTATCAAATAGTTTAGGTGGAATATTTATGGTTAAAATGATTGATTTTCTCAAATCGCATGTGTTCTGGATGTTTAAGCATGATGTAATGTAATGTTGTAATGATGTCGTAATGACTAGCATGTTGAGCACGTTGAGGTGTTGTTATGGATGAATATATGATTTATGTTGGGAGTTGTTTTATGTGGTTTGCCATAGAGCATGTTTTAGAAGCATATTGTAGGATTCATACATTCTAGTGAGATTGTGTGAGAAAGAGGTTAGAGTACCTTGTGCATTTAGAAAGAAAGTTGGGTGAATATCATGTGCCTGATATAAAAATGGTGGATGAGTGTCACCATTAGGTTAAGAGGACTGAGGAGCATTGAGGCTTTGGGTCAAAATGGTCAAGGGCTGTTGTGATGAATCTAGAAAGGCAAGTATTCCAAGACAACCTCTTGTATGCTAAAACCGAGTTTGATCTATTATGGGTTATCTATATATATATTGTTCCAGCACATCCAGCTTTCAGTTTTCAATTTCACAAAATTATTTGATTGTATGAATCTCTTTCTCTATGTTTCGAAGGCTCTATCTACTCCTGTTCTGCTAGGCTTACGCTCAGTAAACAAATTTGTTAGTAGAATTGAACTCTTTACTGATCATCTTACTTAGAGAATTTGTTGGATTAAGAAATTCAGAAGTGATTCAATGAAGATCGTTTGTGTGGTGTACAACAATAGAGCTCTGATGTTACTCTTATTTTTCTTATAGTAGCAATTTTTTTTTTTGTTATTATTGATTGTCATTTTAATTGTATCTTGTAGTAAGATGTCCAAGGAGAGCTTTGAAGTTAATTTAACAACTGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAATAAGAAAAAACAGAAAGAAGCAGTTATTGATGGAAGGTGTAGATGTCATGGAAATGAAAGAGGTAGGATCTGTTCAGCTTGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGATAAAGAAGAGTACTCAACAATGTATTGAGGAGAGCTCTATGAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTGTGAAAGAGGGTAGTCCTTCCTCTAATGGTGGAAATGAGAAATTTTTCGAAAGGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGGCAGCATAGTCAGAGAAAACTCTGGAGAGAAGATTCCAGAGTCTAACAATGAAAAAGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGGAAATTCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGGTAATGAATAATTACGCATAATATTTATTTTTTCCATTAGTTTTCCTGTTGCTTCAAAATTTTAATTGCATATTTTTTTTCTCTTCTGTTCGACTTCTGTCATTTAGTTTAGAATGGATTTTATTCTAGTTTACTTATTCAAGGTAATTTATGCTTTCATGTTCAGATGCTGCCAATCAAGTGCAACGAAAGCGTGCAGGAGGGTTTCGAGGACAGTTTTTTTCAGAAGGGTAAACTGACACTCCTGACTAACTTTTTTATTTTTTATTTTCAATTCAATAGTTCGTGTTGCACCTTCGACGTAACAATGCTTGGCTTGTGAAATGACTTGGTTTTAGTTACTGATTCTATATTGTCCTTATACGTGCTATGCAGATGGGTTGAATTTACTGATAAAAGAGTAGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGTAAACTTTTATTAAAATATACATGTTTTGTATCTGACATCCTGGCTCGATACATGATTTCTACTCTCTTTTGGGGATGGTGGAAGTCATTGCATTAGGGCTGGTCTTTCGAGTTTCATCGTTCTTTGTCCAATAGGGAACCGATTGACGTGACCTCTTTTCTTTCTTTACTCGATGGCCACCAATTTAGGTGTGGGAGAAGGGATGTGACAGTTTGGAGTCTCAATCCTTTGGAGAGATATTCGTGTAAGTTGCTTTTTCATAGTCTGAGTAACCCTTCTCCCTTAGGCGAGTTAGTCTTTTTAGCGTTTTGGAGGATTAAGATCCCTAAGAAAATGAGGTCTTTTACTTGGCAAGTTTTACATGGTCGTGCTAAAATGATGGATCGACTTGTGAGGGAGATGCCCTCGCTTGTTGGTTCATTTTGATGTATTCTTTGTCAAAAAGTGGAGGAAGATCTAGGCCATATTCTTTGGTGTTGTGAGTTTTCGAGTTTCGTTTGGGACTATTTTATTTAGATGTTTGGTTTTTTGCATGTGTGGCATAAGGACACTAATGATATAATTGGGGAGTTCCTCCTCCATCAGCCTCTAAAGGAGAAGAATCGCTTTTTATGGCTTGACAAGATGTGTGTGTGATCTTATGGATTCTGTAGGAGAAGTGGAATAGTAGGATGTTTAAGGGGGTGTTTGGGCCAAGGAGTTGGGAAGTGTATGGAGTTATGAACTCCACTCCTTGTTTGGCCCAAGTAGTTTGTGGGTCCCACTACTCAAAAAAATCAATTTATGCCATATTAACCCTTTATATTATGGGCTCAAGAGTTCACAACTCCTTGGAGTTGGAGTTCACAACTTCACTCCTTGCCCCAAACACCCCTAGGTGTGTTTGGCCAGGAGTTAGGAAGTAAGAGTAGGGAAGTAGGAGTTTGTGAACTCCATTCCCCGTTTGGCCCAAAGAGTTGGTGGGTCCCACTATTAAAAAACATCAATTTTGTATCTTATCGACTCTTTACACCGTGGGCCCCAGGAGTTCACAACTCCCTAGACTTCATAACTCCTTATTCCTCACTATTCTACTTCTTACTCCAAACACTCCCCTAAAAGGGTGGAAAGGAACTCTAGTGAAGATGTTTCTATTTGAGTTTCGATTTCGAAGACTTTTTGCAATTATTCTAAGCACTATTTTGCGTAATTTGAGTCCTTTTCTGTAGAGGGATCTCCCTTTTTTTTGGGCTTTGGTTTTTTGTATGCCCTAGTATTTTTTTTCATTTTTTTTCTTAAAAAAAGTCTTATTTAGCACAAGGAAATAATTCCTCTGCGGCATGCATTATGTGCTCCACAATCAATTTGGTCGGGTTATGTTTACCAATTACCTTGTCCCACTCTAAAGAATTCCGAAGTTTCTTATGCTCATTAGTTGTGTTTCTCTACCTGTTGTGCATGTGTTTAGGAGGAAGGAAGAGGTCATCTTTCTACTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGGTACACACCTCAAAAACTTGGTCCTGCCCTTTTTTTGCTTACAAGTTACAACACCGTTACTGATATCAAACATTTTGCAGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGGTACATTGAAAAGCCTTACTGCATACATCACTTCACTATCTCAGTATGCATTTGGTCGTTTTGGGGATTCATCTATATCCCCAAACTGGGATTTGATTTGGAAATTTAAGTGTGGTTGAGTTTGTTCATCGTAGTGTTGTACTTATATATTTGTTGTCCCTGTTCTGGAAATATAAAATTTGACCATCTTTTTATATGGCCTACAGAAGCAGAAGTTGCAAGAAGATTCAGAAATCAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTTCAAAACAAACAGAGACTATCTACAAATGTCCTGGCTGGGGTTAGTAATAACGATAATTTACAACCAAACTTCATCTTATGA

mRNA sequence

CTTTCTCCCTCTTTCGCGCCGCCCCCCAGTTTGATGGGAAATTGCCAAAAATAGGCACATTTTAGAGGGTTAAAGATTAAAGATTTTGGGATCAATTTGTAACTGGGATGAGATGTGAAATGTCAATATTACCCCTAATTAAATAAAACCCTAAAATGAAGAAAAAGAAGAGCAGTCCCACCCCCTCTCGCGCGCGTCAATCCTTCACGGTGTCCGCGCGTCGATTCTTCCCCAGCGGCGGCCCATCCGGCGAAAACCCTTGGCGGCGGCACCTTCGACGGCAGCAGCTTCAGACACATTTGGACGAGCGACAACGCCTTCGTACGGGCGGCAGCACCTTGGAATGTGCGTCTCACATAAAAAGCCCGCGCCTTTTTGTGGCCTTGCGCCTAGGCTCTAGAGGGTCATTGCGCCTTGGGCATTTAAAAACACTGTGTGCGATGAATCTAGCCATCGACCTGCACTGTTCACACGCATGGACGGTGACCCTCGCAGCGGCGAACTAGATCGCTTCTTTGCAACTCACATCAGCAGCGACAAAACGTTGTTCAGCGTGGCATCTGAACGGCAATGAATCACACACTTGGTCCTCCTACACAAGAGGTGAGCGTAACCAGCAGCAACCATTGCGCCCCGACGAACCCCTTCCTCTCGCCTTGATTTTGCTCATGCAACTAACACACGAGCAAGACGCCAACAACCCACGCCAATCAGACCTTGAATCAACTTGGGTTCGTGGCCCACACTCTGAATGGCCTTGGATTTGAACACTCTTAGTATCTAGAAGTTAGATTTCCAAGTTCAAACTCAACCTAACACGTTCCAGCAAGATTCGACTTTTAGTAAGATGTCCAAGGAGAGCTTTGAAGTTAATTTAACAACTGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAATAAGAAAAAACAGAAAGAAGCAGTTATTGATGGAAGGTGTAGATGTCATGGAAATGAAAGAGGTAGGATCTGTTCAGCTTGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGATAAAGAAGAGTACTCAACAATGTATTGAGGAGAGCTCTATGAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTGTGAAAGAGGGTAGTCCTTCCTCTAATGGTGGAAATGAGAAATTTTTCGAAAGGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGGCAGCATAGTCAGAGAAAACTCTGGAGAGAAGATTCCAGAGTCTAACAATGAAAAAGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGGAAATTCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAATCAAGTGCAACGAAAGCGTGCAGGAGGGTTTCGAGGACAGTTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTAGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGAGGAAGGAAGAGGTCATCTTTCTACTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCAAGAAGATTCAGAAATCAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTTCAAAACAAACAGAGACTATCTACAAATGTCCTGGCTGGGGTTAGTAATAACGATAATTTACAACCAAACTTCATCTTATGA

Coding sequence (CDS)

ATGTCCAAGGAGAGCTTTGAAGTTAATTTAACAACTGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAATAAGAAAAAACAGAAAGAAGCAGTTATTGATGGAAGGTGTAGATGTCATGGAAATGAAAGAGGTAGGATCTGTTCAGCTTGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGATAAAGAAGAGTACTCAACAATGTATTGAGGAGAGCTCTATGAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTGTGAAAGAGGGTAGTCCTTCCTCTAATGGTGGAAATGAGAAATTTTTCGAAAGGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGGCAGCATAGTCAGAGAAAACTCTGGAGAGAAGATTCCAGAGTCTAACAATGAAAAAGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGGAAATTCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAATCAAGTGCAACGAAAGCGTGCAGGAGGGTTTCGAGGACAGTTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTAGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGAGGAAGGAAGAGGTCATCTTTCTACTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCAAGAAGATTCAGAAATCAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTTCAAAACAAACAGAGACTATCTACAAATGTCCTGGCTGGGGTTAGTAATAACGATAATTTACAACCAAACTTCATCTTATGA

Protein sequence

MSKESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDKVKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIALEDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAGVSNNDNLQPNFIL

Homology

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BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot
Match: O74362 (Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=esf2 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-36
Identity = 93/276 (33.70%), Postives = 151/276 (54.71%), Query Frame = 0


Query: 77  IEESSMKDEAGEYENRAETFVKEGS-PSSNGGNEKFFERRKIALEDAENERTGSIVRENS 136
           ++  S  DE  E +   + F ++ +  S    +E F    +  L++   +   SI     
Sbjct: 49  VKSESSADELEERDAHLDRFRRDSTFESETSDHEDFSGGSENELDEETTKNANSI----- 108

Query: 137 GEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQILSQYGEI 196
                    +K     ++++++ +K +      G+ YLSR+PP+M P +LRQILSQYG+I
Sbjct: 109 ---------KKISLEEVEKQRKAIKRS------GVIYLSRIPPYMAPNKLRQILSQYGKI 168

Query: 197 QRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSF 256
            R+YL PE +A + QR R GG +   + EGW+EF  KRVAK VA +LN  QIGG+K S +
Sbjct: 169 GRVYLTPESSAKRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAELLNTNQIGGKKSSWY 228

Query: 257 YYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSI 316
           + D+WN+KYL KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I
Sbjct: 229 HDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKVEIEQGRKQLKQYMRNVENAKMIEGI 288

Query: 317 EERLKKKQKLQEDSEI---NSALADSQKLPKLIRSF 349
            ++  ++  L   +E       L++  K  K  R F
Sbjct: 289 RKKRSERDTLNVSTEFPEETKDLSEDTKPSKQARRF 304

[Close]

BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot
Match: Q6BSS5 (Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ESF2 PE=3 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 2.8e-35
Identity = 92/283 (32.51%), Postives = 162/283 (57.24%), Query Frame = 0


Query: 84  DEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIALEDAENERTGSIVRENSGEKIPESN 143
           DE  + + +     K+ S   N  NE+  +   +  ED +      I+ E + E     N
Sbjct: 14  DEEDDEDEKVFNISKKASHIDNFKNEESEDEEDLNEEDDDLFMNTDIIDEETIE-----N 73

Query: 144 NEKADQRNIKR--KKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLA 203
           +++A   N+K+   ++L KE       G+CYLS++PP+M P +LR +LS++G+I R++L 
Sbjct: 74  SKQAKNINLKKLTPEQLAKEQKKIKKTGVCYLSKIPPYMKPAKLRSVLSRFGKIDRLFLK 133

Query: 204 PEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWN 263
           PED +   +R + GG + + ++ GWVEF +K+ AK  A  LNG ++GG+K S +Y D+ N
Sbjct: 134 PEDNSTYTKRVKYGGNKKKNYTAGWVEFINKKDAKLCAGTLNGNKLGGKKSSYYYDDIIN 193

Query: 264 IKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK 323
           IKYLS FKW DLT++ A ++ IR+ KL++E+S  ++    ++  V+KS+ +N+++ + K 
Sbjct: 194 IKYLSAFKWFDLTQQIAKENEIRQAKLSMELSQQQKLNKSFINNVEKSKMINNMQNKRKA 253

Query: 324 KQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQNKQR 365
           +Q        N   +D ++  K  R    T+  A   +++K +
Sbjct: 254 RQAESGADNSNKEESDIRRNLKQ-RKLASTRADAEDELKHKSK 290

[Close]

BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot
Match: Q2GZQ4 (Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=ESF2 PE=3 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 4.0e-34
Identity = 80/231 (34.63%), Postives = 127/231 (54.98%), Query Frame = 0


Query: 155 KKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRA 214
           KK L+         G+ YLSR+PP M P +LR +L  YG+I RI+L PED     +R R 
Sbjct: 107 KKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGKINRIFLTPEDPTEHTRRVRN 166

Query: 215 GGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLT 274
           GG + + F+EGWVEF  K+ AKKV ++LN + IGG+K S ++ D+W +KYL+ FKW  LT
Sbjct: 167 GGNKKRSFTEGWVEFVKKKDAKKVCDLLNAQTIGGKKSSWYHDDVWALKYLNGFKWHHLT 226

Query: 275 EETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSA 334
           E+ + ++A R  ++  E++   RE   ++  V++++ +N I+ +   K+K  +DSE   A
Sbjct: 227 EQISAENAERTSRIRAEVAKTTRENKEFVRNVERAKVINGIQSKAAAKRKKTDDSE--EA 286

Query: 335 LADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAGVSNNDNLQPNFIL 386
               + + K              + Q+K+R    +L         QP  +L
Sbjct: 287 AGSGEAVGK----------TEGESAQDKRRTFKQILLAKKRKHEEQPAHVL 325

[Close]

BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot
Match: Q4HZ47 (Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=ESF2 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-33
Identity = 90/287 (31.36%), Postives = 155/287 (54.01%), Query Frame = 0


Query: 78  EESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIALEDAENERTGSIVRENSGE 137
           E+   K   G    + E+  ++   S  G +++     K + +  E ++      +   +
Sbjct: 27  EDDMQKGGRGAKRRKVESDDEDDPGSDIGSDDEDEATEKDSKKTQEEDKKEDQPEKPKRK 86

Query: 138 KIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQILSQYGEIQR 197
               ++ E  D      KK L+         G+ YLSR+PP M P +LR +L  YG I R
Sbjct: 87  SKDTTSTELPDVTRTLTKKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINR 146

Query: 198 IYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYY 257
           I+LAPED A+  +R RAGG + + ++EGWVEFT K+ AK V ++LN   IGG+K S ++ 
Sbjct: 147 IFLAPEDPASHARRVRAGGNKKRSYTEGWVEFTKKKDAKAVCDLLNARTIGGKKGSYYHD 206

Query: 258 DLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEE 317
           DLWN+ YL  FKW +LTE+ A ++A R  ++  EIS + +E   ++  V+K++ L+ +  
Sbjct: 207 DLWNLLYLKGFKWHNLTEQIAAENAERSSRMRAEISKSTKENKEFVRNVEKAKMLDGMAV 266

Query: 318 RLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQNKQR 365
           + K K++    +E ++   + + + ++ RSF Q  P+A   +  + +
Sbjct: 267 KAKAKKR---KAETHTEGQEDESVRQVKRSFKQV-PLAKKKMDGEDQ 309

[Close]

BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot
Match: Q75DA3 (Pre-rRNA-processing protein ESF2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=ESF2 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.4e-33
Identity = 89/263 (33.84%), Postives = 144/263 (54.75%), Query Frame = 0


Query: 69  IKKSTQQCIE-ESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIALEDAENERT 128
           I +  QQ ++      D  G  +   +   +E SP  N       E +    E+      
Sbjct: 22  IDRKKQQTLDFAQDGSDSEGGSDLDDDDIAEEESPIQN-------ETKAATGEEPATADG 81

Query: 129 GSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHMDPLRLRQ 188
            +I  +++ E  PE   ++  Q  ++R K+L     ++   G+ YLS++PP+M P ++RQ
Sbjct: 82  DNIAPQSADELRPEERADQLKQERLRRLKKLKASKKSNHKTGVVYLSKIPPYMKPAKMRQ 141

Query: 189 ILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQI 248
           ILS++G++ R++L  ED  +  QR + GG +   F EGW EF  K+ AK  A  LNG  I
Sbjct: 142 ILSRFGDLDRLFLKREDEHSHRQRVKGGGNKKVMFREGWAEFIRKKDAKLCAETLNGNII 201

Query: 249 GGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD 308
           GG+K + ++ D+ N+KYLS FKW DLTE+ A ++ +R+ KL LEIS A +    ++  V+
Sbjct: 202 GGKKGNFYHDDVMNVKYLSGFKWADLTEQIARENDVRQSKLQLEISQANKLNAEFIRNVE 261

Query: 309 KSRALNSIEERLKKKQKLQEDSE 331
           KS+ LN+I  +  K +   E +E
Sbjct: 262 KSKMLNNIRAKKHKDEDSSERTE 277

[Close]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL
Match: A0A1S4E282 (pre-rRNA-processing protein ESF2 OS=Cucumis melo OX=3656 GN=LOC103498123 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.0e-169
Identity = 329/374 (87.97%), Postives = 346/374 (92.51%), Query Frame = 0


Query: 1   MSK-ESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSD 60
           MSK ES EVNLTTDC+PESSKKRAK RKN+KKQLLM+GVDVMEMK+V SVQLGESNINSD
Sbjct: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60

Query: 61  SDKVKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIAL 120
           SDKVKKKKK KKSTQQ IEESS+KDEAGEYENR ETF+KE SP SN G+E FFE+R IAL
Sbjct: 61  SDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIAL 120

Query: 121 EDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPH 180
           EDAENERT +I+RE S  KI ES+N K D+R IKRKK+LLKEA N+DMRGICYLSRVPPH
Sbjct: 121 EDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPH 180

Query: 181 MDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240
           MDPLRLRQILSQYGEIQRIYLAPEDAA+QVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA
Sbjct: 181 MDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240

Query: 241 NMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300
           NMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Sbjct: 241 NMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300

Query: 301 DFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAV 360
           D YLAKVDKSRALNSIEERLKKKQKL+EDSE+NS L DSQKLPKLIRSFPQTQPVA  AV
Sbjct: 301 DSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAV 360

Query: 361 QNKQRLSTNVLAGV 374
           QNKQRLSTNVLA V
Sbjct: 361 QNKQRLSTNVLARV 373

[Close]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL
Match: A0A0A0KUC2 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517890 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.6e-166
Identity = 321/375 (85.60%), Postives = 347/375 (92.53%), Query Frame = 0


Query: 2   SKESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSD 61
           ++ES EVNL TDCSPES KKRAK RKN++KQLL++GVDVMEMK+VGSVQLGESN+N+DSD
Sbjct: 3   NEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSD 62

Query: 62  KV---KKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIA 121
           KV   KKKKK KKSTQQ +EES +KDEAGEYENRAETF+KE SP SN G+E FFE+RKIA
Sbjct: 63  KVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIA 122

Query: 122 LEDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPP 181
           LEDAENERT SI+RENS  KI ES+N K +QR IKRKK+LLKEA N+DMRGICYLSRVPP
Sbjct: 123 LEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPP 182

Query: 182 HMDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKV 241
           HMDPL+LRQILSQ+GEIQRIYLAPEDAA+QVQRKRAGGFRGQFFSEGWVEFTDKRVAK+V
Sbjct: 183 HMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRV 242

Query: 242 ANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE 301
           ANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
Sbjct: 243 ANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE 302

Query: 302 RDFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSA 361
           RDFYLAKVDKSRALNSIEERLKKKQK++EDSE+NS L DSQKLPKLIRSFPQTQPVA  A
Sbjct: 303 RDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFA 362

Query: 362 VQNKQRLSTNVLAGV 374
           VQNK RLSTNVLAGV
Sbjct: 363 VQNKPRLSTNVLAGV 376

[Close]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL
Match: A0A6J1JP68 (pre-rRNA-processing protein ESF2 OS=Cucurbita maxima OX=3661 GN=LOC111487094 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 5.6e-156
Identity = 305/373 (81.77%), Postives = 331/373 (88.74%), Query Frame = 0


Query: 3   KESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDK 62
           +ESFEV+LTTDCSPESSKK  K  K +KKQLL+EGVDVME    GSV+LGESNINS+   
Sbjct: 4   EESFEVDLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSVELGESNINSE--- 63

Query: 63  VKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEK--FFERRKIALE 122
           VK KKK +KST+QC+ E+S++ EAGEYE +AE  VKEGSP S+GG+EK    E R+ ALE
Sbjct: 64  VKNKKKRRKSTKQCVVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEERQFALE 123

Query: 123 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 182
           D ENE   SIVRE SGEKI ESNN K DQRNIKRKKRLLKE  N+DMRGICYLSRVPPHM
Sbjct: 124 DDENESADSIVRETSGEKILESNNGKTDQRNIKRKKRLLKEVANADMRGICYLSRVPPHM 183

Query: 183 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 242
           DPL+LRQILSQYGEIQRIYLAPEDAANQV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVAN
Sbjct: 184 DPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 243

Query: 243 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 302
           MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD
Sbjct: 244 MLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISAAKRERD 303

Query: 303 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 362
           FYL+KVDKSRAL SIEERLKKKQKL+EDSE+NS LADSQKLPKLIR+FPQTQPVA SAVQ
Sbjct: 304 FYLSKVDKSRALKSIEERLKKKQKLREDSEMNSELADSQKLPKLIRNFPQTQPVADSAVQ 363

Query: 363 NKQRLSTNVLAGV 374
           +K +LSTN LAGV
Sbjct: 364 DKPKLSTNFLAGV 372

[Close]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL
Match: A0A6J1E2Q1 (pre-rRNA-processing protein ESF2 OS=Cucurbita moschata OX=3662 GN=LOC111430278 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.8e-155
Identity = 305/373 (81.77%), Postives = 329/373 (88.20%), Query Frame = 0


Query: 3   KESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDK 62
           +ESFEV LTTDCSPESSKK  K  K +KKQLL+EGVDVME    GS +L ESNINS+   
Sbjct: 4   EESFEVGLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSFELWESNINSE--- 63

Query: 63  VKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEK--FFERRKIALE 122
           VK KKK KKST QC+ E+S++ EAGEYE +AE  VKEGSP S+GG+EK    E R+ ALE
Sbjct: 64  VKNKKKRKKSTIQCVVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEERQFALE 123

Query: 123 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 182
           + ENER  SIVRE SGEKI ESNN K DQRNIKRKKRLLKE  N+DMRGICYLSRVPPHM
Sbjct: 124 NDENERADSIVRETSGEKILESNNGKTDQRNIKRKKRLLKEVANADMRGICYLSRVPPHM 183

Query: 183 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 242
           DPL+LRQILSQYGEIQRIYLAPEDAANQV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVAN
Sbjct: 184 DPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 243

Query: 243 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 302
           MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD
Sbjct: 244 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISAAKRERD 303

Query: 303 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 362
           FYL+KVDKSRAL SIEERLKKKQKL+EDSE+NS LADSQKLPKLIR+FPQTQPVA SAVQ
Sbjct: 304 FYLSKVDKSRALKSIEERLKKKQKLREDSEMNSELADSQKLPKLIRNFPQTQPVADSAVQ 363

Query: 363 NKQRLSTNVLAGV 374
           +K +LSTN LAGV
Sbjct: 364 DKPKLSTNFLAGV 372

[Close]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL
Match: A0A6J1BYG4 (pre-rRNA-processing protein ESF2 OS=Momordica charantia OX=3673 GN=LOC111006727 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.4e-154
Identity = 303/373 (81.23%), Postives = 332/373 (89.01%), Query Frame = 0


Query: 3   KESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDK 62
           +E  EVNLTTD SPESSKKRAK  KN+KKQLL EGVDVM+MKEV SVQ+ ESNINSD DK
Sbjct: 4   EEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDK 63

Query: 63  VKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEK--FFERRKIALE 122
           VKKKKK KKS +QC+EE+S+K EAGE E++AE+ +KEG P S+GG EK   FE+++I LE
Sbjct: 64  VKKKKKGKKSAKQCVEENSIKAEAGEIESKAESSMKEGGPFSDGGGEKDAAFEKKQIPLE 123

Query: 123 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 182
            AE+ R  SIVRENSGEKI ESNN K+DQR IKRKKRLLKE+  ++M GICYLSRVPPHM
Sbjct: 124 HAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHM 183

Query: 183 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 242
           DPL+LRQILS YGEIQRIYLAPEDAANQVQRKRAGGFRGQ FSEGWVEFTDKRVAKKVA 
Sbjct: 184 DPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVAT 243

Query: 243 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 302
           MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD
Sbjct: 244 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 303

Query: 303 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 362
           FYL+KVDKSRALNSIEERLKKKQKL+EDSE++S     QKLPKLIR+FPQTQPVA SAV+
Sbjct: 304 FYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVYQKLPKLIRNFPQTQPVADSAVE 363

Query: 363 NKQRLSTNVLAGV 374
           NKQRLS N+LAGV
Sbjct: 364 NKQRLSKNILAGV 375

[Close]

BLAST of Lsi02G016070 vs. NCBI nr
Match: XP_038891142.1 (pre-rRNA-processing protein ESF2 [Benincasa hispida])

HSP 1 Score: 636.3 bits (1640), Expect = 1.7e-178
Identity = 338/374 (90.37%), Postives = 355/374 (94.92%), Query Frame = 0


Query: 1   MSK-ESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSD 60
           MSK ESFEV+LTTDCSP+SSKKRAK RKN+ KQLLME  D+MEMKEVGSVQLGESNIN D
Sbjct: 1   MSKEESFEVDLTTDCSPKSSKKRAKRRKNKNKQLLMEDADIMEMKEVGSVQLGESNINFD 60

Query: 61  SDKVKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIAL 120
           SDKVKKKKK KKS QQC+EESS+KDEAGEYENRAETF+KEGS  SNGG+EKFFE+RKIAL
Sbjct: 61  SDKVKKKKKRKKSPQQCVEESSVKDEAGEYENRAETFMKEGSTFSNGGSEKFFEKRKIAL 120

Query: 121 EDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPH 180
           EDAENER+ SIVRENSGEKI ESNN KADQRNIKRKKRLLKE  N+DMRGICYLSRVPPH
Sbjct: 121 EDAENERSSSIVRENSGEKILESNNGKADQRNIKRKKRLLKETTNADMRGICYLSRVPPH 180

Query: 181 MDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240
           MDPL+LRQILSQYGEIQRIYLAPEDAA+QVQRKR+GGFRGQFFSEGWVEFTDKRVAKKVA
Sbjct: 181 MDPLKLRQILSQYGEIQRIYLAPEDAASQVQRKRSGGFRGQFFSEGWVEFTDKRVAKKVA 240

Query: 241 NMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300
           N+LNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Sbjct: 241 NILNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300

Query: 301 DFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAV 360
           DFYLAKVDKSRALNSIEERLKKKQKL+EDSE+ S LADSQKLPKLIRSFPQTQPVA S V
Sbjct: 301 DFYLAKVDKSRALNSIEERLKKKQKLREDSEMKSTLADSQKLPKLIRSFPQTQPVADSTV 360

Query: 361 QNKQRLSTNVLAGV 374
           QNKQRLSTNVLAGV
Sbjct: 361 QNKQRLSTNVLAGV 374

[Close]

BLAST of Lsi02G016070 vs. NCBI nr
Match: XP_016902333.1 (PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo])

HSP 1 Score: 605.1 bits (1559), Expect = 4.1e-169
Identity = 329/374 (87.97%), Postives = 346/374 (92.51%), Query Frame = 0


Query: 1   MSK-ESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSD 60
           MSK ES EVNLTTDC+PESSKKRAK RKN+KKQLLM+GVDVMEMK+V SVQLGESNINSD
Sbjct: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60

Query: 61  SDKVKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIAL 120
           SDKVKKKKK KKSTQQ IEESS+KDEAGEYENR ETF+KE SP SN G+E FFE+R IAL
Sbjct: 61  SDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIAL 120

Query: 121 EDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPH 180
           EDAENERT +I+RE S  KI ES+N K D+R IKRKK+LLKEA N+DMRGICYLSRVPPH
Sbjct: 121 EDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPH 180

Query: 181 MDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240
           MDPLRLRQILSQYGEIQRIYLAPEDAA+QVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA
Sbjct: 181 MDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240

Query: 241 NMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300
           NMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Sbjct: 241 NMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300

Query: 301 DFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAV 360
           D YLAKVDKSRALNSIEERLKKKQKL+EDSE+NS L DSQKLPKLIRSFPQTQPVA  AV
Sbjct: 301 DSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAV 360

Query: 361 QNKQRLSTNVLAGV 374
           QNKQRLSTNVLA V
Sbjct: 361 QNKQRLSTNVLARV 373

[Close]

BLAST of Lsi02G016070 vs. NCBI nr
Match: XP_031742023.1 (pre-rRNA-processing protein ESF2 [Cucumis sativus] >KGN51341.1 hypothetical protein Csa_007812 [Cucumis sativus])

HSP 1 Score: 595.5 bits (1534), Expect = 3.3e-166
Identity = 321/375 (85.60%), Postives = 347/375 (92.53%), Query Frame = 0


Query: 2   SKESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSD 61
           ++ES EVNL TDCSPES KKRAK RKN++KQLL++GVDVMEMK+VGSVQLGESN+N+DSD
Sbjct: 3   NEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSD 62

Query: 62  KV---KKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEKFFERRKIA 121
           KV   KKKKK KKSTQQ +EES +KDEAGEYENRAETF+KE SP SN G+E FFE+RKIA
Sbjct: 63  KVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIA 122

Query: 122 LEDAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPP 181
           LEDAENERT SI+RENS  KI ES+N K +QR IKRKK+LLKEA N+DMRGICYLSRVPP
Sbjct: 123 LEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPP 182

Query: 182 HMDPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKV 241
           HMDPL+LRQILSQ+GEIQRIYLAPEDAA+QVQRKRAGGFRGQFFSEGWVEFTDKRVAK+V
Sbjct: 183 HMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRV 242

Query: 242 ANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE 301
           ANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
Sbjct: 243 ANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE 302

Query: 302 RDFYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSA 361
           RDFYLAKVDKSRALNSIEERLKKKQK++EDSE+NS L DSQKLPKLIRSFPQTQPVA  A
Sbjct: 303 RDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFA 362

Query: 362 VQNKQRLSTNVLAGV 374
           VQNK RLSTNVLAGV
Sbjct: 363 VQNKPRLSTNVLAGV 376

[Close]

BLAST of Lsi02G016070 vs. NCBI nr
Match: XP_022990094.1 (pre-rRNA-processing protein ESF2 [Cucurbita maxima] >XP_022990095.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima])

HSP 1 Score: 560.5 bits (1443), Expect = 1.2e-155
Identity = 305/373 (81.77%), Postives = 331/373 (88.74%), Query Frame = 0


Query: 3   KESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDK 62
           +ESFEV+LTTDCSPESSKK  K  K +KKQLL+EGVDVME    GSV+LGESNINS+   
Sbjct: 4   EESFEVDLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSVELGESNINSE--- 63

Query: 63  VKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEK--FFERRKIALE 122
           VK KKK +KST+QC+ E+S++ EAGEYE +AE  VKEGSP S+GG+EK    E R+ ALE
Sbjct: 64  VKNKKKRRKSTKQCVVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEERQFALE 123

Query: 123 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 182
           D ENE   SIVRE SGEKI ESNN K DQRNIKRKKRLLKE  N+DMRGICYLSRVPPHM
Sbjct: 124 DDENESADSIVRETSGEKILESNNGKTDQRNIKRKKRLLKEVANADMRGICYLSRVPPHM 183

Query: 183 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 242
           DPL+LRQILSQYGEIQRIYLAPEDAANQV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVAN
Sbjct: 184 DPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 243

Query: 243 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 302
           MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD
Sbjct: 244 MLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISAAKRERD 303

Query: 303 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 362
           FYL+KVDKSRAL SIEERLKKKQKL+EDSE+NS LADSQKLPKLIR+FPQTQPVA SAVQ
Sbjct: 304 FYLSKVDKSRALKSIEERLKKKQKLREDSEMNSELADSQKLPKLIRNFPQTQPVADSAVQ 363

Query: 363 NKQRLSTNVLAGV 374
           +K +LSTN LAGV
Sbjct: 364 DKPKLSTNFLAGV 372

[Close]

BLAST of Lsi02G016070 vs. NCBI nr
Match: XP_023529204.1 (pre-rRNA-processing protein ESF2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023529919.1 pre-rRNA-processing protein ESF2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.9 bits (1439), Expect = 3.4e-155
Identity = 304/373 (81.50%), Postives = 330/373 (88.47%), Query Frame = 0


Query: 3   KESFEVNLTTDCSPESSKKRAKIRKNRKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDK 62
           +ESFEVNLTTDCSPESSKK  K  K +KKQLL+EGVDVME    GSV+L ESNINS+   
Sbjct: 4   EESFEVNLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSVELWESNINSE--- 63

Query: 63  VKKKKKIKKSTQQCIEESSMKDEAGEYENRAETFVKEGSPSSNGGNEK--FFERRKIALE 122
           VK KKK KKST+QC+ E+S++ EAGEYE +AE  VKEGSP S+GG+EK    E R+ A E
Sbjct: 64  VKNKKKRKKSTKQCVVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEERQFAFE 123

Query: 123 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 182
           D ENER  SIVRE SGEKI ESNN K DQRN+KRKKRLLKE  N+DMRGICYLSRVPPHM
Sbjct: 124 DDENERADSIVRETSGEKILESNNGKTDQRNMKRKKRLLKEVANADMRGICYLSRVPPHM 183

Query: 183 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 242
           DPL+LRQILSQYGEIQRIYLAPEDAANQV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVAN
Sbjct: 184 DPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 243

Query: 243 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 302
            LNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD
Sbjct: 244 TLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISAAKRERD 303

Query: 303 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 362
           FYL+KVDKSRAL SIEERLKKKQ L+EDSE+NS LADSQKLPKLIR+FPQTQPVA+SAVQ
Sbjct: 304 FYLSKVDKSRALKSIEERLKKKQNLREDSEMNSELADSQKLPKLIRNFPQTQPVANSAVQ 363

Query: 363 NKQRLSTNVLAGV 374
           +K +LSTN LAGV
Sbjct: 364 DKPKLSTNFLAGV 372

[Close]

BLAST of Lsi02G016070 vs. TAIR 10
Match: AT3G56510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-76
Identity = 149/253 (58.89%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 121 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 180
           +  +E T  I  E   ++  +S  +KAD++  K K++LLKEA  +D RG+CYLSR+PPHM
Sbjct: 4   EESHELTDGISEEKESKETMKS--QKADRKKKKLKEKLLKEASKADNRGVCYLSRIPPHM 63

Query: 181 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 240
           D +RLR IL+QYGE+ RIYLAPED+  QV RKRAGGFRGQ FSEGWVEF  K VAK+VA+
Sbjct: 64  DHVRLRHILAQYGELGRIYLAPEDSEAQVHRKRAGGFRGQRFSEGWVEFAKKSVAKRVAD 123

Query: 241 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 300
           MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+D
Sbjct: 124 MLNGEQIGGKKKSSVYYDIWNIKYLTKFKWDDLTEEIAYKSAIREQKLNMVLSAAKREKD 183

Query: 301 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 360
           FYL+K++KSRA+  I+ R++KK+K+QE+S  N+  A     P+ I  F Q + + +   Q
Sbjct: 184 FYLSKIEKSRAMTEIDARMEKKRKIQEESGSNAEAAPVFP-PRAIFQFRQKKSIENETSQ 243

Query: 361 NKQRLSTNVLAGV 374
           +K  LST+ LA V
Sbjct: 244 SKPGLSTDFLASV 253

[Close]

BLAST of Lsi02G016070 vs. TAIR 10
Match: AT3G56510.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-76
Identity = 149/253 (58.89%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 121 DAENERTGSIVRENSGEKIPESNNEKADQRNIKRKKRLLKEAGNSDMRGICYLSRVPPHM 180
           +  +E T  I  E   ++  +S  +KAD++  K K++LLKEA  +D RG+CYLSR+PPHM
Sbjct: 4   EESHELTDGISEEKESKETMKS--QKADRKKKKLKEKLLKEASKADNRGVCYLSRIPPHM 63

Query: 181 DPLRLRQILSQYGEIQRIYLAPEDAANQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 240
           D +RLR IL+QYGE+ RIYLAPED+  QV RKRAGGFRGQ FSEGWVEF  K VAK+VA+
Sbjct: 64  DHVRLRHILAQYGELGRIYLAPEDSEAQVHRKRAGGFRGQRFSEGWVEFAKKSVAKRVAD 123

Query: 241 MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 300
           MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+D
Sbjct: 124 MLNGEQIGGKKKSSVYYDIWNIKYLTKFKWDDLTEEIAYKSAIREQKLNMVLSAAKREKD 183

Query: 301 FYLAKVDKSRALNSIEERLKKKQKLQEDSEINSALADSQKLPKLIRSFPQTQPVAHSAVQ 360
           FYL+K++KSRA+  I+ R++KK+K+QE+S  N+  A     P+ I  F Q + + +   Q
Sbjct: 184 FYLSKIEKSRAMTEIDARMEKKRKIQEESGSNAEAAPVFP-PRAIFQFRQKKSIENETSQ 243

Query: 361 NKQRLSTNVLAGV 374
           +K  LST+ LA V
Sbjct: 244 SKPGLSTDFLASV 253

The following BLAST results are available for this feature:

BLAST of Lsi02G016070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74362	1.1e-36	33.70	Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q6BSS5	2.8e-35	32.51	Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / C...	[more]
Q2GZQ4	4.0e-34	34.63	Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain ATCC 6205 / CBS ...	[more]
Q4HZ47	2.6e-33	31.36	Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS ...	[more]
Q75DA3	3.4e-33	33.84	Pre-rRNA-processing protein ESF2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109...	[more]

BLAST of Lsi02G016070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E282	2.0e-169	87.97	pre-rRNA-processing protein ESF2 OS=Cucumis melo OX=3656 GN=LOC103498123 PE=3 SV...	[more]
A0A0A0KUC2	1.6e-166	85.60	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517890 PE=3 SV...	[more]
A0A6J1JP68	5.6e-156	81.77	pre-rRNA-processing protein ESF2 OS=Cucurbita maxima OX=3661 GN=LOC111487094 PE=...	[more]
A0A6J1E2Q1	4.8e-155	81.77	pre-rRNA-processing protein ESF2 OS=Cucurbita moschata OX=3662 GN=LOC111430278 P...	[more]
A0A6J1BYG4	1.4e-154	81.23	pre-rRNA-processing protein ESF2 OS=Momordica charantia OX=3673 GN=LOC111006727 ...	[more]

BLAST of Lsi02G016070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891142.1	1.7e-178	90.37	pre-rRNA-processing protein ESF2 [Benincasa hispida]	[more]
XP_016902333.1	4.1e-169	87.97	PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]	[more]
XP_031742023.1	3.3e-166	85.60	pre-rRNA-processing protein ESF2 [Cucumis sativus] >KGN51341.1 hypothetical prot...	[more]
XP_022990094.1	1.2e-155	81.77	pre-rRNA-processing protein ESF2 [Cucurbita maxima] >XP_022990095.1 pre-rRNA-pro...	[more]
XP_023529204.1	3.4e-155	81.50	pre-rRNA-processing protein ESF2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023...	[more]

BLAST of Lsi02G016070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56510.1	2.5e-76	58.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56510.2	2.5e-76	58.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..88
None	No IPR available	PANTHER	PTHR12311:SF7	ACTIVATOR OF BASAL TRANSCRIPTION 1	coord: 114..373
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 170..254 e-value: 0.0049 score: 26.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 172..251 e-value: 2.3E-5 score: 24.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 169..251 score: 9.268642
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 129..254 e-value: 9.5E-10 score: 40.5
IPR039119	ABT1/Esf2	PANTHER	PTHR12311	ACTIVATOR OF BASAL TRANSCRIPTION 1	coord: 114..373
IPR034353	ABT1/ESF2, RNA recognition motif	CDD	cd12263	RRM_ABT1_like	coord: 169..266 e-value: 8.91067E-55 score: 173.932
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 163..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016070.1	Lsi02G016070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000480	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000472	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0034462	small-subunit processome assembly
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding