Lsi02G015350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G015350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	metalloendoproteinase 2-MMP-like
Location	chr02: 21205735 .. 21206405 (-)
RNA-Seq Expression	Lsi02G015350
Synteny	Lsi02G015350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGTTCGACGATGCCTTAGAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

mRNA sequence

ATGACACAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

Coding sequence (CDS)

ATGACACAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

Protein sequence

MTQSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFPDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALYA

Homology

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BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 7.5e-46
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 0


Query: 4   SAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFPD 63
           SAIK+YQK +NLN++G  D  TL Q   PRCGVPD      N N      M S YTFF D
Sbjct: 83  SAIKTYQKNYNLNVTGKFDINTLKQIMTPRCGVPDII---INTNKTTSFGMISDYTFFKD 142

Query: 64  NLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQ 123
             RW      LTY F     L+  F   + RA + W       F E    + A+I I F 
Sbjct: 143 MPRWQAGTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFA 202

Query: 124 RGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA------GVVANELIVETVALHE 183
              HGD  PFDGPGGIL HAFAPTDGR HFD DE W A        V +   +E+VA+HE
Sbjct: 203 SKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHE 262

Query: 184 LGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           +GH+LGLGHSS  +AI++P I P + K  L  DDI G+R LY
Sbjct: 263 IGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLY 301

[Close]

BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.9e-45
Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           QSAI +YQK FNL ++G LD  TL Q  KPRCG PD  +  S  N    L+ T  Y+FFP
Sbjct: 88  QSAINTYQKNFNLKVTGKLDSSTLRQIVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFP 147

Query: 63  DNLRWPNTKFNLTYTFI--NNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISF 122
              RWP  K +LTY F   NN         +RA   WA  +   F+ +     ADI I F
Sbjct: 148 GKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGF 207

Query: 123 QRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETV 182
             GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+V
Sbjct: 208 FSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESV 267

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GH+LGLGHSS+E AI++P I  G  K  L  DDI G++ LY
Sbjct: 268 AVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

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BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-39
Identity = 90/237 (37.97%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKN------------HED 62
           ++A++ YQ+ F LN++G+LD+ TL     PRCG PD  N  S  +               
Sbjct: 92  KNAVEMYQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQ 151

Query: 63  DLKMTSHYTFFPDNLRWPNTKFNLTYTF--INNYPLNFVPPVTRALAAWAANSQFTFSEA 122
                 HY+FFP   RWP  + +LTY F   N          +RA   W   +  TF+  
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRV 211

Query: 123 VEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------- 182
                +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W           
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271

Query: 183 VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L  DD+ G++ LY
Sbjct: 272 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

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BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 91/235 (38.72%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNS------NKNHEDDLKMT- 62
           ++A++ YQ  FNLN++G LD  T+     PRCG PD  N  S       K  E +   T 
Sbjct: 89  KAAVELYQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH 148

Query: 63  ----SHYTFFPDNLRWPNTKFNLTYTFINNYPL--NFVPPVTRALAAWAANSQFTFSEAV 122
                 YT FP   RWP  + +LTY F    PL        +RA   W+  +   F+ + 
Sbjct: 149 LHAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSE 208

Query: 123 EGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VV 182
               +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V
Sbjct: 209 SFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSV 268

Query: 183 ANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
              + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L +DD+ G++ LY
Sbjct: 269 TAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.3e-37
Identity = 88/226 (38.94%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           + A+  YQK   L ++G  D +TL+Q   PRCG PD     +   H         Y +FP
Sbjct: 75  EQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDDVEPKTAPFHTG-----KKYVYFP 134

Query: 63  DNLRWP-NTKFNLTYTFINNYPLNFVPPV------TRALAAWAANSQFTFSEAVEGQMAD 122
              RW  +    LTY F       ++ P        RA   WA+    +F E  +  +AD
Sbjct: 135 GRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIAD 194

Query: 123 INISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETV 182
           I I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+V
Sbjct: 195 IKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESV 254

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GHVLGLGHSS++ A ++P ++P S K  LN DD+ G+++LY
Sbjct: 255 AVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL
Match: A0A6J1BZK9 (metalloendoproteinase 1-like OS=Momordica charantia OX=3673 GN=LOC111006143 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.7e-82
Identity = 148/215 (68.84%), Postives = 172/215 (80.00%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK FNLN+SG LD+ETL   S+PRCGVPD   S+   N+E  +  +SHY FFP
Sbjct: 80  ESAIKKYQKNFNLNLSGALDRETLDLMSRPRCGVPDIVASS---NNETMMWNSSHYAFFP 139

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WPNTK++LTYTFINNYP N+V  V RALA WA  SQFTF+EA EG+ ADI ISF+R
Sbjct: 140 GNLKWPNTKYHLTYTFINNYPSNYVAAVARALATWAGASQFTFAEAFEGETADIKISFER 199

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
           G HGD NPFDG GG+LAHAFAP+DGRLH D DESW  GVV NE  VETVALHELGH+LGL
Sbjct: 200 GNHGDGNPFDGRGGVLAHAFAPSDGRLHLDADESWTEGVVFNEFDVETVALHELGHILGL 259

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALYA 218
           GHS IE AI+WP+++PG+TKGLN DDI G+ ALYA
Sbjct: 260 GHSKIEAAIMWPFLDPGATKGLNADDIDGIHALYA 291

[Close]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL
Match: A0A0A0KNY8 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G522910 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.0e-77
Identity = 140/214 (65.42%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SGILD+ETL Q  KPRCGV D F  NSNKN EDDL+M+SHYT FP
Sbjct: 81  ESAIKLYQKWSHLNVSGILDQETLDQMFKPRCGVRDVFKFNSNKNLEDDLEMSSHYTLFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 GNLKWPDYKRHLTYVFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQI 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V  VALHELGHVLGL
Sbjct: 201 KDHADGLPFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGMEVQKVNVMNVALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 261 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 294

[Close]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL
Match: A0A5A7T3V3 (Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00350 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.2e-74
Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPD-SFNSNSNKNHEDDLKMTSHYTFF 62
           +SA+K YQK   LN+SGILD++TL Q  KPRCG+PD    SNSNKN EDDL+++SHY  F
Sbjct: 80  ESAVKLYQKWSKLNVSGILDQQTLDQIFKPRCGLPDVIMKSNSNKNTEDDLEISSHYALF 139

Query: 63  PDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQ 122
           P N +WP+ K +LTYTF NN+P++FVP VT A+  WAA+S FTFS+A + Q+ DINISFQ
Sbjct: 140 PGNQKWPDYKRHLTYTFTNNFPIDFVPSVTEAMKEWAAHSLFTFSQAADDQVPDINISFQ 199

Query: 123 RGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLG 182
            G+HGD  PFDGPGG++ HAFAPTDGRLH DGD+ W+AG+   ++ V   ALHELGHVLG
Sbjct: 200 VGDHGDGVPFDGPGGVVGHAFAPTDGRLHLDGDDKWSAGLETQKVNVMNAALHELGHVLG 259

Query: 183 LGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           L HS+++QA++WPYI+  + K L DDDIAGL ALY
Sbjct: 260 LAHSTVQQAVMWPYIDVYALKALTDDDIAGLTALY 294

[Close]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL
Match: A0A1S3C9J6 (metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498179 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.2e-74
Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPD-SFNSNSNKNHEDDLKMTSHYTFF 62
           +SA+K YQK   LN+SGILD++TL Q  KPRCG+PD    SNSNKN EDDL+++SHY  F
Sbjct: 80  ESAVKLYQKWSKLNVSGILDQQTLDQIFKPRCGLPDVIMKSNSNKNTEDDLEISSHYALF 139

Query: 63  PDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQ 122
           P N +WP+ K +LTYTF NN+P++FVP VT A+  WAA+S FTFS+A + Q+ DINISFQ
Sbjct: 140 PGNQKWPDYKRHLTYTFTNNFPIDFVPSVTEAMKEWAAHSLFTFSQAADDQVPDINISFQ 199

Query: 123 RGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLG 182
            G+HGD  PFDGPGG++ HAFAPTDGRLH DGD+ W+AG+   ++ V   ALHELGHVLG
Sbjct: 200 VGDHGDGVPFDGPGGVVGHAFAPTDGRLHLDGDDKWSAGLETQKVNVMNAALHELGHVLG 259

Query: 183 LGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           L HS+++QA++WPYI+  + K L DDDIAGL ALY
Sbjct: 260 LAHSTVQQAVMWPYIDVYALKALTDDDIAGLTALY 294

[Close]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL
Match: A0A0A0KVD8 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G633150 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.8e-74
Identity = 134/214 (62.62%), Postives = 167/214 (78.04%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI+ YQK  +LN+SGILD+ETL Q  + RCG+ D F  NS+KN EDDL+M+SHY  FP
Sbjct: 80  ESAIRLYQKWSHLNVSGILDQETLDQMFQQRCGIRDVFKFNSSKNLEDDLEMSSHYVLFP 139

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 140 NNKKWPDYKRHLTYMFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQV 199

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D + FDGPGG++ HAFAPTDGRLH DGD+SW+AG+  N+  V  VALHELGHVLGL
Sbjct: 200 KDHADGSAFDGPGGVVGHAFAPTDGRLHLDGDDSWSAGLEENKFNVMNVALHELGHVLGL 259

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 260 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 293

[Close]

BLAST of Lsi02G015350 vs. NCBI nr
Match: XP_038889211.1 (metalloendoproteinase 1-like [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97
Identity = 171/214 (79.91%), Postives = 189/214 (88.32%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIKSYQKRFNLNMSG+LD+ETL Q S+PRCGVPD   SN NKN +DDLKM+SHYTFFP
Sbjct: 81  ESAIKSYQKRFNLNMSGVLDEETLVQISRPRCGVPDFSMSNPNKNPKDDLKMSSHYTFFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WPNTKF+LTYTF NNYPLN VP VT A+A WA NSQFTFSE V+GQ+ADINISFQR
Sbjct: 141 NNPKWPNTKFHLTYTFTNNYPLNLVPSVTEAMATWALNSQFTFSEVVDGQIADINISFQR 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
           GEHGD NPFDGPGG+  HA APTDGRLHFDGDESW+AGVV NEL V TVALHELGHVLGL
Sbjct: 201 GEHGDGNPFDGPGGMFDHASAPTDGRLHFDGDESWSAGVVDNELNVMTVALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           GHSSI+QAI+WPY+ PG+ KGLNDDDI GLRALY
Sbjct: 261 GHSSIQQAIMWPYMNPGTIKGLNDDDIVGLRALY 294

[Close]

BLAST of Lsi02G015350 vs. NCBI nr
Match: XP_022133603.1 (metalloendoproteinase 1-like [Momordica charantia])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 148/215 (68.84%), Postives = 172/215 (80.00%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK FNLN+SG LD+ETL   S+PRCGVPD   S+   N+E  +  +SHY FFP
Sbjct: 80  ESAIKKYQKNFNLNLSGALDRETLDLMSRPRCGVPDIVASS---NNETMMWNSSHYAFFP 139

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WPNTK++LTYTFINNYP N+V  V RALA WA  SQFTF+EA EG+ ADI ISF+R
Sbjct: 140 GNLKWPNTKYHLTYTFINNYPSNYVAAVARALATWAGASQFTFAEAFEGETADIKISFER 199

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
           G HGD NPFDG GG+LAHAFAP+DGRLH D DESW  GVV NE  VETVALHELGH+LGL
Sbjct: 200 GNHGDGNPFDGRGGVLAHAFAPSDGRLHLDADESWTEGVVFNEFDVETVALHELGHILGL 259

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALYA 218
           GHS IE AI+WP+++PG+TKGLN DDI G+ ALYA
Sbjct: 260 GHSKIEAAIMWPFLDPGATKGLNADDIDGIHALYA 291

[Close]

BLAST of Lsi02G015350 vs. NCBI nr
Match: XP_004142843.3 (metalloendoproteinase 1 [Cucumis sativus] >KAE8648550.1 hypothetical protein Csa_008112 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 6.7e-76
Identity = 137/214 (64.02%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SGILD+ETL Q  KPRCGV D F  NSNKN EDDL+M+SHYT FP
Sbjct: 81  ESAIKLYQKWSHLNVSGILDQETLDQMFKPRCGVRDVFKFNSNKNLEDDLEMSSHYTLFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WP+ K +LTY F NN+P++F+P VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 GNLKWPDYKRHLTYVFTNNFPIDFMPSVTEAMARWAAQSLFTFSEASDAQSADINISFQI 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V   ALHELGH+LGL
Sbjct: 201 KDHADGLPFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGMEVQKVNVMNAALHELGHILGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 261 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 294

[Close]

BLAST of Lsi02G015350 vs. NCBI nr
Match: XP_031741767.1 (metalloendoproteinase 5-MMP-like [Cucumis sativus] >KAE8648903.1 hypothetical protein Csa_008730 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-75
Identity = 138/214 (64.49%), Postives = 167/214 (78.04%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SGILD+ETL Q  +PRCGV D F  NS+KN EDDL+M+SHY  FP
Sbjct: 79  ESAIKLYQKWSHLNVSGILDQETLDQMFQPRCGVRDVFKFNSSKNLEDDLEMSSHYALFP 138

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WP+ K +LTY F NN+P+NFVP VT A+A WAA+S FTFSEA + Q ADINISFQ 
Sbjct: 139 GNLKWPDYKRHLTYVFTNNFPINFVPSVTEAMARWAAHSLFTFSEASDAQSADINISFQI 198

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGG++ HAFAP DGRLH DGD+SW+AG+   ++ V   ALHELGHVLGL
Sbjct: 199 KDHADGMPFDGPGGVVGHAFAPIDGRLHLDGDDSWSAGLEEKKVNVMNAALHELGHVLGL 258

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYIE  + K LNDDDIAGL ALY
Sbjct: 259 AHSTLPQAVMWPYIESNALKNLNDDDIAGLHALY 292

[Close]

BLAST of Lsi02G015350 vs. NCBI nr
Match: XP_004142458.3 (metalloendoproteinase 1 [Cucumis sativus] >KAE8648904.1 hypothetical protein Csa_009110 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 2.2e-74
Identity = 137/214 (64.02%), Postives = 165/214 (77.10%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SG+LD+ETL Q  KPRCGV D F  NS+KN EDDL+M+SHY  FP
Sbjct: 81  ESAIKLYQKWTHLNVSGVLDQETLDQMFKPRCGVRDVFKFNSSKNLEDDLEMSSHYALFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            N +WP+ K +LTY F NN+P++FVP VT A+A WA  S FTFSEA + Q ADINISFQ 
Sbjct: 141 GNPQWPDYKRHLTYVFTNNFPIDFVPSVTEAMARWAGQSLFTFSEASDAQSADINISFQI 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGGI+ HAFAPTDGRLH DGD+SW+AG+   ++ V   ALHELGHVLGL
Sbjct: 201 KDHADGLPFDGPGGIVGHAFAPTDGRLHLDGDDSWSAGLEEKKVNVMNAALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYIE  + K LNDDDIAGL ALY
Sbjct: 261 AHSTLPQAVMWPYIESNALKNLNDDDIAGLHALY 294

[Close]

BLAST of Lsi02G015350 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-46
Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           QSAI +YQK FNL ++G LD  TL Q  KPRCG PD  +  S  N    L+ T  Y+FFP
Sbjct: 88  QSAINTYQKNFNLKVTGKLDSSTLRQIVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFP 147

Query: 63  DNLRWPNTKFNLTYTFI--NNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISF 122
              RWP  K +LTY F   NN         +RA   WA  +   F+ +     ADI I F
Sbjct: 148 GKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGF 207

Query: 123 QRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETV 182
             GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+V
Sbjct: 208 FSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESV 267

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GH+LGLGHSS+E AI++P I  G  K  L  DDI G++ LY
Sbjct: 268 AVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]

BLAST of Lsi02G015350 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 90/237 (37.97%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKN------------HED 62
           ++A++ YQ+ F LN++G+LD+ TL     PRCG PD  N  S  +               
Sbjct: 92  KNAVEMYQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQ 151

Query: 63  DLKMTSHYTFFPDNLRWPNTKFNLTYTF--INNYPLNFVPPVTRALAAWAANSQFTFSEA 122
                 HY+FFP   RWP  + +LTY F   N          +RA   W   +  TF+  
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRV 211

Query: 123 VEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------- 182
                +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W           
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271

Query: 183 VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L  DD+ G++ LY
Sbjct: 272 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

[Close]

BLAST of Lsi02G015350 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 161.4 bits (407), Expect = 8.2e-40
Identity = 91/235 (38.72%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNS------NKNHEDDLKMT- 62
           ++A++ YQ  FNLN++G LD  T+     PRCG PD  N  S       K  E +   T 
Sbjct: 89  KAAVELYQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH 148

Query: 63  ----SHYTFFPDNLRWPNTKFNLTYTFINNYPL--NFVPPVTRALAAWAANSQFTFSEAV 122
                 YT FP   RWP  + +LTY F    PL        +RA   W+  +   F+ + 
Sbjct: 149 LHAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSE 208

Query: 123 EGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VV 182
               +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V
Sbjct: 209 SFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSV 268

Query: 183 ANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
              + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L +DD+ G++ LY
Sbjct: 269 TAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of Lsi02G015350 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-38
Identity = 88/226 (38.94%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           + A+  YQK   L ++G  D +TL+Q   PRCG PD     +   H         Y +FP
Sbjct: 75  EQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDDVEPKTAPFHTG-----KKYVYFP 134

Query: 63  DNLRWP-NTKFNLTYTFINNYPLNFVPPV------TRALAAWAANSQFTFSEAVEGQMAD 122
              RW  +    LTY F       ++ P        RA   WA+    +F E  +  +AD
Sbjct: 135 GRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIAD 194

Query: 123 INISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETV 182
           I I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+V
Sbjct: 195 IKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESV 254

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GHVLGLGHSS++ A ++P ++P S K  LN DD+ G+++LY
Sbjct: 255 AVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of Lsi02G015350 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-37
Identity = 89/226 (39.38%), Postives = 126/226 (55.75%), Query Frame = 0


Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI  YQ+   L ++G LD  T+   S PRCGV D+  + +N    D L  T+HYT+F 
Sbjct: 99  ESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSDTHMTINN----DFLHTTAHYTYFN 158

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPP------VTRALAAWAANSQFTFSEAVEGQMADI 122
              +W   +  LTY     + L+++          RA + W++    +F E  +   AD+
Sbjct: 159 GKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADL 218

Query: 123 NISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA-----GVVANELIVETV 182
            I F  G+HGD  PFDG  G LAHAFAP +GRLH D  E+W       G     + +E+V
Sbjct: 219 KIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESV 278

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A HE+GH+LGLGHSS E A+++P + P + K  L  DD+AG+  LY
Sbjct: 279 ATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

The following BLAST results are available for this feature:

BLAST of Lsi02G015350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29136	7.5e-46	47.30	Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2	[more]
Q9ZUJ5	4.9e-45	45.58	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]
Q5XF51	1.8e-39	37.97	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
O04529	1.2e-38	38.72	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q8GWW6	8.3e-37	38.94	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]

BLAST of Lsi02G015350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZK9	6.7e-82	68.84	metalloendoproteinase 1-like OS=Momordica charantia OX=3673 GN=LOC111006143 PE=3...	[more]
A0A0A0KNY8	5.0e-77	65.42	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G522910 PE=3 S...	[more]
A0A5A7T3V3	5.2e-74	61.86	Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C9J6	5.2e-74	61.86	metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498179 PE=3 SV...	[more]
A0A0A0KVD8	8.8e-74	62.62	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G633150 PE=3 S...	[more]

BLAST of Lsi02G015350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889211.1	3.1e-97	79.91	metalloendoproteinase 1-like [Benincasa hispida]	[more]
XP_022133603.1	1.4e-81	68.84	metalloendoproteinase 1-like [Momordica charantia]	[more]
XP_004142843.3	6.7e-76	64.02	metalloendoproteinase 1 [Cucumis sativus] >KAE8648550.1 hypothetical protein Csa...	[more]
XP_031741767.1	1.9e-75	64.49	metalloendoproteinase 5-MMP-like [Cucumis sativus] >KAE8648903.1 hypothetical pr...	[more]
XP_004142458.3	2.2e-74	64.02	metalloendoproteinase 1 [Cucumis sativus] >KAE8648904.1 hypothetical protein Csa...	[more]

BLAST of Lsi02G015350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59970.1	3.5e-46	45.58	Matrixin family protein	[more]
AT1G24140.1	1.3e-40	37.97	Matrixin family protein	[more]
AT1G70170.1	8.2e-40	38.72	matrix metalloproteinase	[more]
AT2G45040.1	5.9e-38	38.94	Matrixin family protein	[more]
AT4G16640.1	2.2e-37	39.38	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 204..217 score: 46.95 coord: 90..105 score: 28.73 coord: 29..42 score: 52.87 coord: 114..142 score: 65.69 coord: 171..196 score: 53.1
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 63..217 e-value: 2.2E-29 score: 113.6
IPR002477	Peptidoglycan binding-like	PFAM	PF01471	PG_binding_1	coord: 2..28 e-value: 7.5E-6 score: 26.1
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 1..217 e-value: 4.4E-63 score: 215.0
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 67..217 e-value: 1.3E-41 score: 142.0
None	No IPR available	PANTHER	PTHR10201:SF272	METALLOENDOPROTEINASE 2-MMP-LIKE	coord: 3..216
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 3..216
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 60..216
IPR021158	Peptidase M10A, cysteine switch, zinc binding site	PROSITE	PS00546	CYSTEINE_SWITCH	coord: 32..39
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 66..216 e-value: 1.03548E-56 score: 175.085
IPR036365	PGBD-like superfamily	SUPERFAMILY	47090	PGBD-like	coord: 2..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G015350.1	Lsi02G015350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity