Lsi02G010400 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATTTGTTTCTTTGAATGGTCTGCGCTTTTTGTTGGTTGTGATTGTGGTGCTTGTCAATGAAACTCAACATGTGCAGCCAGTGAAATGCGACTCAAAAGAACTGAGACCATGTCGTTTGGCCTTCCGAATGTCAGGGGAGCCATCATCAGCTTGTTGCGACAAGGTGAAGGAGAGACCATGCTATTGTGGATACATGAAAAATCCAAAGATTAAACCCTATTTAGAGTATGATGACAACAAAGATCTCATTGCTCAATGTGGCGTTTCCATTCCAACTTGTTAA ATGAAGAAATTTGTTTCTTTGAATGGTCTGCGCTTTTTGTTGGTTGTGATTGTGGTGCTTGTCAATGAAACTCAACATGTGCAGCCAGTGAAATGCGACTCAAAAGAACTGAGACCATGTCGTTTGGCCTTCCGAATGTCAGGGGAGCCATCATCAGCTTGTTGCGACAAGGTGAAGGAGAGACCATGCTATTGTGGATACATGAAAAATCCAAAGATTAAACCCTATTTAGAGTATGATGACAACAAAGATCTCATTGCTCAATGTGGCGTTTCCATTCCAACTTGTTAA ATGAAGAAATTTGTTTCTTTGAATGGTCTGCGCTTTTTGTTGGTTGTGATTGTGGTGCTTGTCAATGAAACTCAACATGTGCAGCCAGTGAAATGCGACTCAAAAGAACTGAGACCATGTCGTTTGGCCTTCCGAATGTCAGGGGAGCCATCATCAGCTTGTTGCGACAAGGTGAAGGAGAGACCATGCTATTGTGGATACATGAAAAATCCAAAGATTAAACCCTATTTAGAGTATGATGACAACAAAGATCTCATTGCTCAATGTGGCGTTTCCATTCCAACTTGTTAA MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC Homology
BLAST of Lsi02G010400 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.1e-12 Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.8e-10 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 8.5e-10 Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy TrEMBL
Match: A0A6A4L2T0 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18628 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy TrEMBL
Match: A0A5C7ILK8 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004965 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.5e-14 Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy TrEMBL
Match: A0A6P6A579 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306314 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.9e-14 Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Lsi02G010400 vs. ExPASy TrEMBL
Match: A0A5C7IL66 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004968 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.7e-14 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Lsi02G010400 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 2.7e-21 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Lsi02G010400 vs. NCBI nr
Match: GFP85330.1 (probable non-specific lipid-transfer protein akcs9 [Phtheirospermum japonicum]) HSP 1 Score: 92.8 bits (229), Expect = 1.7e-15 Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of Lsi02G010400 vs. NCBI nr
Match: KAG8373754.1 (hypothetical protein BUALT_Bualt11G0058000 [Buddleja alternifolia]) HSP 1 Score: 89.0 bits (219), Expect = 2.5e-14 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Lsi02G010400 vs. NCBI nr
Match: KAG5527978.1 (hypothetical protein RHGRI_028792 [Rhododendron griersonianum]) HSP 1 Score: 87.8 bits (216), Expect = 5.5e-14 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Lsi02G010400 vs. NCBI nr
Match: KAE9449479.1 (hypothetical protein C3L33_18628, partial [Rhododendron williamsianum]) HSP 1 Score: 87.8 bits (216), Expect = 5.5e-14 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Lsi02G010400 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12 Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of Lsi02G010400 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 7.9e-11 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of Lsi02G010400 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 27/85 (31.76%), Postives = 44/85 (51.76%), Query Frame = 0
BLAST of Lsi02G010400 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 7.4e-09 Identity = 30/99 (30.30%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Lsi02G010400 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 4.8e-08 Identity = 29/92 (31.52%), Postives = 46/92 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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