Lsi02G009280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G009280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	outer dense fiber protein 2
Location	chr02: 9037291 .. 9038918 (-)
RNA-Seq Expression	Lsi02G009280
Synteny	Lsi02G009280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAAGGCAAACATTAACAAACAAAAGAAAACTGAGTTTTGCAAAACACACAGAGAAGAGGGAAAGGAGAGATTGAGCCAAAAACCAGTCTCTCTTTTTCTTCAAAATTTTCTAACTTTTTAATCTTTTCTTTCTTTTCCCTCAAAAACATTTGCAATAATTCTCAACATTCCTATTCCTTCTCTTCTTTTGTTTGTTCTAATTTTTCATTGGCATTTGATGTTTCTTTGCATCTTTCCCATTTAAACTCTTTTCATTTGGTTTGTTACCTGTTTTCCTTGTCAATCTCTTTTCCTCATGGAATCTACTGACATCAACCGCGGTCGAGCTTTGTCGTCTCCTGAATTAGCAAATGCCTTGATGAGTCCACGACATCAACATGTTGATCAAAACTTCGTCGGTACGTGCTTTGTCGAATTCTTCTTTCTCGAAATATATGTGTTTTTTCTTTTTTTATTTGATTGGTATTGTTTTATTGTTTAGGAGTATCTACCAACGTGAGGCTTTTATTGAAATTAATCCATGAGTACAAAGAGGCTTCCATGAAAGGAAATAATGGAAGCAAAGATCAAAGAATATCTGAAATGATGGTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCAATCTAATGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGACGAAATGTTCCGAAGGATAAGAAGACAACGAACGAACCGATAATAACCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGCGTGGCTGCACGGAAAAGCCTCGAAAGCATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCACGGAATGGAAGAACATGTCAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATCGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACATTGAAGCCCTCCAAAAGAGAAACAAAGTTTTGACAGAACAACTTCTCAAGTCGCTCGACGCGTACCGATCCTTGAAACGAAAGCTAAAAGAATATCAAGAGAAAAGGAACGGAGCTAATGCAAGAATGGAAGAAATGGGACTCCGTGTTCGAGCCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATGATCACTCAAACCGAAGACGAAAAACAGATCGACATTGAACAAGAGATCTCTGCATTGGAGCATATGTTCAAAGGCTTCGACTTCGAGATATCCAAACACGTCAAGATCAAGAAGCACCCCGTCGAATTTAAACACGACCGAATCAATGCCGATATGTAACTACTTCCTGCTTGAGTTATATAATAGAAACAGCAGCTCACAGCCATAATAAATTCCTAGTCTTTAACCTACTTTTGTTTGAAACAACGATGGGGATGGCCTTGAGAGTTGAGATAATAGAAGTAATTGATTAGTGATGGTACATTGACCACCTTGTTTTGTTGTGATCATGTACTGTTCGAATGTACTAGTTCAGTTGCTCTAGTTTTTAATGTACTGTTTGAACCTTTAAACCATTCAATAATTCAGCAGGAACATCTAATTAAACTACTTCCCTTCATTC

mRNA sequence

GTTGAAAGGCAAACATTAACAAACAAAAGAAAACTGAGTTTTGCAAAACACACAGAGAAGAGGGAAAGGAGAGATTGAGCCAAAAACCAGTCTCTCTTTTTCTTCAAAATTTTCTAACTTTTTAATCTTTTCTTTCTTTTCCCTCAAAAACATTTGCAATAATTCTCAACATTCCTATTCCTTCTCTTCTTTTGTTTGTTCTAATTTTTCATTGGCATTTGATGTTTCTTTGCATCTTTCCCATTTAAACTCTTTTCATTTGGTTTGTTACCTGTTTTCCTTGTCAATCTCTTTTCCTCATGGAATCTACTGACATCAACCGCGGTCGAGCTTTGTCGTCTCCTGAATTAGCAAATGCCTTGATGAGTCCACGACATCAACATGTTGATCAAAACTTCGTCGGAGTATCTACCAACGTGAGGCTTTTATTGAAATTAATCCATGAGTACAAAGAGGCTTCCATGAAAGGAAATAATGGAAGCAAAGATCAAAGAATATCTGAAATGATGGTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCAATCTAATGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGACGAAATGTTCCGAAGGATAAGAAGACAACGAACGAACCGATAATAACCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGCGTGGCTGCACGGAAAAGCCTCGAAAGCATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCACGGAATGGAAGAACATGTCAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATCGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACATTGAAGCCCTCCAAAAGAGAAACAAAGTTTTGACAGAACAACTTCTCAAGTCGCTCGACGCGTACCGATCCTTGAAACGAAAGCTAAAAGAATATCAAGAGAAAAGGAACGGAGCTAATGCAAGAATGGAAGAAATGGGACTCCGTGTTCGAGCCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATGATCACTCAAACCGAAGACGAAAAACAGATCGACATTGAACAAGAGATCTCTGCATTGGAGCATATGTTCAAAGGCTTCGACTTCGAGATATCCAAACACGTCAAGATCAAGAAGCACCCCGTCGAATTTAAACACGACCGAATCAATGCCGATATGTAACTACTTCCTGCTTGAGTTATATAATAGAAACAGCAGCTCACAGCCATAATAAATTCCTAGTCTTTAACCTACTTTTGTTTGAAACAACGATGGGGATGGCCTTGAGAGTTGAGATAATAGAAGTAATTGATTAGTGATGGTACATTGACCACCTTGTTTTGTTGTGATCATGTACTGTTCGAATGTACTAGTTCAGTTGCTCTAGTTTTTAATGTACTGTTTGAACCTTTAAACCATTCAATAATTCAGCAGGAACATCTAATTAAACTACTTCCCTTCATTC

Coding sequence (CDS)

ATGGAATCTACTGACATCAACCGCGGTCGAGCTTTGTCGTCTCCTGAATTAGCAAATGCCTTGATGAGTCCACGACATCAACATGTTGATCAAAACTTCGTCGGAGTATCTACCAACGTGAGGCTTTTATTGAAATTAATCCATGAGTACAAAGAGGCTTCCATGAAAGGAAATAATGGAAGCAAAGATCAAAGAATATCTGAAATGATGGTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCAATCTAATGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGACGAAATGTTCCGAAGGATAAGAAGACAACGAACGAACCGATAATAACCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGCGTGGCTGCACGGAAAAGCCTCGAAAGCATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCACGGAATGGAAGAACATGTCAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATCGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACATTGAAGCCCTCCAAAAGAGAAACAAAGTTTTGACAGAACAACTTCTCAAGTCGCTCGACGCGTACCGATCCTTGAAACGAAAGCTAAAAGAATATCAAGAGAAAAGGAACGGAGCTAATGCAAGAATGGAAGAAATGGGACTCCGTGTTCGAGCCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATGATCACTCAAACCGAAGACGAAAAACAGATCGACATTGAACAAGAGATCTCTGCATTGGAGCATATGTTCAAAGGCTTCGACTTCGAGATATCCAAACACGTCAAGATCAAGAAGCACCCCGTCGAATTTAAACACGACCGAATCAATGCCGATATGTAA

Protein sequence

MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNGSKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDEKERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKRNGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISKHVKIKKHPVEFKHDRINADM

Homology

[Close]

BLAST of Lsi02G009280 vs. ExPASy TrEMBL
Match: A0A1S3BAN5 (outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 294/319 (92.16%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES DINR RALSSPELAN L SPR  HVDQNFVGVSTNVR+LLKLIHEYKEAS+KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFVGVSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           SK+QRISEMM IIDEVKSQI KSQS GKR+EA LRRCNTDLRRNVPKDKK TNEPIITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           NG NARMEEMG++VRAGL+RIHSFKEMMITQT+DEKQIDIEQEISALEHMFK FDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
            VKIKKHP+E KHDRINAD
Sbjct: 301 QVKIKKHPLECKHDRINAD 318

[Close]

BLAST of Lsi02G009280 vs. ExPASy TrEMBL
Match: A0A5A7UG72 (Outer dense fiber protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00490 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.7e-150
Identity = 293/319 (91.85%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES DINR RALSSPELAN L SPR  HVDQNFV VSTNVR+LLKLIHEYKEAS+KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFV-VSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           SK+QRISEMM IIDEVKSQI KSQS GKR+EA LRRCNTDLRRNVPKDKK TNEPIITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           NG NARMEEMG++VRAGL+RIHSFKEMMITQT+DEKQIDIEQEISALEHMFK FDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
            VKIKKHP+E KHDRINAD
Sbjct: 301 QVKIKKHPLECKHDRINAD 317

[Close]

BLAST of Lsi02G009280 vs. ExPASy TrEMBL
Match: A0A0A0LVR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-147
Identity = 287/320 (89.69%), Postives = 300/320 (93.75%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELAN-ALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNN 60
           MES DINR RALSSPELAN  L+SPR  H+DQNFVGVSTNVRLLLKLIHEYKE SMKGN+
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITD 120
           GSKDQRISEMM+IIDEVKSQIQKS+S GKRREAELRRCNTDLRRNVPKDKK TNEPII D
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKK-TNEPIIID 120

Query: 121 EKERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180
           EKERLRRELNASVA+RKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM
Sbjct: 121 EKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180

Query: 181 LMCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEK 240
           LMCKVQACVAEHRVKKNNVPDAQGN EALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQE+
Sbjct: 181 LMCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQER 240

Query: 241 RNGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEIS 300
           RNG NARMEEMG++VRAGL+RIHSFKEMMITQT+D+KQIDIE EISALEHMFK FDFEIS
Sbjct: 241 RNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEIS 300

Query: 301 KHVKIKKHPVEFKHDRINAD 320
           K  K+KKHPV    DRINAD
Sbjct: 301 KQTKVKKHPV----DRINAD 315

[Close]

BLAST of Lsi02G009280 vs. ExPASy TrEMBL
Match: A0A6J1GR77 (uncharacterized protein LOC111456791 OS=Cucurbita moschata OX=3662 GN=LOC111456791 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.7e-140
Identity = 271/319 (84.95%), Postives = 297/319 (93.10%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES D+ R RALS  ELANAL SPR  HVDQNFVGVSTNVRLLLKLIHEYK+AS+KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           S+DQRISEMM+IID+VK+QIQKSQ  GK+R AELRRCNTDLRRNVP+DK+ +NEP++ DE
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVM-DE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEML
Sbjct: 121 KERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQ N+EALQKRNKVLTEQLLKSLDAYRSLKRK+KEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           +G NARMEEMGLRVR GLDRIHSFKE M TQ++D+KQIDIE EISALEHMFK FD EISK
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKE-MFTQSDDKKQIDIEHEISALEHMFKCFDLEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
           HVK+KK+P+E KH+RINAD
Sbjct: 301 HVKMKKYPIECKHERINAD 316

[Close]

BLAST of Lsi02G009280 vs. ExPASy TrEMBL
Match: A0A6J1K2G4 (uncharacterized protein LOC111490448 OS=Cucurbita maxima OX=3661 GN=LOC111490448 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.2e-138
Identity = 270/319 (84.64%), Postives = 294/319 (92.16%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES D+ R RALS  ELANAL SPR  HVDQNFVGVSTNVRLLLKLIHEYK+AS+KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           S+DQRISEMM+IID+VK+QIQKSQ  GK+R AELRRCNTDLRRNVP+DK+ +NEP++ DE
Sbjct: 61  SRDQRISEMMLIIDDVKAQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVM-DE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQ N+EALQKRNKVLTEQLLKSLDAYRSLK K+KEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKHKIKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           +G NARM+EMGLRVR GLDRIHSFKE M TQ++DEK IDIE EISALEHMFK FD EISK
Sbjct: 241 SGENARMKEMGLRVRVGLDRIHSFKE-MFTQSDDEKHIDIEHEISALEHMFKCFDLEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
           HVK+KK+PVE KH+RI AD
Sbjct: 301 HVKMKKYPVECKHERIKAD 316

[Close]

BLAST of Lsi02G009280 vs. NCBI nr
Match: XP_038895691.1 (paramyosin [Benincasa hispida])

HSP 1 Score: 563.1 bits (1450), Expect = 1.5e-156
Identity = 301/319 (94.36%), Postives = 309/319 (96.87%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES D NR RALSSPELANAL+SPR QHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG
Sbjct: 1   MESADPNRVRALSSPELANALISPR-QHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           SKDQRISEMM+I+DEVKSQIQKSQS GKR EAELRRCNTDLRRN+PKDKKTTNEPIITDE
Sbjct: 61  SKDQRISEMMLILDEVKSQIQKSQSTGKRMEAELRRCNTDLRRNLPKDKKTTNEPIITDE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           NGANARMEEMGL+VRAGL+RIHSFKEMMITQT+DEKQIDIE EISALE MFK FDFEISK
Sbjct: 241 NGANARMEEMGLQVRAGLNRIHSFKEMMITQTDDEKQIDIEHEISALEQMFKCFDFEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
           HVKIKKHPVE+K DRINAD
Sbjct: 301 HVKIKKHPVEYKPDRINAD 318

[Close]

BLAST of Lsi02G009280 vs. NCBI nr
Match: XP_008444778.1 (PREDICTED: outer dense fiber protein 2 [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.9e-152
Identity = 294/319 (92.16%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES DINR RALSSPELAN L SPR  HVDQNFVGVSTNVR+LLKLIHEYKEAS+KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFVGVSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           SK+QRISEMM IIDEVKSQI KSQS GKR+EA LRRCNTDLRRNVPKDKK TNEPIITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           NG NARMEEMG++VRAGL+RIHSFKEMMITQT+DEKQIDIEQEISALEHMFK FDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
            VKIKKHP+E KHDRINAD
Sbjct: 301 QVKIKKHPLECKHDRINAD 318

[Close]

BLAST of Lsi02G009280 vs. NCBI nr
Match: KAA0054038.1 (outer dense fiber protein 2 [Cucumis melo var. makuwa] >TYJ96885.1 outer dense fiber protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 542.0 bits (1395), Expect = 3.5e-150
Identity = 293/319 (91.85%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES DINR RALSSPELAN L SPR  HVDQNFV VSTNVR+LLKLIHEYKEAS+KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFV-VSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           SK+QRISEMM IIDEVKSQI KSQS GKR+EA LRRCNTDLRRNVPKDKK TNEPIITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           NG NARMEEMG++VRAGL+RIHSFKEMMITQT+DEKQIDIEQEISALEHMFK FDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
            VKIKKHP+E KHDRINAD
Sbjct: 301 QVKIKKHPLECKHDRINAD 317

[Close]

BLAST of Lsi02G009280 vs. NCBI nr
Match: XP_004135719.1 (uncharacterized protein LOC101212613 [Cucumis sativus] >KGN65888.1 hypothetical protein Csa_023155 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 2.2e-147
Identity = 287/320 (89.69%), Postives = 300/320 (93.75%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELAN-ALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNN 60
           MES DINR RALSSPELAN  L+SPR  H+DQNFVGVSTNVRLLLKLIHEYKE SMKGN+
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITD 120
           GSKDQRISEMM+IIDEVKSQIQKS+S GKRREAELRRCNTDLRRNVPKDKK TNEPII D
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKK-TNEPIIID 120

Query: 121 EKERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180
           EKERLRRELNASVA+RKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM
Sbjct: 121 EKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180

Query: 181 LMCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEK 240
           LMCKVQACVAEHRVKKNNVPDAQGN EALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQE+
Sbjct: 181 LMCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQER 240

Query: 241 RNGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEIS 300
           RNG NARMEEMG++VRAGL+RIHSFKEMMITQT+D+KQIDIE EISALEHMFK FDFEIS
Sbjct: 241 RNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEIS 300

Query: 301 KHVKIKKHPVEFKHDRINAD 320
           K  K+KKHPV    DRINAD
Sbjct: 301 KQTKVKKHPV----DRINAD 315

[Close]

BLAST of Lsi02G009280 vs. NCBI nr
Match: KAG7012551.1 (hypothetical protein SDJN02_25303 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509.2 bits (1310), Expect = 2.5e-140
Identity = 273/319 (85.58%), Postives = 297/319 (93.10%), Query Frame = 0


Query: 1   MESTDINRGRALSSPELANALMSPRHQHVDQNFVGVSTNVRLLLKLIHEYKEASMKGNNG 60
           MES D+ R RALS  ELANAL SPR  HVDQNFVGVSTNVRLLLKLIHEYK+AS+KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKTTNEPIITDE 120
           S+DQRISEMM+IID+VK+QIQKSQ  GK+R AELRRCNTDLRRNVP+DK+ +NEP++ DE
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVM-DE 120

Query: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEML
Sbjct: 121 KERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240
           MCKVQACVAEHRVKKNNVPDAQ N+EALQKRNKVLTEQLLKSLDAYRSLKRK+KEYQEKR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISALEHMFKGFDFEISK 300
           +G NARMEEMGLRVR GLDRIHSFKE M TQ++DEKQIDIE EISALEHMFK FD EISK
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKE-MFTQSDDEKQIDIEHEISALEHMFKCFDLEISK 300

Query: 301 HVKIKKHPVEFKHDRINAD 320
           HVK+KK+PVE KH+RINAD
Sbjct: 301 HVKMKKYPVECKHERINAD 316

[Close]

BLAST of Lsi02G009280 vs. TAIR 10
Match: AT4G03620.1 (myosin heavy chain-related )

HSP 1 Score: 206.5 bits (524), Expect = 3.3e-53
Identity = 136/318 (42.77%), Postives = 195/318 (61.32%), Query Frame = 0


Query: 2   ESTDINRGRALSSPEL-----ANALMSP----RHQ-HVDQNFVGVSTNVRLLLKLIHEYK 61
           E  +++R RA S+P+L      +   SP     HQ H D    G++TNV+LLLKL+ ++ 
Sbjct: 29  EPENMSRLRAFSAPDLVPSDSGSITSSPTRTIEHQSHEDSGLEGITTNVKLLLKLVQDHN 88

Query: 62  EASMKGNNGSKDQRISEMMVIIDEVKSQIQKSQSNGKRREAELRRCNTDLRRNVPKDKKT 121
           EA+ + ++  K QR++ MM I+D++K++IQK+Q      + ELRRC TDL+R+    K  
Sbjct: 89  EATSRHHDDWKVQRVNTMMTILDDLKTRIQKAQQQSSSGKKELRRCYTDLKRSPDLTKSP 148

Query: 122 TNEPIITDEK-ERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHV 181
           T  P    E  ++LR+EL+AS+AARKSL+ +CSS+GKEKEI+A EL+R   +L+ MEE V
Sbjct: 149 TKPPQNDPEDIQKLRKELSASMAARKSLQMMCSSLGKEKEIMALELSRKAHELNEMEELV 208

Query: 182 NDLKAQNEMLMCKVQACVAEHRVKKNNVPDAQG---NIEALQKRNKVLTEQLLKSLDAYR 241
           +D +AQNE L+ KVQ C  EH  +K    D  G   N   LQ RNK L+EQLLKS+D YR
Sbjct: 209 SDFRAQNEKLLKKVQNCAVEHNKEKKEDIDGPGPGDNNVPLQGRNKELSEQLLKSIDGYR 268

Query: 242 SLKRKLKEYQEKRNGANARMEEMGLRVRAGLDRIHSFKEMMITQTEDEKQIDIEQEISAL 301
           SLKRK K+ Q++       + +    V  G  R+    E  IT+   E +++IE EIS L
Sbjct: 269 SLKRKYKDVQDENGSMRRALRDYAEGVNVGTQRLTKLHE-KITR---EDEVNIENEISNL 328

Query: 302 EHMFKGFDFEISKHVKIK 306
           E +F+G   +I  H + K
Sbjct: 329 EKLFQGLGLKILNHSQNK 342

The following BLAST results are available for this feature:

BLAST of Lsi02G009280 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G009280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAN5	1.4e-152	92.16	outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1	[more]
A0A5A7UG72	1.7e-150	91.85	Outer dense fiber protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LVR7	1.0e-147	89.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1	[more]
A0A6J1GR77	4.7e-140	84.95	uncharacterized protein LOC111456791 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A6J1K2G4	1.2e-138	84.64	uncharacterized protein LOC111490448 OS=Cucurbita maxima OX=3661 GN=LOC111490448...	[more]

BLAST of Lsi02G009280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895691.1	1.5e-156	94.36	paramyosin [Benincasa hispida]	[more]
XP_008444778.1	2.9e-152	92.16	PREDICTED: outer dense fiber protein 2 [Cucumis melo]	[more]
KAA0054038.1	3.5e-150	91.85	outer dense fiber protein 2 [Cucumis melo var. makuwa] >TYJ96885.1 outer dense f...	[more]
XP_004135719.1	2.2e-147	89.69	uncharacterized protein LOC101212613 [Cucumis sativus] >KGN65888.1 hypothetical ...	[more]
KAG7012551.1	2.5e-140	85.58	hypothetical protein SDJN02_25303 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi02G009280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03620.1	3.3e-53	42.77	myosin heavy chain-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..253
None	No IPR available	COILS	Coil	Coil	coord: 156..176
None	No IPR available	PANTHER	PTHR38378:SF3	MYOSIN HEAVY CHAIN-LIKE PROTEIN	coord: 7..309
None	No IPR available	PANTHER	PTHR38378	MYOSIN HEAVY CHAIN-LIKE PROTEIN	coord: 7..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G009280.1	Lsi02G009280.1	mRNA