Lsi02G008810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTTTCGTTGACACGAAAATCTAGTTGGAAGAATATTCTCCAACTAGTCATTTCTGATTGTCCAAATTTCTTCTATTTTATGTTTTTTCAATCTTATTTCATACTTAAAAGAAAAAAGAAAAAAATCATTTCAGGGAGAAAACATAGATTTTTGTTTGCAAGTTTTAGCTGAATTTAGTATTCAGGTTGCCTGTGTCGAATGTATTTTCTCTTAATTTATATCTCAAATTTTCACTTAGGATCTCTCTCAATAAACAAAACAAAATTCAAATTTTCCTTTTTTAATAGGGTAAAGTATACCCAAAAAAAAAAAAAAATAAATTTTGAGATAGGTTTCAATTATGCTCCTATATTATAATAAAAAAAATTGGCGTGACAACTAATGCTTAAAATTAGAAGACATTCTAATTTCCCAAATTGGTTGATTTCCTGTTGTCTTTCTTATACTAGGAATTTTATCCTGGGGCCTAGAGATGTCAGGCCATGATTTCTTGTCTTTCTAAAAAAAAAAAAAATTAAAAGGTGTTCATAATTTACCATTATATAGAAGATTAAAGATGGTTGTTATTATTTCATCTTAAAAGATTTCGTTAAAATCATTTACAACATTAATTTTCACATATCCATAATTTTTACACACTCATCAGTTATATCAATTTACATGAATAACGTCATATTTGTCTTTCAATTTTTACCTATTAACTATCATGTCAATTTCCATCTTACTTTAACAAAAAAAAAAACAAAAACTCTGGATTTTTTTTTTAACAAGTTTGAAATTTAAATGCTTTAGTGAAACTTTGGAAATCCAGAAACATAAATAAAACCTATCCTCGGAGTTCAAGAGTATATTTAAGGCTTGTTTGGATTGACTTTCTAAGTGTTTATAAGTGCAAAAAAAAGTGTTTATAAATACTTAGAAAACAAATTCAAACGAGCTCTTAATTTGTATAATTTAACCCCTTTTTAATAATAAATATATGTGAATATATACTTAACCAATTAAGGGCATGTTTGGGACTAATTTTAAAATCGTTAAAATTACTTTTGTCATTTTTAAAATCACTCAAAAACTCACTTTAATCACTTAAAATAAATTTAATTTTCAATTTTACACTTTTAAATGCAACTTTCAATCATCAAATTAGTTTTGAAGGATTAATAACATATTTCACAGTGATTTTAAAAATGACAAAAGTGATTTTAGTCATTTTAAAATCACTTCCAAACATGTCGTAAGTTGTGCTCTTTTATCATGACAATATTTCGTAATTGTATTCGGTTATACATGAAACAGAAAATGGAGAAGAAATTAGCATGCAAGTGAGCCCTAGAAAGCAAACAAGCTCCATGAACCTAATCCAACAACAACCAAGAAGAAGCCCAAGAACCAAAGAAAATTACCAAAGATGGCTAAGAATTGGTGTATATACATTCTTGCTTCTTTCAGGCCAATCAGTGGGAGTTATGCTTGGAAGGCTTTATTTTGACAAGGGTGGCAATAGCAAATGGTTGGCAACTTTAGTTTCATTAATAGGCTTTCCCATTCTCCTTCCACTCTACATGATAAAATCACTCAAAACTTCACCTTCTAATATCACCCTCCAATCAAATTCACCCACACCTACAAAACTTGCCTTTGTTTATGTCTCTCTTGGCCTTCTTATTGCCCTTGGTTGCTTTCTTTACTCTGTGGGTCTCATGTACCTTCCTGTTTCAACTTACTCCCTTATTTGTGCCTCACAATTGGCCTTCAATGCCTTGTTTTCTTACTTCCTTAACTCCCTTGTTTTCACCCCTTTCATTGTTAACTCTCTTGTTCTCCTAACTATCTCCTCTTCTCTCCTCATCTTTCATACCGAACCCGTCTCCGATGGCTCCAACCACCCGGTTTCTAGAGCTAAGTTTGTTACAGGTAAGTTAAGGCTTTAAATTTCAAGTTAAAAAACACTTTCAGTCCCTAAACTTTAGTTGGTAAACGATTTAGTCCTTTTACTTTAATAAGTAACAATTTAGTCCATGTACTTTATATTTGGTAATGATTTAGTCTTTATTGTGAAAAATATTATTAAGATTTAATGAAATTTCTCACATATGTAGATCGATAAATTGATCGGGAATCAATTTTTTTTTATAAACTATAAAGACTAAGTCGTTTTAAATAATAAAAATTGATACTTAATTTTAAAGAGTCTTTTCATGATAGGGACTAGATTGTTACAAATTACAAAGTATAGAGACAGAAAAATTGTTATAAATTTGTAAGTACAAGGACTAAATCGTTGCCAACTAAAATTTAATGACTAAATTGTGTTACTTCTATAAAAAAATATAGGGACCAAACATATTTTTTAACCTCTTTGTAGTTAAGAGACTTTAGAGTTCAACAACATACAAAATAAGAAATTCAAACTTTTGACCTATTGAGCTATATTCAATTTATGAATAGTGTCTTAAAATTTATTAAATGATAAATATATATATTCATATGGGAGTGAAAATAACATTACAAGGATTTGAACATAGGACCTCCTACTCTGATACCATGTTAAATCAGCGACTAACCCAGAAGCTTAACTAGCTAAAAGCTTAAGTTGATGAGTTACAGTGAATTCAATTATATGAAATGATAAAAGTTTCAATGGTATTAATATGGATGAAAATATGGAGAAGTAAACGAAAAATTTTAACGTTCGATCGTGGTTAAATATTACAGGATTCGTATGCACGGTGGCGGCATCGGCAGGGTACGGGTTGATGCTATCATTGACCCAACTAGCCTTCAAGAAAGTGATAAAAAAGGAGAGTTTCAAGGCAGTAATGGACATGATAATTTACCAGTCAATGGTTGCAAGTTCAGCCATATTGATAGGGTTATTTGCAAGTGGGGAATGGAGAAGTTTGAGAAGGGAAATGGATGAGTTTCAATTGGGTAAAGTTTCATACTTAATGATTTTGCTTTGGACAACCATAAGTTGGCAACTTTTCACCATAGGCTGTGTGGGCCTAATTTTTGACGTTTCTTCTCTCTTTTCCAATGCCATTAGTGTCTTGGGTTTGCCTATTGTGCCTGTTTTTGCTGTCATTTTCTTCCATGACAAAATGGATGGACTCAAAATTGTGGCCATGATTTTGGCTGTCTGGGGTTTTGTTTCCTATGGTTATCAAAATTATCTTGATGACTTCAAGGACTCCTCTAAGGTCGAAAATCGAGACTCCAACGAGGTTTCGGCTGAGATTATTCATCTTCATCCATGATATATATATATGATCAATCACAACAGTAGATTGCTCCTCCTTTCTTAGTTCTGGTTGAATAGAGACGGAGGGACGACCCGATTCTAGATCATTAGTTAAGATATATATTCTCAACTAAGTGGTTAAAGACTCGAATAGTATTATATGTATTTATACTTTGATAGTAATCATTTGGTATATATATTATTTCGAGATAGAAATGGAAATTATTCTCCTTCATCTTGGGCTCTTTTTTTTTTTGTAAAATTAGAAATGGTACTTTGGTTTATGATTTGATTGTGTGGAAATGAATTTCTATGGGGTAGAGGATAGTGTAACTTTTGATCATTTATGCTATTTGTAAATAAATTC ATGACCATGCAAGTGAGCCCTAGAAAGCAAACAAGCTCCATGAACCTAATCCAACAACAACCAAGAAGAAGCCCAAGAACCAAAGAAAATTACCAAAGATGGCTAAGAATTGGTGTATATACATTCTTGCTTCTTTCAGGCCAATCAGTGGGAGTTATGCTTGGAAGGCTTTATTTTGACAAGGGTGGCAATAGCAAATGGTTGGCAACTTTAGTTTCATTAATAGGCTTTCCCATTCTCCTTCCACTCTACATGATAAAATCACTCAAAACTTCACCTTCTAATATCACCCTCCAATCAAATTCACCCACACCTACAAAACTTGCCTTTGTTTATGTCTCTCTTGGCCTTCTTATTGCCCTTGGTTGCTTTCTTTACTCTGTGGGTCTCATGTACCTTCCTGTTTCAACTTACTCCCTTATTTGTGCCTCACAATTGGCCTTCAATGCCTTGTTTTCTTACTTCCTTAACTCCCTTGTTTTCACCCCTTTCATTGTTAACTCTCTTGTTCTCCTAACTATCTCCTCTTCTCTCCTCATCTTTCATACCGAACCCGATTCGTATGCACGGTGGCGGCATCGGCAGGGTACGGGTTGATGCTATCATTGACCCAACTAGCCTTCAAGAAAGTGATAAAAAAGGAGAGTTTCAAGGCAGTAATGGACATGATAATTTACCAGTCAATGGTTGCAAGTTCAGCCATATTGATAGGGTTATTTGCAAGTGGGGAATGGAGAAGTTTGAGAAGGGAAATGGATGAGTTTCAATTGGGTAAAGTTTCATACTTAATGATTTTGCTTTGGACAACCATAAGTTGGCAACTTTTCACCATAGGCTGTGTGGGCCTAATTTTTGACGTTTCTTCTCTCTTTTCCAATGCCATTAGTGTCTTGGGTTTGCCTATTGTGCCTGTTTTTGCTGTCATTTTCTTCCATGACAAAATGGATGGACTCAAAATTGTGGCCATGATTTTGGCTGTCTGGGGTTTTGTTTCCTATGGTTATCAAAATTATCTTGATGACTTCAAGGACTCCTCTAAGGTCGAAAATCGAGACTCCAACGAGGTTTCGGCTGAGATTATTCATCTTCATCCATGATATATATATATGATCAATCACAACAGTAGATTGCTCCTCCTTTCTTAGTTCTGGTTGAATAGAGACGGAGGGACGACCCGATTCTAGATCATTAGTTAAGATATATATTCTCAACTAAGTGGTTAAAGACTCGAATAGTATTATATGTATTTATACTTTGATAGTAATCATTTGGTATATATATTATTTCGAGATAGAAATGGAAATTATTCTCCTTCATCTTGGGCTCTTTTTTTTTTTGTAAAATTAGAAATGGTACTTTGGTTTATGATTTGATTGTGTGGAAATGAATTTCTATGGGGTAGAGGATAGTGTAACTTTTGATCATTTATGCTATTTGTAAATAAATTC ATGACCATGCAAGTGAGCCCTAGAAAGCAAACAAGCTCCATGAACCTAATCCAACAACAACCAAGAAGAAGCCCAAGAACCAAAGAAAATTACCAAAGATGGCTAAGAATTGGTGTATATACATTCTTGCTTCTTTCAGGCCAATCAGTGGGAGTTATGCTTGGAAGGCTTTATTTTGACAAGGGTGGCAATAGCAAATGGTTGGCAACTTTAGTTTCATTAATAGGCTTTCCCATTCTCCTTCCACTCTACATGATAAAATCACTCAAAACTTCACCTTCTAATATCACCCTCCAATCAAATTCACCCACACCTACAAAACTTGCCTTTGTTTATGTCTCTCTTGGCCTTCTTATTGCCCTTGGTTGCTTTCTTTACTCTGTGGGTCTCATGTACCTTCCTGTTTCAACTTACTCCCTTATTTGTGCCTCACAATTGGCCTTCAATGCCTTGTTTTCTTACTTCCTTAACTCCCTTGTTTTCACCCCTTTCATTGTTAACTCTCTTGTTCTCCTAACTATCTCCTCTTCTCTCCTCATCTTTCATACCGAACCCGATTCGTATGCACGGTGGCGGCATCGGCAGGGTACGGGTTGA MTMQVSPRKQTSSMNLIQQQPRRSPRTKENYQRWLRIGVYTFLLLSGQSVGVMLGRLYFDKGGNSKWLATLVSLIGFPILLPLYMIKSLKTSPSNITLQSNSPTPTKLAFVYVSLGLLIALGCFLYSVGLMYLPVSTYSLICASQLAFNALFSYFLNSLVFTPFIVNSLVLLTISSSLLIFHTEPDSYARWRHRQGTG Homology
BLAST of Lsi02G008810 vs. ExPASy Swiss-Prot
Match: O49725 (Probable purine permease 10 OS=Arabidopsis thaliana OX=3702 GN=PUP10 PE=2 SV=2) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44 Identity = 94/154 (61.04%), Postives = 117/154 (75.97%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy Swiss-Prot
Match: O49726 (Purine permease 21 OS=Arabidopsis thaliana OX=3702 GN=PUP21 PE=2 SV=2) HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42 Identity = 94/156 (60.26%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy Swiss-Prot
Match: O49722 (Probable purine permease 6 OS=Arabidopsis thaliana OX=3702 GN=PUP6 PE=3 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 2.8e-39 Identity = 91/182 (50.00%), Postives = 125/182 (68.68%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy Swiss-Prot
Match: Q2V3H2 (Probable purine permease 7 OS=Arabidopsis thaliana OX=3702 GN=PUP7 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 9.9e-37 Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy Swiss-Prot
Match: Q0WRB9 (Probable purine permease 8 OS=Arabidopsis thaliana OX=3702 GN=PUP8 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 6.4e-36 Identity = 86/178 (48.31%), Postives = 118/178 (66.29%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy TrEMBL
Match: A0A0A0LUX8 (Probable purine permease OS=Cucumis sativus OX=3659 GN=Csa_1G445360 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75 Identity = 162/187 (86.63%), Postives = 171/187 (91.44%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy TrEMBL
Match: A0A1S3B9D2 (Probable purine permease OS=Cucumis melo OX=3656 GN=LOC103487612 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75 Identity = 157/184 (85.33%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy TrEMBL
Match: A0A5D3DAQ1 (Probable purine permease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00410 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.3e-75 Identity = 157/183 (85.79%), Postives = 169/183 (92.35%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy TrEMBL
Match: A0A6J1KGI5 (Probable purine permease OS=Cucurbita maxima OX=3661 GN=LOC111495569 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 8.1e-74 Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Lsi02G008810 vs. ExPASy TrEMBL
Match: A0A6J1KQI0 (Probable purine permease OS=Cucurbita maxima OX=3661 GN=LOC111495569 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 8.1e-74 Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Lsi02G008810 vs. NCBI nr
Match: XP_038877700.1 (purine permease 21-like [Benincasa hispida]) HSP 1 Score: 321.2 bits (822), Expect = 6.1e-84 Identity = 171/193 (88.60%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of Lsi02G008810 vs. NCBI nr
Match: XP_008444206.1 (PREDICTED: probable purine permease 10 [Cucumis melo]) HSP 1 Score: 291.6 bits (745), Expect = 5.2e-75 Identity = 157/184 (85.33%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of Lsi02G008810 vs. NCBI nr
Match: XP_004147439.2 (probable purine permease 10 [Cucumis sativus] >KGN65548.1 hypothetical protein Csa_020078 [Cucumis sativus]) HSP 1 Score: 291.6 bits (745), Expect = 5.2e-75 Identity = 162/187 (86.63%), Postives = 171/187 (91.44%), Query Frame = 0
BLAST of Lsi02G008810 vs. NCBI nr
Match: KAA0053971.1 (putative purine permease 10 [Cucumis melo var. makuwa] >TYK20656.1 putative purine permease 10 [Cucumis melo var. makuwa]) HSP 1 Score: 291.2 bits (744), Expect = 6.8e-75 Identity = 157/183 (85.79%), Postives = 169/183 (92.35%), Query Frame = 0
BLAST of Lsi02G008810 vs. NCBI nr
Match: XP_023519952.1 (purine permease 21-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.7 bits (735), Expect = 7.5e-74 Identity = 152/184 (82.61%), Postives = 167/184 (90.76%), Query Frame = 0
BLAST of Lsi02G008810 vs. TAIR 10
Match: AT4G18210.1 (purine permease 10 ) HSP 1 Score: 181.0 bits (458), Expect = 9.2e-46 Identity = 94/154 (61.04%), Postives = 117/154 (75.97%), Query Frame = 0
BLAST of Lsi02G008810 vs. TAIR 10
Match: AT4G18190.1 (purine permease 6 ) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40 Identity = 91/182 (50.00%), Postives = 125/182 (68.68%), Query Frame = 0
BLAST of Lsi02G008810 vs. TAIR 10
Match: AT4G18197.1 (purine permease 7 ) HSP 1 Score: 154.8 bits (390), Expect = 7.0e-38 Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = 0
BLAST of Lsi02G008810 vs. TAIR 10
Match: AT4G18195.1 (purine permease 8 ) HSP 1 Score: 152.1 bits (383), Expect = 4.6e-37 Identity = 86/178 (48.31%), Postives = 118/178 (66.29%), Query Frame = 0
BLAST of Lsi02G008810 vs. TAIR 10
Match: AT4G18205.1 (Nucleotide-sugar transporter family protein ) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-36 Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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