Lsi02G008500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G008500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr02: 7978062 .. 7978478 (+)
RNA-Seq Expression	Lsi02G008500
Synteny	Lsi02G008500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGAATTTCAGGAATCCGAAGTGATTTTCTCCGATCGCGATCACTGCCGTTACCTCCGCCGTGACGACGACGACGATTTCTTCAACTACACCTCCCGCCGCGGAATAGTTGCGGCACCGCGAAATAAGTATAATCACCGAACGATGCGCGACGGCGGCCGGCTCTCGAAGAAGGAAATCGCGAGGTCGCTTCCGGTAGGAATTCCAGAAAGAATCTGCCAGAGGATGGCGGAGGAAGACGACGACATGAACGAAGAGGAAATAATTCCGCCGCACTTAGTGGCGGAGCGACGAGTTGCCCGAAAAATGGCGTTCTCTGTTTGTACTGGCAATGGAAGGACGCTGAAAGGACGAGATTTGAGCAGAGTAAGGAATTCAATCCTTCGGATGACCGGATTCTTAGAAACGTGA

mRNA sequence

ATGGCTGAAGAATTTCAGGAATCCGAAGTGATTTTCTCCGATCGCGATCACTGCCGTTACCTCCGCCGTGACGACGACGACGATTTCTTCAACTACACCTCCCGCCGCGGAATAGTTGCGGCACCGCGAAATAAGTATAATCACCGAACGATGCGCGACGGCGGCCGGCTCTCGAAGAAGGAAATCGCGAGGTCGCTTCCGGTAGGAATTCCAGAAAGAATCTGCCAGAGGATGGCGGAGGAAGACGACGACATGAACGAAGAGGAAATAATTCCGCCGCACTTAGTGGCGGAGCGACGAGTTGCCCGAAAAATGGCGTTCTCTGTTTGTACTGGCAATGGAAGGACGCTGAAAGGACGAGATTTGAGCAGAGTAAGGAATTCAATCCTTCGGATGACCGGATTCTTAGAAACGTGA

Coding sequence (CDS)

ATGGCTGAAGAATTTCAGGAATCCGAAGTGATTTTCTCCGATCGCGATCACTGCCGTTACCTCCGCCGTGACGACGACGACGATTTCTTCAACTACACCTCCCGCCGCGGAATAGTTGCGGCACCGCGAAATAAGTATAATCACCGAACGATGCGCGACGGCGGCCGGCTCTCGAAGAAGGAAATCGCGAGGTCGCTTCCGGTAGGAATTCCAGAAAGAATCTGCCAGAGGATGGCGGAGGAAGACGACGACATGAACGAAGAGGAAATAATTCCGCCGCACTTAGTGGCGGAGCGACGAGTTGCCCGAAAAATGGCGTTCTCTGTTTGTACTGGCAATGGAAGGACGCTGAAAGGACGAGATTTGAGCAGAGTAAGGAATTCAATCCTTCGGATGACCGGATTCTTAGAAACGTGA

Protein sequence

MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

Homology

[Close]

BLAST of Lsi02G008500 vs. ExPASy TrEMBL
Match: A0A1S3B8R0 (uncharacterized protein LOC103487260 OS=Cucumis melo OX=3656 GN=LOC103487260 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.4e-54
Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GR 60
           MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  R
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRR-DDDDFFNFNSRRGIILAPPRTKYHHRTTMRDGCVR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV ERRVARKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERSLHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDLSRVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. ExPASy TrEMBL
Match: A0A5A7UU57 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002700 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54
Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GR 60
           MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  R
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRR-DDDDFFNFNSRRGIILAPPRTKYHHRTTMRDGCVR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV ERRVARKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERSFHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDLSRVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. ExPASy TrEMBL
Match: A5Y727 (Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54
Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GR 60
           MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  R
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRR-DDDDFFNFNSRRGIILAPPRTKYHHRTTMRDGCVR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV ERRVARKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERSFHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDLSRVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. ExPASy TrEMBL
Match: B0F6T1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G464560 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRD 60
           MA+EFQES++ FSD RDHCR+LRR DDDDFFN+       SRRG++A PR KY+HRTMRD
Sbjct: 1   MADEFQESDLFFSDPRDHCRHLRR-DDDDFFNFNFNSNSNSRRGVLAPPRTKYHHRTMRD 60

Query: 61  G-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTG 120
              RLSKKEI+RSLPV IPER   R  EEDDDM+E+EIIPPHLVAERRVARKMAFSVCTG
Sbjct: 61  ACVRLSKKEISRSLPVRIPERNLHRTLEEDDDMDEDEIIPPHLVAERRVARKMAFSVCTG 120

Query: 121 NGRTLKGRDLSRVRNSILRMTGFLET 139
           NGRTLKGRDLSRVRNS+LR+TGFLET
Sbjct: 121 NGRTLKGRDLSRVRNSVLRLTGFLET 145

[Close]

BLAST of Lsi02G008500 vs. ExPASy TrEMBL
Match: A0A6J1EK43 (uncharacterized protein LOC111434057 OS=Cucurbita moschata OX=3662 GN=LOC111434057 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 109/142 (76.76%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGR 60
           MAEEFQESEVIFSD DH RYL R DDD    DFFN   R G+V APRNKY  RT+RDGGR
Sbjct: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGR 99

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKK +A SLPVGIPER  +R  EE+D+M+EEE+IPPH+VAERR+A KMAFSVCTGNGRT
Sbjct: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 159

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDL RVRNSILRMTGFLET
Sbjct: 160 LKGRDLRRVRNSILRMTGFLET 181

[Close]

BLAST of Lsi02G008500 vs. NCBI nr
Match: XP_038895158.1 (uncharacterized protein LOC120083461 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 8.9e-58
Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDD---DFFNYTSRRGIVAAPRNKYNHRTMRDGGRL 60
           MAEEFQES+VIFSD  HCRYL RDDDD   DFFN+ SRRGIVAAPR KY+HRTMRDGGRL
Sbjct: 1   MAEEFQESDVIFSDSYHCRYLCRDDDDYGNDFFNFNSRRGIVAAPRIKYHHRTMRDGGRL 60

Query: 61  SKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRTL 120
           SKKEIARSLPV IPERI +R+++EDD+M+ EEI+PPHLVAERRVA KMAFSVCTGNGRTL
Sbjct: 61  SKKEIARSLPVRIPERISRRISDEDDEMDGEEIVPPHLVAERRVAGKMAFSVCTGNGRTL 120

Query: 121 KGRDLSRVRNSILRMTGFLET 139
           KGRDLSRVRNSILRMTGFLET
Sbjct: 121 KGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. NCBI nr
Match: XP_008443750.1 (PREDICTED: uncharacterized protein LOC103487260 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GR 60
           MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  R
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRR-DDDDFFNFNSRRGIILAPPRTKYHHRTTMRDGCVR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV ERRVARKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERSLHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDLSRVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. NCBI nr
Match: ABQ53634.1 (unknown [Cucumis melo] >KAA0057079.1 hypothetical protein E6C27_scaffold96G002700 [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GR 60
           MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  R
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRR-DDDDFFNFNSRRGIILAPPRTKYHHRTTMRDGCVR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV ERRVARKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERSFHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDLSRVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Lsi02G008500 vs. NCBI nr
Match: XP_023520036.1 (uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 2.8e-51
Identity = 109/142 (76.76%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGR 60
           MAEEFQESEVIFSD DH RYL R DDD    DFFN+  R G+V APRNKY  RT+RDGGR
Sbjct: 1   MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 60

Query: 61  LSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRT 120
           LSKK +A SLPVGIPER  +R  EE+D+M+EEE+IPPH+VAERR+A KMAFSVCTGNGRT
Sbjct: 61  LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 120

Query: 121 LKGRDLSRVRNSILRMTGFLET 139
           LKGRDL RVRNSILRMTGFLET
Sbjct: 121 LKGRDLRRVRNSILRMTGFLET 142

[Close]

BLAST of Lsi02G008500 vs. NCBI nr
Match: XP_004147426.1 (uncharacterized protein LOC101213935 [Cucumis sativus] >ABY56081.1 unknown [Cucumis sativus] >KGN65583.1 hypothetical protein Csa_020021 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRD 60
           MA+EFQES++ FSD RDHCR+LRR DDDDFFN+       SRRG++A PR KY+HRTMRD
Sbjct: 1   MADEFQESDLFFSDPRDHCRHLRR-DDDDFFNFNFNSNSNSRRGVLAPPRTKYHHRTMRD 60

Query: 61  G-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTG 120
              RLSKKEI+RSLPV IPER   R  EEDDDM+E+EIIPPHLVAERRVARKMAFSVCTG
Sbjct: 61  ACVRLSKKEISRSLPVRIPERNLHRTLEEDDDMDEDEIIPPHLVAERRVARKMAFSVCTG 120

Query: 121 NGRTLKGRDLSRVRNSILRMTGFLET 139
           NGRTLKGRDLSRVRNS+LR+TGFLET
Sbjct: 121 NGRTLKGRDLSRVRNSVLRLTGFLET 145

[Close]

BLAST of Lsi02G008500 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 104.8 bits (260), Expect = 5.8e-23
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKK 60
           MAEEF ESEV+FSD      L +++++  F     R        K   R  R      K 
Sbjct: 1   MAEEFDESEVVFSD-GLSSVLHKENENRLFGSDMER--------KKTRRIKRT--TTEKA 60

Query: 61  EIARSLPVGIPERICQR-MAEEDDDMNEE-------EIIPPHLVAERRV-ARKMAFSVCT 120
            ++ SLPV IPE I +R + +E+D+ +EE       E+IPPH++  RR+   +MAFSVC+
Sbjct: 61  SLSSSLPVSIPENIFRRYVGKEEDEYSEEEYSEGGGEMIPPHIMIGRRIQGGQMAFSVCS 120

Query: 121 GNGRTLKGRDLSRVRNSILRMTGFLE 138
           G+GRTLKGRDLSRVRNS+LR+TGFLE
Sbjct: 121 GSGRTLKGRDLSRVRNSVLRLTGFLE 135

[Close]

BLAST of Lsi02G008500 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 66/140 (47.14%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNY--TSRRGIVAAPRNKYNHRTMRDGGRLS 60
           M+EEF ESE+IFSD ++    RR+D ++  N      R       NK + R+       +
Sbjct: 1   MSEEFDESEIIFSD-NYFPIRRREDGNEKENNRPVDFRENSERVWNKSSRRSKTTPLPSA 60

Query: 61  KKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRV-ARKMAFSVCTGNGRTL 120
               + SLPV IP R      E  DD    ++IPPHL+  RR+   +MAFSVCTGNGRTL
Sbjct: 61  VTAFSSSLPVNIPMRRYSTEEEYSDDDGGRKMIPPHLIVGRRMEGGQMAFSVCTGNGRTL 120

Query: 121 KGRDLSRVRNSILRMTGFLE 138
           KGRDLSRVRNS+L++TGFLE
Sbjct: 121 KGRDLSRVRNSVLKLTGFLE 139

[Close]

BLAST of Lsi02G008500 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 81.3 bits (199), Expect = 6.9e-16
Identity = 56/137 (40.88%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKK 60
           M+EEFQES++IFSD+       R        YT            YN R     G    +
Sbjct: 1   MSEEFQESDIIFSDQSKISTSSR--------YT----------KLYNSRNDEKKGTRRHE 60

Query: 61  EIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVCTGNGRTLKGR 120
              ++ PV IP     R  E D    E++  PPH++ ERR+  ++AFS C     TLKGR
Sbjct: 61  TAEKTSPVRIPTNNF-RCLEWDTTEEEDDKTPPHVIIERRMKEQIAFSAC-----TLKGR 113

Query: 121 DLSRVRNSILRMTGFLE 138
           DLSR RNS+LRMTGFLE
Sbjct: 121 DLSRHRNSVLRMTGFLE 113

[Close]

BLAST of Lsi02G008500 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 61/138 (44.20%), Postives = 74/138 (53.62%), Query Frame = 0


Query: 1   MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKK 60
           M+EEFQESEVIFSD     + R+D                   NK +H    +  R S +
Sbjct: 1   MSEEFQESEVIFSDES---FTRKD-------------------NKISHNN-ENYERKSTE 60

Query: 61  EIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAE-RRVARKMAFSVCTGNGRTLKG 120
           +   S PV IP R   R  EE     E E+ PPH++ E RR   +MAFS C     TLKG
Sbjct: 61  KDKISSPVRIPSRTTIRYTEE-----EGEMTPPHVIIEKRRTEAQMAFSFC-----TLKG 105

Query: 121 RDLSRVRNSILRMTGFLE 138
           RDLSR RN++LRMTGFLE
Sbjct: 121 RDLSRHRNTVLRMTGFLE 105

[Close]

BLAST of Lsi02G008500 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-11
Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 79  AEEDDDMNEEEIIPPHLVAERRVARKM--AFSVCTGNGRTLKGRDLSRVRNSILRMTGFL 138
           A++DD+ ++  ++PPH    R++AR    +FS+C G GRTLKGRDLS+VRN++L  TGFL
Sbjct: 108 ADDDDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFL 167

The following BLAST results are available for this feature:

BLAST of Lsi02G008500 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G008500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8R0	6.4e-54	85.92	uncharacterized protein LOC103487260 OS=Cucumis melo OX=3656 GN=LOC103487260 PE=...	[more]
A0A5A7UU57	8.4e-54	85.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A5Y727	8.4e-54	85.92	Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
B0F6T1	2.3e-51	76.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G464560 PE=4 SV=1	[more]
A0A6J1EK43	5.1e-51	76.76	uncharacterized protein LOC111434057 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]

BLAST of Lsi02G008500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895158.1	8.9e-58	84.40	uncharacterized protein LOC120083461 [Benincasa hispida]	[more]
XP_008443750.1	1.3e-53	85.92	PREDICTED: uncharacterized protein LOC103487260 [Cucumis melo]	[more]
ABQ53634.1	1.7e-53	85.92	unknown [Cucumis melo] >KAA0057079.1 hypothetical protein E6C27_scaffold96G00270...	[more]
XP_023520036.1	2.8e-51	76.76	uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo]	[more]
XP_004147426.1	4.7e-51	76.71	uncharacterized protein LOC101213935 [Cucumis sativus] >ABY56081.1 unknown [Cucu...	[more]

BLAST of Lsi02G008500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34340.1	5.8e-23	46.58	Protein of unknown function, DUF584	[more]
AT1G29640.1	2.2e-22	47.14	Protein of unknown function, DUF584	[more]
AT5G45630.1	6.9e-16	40.88	Protein of unknown function, DUF584	[more]
AT4G18980.1	1.2e-15	44.20	AtS40-3	[more]
AT4G04630.1	3.0e-11	52.46	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 31..137 e-value: 7.8E-27 score: 95.1
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 1..137
None	No IPR available	PANTHER	PTHR33083:SF49	OS01G0748300 PROTEIN	coord: 1..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G008500.1	Lsi02G008500.1	mRNA