Lsi02G008050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G008050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Dof zinc finger protein
Location	chr02: 7436384 .. 7437845 (-)
RNA-Seq Expression	Lsi02G008050
Synteny	Lsi02G008050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATCAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCATCAAAGAAGAAGAAGAAGAATTAGAAGAGCCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATTCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCGGGCGGGGCCCTTCGCAACGTCCCCATCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGAACTTTTGCTGGCTTGCCAGAAAATTGTGTCTTTGATTCTTCAGGGATCGTCGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACTGCCACACAAGGCGGTTTCCGGCAAATTTTACCGGTAAAGCGGCGGAGAGATTGCCAAGATGGTCAAACTTGTTGATTATTATTCTTTCCCTCTTTTTTTCTTTTTCTTTTGTGTTAAGAACTCCGATGTGATTGAGAGGAAAAAAATGAAAAAAAGAAACGTGTTTTGATGGCGTTAGTTTAATTTGTACAAATAATAGACTTTTGTTTATAGAATTTTTGGGTAAAAGACTAATTAGCTTTTTAAAAATTCAATATGATGATTATCTTCTTCTTTTTCTTGTTTAAGTAAAACAGGTTTAAAATACAAGAATTTGAATCTCCAATTTTCAAGAAAAAAATAAAAGGGTATATATGTCAATTATCCCCTGCTAAACTAGCTACTTGAATAATAACTTCTTAAAATGGTCAAAACCATGCTTCATATGATTGATGAGATAAGACCCAATTAATTAAAGTTAATAAACATTAAGATGCCTTTATTTATTTATTTATTTATTTTGTTAAAGTACATTAAGATGCTTAATTATTGCAAGCTATCCAATTGAAAAATAGCAATAATTCTTTCCCCTCCCATCCCAAGGAAAACAACTCCAATTCTAGAACGTTAAATCACCCATCAATTCAAAAGGCAGTTGGTTATATTTCGGTAAATTTAATTACATGAATTAAATTGAAAATTAATATTAATTAGACGAGAGCTCCTGTAGATGTGAAGCCGAGTTCTCGAAGGACTTCGGTACATTGAGAAAGAGGGTTCTTAATTAGGAAGCCAAGAGTCCGGCTTGGCGGACGGGGGAGGAGATGCCATTGTTTCTAGTAAGGTCAACTTCTGCTGTTTGTTTGACGAAGCCTTCACGAGCGATCTCGTCGCAGTCGCTTCTGCTGCTCTTAATGAGAAACACTTCGCAGATATCTTGTTCGTGGTCTCCGTCCACCGGCATCCGATAGGTTCCGGTCTCGTCAGTCGTGGTGTGTGTGCTGTATGTTATGCTTTCTGTTGA

mRNA sequence

ATGATGGGTGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATCAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCATCAAAGAAGAAGAAGAAGAATTAGAAGAGCCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATTCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCGGGCGGGGCCCTTCGCAACGTCCCCATCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGAACTTTTGCTGGCTTGCCAGAAAATTGTGTCTTTGATTCTTCAGGGATCGTCGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACTGCCACACAAGGCGGTTTCCGGCAAATTTTACCGGTAAAGCGGCGGAGAGATTGCCAAGATGGAAGCCAAGAGTCCGGCTTGGCGGACGGGGGAGGAGATGCCATTGTTTCTAGTAAGGTCAACTTCTGCTGTTTGTTTGACGAAGCCTTCACGAGCGATCTCGTCGCAGTCGCTTCTGCTGCTCTTAATGAGAAACACTTCGCAGATATCTTGTTCGTGGTCTCCGTCCACCGGCATCCGATAGGTTCCGGTCTCGTCAGTCGTGGTGTGTGTGCTGTATGTTATGCTTTCTGTTGA

Coding sequence (CDS)

ATGATGGGTGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATCAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCATCAAAGAAGAAGAAGAAGAATTAGAAGAGCCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATTCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCGGGCGGGGCCCTTCGCAACGTCCCCATCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGAACTTTTGCTGGCTTGCCAGAAAATTGTGTCTTTGATTCTTCAGGGATCGTCGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACTGCCACACAAGGCGGTTTCCGGCAAATTTTACCGGTAAAGCGGCGGAGAGATTGCCAAGATGGAAGCCAAGAGTCCGGCTTGGCGGACGGGGGAGGAGATGCCATTGTTTCTAGTAAGGTCAACTTCTGCTGTTTGTTTGACGAAGCCTTCACGAGCGATCTCGTCGCAGTCGCTTCTGCTGCTCTTAATGAGAAACACTTCGCAGATATCTTGTTCGTGGTCTCCGTCCACCGGCATCCGATAGGTTCCGGTCTCGTCAGTCGTGGTGTGTGTGCTGTATGTTATGCTTTCTGTTGA

Protein sequence

MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGSQESGLADGGGDAIVSSKVNFCCLFDEAFTSDLVAVASAALNEKHFADILFVVSVHRHPIGSGLVSRGVCAVCYAFC

Homology

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BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-44
Identity = 100/171 (58.48%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 16  GIKLFGATIMLQNN--RQIIKEEEEELEEP---------NKSDQQSLEKRPEKIIPCPRC 75
           GIKLFG TI    N  + I KEE+++ ++P         + S   + EKRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 76  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAGLPEN 135
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRK+KPP R   G  E 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGFAE- 127

Query: 136 CVFDSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
                +   AV   EL+  +VEEW   AATA+ GGFR   PVKR R   DG
Sbjct: 128 --LLGAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDG 172

[Close]

BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.9e-41
Identity = 95/168 (56.55%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 16  GIKLFGATIMLQNNRQIIKEEEEELEE--------PNKSDQQSLEKRPEKIIPCPRCKSM 75
           GIKLFG TI   N R I  EEE    E         + S   + EKRP+KII CPRCKSM
Sbjct: 8   GIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSM 67

Query: 76  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAGLPENCVF 135
           +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRRK+KPP R   G+    + 
Sbjct: 68  ETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM----LG 127

Query: 136 DSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           D +G+  V+   + G +VEEW   AA A  G FR   P+KR R   DG
Sbjct: 128 DGNGVRQVE--LINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDG 167

[Close]

BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 17  IKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLE---KRPEKIIPCPRCKSMDTKFCY 76
           IKLFG  I      ++  EEEE+ +    +DQ   +   K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 77  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTK 113
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-28
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 48  QQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 107
           Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 127 QEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAG 186

Query: 108 RRKTKPP 115
           RRK K P
Sbjct: 187 RRKNKSP 193

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BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-27
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 31  QIIKEEEEELEEPNKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQ 90
           QI   +  E  +    D ++L K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQ
Sbjct: 83  QIESSDTPEDNQQTTPDGKTL-KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQ 142

Query: 91  RYWTAGGALRNVPIGAGRRKTK 113
           RYWTAGG +RNVP+GAGRRK K
Sbjct: 143 RYWTAGGTMRNVPVGAGRRKNK 163

[Close]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL
Match: A0A0A0LV52 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 3.0e-89
Identity = 164/177 (92.66%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 1   MMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKI 60
           MMGERK+  NNEDQ+EGGIKLFGATIMLQN RQIIKEEEEE EE NKSDQQSLEKRPEKI
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEENKSDQQSLEKRPEKI 60

Query: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120
           IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120

Query: 121 AGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
            GLPENCVFDSSGI V VQPFELEGMVE+WHVVAA ATQGGFRQILPVKRRRDC DG
Sbjct: 121 GGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDG 177

[Close]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 162/176 (92.05%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKI 60
           MMGERK+  NNEDQ+ GGIKLFGATIMLQN RQIIKEEEEE EE NKSDQQ+LEKRPEKI
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEE-EEANKSDQQTLEKRPEKI 60

Query: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120
           IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120

Query: 121 AGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
            GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDG
Sbjct: 121 GGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDG 175

[Close]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 162/176 (92.05%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKI 60
           MMGERK+  NNEDQ+ GGIKLFGATIMLQN RQIIKEEEEE EE NKSDQQ+LEKRPEKI
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEE-EEANKSDQQTLEKRPEKI 60

Query: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120
           IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120

Query: 121 AGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
            GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDG
Sbjct: 121 GGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDG 175

[Close]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL
Match: A0A6J1KLC9 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.9e-78
Identity = 149/174 (85.63%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKIIP 60
           MM ERK N+EDQ EGGIKLFGATIML NNR I+K      EEPN SDQQS EKRP+KIIP
Sbjct: 2   MMAERKKNDEDQ-EGGIKLFGATIMLHNNR-ILK------EEPNDSDQQSPEKRPDKIIP 61

Query: 61  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAG 120
           CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+TF G
Sbjct: 62  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGG 121

Query: 121 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A   GFRQILPVKRRR  QDG
Sbjct: 122 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAHDGFRQILPVKRRRGYQDG 166

[Close]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL
Match: A0A6J1EH23 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111434231 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.0e-77
Identity = 148/174 (85.06%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKIIP 60
           MM ERK N+ED +EGGIKLFGATIML +NR I+K      EEPN SDQQS EKRP+KIIP
Sbjct: 2   MMAERKKNDED-HEGGIKLFGATIMLHDNR-ILK------EEPNVSDQQSPEKRPDKIIP 61

Query: 61  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAG 120
           CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+TF G
Sbjct: 62  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGG 121

Query: 121 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A Q GFRQILPVKRRR  QDG
Sbjct: 122 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAQDGFRQILPVKRRRGYQDG 166

[Close]

BLAST of Lsi02G008050 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 4.7e-89
Identity = 163/176 (92.61%), Postives = 167/176 (94.89%), Query Frame = 0


Query: 1   MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEE--EEELEEPNKSDQQSLEKRPEKI 60
           MMGER+NNN    EGGIKLFG TIMLQNNRQIIKEE  EEE EEPNKSDQQSLEKRPEKI
Sbjct: 1   MMGERENNN----EGGIKLFGTTIMLQNNRQIIKEEEDEEEEEEPNKSDQQSLEKRPEKI 60

Query: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120
           IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF 120

Query: 121 AGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           AGLPENCVFDSSG+VAVQPFELEGMVEEWHVVAA ATQGGFRQ+LPVKRRRDCQDG
Sbjct: 121 AGLPENCVFDSSGMVAVQPFELEGMVEEWHVVAAAATQGGFRQMLPVKRRRDCQDG 172

[Close]

BLAST of Lsi02G008050 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 2.3e-88
Identity = 162/176 (92.05%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKI 60
           MMGERK+  NNEDQ+ GGIKLFGATIMLQN RQIIKEEEEE EE NKSDQQ+LEKRPEKI
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEE-EEANKSDQQTLEKRPEKI 60

Query: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120
           IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120

Query: 121 AGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
            GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDG
Sbjct: 121 GGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDG 175

[Close]

BLAST of Lsi02G008050 vs. NCBI nr
Match: XP_011657769.2 (dof zinc finger protein DOF1.5 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-87
Identity = 164/179 (91.62%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   MMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIIK--EEEEELEEPNKSDQQSLEKRPE 60
           MMGERK+  NNEDQ+EGGIKLFGATIMLQN RQIIK  EEEEE EE NKSDQQSLEKRPE
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFAGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           TF GLPENCVFDSSGI V VQPFELEGMVE+WHVVAA ATQGGFRQILPVKRRRDC DG
Sbjct: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDG 179

[Close]

BLAST of Lsi02G008050 vs. NCBI nr
Match: XP_023519982.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 2.8e-78
Identity = 150/174 (86.21%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKIIP 60
           MM ERK N+EDQ EGGIKLFGATIML NNR I+K      EEPN SDQQS EKRP+KIIP
Sbjct: 2   MMAERKKNDEDQ-EGGIKLFGATIMLHNNR-ILK------EEPNDSDQQSTEKRPDKIIP 61

Query: 61  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAG 120
           CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+TF G
Sbjct: 62  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGG 121

Query: 121 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A Q GFRQILPVKRRR  QDG
Sbjct: 122 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAQDGFRQILPVKRRRGYQDG 166

[Close]

BLAST of Lsi02G008050 vs. NCBI nr
Match: XP_023000934.1 (cyclic dof factor 4-like [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 149/174 (85.63%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MMGERKNNNEDQYEGGIKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLEKRPEKIIP 60
           MM ERK N+EDQ EGGIKLFGATIML NNR I+K      EEPN SDQQS EKRP+KIIP
Sbjct: 2   MMAERKKNDEDQ-EGGIKLFGATIMLHNNR-ILK------EEPNDSDQQSPEKRPDKIIP 61

Query: 61  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAG 120
           CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+TF G
Sbjct: 62  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGG 121

Query: 121 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A   GFRQILPVKRRR  QDG
Sbjct: 122 LPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAHDGFRQILPVKRRRGYQDG 166

[Close]

BLAST of Lsi02G008050 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 181.4 bits (459), Expect = 8.9e-46
Identity = 100/171 (58.48%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 16  GIKLFGATIMLQNN--RQIIKEEEEELEEP---------NKSDQQSLEKRPEKIIPCPRC 75
           GIKLFG TI    N  + I KEE+++ ++P         + S   + EKRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 76  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAGLPEN 135
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRK+KPP R   G  E 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGFAE- 127

Query: 136 CVFDSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
                +   AV   EL+  +VEEW   AATA+ GGFR   PVKR R   DG
Sbjct: 128 --LLGAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDG 172

[Close]

BLAST of Lsi02G008050 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 170.2 bits (430), Expect = 2.1e-42
Identity = 95/168 (56.55%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 16  GIKLFGATIMLQNNRQIIKEEEEELEE--------PNKSDQQSLEKRPEKIIPCPRCKSM 75
           GIKLFG TI   N R I  EEE    E         + S   + EKRP+KII CPRCKSM
Sbjct: 8   GIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSM 67

Query: 76  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFAGLPENCVF 135
           +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRRK+KPP R   G+    + 
Sbjct: 68  ETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM----LG 127

Query: 136 DSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDG 175
           D +G+  V+   + G +VEEW   AA A  G FR   P+KR R   DG
Sbjct: 128 DGNGVRQVE--LINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDG 167

[Close]

BLAST of Lsi02G008050 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 17  IKLFGATIMLQNNRQIIKEEEEELEEPNKSDQQSLE---KRPEKIIPCPRCKSMDTKFCY 76
           IKLFG  I      ++  EEEE+ +    +DQ   +   K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 77  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTK 113
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of Lsi02G008050 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 48  QQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 107
           Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 127 QEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAG 186

Query: 108 RRKTKPP 115
           RRK K P
Sbjct: 187 RRKNKSP 193

[Close]

BLAST of Lsi02G008050 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 48  QQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 107
           Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 127 QEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAG 186

Query: 108 RRKTKPP 115
           RRK K P
Sbjct: 187 RRKNKSP 193

The following BLAST results are available for this feature:

BLAST of Lsi02G008050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.3e-44	58.48	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	2.9e-41	56.55	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q8W1E3	1.5e-29	60.61	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q93ZL5	6.2e-28	76.12	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	6.9e-27	65.85	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Lsi02G008050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV52	3.0e-89	92.66	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE...	[more]
A0A5A7UQX1	1.1e-88	92.05	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B895	1.1e-88	92.05	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A6J1KLC9	8.9e-78	85.63	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1	[more]
A0A6J1EH23	2.0e-77	85.06	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143423...	[more]

BLAST of Lsi02G008050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895022.1	4.7e-89	92.61	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_008443229.1	2.3e-88	92.05	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
XP_011657769.2	2.0e-87	91.62	dof zinc finger protein DOF1.5 [Cucumis sativus]	[more]
XP_023519982.1	2.8e-78	86.21	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000934.1	1.8e-77	85.63	cyclic dof factor 4-like [Cucurbita maxima]	[more]

BLAST of Lsi02G008050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	8.9e-46	58.48	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	2.1e-42	56.55	Dof-type zinc finger DNA-binding family protein	[more]
AT5G62430.1	1.1e-30	60.61	cycling DOF factor 1	[more]
AT5G39660.1	4.4e-29	76.12	cycling DOF factor 2	[more]
AT5G39660.2	4.4e-29	76.12	cycling DOF factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 57..112 e-value: 1.3E-31 score: 108.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 61..97
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 59..113 score: 28.360073
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 13..173
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 13..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G008050.1	Lsi02G008050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity